diff lexmapr.xml @ 0:f298f3e5c515

"planemo upload"
author cstrittmatter
date Mon, 27 Jun 2022 17:48:55 -0400
parents
children 9fec74a7e2af
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/lexmapr.xml	Mon Jun 27 17:48:55 2022 -0400
@@ -0,0 +1,28 @@
+<tool id="lexmapr" name="lexmapr" version="2.0">
+    <description></description>
+    <macros>
+        <import>macros.xml</import>
+    </macros>
+    <requirements>
+      <requirement type="package" version="@TOOL_VERSION@">lexmapr</requirement>
+      <requirement type="package" version="3">python</requirement>
+    </requirements>
+    <version_command>lexmapr --version</version_command>
+    <command detect_errors="exit_code"><![CDATA[cat ${input} > input.csv  && lexmapr2.py ./input.csv > ${output}]]></command>
+    <inputs>
+      <param name="input" type="data" format="csv"/>
+    </inputs>
+    <outputs>
+        <data name="output" format="tabular"/>
+    </outputs>
+    <tests>
+        <test>
+            <param name="input" value="small_simple_input.csv"/>
+            <output name="output" file="small_simple_output.tsv"/>
+        </test>
+    </tests>
+    <help><![CDATA[
+    ]]></help>
+    <citations>
+    </citations>
+</tool>