test_galtrakr_eurl_vtec_wgs_pt_23: data/amrfinder/changes.txt annotate

annotate data/amrfinder/changes.txt @ 1:5224b4d51065 tip

"planemo upload commit cb65588391944306ff3cb32a23e1c28f65122014-dirty"

author	cstrittmatter
date	Fri, 11 Mar 2022 15:52:43 -0500
parents	8be2feb96994
children

rev	line source
cstrittmatter@0	1 ---------------------------------------------------------------------
cstrittmatter@0	2 Changes included in 2020-01-06.1
cstrittmatter@0	3 ---------------------------------------------------------------------
cstrittmatter@0	4
cstrittmatter@0	5 This update includes backward incompatible changes to the AMRFinderPlus
cstrittmatter@0	6 database format. It is compatible with AMRFinderPlus version 3.6. To use
cstrittmatter@0	7 this database version please update to AMRFinderPlus version 3.6.
cstrittmatter@0	8 See https://github.com/ncbi/amr/wiki/Upgrading for how to upgrade and
cstrittmatter@0	9 https://github.com/evolarjun/amr/wiki/AMRFinderPlus-database for information
cstrittmatter@0	10 on the new database format.
cstrittmatter@0	11
cstrittmatter@0	12 Some highlights:
cstrittmatter@0	13
cstrittmatter@0	14 - Database format has changed to allow AMRFinderPlus to detect promoter mutations and small indels
cstrittmatter@0	15
cstrittmatter@0	16 - Many new point mutations, including Escherichia ampC promoter mutations, Klebsiella, and Enterococcus mutations
cstrittmatter@0	17
cstrittmatter@0	18 - Small improvements to many product names
cstrittmatter@0	19
cstrittmatter@0	20 - Improvements in class and subclass phenotype designations
cstrittmatter@0	21
cstrittmatter@0	22 - Modifications and additions of a few HMMs
cstrittmatter@0	23
cstrittmatter@0	24 - The usual addition of new alleles submitted to NCBI and others gleaned from the
cstrittmatter@0	25 literature
cstrittmatter@0	26
cstrittmatter@0	27
cstrittmatter@0	28
cstrittmatter@0	29 - Protein and point mutations:
cstrittmatter@0	30 Total in prev: 6443
cstrittmatter@0	31 Total in release: 6622
cstrittmatter@0	32 Removed: 0
cstrittmatter@0	33 Added: 184
cstrittmatter@0	34 Protein Added: ABV01310.1 ltcA heat-labile_enterotoxin_LT_subunit_A
cstrittmatter@0	35 Protein Added: ADE89421.1 sslE lipoprotein_metalloprotease_SslE
cstrittmatter@0	36 Protein Added: ASK37426.1 aar AggR-activated_transcriptional_regulator_Aar
cstrittmatter@0	37 Protein Added: BAB41547.1 mepA multidrug_efflux_MATE_transporter_MepA
cstrittmatter@0	38 Protein Added: WP_000378442.1 emrR multidrug_efflux_transporter_EmrAB_transcriptional_repressor_EmrR
cstrittmatter@0	39 Protein Added: WP_001132507.1 acrB multidrug_efflux_RND_transporter_permease_subunit_AcrB
cstrittmatter@0	40 Protein Added: WP_002289153.1 liaR response_regulator_transcription_factor_LiaR
cstrittmatter@0	41 Protein Added: WP_002289154.1 liaS sensor_histidine_kinase_LiaS
cstrittmatter@0	42 Protein Added: WP_002289473.1 cls cardiolipin_synthase_Cls
cstrittmatter@0	43 Protein Added: WP_002295408.1 liaF three-component_signaling_pathway_regulator_LiaF
cstrittmatter@0	44 Protein Added: WP_002355137.1 liaR response_regulator_transcription_factor_LiaR
cstrittmatter@0	45 Protein Added: WP_002356022.1 yybT cyclic_dinucleotide_phosphodiesterase_YybT
cstrittmatter@0	46 Protein Added: WP_002365182.1 liaS sensor_histidine_kinase_LiaS
cstrittmatter@0	47 Protein Added: WP_002371880.1 parC DNA_topoisomerase_IV_subunit_A_ParC
cstrittmatter@0	48 Protein Added: WP_002381168.1 liaF three-component_signaling_pathway_regulator_LiaF
cstrittmatter@0	49 Protein Added: WP_002389492.1 gshF bifunctional_glutamate--cysteine_ligase/glutathione_synthetase_GshF
cstrittmatter@0	50 Protein Added: WP_002413481.1 cls cardiolipin_synthase_Cls
cstrittmatter@0	51 Protein Added: WP_002895659.1 pmrA two-component_system_response_regulator_PmrA
cstrittmatter@0	52 Protein Added: WP_002911375.1:47:mgrB_W47R mgrB PhoP/PhoQ_regulator_MgrB
cstrittmatter@0	53 Protein Added: WP_004147969.1 phoQ two-component_system_sensor_histidine_kinase_PhoQ
cstrittmatter@0	54 Protein Added: WP_004150807.1 phoP two-component_system_response_regulator_PhoP
cstrittmatter@0	55 Protein Added: WP_004179093.1 pmrB two-component_system_sensor_histidine_kinase_PmrB
cstrittmatter@0	56 Protein Added: WP_004184324.1 crrB HAMP_domain-containing_histidine_kinase_CrrB
cstrittmatter@0	57 Protein Added: WP_014906821.1 arnC undecaprenyl-phosphate_4-deoxy-4-formamido-L-arabinose_transferase_ArnC
cstrittmatter@0	58 Protein Added: WP_033554192.1 parE DNA_topoisomerase_IV_subunit_B_ParE
cstrittmatter@0	59 Protein Added: WP_033785346.1 gyrA DNA_gyrase_subunit_A_GyrA
cstrittmatter@0	60 Protein Added: WP_048324114.1 blaOKP-B-45 class_A_broad-spectrum_beta-lactamase_OKP-B-45
cstrittmatter@0	61 Protein Added: WP_049003700.1 blaOKP-B-41 class_A_broad-spectrum_beta-lactamase_OKP-B-41
cstrittmatter@0	62 Protein Added: WP_057012521.1 blaPFM-2 subclass_B2_metallo-beta-lactamase_PFM-2
cstrittmatter@0	63 Protein Added: WP_060573544.1 blaACT-77 cephalosporin-hydrolyzing_class_C_beta-lactamase_ACT-77
cstrittmatter@0	64 Protein Added: WP_060655783.1 blaOKP-B-36 class_A_broad-spectrum_beta-lactamase_OKP-B-36
cstrittmatter@0	65 Protein Added: WP_064183695.1 blaOKP-B-16 class_A_broad-spectrum_beta-lactamase_OKP-B-16
cstrittmatter@0	66 Protein Added: WP_080897395.1 blaOKP-D-1 class_A_broad-spectrum_beta-lactamase_OKP-D-1
cstrittmatter@0	67 Protein Added: WP_086259262.1 acrB multidrug_efflux_RND_transporter_permease_subunit_AcrB
cstrittmatter@0	68 Protein Added: WP_087771722.1 blaOKP-B-34 class_A_broad-spectrum_beta-lactamase_OKP-B-34
cstrittmatter@0	69 Protein Added: WP_087833272.1 blaOKP-B-21 class_A_broad-spectrum_beta-lactamase_OKP-B-21
cstrittmatter@0	70 Protein Added: WP_100886243.1 blaOXA-895 OXA-229_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-895
cstrittmatter@0	71 Protein Added: WP_101982161.1 parC DNA_topoisomerase_IV_subunit_A_ParC
cstrittmatter@0	72 Protein Added: WP_114508147.1 blaOKP-B-40 class_A_broad-spectrum_beta-lactamase_OKP-B-40
cstrittmatter@0	73 Protein Added: WP_115256011.1 parC DNA_topoisomerase_IV_subunit_A_ParC
cstrittmatter@0	74 Protein Added: WP_117036963.1 gyrA DNA_gyrase_subunit_A_GyrA
cstrittmatter@0	75 Protein Added: WP_122543028.1 blaOKP-B-22 class_A_broad-spectrum_beta-lactamase_OKP-B-22
cstrittmatter@0	76 Protein Added: WP_125353308.1 qnrB96 quinolone_resistance_pentapeptide_repeat_protein_QnrB96
cstrittmatter@0	77 Protein Added: WP_130202201.1 blaVIM-69 subclass_B1_metallo-beta-lactamase_VIM-69
cstrittmatter@0	78 Protein Added: WP_131419583.1 blaTEM-238 class_A_beta-lactamase_TEM-238
cstrittmatter@0	79 Protein Added: WP_136034107.1 blaOKP-C-1 class_A_broad-spectrum_beta-lactamase_OKP-C-1
cstrittmatter@0	80 Protein Added: WP_137277832.1 gyrA DNA_gyrase_subunit_A_GyrA
cstrittmatter@0	81 Protein Added: WP_156404644.1 blaADC-221 class_C_beta-lactamase_ADC-221
cstrittmatter@0	82 Protein Added: WP_156404645.1 blaCMH-6 class_C_beta-lactamase_CMH-6
cstrittmatter@0	83 Protein Added: WP_156404646.1 blaCMY-168 class_C_beta-lactamase_CMY-168
cstrittmatter@0	84 Protein Added: WP_156404647.1 blaCMY-169 class_C_beta-lactamase_CMY-169
cstrittmatter@0	85 Protein Added: WP_156404648.1 blaCMY-170 class_C_beta-lactamase_CMY-170
cstrittmatter@0	86 Protein Added: WP_156404649.1 blaCTX-M-143 class_A_extended-spectrum_beta-lactamase_CTX-M-143
cstrittmatter@0	87 Protein Added: WP_156404650.1 blaCTX-M-230 class_A_extended-spectrum_beta-lactamase_CTX-M-230
cstrittmatter@0	88 Protein Added: WP_156404651.1 blaCTX-M-231 class_A_extended-spectrum_beta-lactamase_CTX-M-231
cstrittmatter@0	89 Protein Added: WP_156404652.1 blaCTX-M-232 class_A_extended-spectrum_beta-lactamase_CTX-M-232
cstrittmatter@0	90 Protein Added: WP_156404653.1 blaCTX-M-233 class_A_extended-spectrum_beta-lactamase_CTX-M-233
cstrittmatter@0	91 Protein Added: WP_156404654.1 blaMOX-14 CMY-1/MOX_family_class_C_beta-lactamase_MOX-14
cstrittmatter@0	92 Protein Added: WP_156404655.1 blaNDM-26 subclass_B1_metallo-beta-lactamase_NDM-26
cstrittmatter@0	93 Protein Added: WP_156404656.1 blaNDM-29 subclass_B1_metallo-beta-lactamase_NDM-29
cstrittmatter@0	94 Protein Added: WP_156404657.1 blaOKP-B-24 class_A_broad-spectrum_beta-lactamase_OKP-B-24
cstrittmatter@0	95 Protein Added: WP_156404658.1 blaOXA-896 class_D_beta-lactamase_OXA-896
cstrittmatter@0	96 Protein Added: WP_156404659.1 blaPER-14 class_A_extended-spectrum_beta-lactamase_PER-14
cstrittmatter@0	97 Protein Added: WP_156404660.1 blaPFM-3 subclass_B2_metallo-beta-lactamase_PFM-3
cstrittmatter@0	98 Protein Added: WP_156404661.1 blaSHV-115 class_A_extended-spectrum_beta-lactamase_SHV-115
cstrittmatter@0	99 Protein Added: WP_156404662.1 blaVEB-23 class_A_extended-spectrum_beta-lactamase_VEB-23
cstrittmatter@0	100 Protein Added: WP_156404663.1 blaVEB-24 class_A_extended-spectrum_beta-lactamase_VEB-24
cstrittmatter@0	101
cstrittmatter@0	102 Changes to existing protein and point mutation records:
cstrittmatter@0	103 Changed mepA accesssion: Q7A7N0.1 -> BAB41547.1
cstrittmatter@0	104 Changed ltcA accession: ABV01314.1 -> ABV01310.1
cstrittmatter@0	105 Changed aar accession: AVL28824.1 -> ASK37426.1
cstrittmatter@0	106 Changed reference sequence for Escherichia parE point mutations: WP_000195296.1 -> WP_033554192.1
cstrittmatter@0	107 Changed reference sequence for Escherichia acrB point mutations: WP_097509477.1 -> WP_086259262.1
cstrittmatter@0	108
cstrittmatter@0	109 16S_A1055G NC_000913.3
cstrittmatter@0	110 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	111 genbank_strand_orientation -> +
cstrittmatter@0	112 16S_A1408G NC_000913.3
cstrittmatter@0	113 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	114 genbank_strand_orientation -> +
cstrittmatter@0	115 subclass AMINOGLYCOSIDE -> GENTAMICIN C/NEOMYCIN/PAROMOMYCIN
cstrittmatter@0	116 16S_A1499G NC_000913.3
cstrittmatter@0	117 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	118 genbank_strand_orientation -> +
cstrittmatter@0	119 16S_A1519C NC_000913.3
cstrittmatter@0	120 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	121 genbank_strand_orientation -> +
cstrittmatter@0	122 16S_A1519G NC_000913.3
cstrittmatter@0	123 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	124 genbank_strand_orientation -> +
cstrittmatter@0	125 16S_A1519T NC_000913.3
cstrittmatter@0	126 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	127 genbank_strand_orientation -> +
cstrittmatter@0	128 16S_A523C NC_000913.3
cstrittmatter@0	129 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	130 genbank_strand_orientation -> +
cstrittmatter@0	131 16S_A794G NC_000913.3
cstrittmatter@0	132 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	133 genbank_strand_orientation -> +
cstrittmatter@0	134 16S_A794T NC_000913.3
cstrittmatter@0	135 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	136 genbank_strand_orientation -> +
cstrittmatter@0	137 16S_A964G NC_000913.3
cstrittmatter@0	138 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	139 genbank_strand_orientation -> +
cstrittmatter@0	140 16S_C1054T NC_000913.3
cstrittmatter@0	141 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	142 genbank_strand_orientation -> +
cstrittmatter@0	143 16S_C1065T NC_003197.2
cstrittmatter@0	144 genbank_nucleotide_accession -> AE006468.2
cstrittmatter@0	145 genbank_strand_orientation -> +
cstrittmatter@0	146 16S_C1066T NC_000913.3
cstrittmatter@0	147 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	148 genbank_strand_orientation -> +
cstrittmatter@0	149 16S_C1192T NC_000913.3
cstrittmatter@0	150 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	151 genbank_strand_orientation -> +
cstrittmatter@0	152 16S_C1192T NC_003197.2
cstrittmatter@0	153 genbank_nucleotide_accession -> AE006468.2
cstrittmatter@0	154 genbank_strand_orientation -> +
cstrittmatter@0	155 16S_C528T NC_000913.3
cstrittmatter@0	156 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	157 genbank_strand_orientation -> +
cstrittmatter@0	158 16S_G1053A NC_000913.3
cstrittmatter@0	159 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	160 genbank_strand_orientation -> +
cstrittmatter@0	161 16S_G1058C NC_000913.3
cstrittmatter@0	162 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	163 genbank_strand_orientation -> +
cstrittmatter@0	164 16S_G1064A NC_000913.3
cstrittmatter@0	165 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	166 genbank_strand_orientation -> +
cstrittmatter@0	167 subclass KANAMYCIN -> SPECTINOMYCIN
cstrittmatter@0	168 16S_G1064C NC_000913.3
cstrittmatter@0	169 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	170 genbank_strand_orientation -> +
cstrittmatter@0	171 16S_G1064T NC_000913.3
cstrittmatter@0	172 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	173 genbank_strand_orientation -> +
cstrittmatter@0	174 16S_G1068A NC_000913.3
cstrittmatter@0	175 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	176 genbank_strand_orientation -> +
cstrittmatter@0	177 16S_G527T NC_000913.3
cstrittmatter@0	178 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	179 genbank_strand_orientation -> +
cstrittmatter@0	180 16S_G926A NC_000913.3
cstrittmatter@0	181 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	182 genbank_strand_orientation -> +
cstrittmatter@0	183 16S_G926C NC_000913.3
cstrittmatter@0	184 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	185 genbank_strand_orientation -> +
cstrittmatter@0	186 16S_G926T NC_000913.3
cstrittmatter@0	187 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	188 genbank_strand_orientation -> +
cstrittmatter@0	189 16S_T1406A NC_000913.3
cstrittmatter@0	190 class AMINOGLYCOSIDE -> AMINGLYCOSIDE
cstrittmatter@0	191 genbank_nucleotide_accession -> U00096.3
cstrittmatter@0	192 genbank_strand_orientation -> +
cstrittmatter@0	193 subclass G418 -> G418/TOBRAMYCIN
cstrittmatter@0	194 23S_A2058G NC_004431.1
cstrittmatter@0	195 genbank_nucleotide_accession -> AE014075.1
cstrittmatter@0	196 genbank_strand_orientation -> +
cstrittmatter@0	197 subclass MACROLIDE -> AZITHROMYCIN/ERYTHROMYCIN/TELITHROMYCIN
cstrittmatter@0	198 23S_A2058T NC_004431.1
cstrittmatter@0	199 genbank_nucleotide_accession -> AE014075.1
cstrittmatter@0	200 genbank_strand_orientation -> +
cstrittmatter@0	201 subclass MACROLIDE -> AZITHROMYCIN/ERYTHROMYCIN/TELITHROMYCIN
cstrittmatter@0	202 23S_A2074C NC_002163.1
cstrittmatter@0	203 genbank_nucleotide_accession -> AL111168.1
cstrittmatter@0	204 genbank_strand_orientation -> +
cstrittmatter@0	205 23S_A2074G NC_002163.1
cstrittmatter@0	206 genbank_nucleotide_accession -> AL111168.1
cstrittmatter@0	207 genbank_strand_orientation -> +
cstrittmatter@0	208 23S_A2074T NC_002163.1
cstrittmatter@0	209 genbank_nucleotide_accession -> AL111168.1
cstrittmatter@0	210 genbank_strand_orientation -> +
cstrittmatter@0	211 23S_A2075G NC_002163.1
cstrittmatter@0	212 genbank_nucleotide_accession -> AL111168.1
cstrittmatter@0	213 genbank_strand_orientation -> +
cstrittmatter@0	214 23S_C2611T NC_004431.1
cstrittmatter@0	215 genbank_nucleotide_accession -> AE014075.1
cstrittmatter@0	216 genbank_strand_orientation -> +
cstrittmatter@0	217 subclass MACROLIDE -> ERYTHROMYCIN/TELITHROMYCIN
cstrittmatter@0	218 23S_C2627A NC_002163.1
cstrittmatter@0	219 genbank_nucleotide_accession -> AL111168.1
cstrittmatter@0	220 genbank_strand_orientation -> +
cstrittmatter@0	221 23S_G2032A NC_004431.1
cstrittmatter@0	222 class MACROLIDE/OXAZOLIDINONE -> LINCOSAMIDE/OXAZOLIDINONE
cstrittmatter@0	223 genbank_nucleotide_accession -> AE014075.1
cstrittmatter@0	224 genbank_strand_orientation -> +
cstrittmatter@0	225 subclass MACROLIDE/OXAZOLIDINONE -> CLINDAMYCIN/LINEZOLID
cstrittmatter@0	226 23S_G2032C NC_004431.1
cstrittmatter@0	227 genbank_nucleotide_accession -> AE014075.1
cstrittmatter@0	228 genbank_strand_orientation -> +
cstrittmatter@0	229 subclass OXAZOLIDINONE -> LINEZOLID
cstrittmatter@0	230 23S_G2032T NC_004431.1
cstrittmatter@0	231 genbank_nucleotide_accession -> AE014075.1
cstrittmatter@0	232 genbank_strand_orientation -> +
cstrittmatter@0	233 subclass MACROLIDE/OXAZOLIDINONE -> CLARITHROMYCIN/LINEZOLID
cstrittmatter@0	234 23S_G2057A NC_004431.1
cstrittmatter@0	235 class MACROLIDE/PHENICOL -> MULTIDRUG
cstrittmatter@0	236 genbank_nucleotide_accession -> AE014075.1
cstrittmatter@0	237 genbank_strand_orientation -> +
cstrittmatter@0	238 subclass MACROLIDE/CHLORAMPHENICOL -> CHLORAMPHENICOL/ERYTHROMYCIN/TELITHROMYCIN
cstrittmatter@0	239 23S_G2447T NC_004431.1
cstrittmatter@0	240 genbank_nucleotide_accession -> AE014075.1
cstrittmatter@0	241 genbank_strand_orientation -> +
cstrittmatter@0	242 subclass OXAZOLIDINONE -> LINEZOLID
cstrittmatter@0	243 23S_T754A NC_004431.1
cstrittmatter@0	244 genbank_nucleotide_accession -> AE014075.1
cstrittmatter@0	245 genbank_strand_orientation -> +
cstrittmatter@0	246 subclass MACROLIDE -> ERYTHROMYCIN/TELITHROMYCIN
cstrittmatter@0	247 50S_L22_A103C WP_002851214.1
cstrittmatter@0	248 genbank_protein_accession -> CAL35796.1
cstrittmatter@0	249 50S_L22_A103V WP_002779996.1
cstrittmatter@0	250 genbank_protein_accession -> AJW59082.1
cstrittmatter@0	251 50S_L22_A103V WP_002851214.1
cstrittmatter@0	252 genbank_protein_accession -> CAL35796.1
cstrittmatter@0	253 50S_L22_A84D WP_002779996.1
cstrittmatter@0	254 genbank_protein_accession -> AJW59082.1
cstrittmatter@0	255 50S_L22_A84D WP_002851214.1
cstrittmatter@0	256 genbank_protein_accession -> CAL35796.1
cstrittmatter@0	257 50S_L22_A88E WP_002779996.1
cstrittmatter@0	258 genbank_protein_accession -> AJW59082.1
cstrittmatter@0	259 50S_L22_A88E WP_002851214.1
cstrittmatter@0	260 genbank_protein_accession -> CAL35796.1
cstrittmatter@0	261 50S_L22_G86E WP_002779996.1
cstrittmatter@0	262 genbank_protein_accession -> AJW59082.1
cstrittmatter@0	263 50S_L22_G86E WP_002851214.1
cstrittmatter@0	264 genbank_protein_accession -> CAL35796.1
cstrittmatter@0	265 50S_L22_G86V WP_002779996.1
cstrittmatter@0	266 genbank_protein_accession -> AJW59082.1
cstrittmatter@0	267 50S_L22_G86V WP_002851214.1
cstrittmatter@0	268 genbank_protein_accession -> CAL35796.1
cstrittmatter@0	269 astA AAA20885.1
cstrittmatter@0	270 class VIRULENCE ->
cstrittmatter@0	271 subclass astA ->
cstrittmatter@0	272 arsB AAA21095.1
cstrittmatter@0	273 blacklisted_taxa Escherichia ->
cstrittmatter@0	274 arsC AAA21096.1
cstrittmatter@0	275 blacklisted_taxa Escherichia ->
cstrittmatter@0	276 arsB AAA25637.1
cstrittmatter@0	277 blacklisted_taxa Staphylococcus ->
cstrittmatter@0	278 arsB AAA27588.1
cstrittmatter@0	279 blacklisted_taxa Staphylococcus ->
cstrittmatter@0	280 arsC AAB09628.1
cstrittmatter@0	281 blacklisted_taxa Escherichia ->
cstrittmatter@0	282 ehxA AAC24352.1
cstrittmatter@0	283 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	284 astA AAD43578.1
cstrittmatter@0	285 class VIRULENCE ->
cstrittmatter@0	286 subclass astA ->
cstrittmatter@0	287 astA AAD43579.1
cstrittmatter@0	288 class VIRULENCE ->
cstrittmatter@0	289 subclass astA ->
cstrittmatter@0	290 astA AAM88299.1
cstrittmatter@0	291 class VIRULENCE ->
cstrittmatter@0	292 subclass astA ->
cstrittmatter@0	293 ehxA AAZ76497.1
cstrittmatter@0	294 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	295 ehxA ABQ02442.1
cstrittmatter@0	296 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	297 ehxA ABQ02443.1
cstrittmatter@0	298 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	299 ehxA ABQ02445.1
cstrittmatter@0	300 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	301 ehxA ABQ02447.1
cstrittmatter@0	302 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	303 ehxA ABQ02448.1
cstrittmatter@0	304 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	305 emrD3 ABQ18953.1
cstrittmatter@0	306 blacklisted_taxa Vibrio_cholerae ->
cstrittmatter@0	307 kdeA ABR76310.1
cstrittmatter@0	308 blacklisted_taxa Klebsiella ->
cstrittmatter@0	309 class -> EFFLUX
cstrittmatter@0	310 subclass -> EFFLUX
cstrittmatter@0	311 ehxA ACL51961.1
cstrittmatter@0	312 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	313 emrD ACN65732.1
cstrittmatter@0	314 class -> EFFLUX
cstrittmatter@0	315 subclass -> EFFLUX
cstrittmatter@0	316 amvA ACQ82816.1
cstrittmatter@0	317 class -> EFFLUX
cstrittmatter@0	318 subclass -> EFFLUX
cstrittmatter@0	319 astA ADI59685.1
cstrittmatter@0	320 class VIRULENCE ->
cstrittmatter@0	321 subclass astA ->
cstrittmatter@0	322 ehxA ADZ45128.1
cstrittmatter@0	323 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	324 asr BAA15331.2
cstrittmatter@0	325 blacklisted_taxa Escherichia ->
cstrittmatter@0	326 arsB BAA24823.1
cstrittmatter@0	327 blacklisted_taxa Escherichia ->
cstrittmatter@0	328 arsC BAA24824.1
cstrittmatter@0	329 blacklisted_taxa Escherichia, Klebsiella ->
cstrittmatter@0	330 ehxA BAA31774.1
cstrittmatter@0	331 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	332 fieF BAB89353.1
cstrittmatter@0	333 blacklisted_taxa Klebsiella ->
cstrittmatter@0	334 fieF BAE77395.1
cstrittmatter@0	335 blacklisted_taxa Escherichia, Salmonella ->
cstrittmatter@0	336 emrD BAE77620.1
cstrittmatter@0	337 blacklisted_taxa Escherichia ->
cstrittmatter@0	338 class -> EFFLUX
cstrittmatter@0	339 subclass -> EFFLUX
cstrittmatter@0	340 arsR BAE77793.1
cstrittmatter@0	341 blacklisted_taxa Escherichia ->
cstrittmatter@0	342 ehxA CAA63849.1
cstrittmatter@0	343 product_name enterohemolysin -> enterohemolysin EhxA
cstrittmatter@0	344 emrD EFF04178.1
cstrittmatter@0	345 class -> EFFLUX
cstrittmatter@0	346 subclass -> EFFLUX
cstrittmatter@0	347 silF KGL71342.1
cstrittmatter@0	348 product_name Ag(+)/Cu(+) efflux RND transporter periplasmic metallochaperone SilF -> Cu(+)/Ag(+) efflux RND transporter periplasmic metallochaperone SilF
cstrittmatter@0	349 dfrA18 WP_001031075.1
cstrittmatter@0	350 product_name trimethoprim-resistant dihydrofolate reductase Dfr18 -> trimethoprim-resistant dihydrofolate reductase DfrA18
cstrittmatter@0	351 mphK WP_003246254.1
cstrittmatter@0	352 product_name macrolide 2'-phosphotransferase MphJ -> macrolide 2'-phosphotransferase MphK
cstrittmatter@0	353 blaOKP-B-6 WP_004205995.1
cstrittmatter@0	354 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	355 ampC WP_006178946.1
cstrittmatter@0	356 product_name CMY2/MIR/ACT/EC family class c beta-lactamase -> CMY2/MIR/ACT/EC family class C beta-lactamase
cstrittmatter@0	357 blaOKP-B-8 WP_017900346.1
cstrittmatter@0	358 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	359 blaOKP-A-17 WP_023289605.1
cstrittmatter@0	360 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	361 blaOKP-B-23 WP_023318187.1
cstrittmatter@0	362 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	363 blaOKP-A-2 WP_032452758.1
cstrittmatter@0	364 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	365 blaOKP-B-1 WP_032456002.1
cstrittmatter@0	366 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	367 blaPAC-1 WP_034051940.1
cstrittmatter@0	368 product_name class C beta-lactamase PAC-1 -> inhibitior-resistant cephalosporin-hydrolyzing class C beta-lactamase PAC-1
cstrittmatter@0	369 subclass BETA-LACTAM -> CEPHALOSPORIN
cstrittmatter@0	370 blaOKP-A-3 WP_044522859.1
cstrittmatter@0	371 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	372 blaOKP-A-8 WP_048334865.1
cstrittmatter@0	373 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	374 blaOKP-B-7 WP_057215100.1
cstrittmatter@0	375 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	376 ampC WP_057991970.1
cstrittmatter@0	377 product_name class C beta-lactamase -> MCA family class C beta-lactamase
cstrittmatter@0	378 blaOKP-A-6 WP_060590773.1
cstrittmatter@0	379 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	380 ampC WP_063406924.1
cstrittmatter@0	381 product_name CMY2/MIR/ACT/EC family class c beta-lactamase -> CMY2/MIR/ACT/EC family class C beta-lactamase
cstrittmatter@0	382 blaOKP-B WP_063842745.1
cstrittmatter@0	383 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	384 blaOKP-A-1 WP_063860896.1
cstrittmatter@0	385 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	386 blaOKP-A-10 WP_063860897.1
cstrittmatter@0	387 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	388 blaOKP-A-11 WP_063860898.1
cstrittmatter@0	389 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	390 blaOKP-A-12 WP_063860899.1
cstrittmatter@0	391 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	392 blaOKP-A-13 WP_063860900.1
cstrittmatter@0	393 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	394 blaOKP-A-14 WP_063860901.1
cstrittmatter@0	395 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	396 blaOKP-A-15 WP_063860902.1
cstrittmatter@0	397 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	398 blaOKP-A-16 WP_063860903.1
cstrittmatter@0	399 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	400 blaOKP-A-4 WP_063860904.1
cstrittmatter@0	401 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	402 blaOKP-A-5 WP_063860905.1
cstrittmatter@0	403 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	404 blaOKP-A-7 WP_063860906.1
cstrittmatter@0	405 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	406 blaOKP-A-9 WP_063860907.1
cstrittmatter@0	407 gene_family blaOKP -> blaOKP-A
cstrittmatter@0	408 blaOKP-B-10 WP_063860908.1
cstrittmatter@0	409 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	410 blaOKP-B-11 WP_063860909.1
cstrittmatter@0	411 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	412 blaOKP-B-13 WP_063860910.1
cstrittmatter@0	413 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	414 blaOKP-B-17 WP_063860911.1
cstrittmatter@0	415 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	416 blaOKP-B-18 WP_063860912.1
cstrittmatter@0	417 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	418 blaOKP-B-19 WP_063860913.1
cstrittmatter@0	419 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	420 blaOKP-B-2 WP_063860914.1
cstrittmatter@0	421 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	422 blaOKP-B-20 WP_063860915.1
cstrittmatter@0	423 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	424 blaOKP-B-3 WP_063860916.1
cstrittmatter@0	425 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	426 blaOKP-B-4 WP_063860917.1
cstrittmatter@0	427 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	428 blaOKP-B-5 WP_063860923.1
cstrittmatter@0	429 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	430 blaOKP-B-9 WP_063860931.1
cstrittmatter@0	431 gene_family blaOKP -> blaOKP-B
cstrittmatter@0	432 icr-Mo WP_082741435.1
cstrittmatter@0	433 class -> COLISTIN
cstrittmatter@0	434 subclass -> COLISTIN
cstrittmatter@0	435 blaPDC-245 WP_100831609.1
cstrittmatter@0	436 product_name class C beta-lactamase PDC-245 -> inhibitor-resistant class C beta-lactamase PDC-245
cstrittmatter@0	437 blaPDC-270 WP_109791203.1
cstrittmatter@0	438 product_name class C beta-lactamase PDC-270 -> inhibitor-resistant class C beta-lactamase PDC-270
cstrittmatter@0	439 blaPDC-322 WP_138403314.1
cstrittmatter@0	440 product_name class C beta-lactamase PDC-322 -> inhibitor-resistant class C beta-lactamase PDC-322
cstrittmatter@0	441 blaKPC-41 WP_148044419.1
cstrittmatter@0	442 product_name carbapenem-hydrolyzing class A beta-lactamase KPC-41 -> inhibitor-resistant carbapenem-hydrolyzing class A beta-lactamase KPC-41
cstrittmatter@0	443 blaPDC-346 WP_148044438.1
cstrittmatter@0	444 product_name class C beta-lactamase PDC-346 -> inhibitor-resistant class C beta-lactamase PDC-346
cstrittmatter@0	445 blaPDC-381 WP_148044467.1
cstrittmatter@0	446 product_name class C beta-lactamase PDC-381 -> inhibitor-resistant class C beta-lactamase PDC-381
cstrittmatter@0	447 acrR_R45C WP_000101737.1
cstrittmatter@0	448 genbank_protein_accession -> AAC73566.1
cstrittmatter@0	449 product_name transcriptional regulator -> transcriptional regulator AcrR
cstrittmatter@0	450 basR_G15R WP_094970923.1
cstrittmatter@0	451 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	452 basR_G53A WP_094970923.1
cstrittmatter@0	453 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	454 basR_G53C WP_094970923.1
cstrittmatter@0	455 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	456 basR_G53E WP_094970923.1
cstrittmatter@0	457 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	458 basR_G53R WP_094970923.1
cstrittmatter@0	459 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	460 basR_G53S WP_094970923.1
cstrittmatter@0	461 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	462 basR_G53V WP_094970923.1
cstrittmatter@0	463 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	464 basR_G53W WP_094970923.1
cstrittmatter@0	465 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	466 basR_L105P WP_094970923.1
cstrittmatter@0	467 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	468 basR_R81L WP_094970923.1
cstrittmatter@0	469 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	470 basR_R81S WP_094970923.1
cstrittmatter@0	471 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	472 basR_S39I WP_094970923.1
cstrittmatter@0	473 genbank_protein_accession -> OZX69954.1
cstrittmatter@0	474 cmeR_G86A WP_002843095.1
cstrittmatter@0	475 genbank_protein_accession -> EAH9016342.1
cstrittmatter@0	476 cyaA_S352T WP_000281668.1
cstrittmatter@0	477 genbank_protein_accession -> CDJ73082.1
cstrittmatter@0	478 product_name adenylate cyclase -> adenylate cyclase CyaA
cstrittmatter@0	479 fabG_Y151V WP_001718014.1
cstrittmatter@0	480 genbank_protein_accession -> EMW23334.1
cstrittmatter@0	481 product_name beta-ketoacyl-ACP reductase -> beta-ketoacyl-ACP reductase FabG
cstrittmatter@0	482 fabI_F203A WP_000506490.1
cstrittmatter@0	483 genbank_protein_accession -> AAC74370.1
cstrittmatter@0	484 fabI_F203C WP_000506490.1
cstrittmatter@0	485 genbank_protein_accession -> AAC74370.1
cstrittmatter@0	486 fabI_F203L WP_000506490.1
cstrittmatter@0	487 genbank_protein_accession -> AAC74370.1
cstrittmatter@0	488 fabI_G93A WP_000506490.1
cstrittmatter@0	489 genbank_protein_accession -> AAC74370.1
cstrittmatter@0	490 fabI_G93S WP_000506490.1
cstrittmatter@0	491 genbank_protein_accession -> AAC74370.1
cstrittmatter@0	492 fabI_G93V WP_000506490.1
cstrittmatter@0	493 genbank_protein_accession -> AAC74370.1
cstrittmatter@0	494 folP_P64A WP_000764731.1
cstrittmatter@0	495 genbank_protein_accession -> GDV24718.1
cstrittmatter@0	496 product_name dihydropteroate synthase -> dihydropteroate synthase FolP
cstrittmatter@0	497 folP_P64H WP_000764731.1
cstrittmatter@0	498 genbank_protein_accession -> GDV24718.1
cstrittmatter@0	499 product_name dihydropteroate synthase -> dihydropteroate synthase FolP
cstrittmatter@0	500 folP_P64L WP_000764731.1
cstrittmatter@0	501 genbank_protein_accession -> GDV24718.1
cstrittmatter@0	502 product_name dihydropteroate synthase -> dihydropteroate synthase FolP
cstrittmatter@0	503 folP_P64R WP_000764731.1
cstrittmatter@0	504 genbank_protein_accession -> GDV24718.1
cstrittmatter@0	505 product_name dihydropteroate synthase -> dihydropteroate synthase FolP
cstrittmatter@0	506 folP_P64S WP_000764731.1
cstrittmatter@0	507 genbank_protein_accession -> GDV24718.1
cstrittmatter@0	508 product_name dihydropteroate synthase -> dihydropteroate synthase FolP
cstrittmatter@0	509 gyrA_A119E WP_001281271.1
cstrittmatter@0	510 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	511 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	512 gyrA_A119S WP_001281271.1
cstrittmatter@0	513 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	514 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	515 gyrA_A119V WP_001281271.1
cstrittmatter@0	516 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	517 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	518 gyrA_A131G WP_001281271.1
cstrittmatter@0	519 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	520 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	521 gyrA_A196E WP_001281243.1
cstrittmatter@0	522 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	523 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	524 gyrA_A51V WP_001281243.1
cstrittmatter@0	525 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	526 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	527 gyrA_A67P WP_001281271.1
cstrittmatter@0	528 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	529 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	530 gyrA_A67S WP_001281243.1
cstrittmatter@0	531 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	532 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	533 gyrA_A70T WP_002857904.1
cstrittmatter@0	534 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	535 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	536 gyrA_A84P WP_001281243.1
cstrittmatter@0	537 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	538 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	539 gyrA_A84V WP_001281243.1
cstrittmatter@0	540 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	541 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	542 gyrA_D72G WP_001281271.1
cstrittmatter@0	543 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	544 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	545 gyrA_D82G WP_001281243.1
cstrittmatter@0	546 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	547 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	548 gyrA_D82G WP_001281271.1
cstrittmatter@0	549 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	550 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	551 gyrA_D82N WP_001281271.1
cstrittmatter@0	552 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	553 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	554 gyrA_D85Y WP_002857904.1
cstrittmatter@0	555 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	556 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	557 gyrA_D87G WP_001281243.1
cstrittmatter@0	558 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	559 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	560 gyrA_D87G WP_001281271.1
cstrittmatter@0	561 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	562 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	563 gyrA_D87H WP_001281243.1
cstrittmatter@0	564 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	565 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	566 gyrA_D87K WP_001281271.1
cstrittmatter@0	567 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	568 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	569 gyrA_D87N WP_001281243.1
cstrittmatter@0	570 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	571 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	572 gyrA_D87N WP_001281271.1
cstrittmatter@0	573 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	574 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	575 gyrA_D87V WP_001281243.1
cstrittmatter@0	576 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	577 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	578 gyrA_D87Y WP_001281243.1
cstrittmatter@0	579 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	580 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	581 gyrA_D87Y WP_001281271.1
cstrittmatter@0	582 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	583 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	584 gyrA_D90A WP_002857904.1
cstrittmatter@0	585 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	586 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	587 gyrA_D90N WP_002779062.1
cstrittmatter@0	588 genbank_protein_accession -> AJW58405.1
cstrittmatter@0	589 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	590 gyrA_D90N WP_002857904.1
cstrittmatter@0	591 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	592 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	593 gyrA_D90T WP_002857904.1
cstrittmatter@0	594 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	595 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	596 gyrA_D90Y WP_002779062.1
cstrittmatter@0	597 genbank_protein_accession -> AJW58405.1
cstrittmatter@0	598 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	599 gyrA_D90Y WP_002857904.1
cstrittmatter@0	600 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	601 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	602 gyrA_E139A WP_001281271.1
cstrittmatter@0	603 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	604 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	605 gyrA_G81C WP_001281243.1
cstrittmatter@0	606 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	607 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	608 gyrA_G81C WP_001281271.1
cstrittmatter@0	609 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	610 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	611 gyrA_G81D WP_001281271.1
cstrittmatter@0	612 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	613 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	614 gyrA_G81H WP_001281271.1
cstrittmatter@0	615 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	616 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	617 gyrA_G81S WP_001281271.1
cstrittmatter@0	618 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	619 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	620 gyrA_H80P WP_001281243.1
cstrittmatter@0	621 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	622 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	623 gyrA_L98V WP_001281271.1
cstrittmatter@0	624 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	625 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	626 gyrA_N57K WP_001281243.1
cstrittmatter@0	627 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	628 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	629 gyrA_P104S WP_002779062.1
cstrittmatter@0	630 genbank_protein_accession -> AJW58405.1
cstrittmatter@0	631 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	632 gyrA_P104S WP_002857904.1
cstrittmatter@0	633 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	634 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	635 gyrA_Q106H WP_001281243.1
cstrittmatter@0	636 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	637 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	638 gyrA_Q106R WP_001281243.1
cstrittmatter@0	639 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	640 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	641 gyrA_S83A WP_001281243.1
cstrittmatter@0	642 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	643 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	644 gyrA_S83A WP_001281271.1
cstrittmatter@0	645 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	646 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	647 gyrA_S83F WP_001281243.1
cstrittmatter@0	648 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	649 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	650 gyrA_S83F WP_001281271.1
cstrittmatter@0	651 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	652 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	653 gyrA_S83I WP_001281243.1
cstrittmatter@0	654 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	655 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	656 gyrA_S83L WP_001281243.1
cstrittmatter@0	657 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	658 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	659 gyrA_S83V WP_001281243.1
cstrittmatter@0	660 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	661 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	662 gyrA_S83W WP_001281243.1
cstrittmatter@0	663 genbank_protein_accession -> AXO84158.1
cstrittmatter@0	664 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	665 gyrA_S83Y WP_001281271.1
cstrittmatter@0	666 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	667 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	668 gyrA_S97P WP_001281271.1
cstrittmatter@0	669 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	670 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	671 gyrA_T86A WP_002779062.1
cstrittmatter@0	672 genbank_protein_accession -> AJW58405.1
cstrittmatter@0	673 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	674 gyrA_T86A WP_002857904.1
cstrittmatter@0	675 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	676 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	677 gyrA_T86I WP_002779062.1
cstrittmatter@0	678 genbank_protein_accession -> AJW58405.1
cstrittmatter@0	679 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	680 gyrA_T86I WP_002857904.1
cstrittmatter@0	681 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	682 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	683 gyrA_T86K WP_002779062.1
cstrittmatter@0	684 genbank_protein_accession -> AJW58405.1
cstrittmatter@0	685 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	686 gyrA_T86K WP_002857904.1
cstrittmatter@0	687 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	688 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	689 gyrA_T86V WP_002779062.1
cstrittmatter@0	690 genbank_protein_accession -> AJW58405.1
cstrittmatter@0	691 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	692 gyrA_T86V WP_002857904.1
cstrittmatter@0	693 genbank_protein_accession -> CAL35145.1
cstrittmatter@0	694 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	695 gyrA_V73I WP_001281271.1
cstrittmatter@0	696 genbank_protein_accession -> EAB4993534.1
cstrittmatter@0	697 product_name DNA gyrase subunit A -> DNA gyrase subunit A GyrA
cstrittmatter@0	698 gyrB_D426N WP_000072067.1
cstrittmatter@0	699 genbank_protein_accession -> BAE77595.1
cstrittmatter@0	700 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	701 gyrB_E466D WP_000072047.1
cstrittmatter@0	702 genbank_protein_accession -> AHP21689.1
cstrittmatter@0	703 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	704 gyrB_K447E WP_000072067.1
cstrittmatter@0	705 genbank_protein_accession -> BAE77595.1
cstrittmatter@0	706 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	707 subclass QUINOLONE -> NALIDIXIC ACID
cstrittmatter@0	708 gyrB_R136C WP_000072067.1
cstrittmatter@0	709 genbank_protein_accession -> BAE77595.1
cstrittmatter@0	710 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	711 gyrB_R136E WP_000072067.1
cstrittmatter@0	712 genbank_protein_accession -> BAE77595.1
cstrittmatter@0	713 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	714 gyrB_R136G WP_000072067.1
cstrittmatter@0	715 genbank_protein_accession -> BAE77595.1
cstrittmatter@0	716 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	717 gyrB_R136H WP_000072067.1
cstrittmatter@0	718 genbank_protein_accession -> BAE77595.1
cstrittmatter@0	719 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	720 gyrB_R136I WP_000072067.1
cstrittmatter@0	721 genbank_protein_accession -> BAE77595.1
cstrittmatter@0	722 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	723 gyrB_R136L WP_000072067.1
cstrittmatter@0	724 genbank_protein_accession -> BAE77595.1
cstrittmatter@0	725 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	726 gyrB_R136S WP_000072067.1
cstrittmatter@0	727 genbank_protein_accession -> BAE77595.1
cstrittmatter@0	728 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	729 gyrB_R438L WP_000072047.1
cstrittmatter@0	730 genbank_protein_accession -> AHP21689.1
cstrittmatter@0	731 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	732 gyrB_S464F WP_000072047.1
cstrittmatter@0	733 genbank_protein_accession -> AHP21689.1
cstrittmatter@0	734 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	735 subclass QUINOLONE -> CIPROFLOXACIN
cstrittmatter@0	736 gyrB_S464Y WP_000072047.1
cstrittmatter@0	737 genbank_protein_accession -> AHP21689.1
cstrittmatter@0	738 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	739 subclass QUINOLONE -> CIPROFLOXACIN
cstrittmatter@0	740 gyrB_Y421C WP_000072047.1
cstrittmatter@0	741 genbank_protein_accession -> AHP21689.1
cstrittmatter@0	742 product_name DNA topoisomerase (ATP-hydrolyzing) subunit B -> DNA topoisomerase (ATP-hydrolyzing) subunit B GyrB
cstrittmatter@0	743 lon_P403L WP_001295325.1
cstrittmatter@0	744 genbank_protein_accession -> EQY31068.1
cstrittmatter@0	745 marR_A70T WP_000843414.1
cstrittmatter@0	746 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	747 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	748 marR_E31STOP WP_000843414.1
cstrittmatter@0	749 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	750 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	751 marR_I49S WP_000843414.1
cstrittmatter@0	752 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	753 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	754 marR_L78M WP_000843414.1
cstrittmatter@0	755 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	756 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	757 marR_R73C WP_000843414.1
cstrittmatter@0	758 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	759 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	760 marR_R73S WP_000843414.1
cstrittmatter@0	761 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	762 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	763 marR_R77C WP_000843414.1
cstrittmatter@0	764 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	765 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	766 marR_R77L WP_000843414.1
cstrittmatter@0	767 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	768 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	769 marR_R94H WP_000843414.1
cstrittmatter@0	770 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	771 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	772 marR_R94S WP_000843414.1
cstrittmatter@0	773 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	774 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	775 marR_S3N WP_000843414.1
cstrittmatter@0	776 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	777 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	778 marR_V45E WP_000843414.1
cstrittmatter@0	779 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	780 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	781 marR_V96E WP_000843414.1
cstrittmatter@0	782 genbank_protein_accession -> AAC74603.2
cstrittmatter@0	783 product_name MarR family transcriptional regulator -> transcriptional regulator MarR
cstrittmatter@0	784 murA_C115D WP_000357259.1
cstrittmatter@0	785 genbank_protein_accession -> AIL15701.1
cstrittmatter@0	786 product_name UDP-N-acetylglucosamine 1-carboxyvinyltransferase -> UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA
cstrittmatter@0	787 murA_C115E WP_000357259.1
cstrittmatter@0	788 genbank_protein_accession -> AIL15701.1
cstrittmatter@0	789 product_name UDP-N-acetylglucosamine 1-carboxyvinyltransferase -> UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA
cstrittmatter@0	790 murA_C115S WP_000357259.1
cstrittmatter@0	791 genbank_protein_accession -> AIL15701.1
cstrittmatter@0	792 product_name UDP-N-acetylglucosamine 1-carboxyvinyltransferase -> UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA
cstrittmatter@0	793 murA_D396N WP_000357259.1
cstrittmatter@0	794 genbank_protein_accession -> AIL15701.1
cstrittmatter@0	795 product_name UDP-N-acetylglucosamine 1-carboxyvinyltransferase -> UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA
cstrittmatter@0	796 murA_L370I WP_000357259.1
cstrittmatter@0	797 genbank_protein_accession -> AIL15701.1
cstrittmatter@0	798 product_name UDP-N-acetylglucosamine 1-carboxyvinyltransferase -> UDP-N-acetylglucosamine 1-carboxyvinyltransferase MurA
cstrittmatter@0	799 nfsA_G131D WP_089631889.1
cstrittmatter@0	800 genbank_protein_accession -> OYN67948.1
cstrittmatter@0	801 subclass NITROFURAN -> NITROFURANTOIN
cstrittmatter@0	802 nfsA_K141STOP WP_089631889.1
cstrittmatter@0	803 genbank_protein_accession -> OYN67948.1
cstrittmatter@0	804 subclass NITROFURAN -> NITROFURANTOIN
cstrittmatter@0	805 nfsA_Q44STOP WP_089631889.1
cstrittmatter@0	806 genbank_protein_accession -> OYN67948.1
cstrittmatter@0	807 subclass NITROFURAN -> NITROFURANTOIN
cstrittmatter@0	808 nfsA_R133S WP_089631889.1
cstrittmatter@0	809 genbank_protein_accession -> OYN67948.1
cstrittmatter@0	810 subclass NITROFURAN -> NITROFURANTOIN
cstrittmatter@0	811 nfsA_R15C WP_089631889.1
cstrittmatter@0	812 genbank_protein_accession -> OYN67948.1
cstrittmatter@0	813 subclass NITROFURAN -> NITROFURANTOIN
cstrittmatter@0	814 nfsA_R203C WP_089631889.1
cstrittmatter@0	815 genbank_protein_accession -> OYN67948.1
cstrittmatter@0	816 subclass NITROFURAN -> NITROFURANTOIN
cstrittmatter@0	817 nfsA_R203L WP_089631889.1
cstrittmatter@0	818 genbank_protein_accession -> OYN67948.1
cstrittmatter@0	819 subclass NITROFURAN -> NITROFURANTOIN
cstrittmatter@0	820 nfsA_S33R WP_089631889.1
cstrittmatter@0	821 genbank_protein_accession -> OYN67948.1
cstrittmatter@0	822 subclass NITROFURAN -> NITROFURANTOIN
cstrittmatter@0	823 ompF_G141D WP_000977920.1
cstrittmatter@0	824 genbank_protein_accession -> AAC74015.1
cstrittmatter@0	825 product_name outer membrane protein F -> outer membrane protein F OmpF
cstrittmatter@0	826 ompF_G141E WP_000977920.1
cstrittmatter@0	827 genbank_protein_accession -> AAC74015.1
cstrittmatter@0	828 product_name outer membrane protein F -> outer membrane protein F OmpF
cstrittmatter@0	829 parC_A108T WP_001281881.1
cstrittmatter@0	830 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	831 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	832 parC_A108V WP_001281881.1
cstrittmatter@0	833 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	834 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	835 parC_A56T WP_001281881.1
cstrittmatter@0	836 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	837 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	838 parC_A85T WP_001281881.1
cstrittmatter@0	839 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	840 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	841 parC_D111H WP_001281881.1
cstrittmatter@0	842 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	843 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	844 parC_E84A WP_001281881.1
cstrittmatter@0	845 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	846 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	847 parC_E84G WP_001281881.1
cstrittmatter@0	848 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	849 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	850 parC_E84G WP_001281910.1
cstrittmatter@0	851 genbank_protein_accession -> EAW2725281.1
cstrittmatter@0	852 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	853 parC_E84K WP_001281881.1
cstrittmatter@0	854 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	855 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	856 parC_E84K WP_001281910.1
cstrittmatter@0	857 genbank_protein_accession -> EAW2725281.1
cstrittmatter@0	858 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	859 parC_E84V WP_001281881.1
cstrittmatter@0	860 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	861 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	862 parC_F60I WP_001281881.1
cstrittmatter@0	863 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	864 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	865 parC_F60L WP_001281881.1
cstrittmatter@0	866 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	867 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	868 parC_G78D WP_001281881.1
cstrittmatter@0	869 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	870 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	871 parC_G78D WP_001281910.1
cstrittmatter@0	872 genbank_protein_accession -> EAW2725281.1
cstrittmatter@0	873 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	874 parC_G78K WP_001281881.1
cstrittmatter@0	875 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	876 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	877 parC_S129P WP_001281881.1
cstrittmatter@0	878 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	879 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	880 parC_S57T WP_001281881.1
cstrittmatter@0	881 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	882 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	883 parC_S80F WP_001281881.1
cstrittmatter@0	884 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	885 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	886 parC_S80I WP_001281881.1
cstrittmatter@0	887 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	888 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	889 parC_S80I WP_001281910.1
cstrittmatter@0	890 genbank_protein_accession -> EAW2725281.1
cstrittmatter@0	891 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	892 parC_S80L WP_001281881.1
cstrittmatter@0	893 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	894 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	895 parC_S80R WP_001281881.1
cstrittmatter@0	896 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	897 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	898 parC_S80R WP_001281910.1
cstrittmatter@0	899 genbank_protein_accession -> EAW2725281.1
cstrittmatter@0	900 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	901 parC_S80Y WP_001281881.1
cstrittmatter@0	902 genbank_protein_accession -> AAC76055.1
cstrittmatter@0	903 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	904 parC_T66I WP_001281910.1
cstrittmatter@0	905 genbank_protein_accession -> EAW2725281.1
cstrittmatter@0	906 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	907 parC_W106G WP_001281910.1
cstrittmatter@0	908 genbank_protein_accession -> EAW2725281.1
cstrittmatter@0	909 product_name DNA topoisomerase IV subunit A -> DNA topoisomerase IV subunit A ParC
cstrittmatter@0	910 parE_A499T WP_000195318.1
cstrittmatter@0	911 genbank_protein_accession -> ATQ05934.1
cstrittmatter@0	912 product_name DNA topoisomerase IV subunit B -> DNA topoisomerase IV subunit B ParE
cstrittmatter@0	913 parE_E454G WP_000195318.1
cstrittmatter@0	914 genbank_protein_accession -> ATQ05934.1
cstrittmatter@0	915 product_name DNA topoisomerase IV subunit B -> DNA topoisomerase IV subunit B ParE
cstrittmatter@0	916 parE_H462Y WP_000195318.1
cstrittmatter@0	917 genbank_protein_accession -> ATQ05934.1
cstrittmatter@0	918 product_name DNA topoisomerase IV subunit B -> DNA topoisomerase IV subunit B ParE
cstrittmatter@0	919 parE_M438I WP_000195318.1
cstrittmatter@0	920 genbank_protein_accession -> ATQ05934.1
cstrittmatter@0	921 product_name DNA topoisomerase IV subunit B -> DNA topoisomerase IV subunit B ParE
cstrittmatter@0	922 parE_S458P WP_000195318.1
cstrittmatter@0	923 genbank_protein_accession -> ATQ05934.1
cstrittmatter@0	924 product_name DNA topoisomerase IV subunit B -> DNA topoisomerase IV subunit B ParE
cstrittmatter@0	925 parE_V461G WP_000195318.1
cstrittmatter@0	926 genbank_protein_accession -> ATQ05934.1
cstrittmatter@0	927 product_name DNA topoisomerase IV subunit B -> DNA topoisomerase IV subunit B ParE
cstrittmatter@0	928 parE_V514G WP_000195318.1
cstrittmatter@0	929 genbank_protein_accession -> ATQ05934.1
cstrittmatter@0	930 product_name DNA topoisomerase IV subunit B -> DNA topoisomerase IV subunit B ParE
cstrittmatter@0	931 parE_V521F WP_000195318.1
cstrittmatter@0	932 genbank_protein_accession -> ATQ05934.1
cstrittmatter@0	933 product_name DNA topoisomerase IV subunit B -> DNA topoisomerase IV subunit B ParE
cstrittmatter@0	934 pmrA_G15R WP_000697899.1
cstrittmatter@0	935 genbank_protein_accession -> EAB2345955.1
cstrittmatter@0	936 pmrA_G53E WP_000697899.1
cstrittmatter@0	937 genbank_protein_accession -> EAB2345955.1
cstrittmatter@0	938 pmrA_G53R WP_000697899.1
cstrittmatter@0	939 genbank_protein_accession -> EAB2345955.1
cstrittmatter@0	940 pmrA_R81C WP_000697899.1
cstrittmatter@0	941 genbank_protein_accession -> EAB2345955.1
cstrittmatter@0	942 pmrA_R81H WP_000697899.1
cstrittmatter@0	943 genbank_protein_accession -> EAB2345955.1
cstrittmatter@0	944 pmrB_A159P WP_001300761.1
cstrittmatter@0	945 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	946 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	947 pmrB_A159V WP_001300761.1
cstrittmatter@0	948 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	949 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	950 pmrB_C84R WP_001300761.1
cstrittmatter@0	951 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	952 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	953 pmrB_C84Y WP_001300761.1
cstrittmatter@0	954 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	955 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	956 pmrB_E121A WP_001212189.1
cstrittmatter@0	957 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	958 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	959 pmrB_E121K WP_001300761.1
cstrittmatter@0	960 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	961 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	962 pmrB_E121Q WP_001300761.1
cstrittmatter@0	963 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	964 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	965 pmrB_E166K WP_001212189.1
cstrittmatter@0	966 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	967 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	968 pmrB_E166K WP_001300761.1
cstrittmatter@0	969 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	970 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	971 pmrB_G206D WP_001300761.1
cstrittmatter@0	972 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	973 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	974 pmrB_G206R WP_001212189.1
cstrittmatter@0	975 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	976 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	977 pmrB_G206W WP_001212189.1
cstrittmatter@0	978 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	979 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	980 pmrB_L10P WP_001300761.1
cstrittmatter@0	981 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	982 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	983 pmrB_L10R WP_001300761.1
cstrittmatter@0	984 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	985 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	986 pmrB_L14F WP_001212189.1
cstrittmatter@0	987 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	988 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	989 pmrB_L14R WP_001300761.1
cstrittmatter@0	990 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	991 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	992 pmrB_L14S WP_001212189.1
cstrittmatter@0	993 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	994 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	995 pmrB_L22P WP_001212189.1
cstrittmatter@0	996 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	997 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	998 pmrB_M186I WP_001212189.1
cstrittmatter@0	999 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1000 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1001 pmrB_N130Y WP_001212189.1
cstrittmatter@0	1002 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1003 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1004 pmrB_P94L WP_001300761.1
cstrittmatter@0	1005 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	1006 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1007 pmrB_P94Q WP_001212189.1
cstrittmatter@0	1008 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1009 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1010 pmrB_P94Q WP_001300761.1
cstrittmatter@0	1011 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	1012 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1013 pmrB_P94S WP_001300761.1
cstrittmatter@0	1014 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	1015 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1016 pmrB_R155P WP_001212189.1
cstrittmatter@0	1017 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1018 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1019 pmrB_S124P WP_001212189.1
cstrittmatter@0	1020 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1021 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1022 pmrB_S29R WP_001212189.1
cstrittmatter@0	1023 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1024 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1025 pmrB_S305R WP_001212189.1
cstrittmatter@0	1026 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1027 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1028 pmrB_T147A WP_001300761.1
cstrittmatter@0	1029 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	1030 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1031 pmrB_T147P WP_001212189.1
cstrittmatter@0	1032 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1033 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1034 pmrB_T156M WP_001212189.1
cstrittmatter@0	1035 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1036 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1037 pmrB_T156M WP_001300761.1
cstrittmatter@0	1038 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	1039 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1040 pmrB_T156P WP_001212189.1
cstrittmatter@0	1041 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1042 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1043 pmrB_T92A WP_001212189.1
cstrittmatter@0	1044 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1045 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1046 pmrB_V161G WP_001212189.1
cstrittmatter@0	1047 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1048 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1049 pmrB_V161G WP_001300761.1
cstrittmatter@0	1050 genbank_protein_accession -> KHH69629.1
cstrittmatter@0	1051 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1052 pmrB_V161L WP_001212189.1
cstrittmatter@0	1053 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1054 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1055 pmrB_V161M WP_001212189.1
cstrittmatter@0	1056 genbank_protein_accession -> EAM5131532.1
cstrittmatter@0	1057 product_name two-component sensor histidine kinase -> two-component system sensor histidine kinase PmrB
cstrittmatter@0	1058 ptsI_V25I WP_000623140.1
cstrittmatter@0	1059 genbank_protein_accession -> CDJ72759.1
cstrittmatter@0	1060 product_name phosphoenolpyruvate--protein phosphotransferase -> phosphoenolpyruvate--protein phosphotransferase PtsI
cstrittmatter@0	1061 ramR_E160D WP_000113609.1
cstrittmatter@0	1062 genbank_protein_accession -> ACH50230.1
cstrittmatter@0	1063 product_name TetR/AcrR family transcriptional regulator -> TetR/AcrR family transcriptional regulator RamR
cstrittmatter@0	1064 ramR_G25A WP_000113609.1
cstrittmatter@0	1065 genbank_protein_accession -> ACH50230.1
cstrittmatter@0	1066 product_name TetR/AcrR family transcriptional regulator -> TetR/AcrR family transcriptional regulator RamR
cstrittmatter@0	1067 ramR_M84I WP_000113609.1
cstrittmatter@0	1068 genbank_protein_accession -> ACH50230.1
cstrittmatter@0	1069 product_name TetR/AcrR family transcriptional regulator -> TetR/AcrR family transcriptional regulator RamR
cstrittmatter@0	1070 ramR_R46P WP_000113609.1
cstrittmatter@0	1071 genbank_protein_accession -> ACH50230.1
cstrittmatter@0	1072 product_name TetR/AcrR family transcriptional regulator -> TetR/AcrR family transcriptional regulator RamR
cstrittmatter@0	1073 ramR_T18P WP_000113609.1
cstrittmatter@0	1074 genbank_protein_accession -> ACH50230.1
cstrittmatter@0	1075 product_name TetR/AcrR family transcriptional regulator -> TetR/AcrR family transcriptional regulator RamR
cstrittmatter@0	1076 ramR_T50P WP_000113609.1
cstrittmatter@0	1077 genbank_protein_accession -> ACH50230.1
cstrittmatter@0	1078 product_name TetR/AcrR family transcriptional regulator -> TetR/AcrR family transcriptional regulator RamR
cstrittmatter@0	1079 ramR_Y59H WP_000113609.1
cstrittmatter@0	1080 genbank_protein_accession -> ACH50230.1
cstrittmatter@0	1081 product_name TetR/AcrR family transcriptional regulator -> TetR/AcrR family transcriptional regulator RamR
cstrittmatter@0	1082 rpoB_H526Y WP_000263098.1
cstrittmatter@0	1083 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1084 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1085 rpoB_L533P WP_000263098.1
cstrittmatter@0	1086 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1087 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1088 rpoB_P564L WP_000263098.1
cstrittmatter@0	1089 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1090 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1091 rpoB_Q513L WP_000263098.1
cstrittmatter@0	1092 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1093 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1094 rpoB_Q513P WP_000263098.1
cstrittmatter@0	1095 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1096 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1097 rpoB_R529C WP_000263098.1
cstrittmatter@0	1098 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1099 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1100 rpoB_R529S WP_000263098.1
cstrittmatter@0	1101 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1102 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1103 rpoB_R687H WP_000263098.1
cstrittmatter@0	1104 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1105 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1106 rpoB_S531F WP_000263098.1
cstrittmatter@0	1107 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1108 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1109 rpoB_T563P WP_000263098.1
cstrittmatter@0	1110 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1111 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1112 rpoB_V146F WP_000263098.1
cstrittmatter@0	1113 genbank_protein_accession -> CSN35596.1
cstrittmatter@0	1114 product_name DNA-directed RNA polymerase subunit beta -> DNA-directed RNA polymerase subunit beta RpoB
cstrittmatter@0	1115 rpsL_K43R WP_057042458.1
cstrittmatter@0	1116 genbank_protein_accession -> EAI0845362.1
cstrittmatter@0	1117 product_name 30S ribosomal protein S12 -> 30S ribosomal protein S12 RpsL
cstrittmatter@0	1118 rpsL_K88E WP_057042458.1
cstrittmatter@0	1119 genbank_protein_accession -> EAI0845362.1
cstrittmatter@0	1120 product_name 30S ribosomal protein S12 -> 30S ribosomal protein S12 RpsL
cstrittmatter@0	1121 rpsL_K88Q WP_057042458.1
cstrittmatter@0	1122 genbank_protein_accession -> EAI0845362.1
cstrittmatter@0	1123 product_name 30S ribosomal protein S12 -> 30S ribosomal protein S12 RpsL
cstrittmatter@0	1124 rpsL_K88R WP_057042458.1
cstrittmatter@0	1125 genbank_protein_accession -> EAI0845362.1
cstrittmatter@0	1126 product_name 30S ribosomal protein S12 -> 30S ribosomal protein S12 RpsL
cstrittmatter@0	1127 soxR_G121D WP_000412428.1
cstrittmatter@0	1128 genbank_protein_accession -> AAC77033.1
cstrittmatter@0	1129 soxR_G121D WP_000412686.1
cstrittmatter@0	1130 genbank_protein_accession -> CAD09250.1
cstrittmatter@0	1131 soxR_R20H WP_000412428.1
cstrittmatter@0	1132 genbank_protein_accession -> AAC77033.1
cstrittmatter@0	1133 soxR_R20H WP_000412686.1
cstrittmatter@0	1134 genbank_protein_accession -> CAD09250.1
cstrittmatter@0	1135 soxS_A12S WP_000019358.1
cstrittmatter@0	1136 genbank_protein_accession -> AAC77032.1
cstrittmatter@0	1137 soxS_E52K WP_000019483.1
cstrittmatter@0	1138 genbank_protein_accession -> AAL23089.1
cstrittmatter@0	1139 tufA_A376S WP_000031783.1
cstrittmatter@0	1140 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1141 tufA_A376T WP_000031783.1
cstrittmatter@0	1142 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1143 tufA_A376V WP_000031783.1
cstrittmatter@0	1144 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1145 tufA_E379K WP_000031783.1
cstrittmatter@0	1146 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1147 tufA_G317D WP_000031783.1
cstrittmatter@0	1148 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1149 tufA_L121Q WP_000031783.1
cstrittmatter@0	1150 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1151 tufA_Q125E WP_000031783.1
cstrittmatter@0	1152 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1153 tufA_Q125K WP_000031783.1
cstrittmatter@0	1154 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1155 tufA_Q125R WP_000031783.1
cstrittmatter@0	1156 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1157 tufA_Q330H WP_000031783.1
cstrittmatter@0	1158 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1159 tufA_R231C WP_000031783.1
cstrittmatter@0	1160 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1161 tufA_R231V WP_000031783.1
cstrittmatter@0	1162 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1163 tufA_R234F WP_000031783.1
cstrittmatter@0	1164 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1165 tufA_R234S WP_000031783.1
cstrittmatter@0	1166 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1167 tufA_R334C WP_000031783.1
cstrittmatter@0	1168 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1169 tufA_T335A WP_000031783.1
cstrittmatter@0	1170 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1171 tufA_Y161C WP_000031783.1
cstrittmatter@0	1172 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1173 tufA_Y161D WP_000031783.1
cstrittmatter@0	1174 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1175 tufA_Y161N WP_000031783.1
cstrittmatter@0	1176 genbank_protein_accession -> AAC76364.1
cstrittmatter@0	1177 uhpA_G97D WP_000633668.1
cstrittmatter@0	1178 genbank_protein_accession -> CDJ73205.1
cstrittmatter@0	1179 product_name DNA-binding response regulator -> DNA-binding response regulator UhpA
cstrittmatter@0	1180 uhpT_E350Q WP_000879194.1
cstrittmatter@0	1181 genbank_protein_accession -> CDJ73208.1
cstrittmatter@0	1182 product_name hexose phosphate transporter -> hexose phosphate transporter UhpT
cstrittmatter@0	1183
cstrittmatter@0	1184 - AMR HMM library Changes:
cstrittmatter@0	1185 Total: Added 2
cstrittmatter@0	1186 Total: Prev. Release 618
cstrittmatter@0	1187 Total: Removed 0
cstrittmatter@0	1188 Total: This Release 620
cstrittmatter@0	1189 HMM Added: NF037973.1 myrA-NCBI
cstrittmatter@0	1190 HMM Added: NF038003.1 blaPLA_ORN_TER-NCBI
cstrittmatter@0	1191 HMM Modified: NF000389.2 blaPLA_ORN_TER-NCBI updated to NF000389.2 blaPFM-NCBI
cstrittmatter@0	1192 HMM Modified: NF033560.1 myrA-NCBI updated to NF033560.1 metallo_SslE-NCBI
cstrittmatter@0	1193
cstrittmatter@0	1194 - Protein family changes:
cstrittmatter@0	1195 Total: Added 3
cstrittmatter@0	1196 Total: Prev. Release 1527
cstrittmatter@0	1197 Total: Removed 0
cstrittmatter@0	1198 Total: This Release 1530
cstrittmatter@0	1199 Family Added: - blaOKP-C
cstrittmatter@0	1200 Family Added: - blaOKP-D
cstrittmatter@0	1201 Family Added: NF037973.1 sslE
cstrittmatter@0	1202 Family Changed: - blaPFM updated to NF038003.1 blaPFM
cstrittmatter@0	1203
cstrittmatter@0	1204 ---------------------------------------------------------------------
cstrittmatter@0	1205 Changes included in 2019-10-30.1
cstrittmatter@0	1206 ---------------------------------------------------------------------
cstrittmatter@0	1207
cstrittmatter@0	1208 This update includes backward incompatible changes to the AMRFinderPlus
cstrittmatter@0	1209 database format. It is compatible with AMRFinderPlus version 3.2 and above.
cstrittmatter@0	1210 To use this database version please update to AMRFinderPlus version 3.2. See
cstrittmatter@0	1211 https://github.com/ncbi/amr/wiki/Upgrading for how to upgrade and
cstrittmatter@0	1212 https://github.com/evolarjun/amr/wiki/AMRFinderPlus-database for information
cstrittmatter@0	1213 on the new database format.
cstrittmatter@0	1214
cstrittmatter@0	1215 --organism / -O value Vibrio has been changed to Vibrio_cholerae because the
cstrittmatter@0	1216 blacklisted genes are common only in Vibrio_cholerae.
cstrittmatter@0	1217
cstrittmatter@0	1218 Two erronious proteins have been removed, several HMMs have been added, and
cstrittmatter@0	1219 many new AMR alleles and "plus" genes.
cstrittmatter@0	1220
cstrittmatter@0	1221 All HMM's have internal short names that have been changed to include a suffix
cstrittmatter@0	1222 to indicate the source (e.g., NCBI, Resfams, TIGRFAMs).
cstrittmatter@0	1223
cstrittmatter@0	1224 Class and subclass have been defined for some parent families where they were
cstrittmatter@0	1225 not before. These will only be visible in AMRFinderPlus results if there was a
cstrittmatter@0	1226 novel sequence classified by AMRFinder above the level of the gene included in
cstrittmatter@0	1227 the Reference Gene Catalog.
cstrittmatter@0	1228
cstrittmatter@0	1229 - Protein and point mutation changes:
cstrittmatter@0	1230 Total in prev: 6271
cstrittmatter@0	1231 Total in release: 6443
cstrittmatter@0	1232 Removed: 2
cstrittmatter@0	1233 Added: 174
cstrittmatter@0	1234 Changed: 42
cstrittmatter@0	1235 Removed ltcA CAA23532.1
cstrittmatter@0	1236 Removed sdeA EEZ94110.1
cstrittmatter@0	1237 Added bmaE AAA23523.1
cstrittmatter@0	1238 Added papG-II AAA24293.1
cstrittmatter@0	1239 Added focG AAB20438.1
cstrittmatter@0	1240 Added cdtA AAF81760.1
cstrittmatter@0	1241 Added ibeA AAF98391.2
cstrittmatter@0	1242 Added iutA AAN45165.2
cstrittmatter@0	1243 Added sdeA AAS55383.1
cstrittmatter@0	1244 Added emrD ACN65732.1
cstrittmatter@0	1245 Added tcdR AJP10335.1
cstrittmatter@0	1246 Added tcdB AJP10336.1
cstrittmatter@0	1247 Added tcdE AJP10337.1
cstrittmatter@0	1248 Added tcdA AJP10339.1
cstrittmatter@0	1249 Added tcdC AJP10340.1
cstrittmatter@0	1250 Added sfaF ASJ31253.1
cstrittmatter@0	1251 Added emrD BAE77620.1
cstrittmatter@0	1252 Added papG-III CAA43558.1
cstrittmatter@0	1253 Added papA CAA43562.1
cstrittmatter@0	1254 Added papH CAA43563.1
cstrittmatter@0	1255 Added papC CAA43564.1
cstrittmatter@0	1256 Added papE CAA43568.1
cstrittmatter@0	1257 Added papG-I CAA43570.1
cstrittmatter@0	1258 Added afaC CAA54117.1
cstrittmatter@0	1259 Added afaC CAW30799.1
cstrittmatter@0	1260 Added cdtB CBE05858.1
cstrittmatter@0	1261 Added emrD EFF04178.1
cstrittmatter@0	1262 Added sfaF EIL44824.1
cstrittmatter@0	1263 Added papA ENA25238.1
cstrittmatter@0	1264 Added cvaC P22522.1
cstrittmatter@0	1265 Added mepA Q7A7N0.1
cstrittmatter@0	1266 Added blaOXA-856 WP_001021774.1
cstrittmatter@0	1267 Added blaOXA-847 WP_010793618.1
cstrittmatter@0	1268 Added blaOXA-851 WP_014603442.1
cstrittmatter@0	1269 Added tva(B) WP_014936356.1
cstrittmatter@0	1270 Added blaOXA-848 WP_019485147.1
cstrittmatter@0	1271 Added mcr-10.1 WP_023332837.1
cstrittmatter@0	1272 Added blaADC-212 WP_031975357.1
cstrittmatter@0	1273 Added blaADC-203 WP_032000414.1
cstrittmatter@0	1274 Added blaOXA-855 WP_032061328.1
cstrittmatter@0	1275 Added blaACT-74 WP_032652275.1
cstrittmatter@0	1276 Added blaOXA-846 WP_033989974.1
cstrittmatter@0	1277 Added blaOXA-850 WP_034006563.1
cstrittmatter@0	1278 Added blaADC-215 WP_039098799.1
cstrittmatter@0	1279 Added blaADC-216 WP_039211240.1
cstrittmatter@0	1280 Added blaADC-219 WP_039213353.1
cstrittmatter@0	1281 Added blaAQU-1 WP_042888870.1
cstrittmatter@0	1282 Added blaLEN-32 WP_043875313.1
cstrittmatter@0	1283 Added blaACT-75 WP_045347148.1
cstrittmatter@0	1284 Added blaCMY-137 WP_053390271.1
cstrittmatter@0	1285 Added blaADC-214 WP_060454527.1
cstrittmatter@0	1286 Added blaADC-217 WP_060470109.1
cstrittmatter@0	1287 Added blaLEN-42 WP_061154665.1
cstrittmatter@0	1288 Added fosA8 WP_063277905.1
cstrittmatter@0	1289 Added blaLEN-34 WP_072124806.1
cstrittmatter@0	1290 Added blaLEN-43 WP_074385924.1
cstrittmatter@0	1291 Added blaADC-218 WP_078216190.1
cstrittmatter@0	1292 Added blaADC-213 WP_078230092.1
cstrittmatter@0	1293 Added blaLEN-30 WP_080923375.1
cstrittmatter@0	1294 Added blaAXC-3 WP_081330264.1
cstrittmatter@0	1295 Added blaOXA-842 WP_087088911.1
cstrittmatter@0	1296 Added blaADC-220 WP_087876534.1
cstrittmatter@0	1297 Added blaLEN-55 WP_094917017.1
cstrittmatter@0	1298 Added blaAXC-2 WP_100505522.1
cstrittmatter@0	1299 Added blaLEN-41 WP_100675621.1
cstrittmatter@0	1300 Added blaLEN-12 WP_110196444.1
cstrittmatter@0	1301 Added blaOXA-854 WP_114158997.1
cstrittmatter@0	1302 Added blaADC-199 WP_114166683.1
cstrittmatter@0	1303 Added blaOXA-853 WP_114252036.1
cstrittmatter@0	1304 Added blaLEN-58 WP_117122976.1
cstrittmatter@0	1305 Added blaLEN-51 WP_123836928.1
cstrittmatter@0	1306 Added blaACT-76 WP_126817982.1
cstrittmatter@0	1307 Added blaADC-207 WP_130173437.1
cstrittmatter@0	1308 Added blaADC-194 WP_133972424.1
cstrittmatter@0	1309 Added blaOXA-822 WP_133973918.1
cstrittmatter@0	1310 Added blaPDC-319 WP_134254706.1
cstrittmatter@0	1311 Added blaLEN-39 WP_136026639.1
cstrittmatter@0	1312 Added blaLEN-40 WP_136049560.1
cstrittmatter@0	1313 Added blaLEN-38 WP_136086342.1
cstrittmatter@0	1314 Added blaPDC-322 WP_138403314.1
cstrittmatter@0	1315 Added blaOXA-894 WP_144376393.1
cstrittmatter@0	1316 Added blaADC-197 WP_150823452.1
cstrittmatter@0	1317 Added blaADC-198 WP_150823453.1
cstrittmatter@0	1318 Added blaADC-200 WP_150823454.1
cstrittmatter@0	1319 Added blaADC-201 WP_150823455.1
cstrittmatter@0	1320 Added blaADC-202 WP_150823456.1
cstrittmatter@0	1321 Added blaADC-204 WP_150823457.1
cstrittmatter@0	1322 Added blaADC-205 WP_150823458.1
cstrittmatter@0	1323 Added blaADC-206 WP_150823459.1
cstrittmatter@0	1324 Added blaADC-208 WP_150823460.1
cstrittmatter@0	1325 Added blaADC-209 WP_150823461.1
cstrittmatter@0	1326 Added blaADC-210 WP_150823462.1
cstrittmatter@0	1327 Added blaADC-211 WP_150823463.1
cstrittmatter@0	1328 Added blaAXC-4 WP_150823464.1
cstrittmatter@0	1329 Added blaAXC-5 WP_150823465.1
cstrittmatter@0	1330 Added blaCARB-51 WP_150823466.1
cstrittmatter@0	1331 Added blaCARB-52 WP_150823467.1
cstrittmatter@0	1332 Added blaEBR-3 WP_150823468.1
cstrittmatter@0	1333 Added blaIMP-65 WP_150823469.1
cstrittmatter@0	1334 Added blaOXA-838 WP_150823470.1
cstrittmatter@0	1335 Added blaOXA-839 WP_150823471.1
cstrittmatter@0	1336 Added blaOXA-840 WP_150823472.1
cstrittmatter@0	1337 Added blaOXA-841 WP_150823473.1
cstrittmatter@0	1338 Added blaOXA-843 WP_150823474.1
cstrittmatter@0	1339 Added blaOXA-844 WP_150823475.1
cstrittmatter@0	1340 Added blaOXA-845 WP_150823476.1
cstrittmatter@0	1341 Added blaOXA-849 WP_150823477.1
cstrittmatter@0	1342 Added blaPDC-318 WP_150823478.1
cstrittmatter@0	1343 Added blaPDC-320 WP_150823479.1
cstrittmatter@0	1344 Added blaPDC-321 WP_150823480.1
cstrittmatter@0	1345 Added blaPDC-323 WP_150823481.1
cstrittmatter@0	1346 Added blaPDC-324 WP_150823482.1
cstrittmatter@0	1347 Added blaPDC-325 WP_150823483.1
cstrittmatter@0	1348 Added blaPDC-326 WP_150823484.1
cstrittmatter@0	1349 Added blaPDC-327 WP_150823485.1
cstrittmatter@0	1350 Added blaPDC-328 WP_150823486.1
cstrittmatter@0	1351 Added blaPDC-329 WP_150823487.1
cstrittmatter@0	1352 Added blaPDC-330 WP_150823488.1
cstrittmatter@0	1353 Added blaPDC-331 WP_150823489.1
cstrittmatter@0	1354 Added blaPDC-332 WP_150823490.1
cstrittmatter@0	1355 Added blaPDC-384 WP_150823491.1
cstrittmatter@0	1356 Added blaPDC-385 WP_150823492.1
cstrittmatter@0	1357 Added blaPDC-386 WP_150823493.1
cstrittmatter@0	1358 Added blaPST-2 WP_150823494.1
cstrittmatter@0	1359 Added blaTEM-240 WP_150823495.1
cstrittmatter@0	1360 Added mcr-3.28 WP_150823496.1
cstrittmatter@0	1361 Added mcr-8.3 WP_150823497.1
cstrittmatter@0	1362 Added tva(A) WP_151874537.1
cstrittmatter@0	1363 Added blaACT-73 WP_152315464.1
cstrittmatter@0	1364 Added blaIMP-85 WP_152315465.1
cstrittmatter@0	1365 Added blaMIR-23 WP_152315466.1
cstrittmatter@0	1366 Added blaNDM-25 WP_152315467.1
cstrittmatter@0	1367 Added blaOXA-830 WP_152315468.1
cstrittmatter@0	1368 Added blaOXA-852 WP_152315469.1
cstrittmatter@0	1369 Added blaOXA-857 WP_152315470.1
cstrittmatter@0	1370 Added blaOXA-858 WP_152315471.1
cstrittmatter@0	1371 Added blaOXA-859 WP_152315472.1
cstrittmatter@0	1372 Added blaOXA-860 WP_152315473.1
cstrittmatter@0	1373 Added blaOXA-861 WP_152315474.1
cstrittmatter@0	1374 Added blaOXA-862 WP_152315475.1
cstrittmatter@0	1375 Added blaOXA-863 WP_152315476.1
cstrittmatter@0	1376 Added blaOXA-864 WP_152315477.1
cstrittmatter@0	1377 Added blaOXA-865 WP_152315478.1
cstrittmatter@0	1378 Added blaOXA-866 WP_152315479.1
cstrittmatter@0	1379 Added blaOXA-867 WP_152315480.1
cstrittmatter@0	1380 Added blaOXA-868 WP_152315481.1
cstrittmatter@0	1381 Added blaOXA-869 WP_152315482.1
cstrittmatter@0	1382 Added blaOXA-870 WP_152315483.1
cstrittmatter@0	1383 Added blaOXA-871 WP_152315484.1
cstrittmatter@0	1384 Added blaOXA-872 WP_152315485.1
cstrittmatter@0	1385 Added blaOXA-873 WP_152315486.1
cstrittmatter@0	1386 Added blaOXA-874 WP_152315487.1
cstrittmatter@0	1387 Added blaOXA-875 WP_152315488.1
cstrittmatter@0	1388 Added blaOXA-876 WP_152315489.1
cstrittmatter@0	1389 Added blaOXA-877 WP_152315490.1
cstrittmatter@0	1390 Added blaOXA-878 WP_152315491.1
cstrittmatter@0	1391 Added blaOXA-879 WP_152315492.1
cstrittmatter@0	1392 Added blaOXA-880 WP_152315493.1
cstrittmatter@0	1393 Added blaOXA-881 WP_152315494.1
cstrittmatter@0	1394 Added blaOXA-882 WP_152315495.1
cstrittmatter@0	1395 Added blaOXA-883 WP_152315496.1
cstrittmatter@0	1396 Added blaOXA-884 WP_152315497.1
cstrittmatter@0	1397 Added blaOXA-885 WP_152315498.1
cstrittmatter@0	1398 Added blaOXA-886 WP_152315499.1
cstrittmatter@0	1399 Added blaOXA-887 WP_152315500.1
cstrittmatter@0	1400 Added blaOXA-888 WP_152315501.1
cstrittmatter@0	1401 Added blaOXA-889 WP_152315502.1
cstrittmatter@0	1402 Added blaOXA-890 WP_152315503.1
cstrittmatter@0	1403 Added blaOXA-891 WP_152315504.1
cstrittmatter@0	1404 Added blaOXA-892 WP_152315505.1
cstrittmatter@0	1405 Added blaPDC-387 WP_152315506.1
cstrittmatter@0	1406 Added blaPDC-388 WP_152315507.1
cstrittmatter@0	1407 Added blaLEN-35 WP_152330887.1
cstrittmatter@0	1408 Added blaLEN-36 WP_152330888.1
cstrittmatter@0	1409 Added blaLEN-37 WP_152330889.1
cstrittmatter@0	1410 Added blaSHV-4 WP_152330890.1
cstrittmatter@0	1411 Changes:
cstrittmatter@0	1412 arsB AAA21095.1
cstrittmatter@0	1413 blacklisted_taxa -> Escherichia
cstrittmatter@0	1414 arsC AAB09628.1
cstrittmatter@0	1415 blacklisted_taxa -> Escherichia
cstrittmatter@0	1416 ymgB AAC74250.1
cstrittmatter@0	1417 subclass ACID ->
cstrittmatter@0	1418 subtype BIOCIDE -> ACID
cstrittmatter@0	1419 emrD3 ABQ18953.1
cstrittmatter@0	1420 blacklisted_taxa Vibrio -> Vibrio_cholerae
cstrittmatter@0	1421 arsB BAA24823.1
cstrittmatter@0	1422 blacklisted_taxa -> Escherichia
cstrittmatter@0	1423 fieF BAB89353.1
cstrittmatter@0	1424 blacklisted_taxa -> Klebsiella
cstrittmatter@0	1425 aac(6')-I WP_002289795.1
cstrittmatter@0	1426 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1427 aac(6')-I WP_002293569.1
cstrittmatter@0	1428 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1429 aac(6')-I WP_002293989.1
cstrittmatter@0	1430 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1431 aac(6')-I WP_002328174.1
cstrittmatter@0	1432 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1433 aac(6')-I WP_002339746.1
cstrittmatter@0	1434 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1435 aac(6')-I WP_002373947.1
cstrittmatter@0	1436 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1437 aac(6')-Iih WP_005880220.1
cstrittmatter@0	1438 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1439 aac(6')-Ii WP_008265821.1
cstrittmatter@0	1440 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1441 aac(6')-Iid WP_010720790.1
cstrittmatter@0	1442 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1443 aac(6')-I WP_010723742.1
cstrittmatter@0	1444 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1445 aac(6')-I WP_010727362.1
cstrittmatter@0	1446 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1447 aac(6')-I WP_010728104.1
cstrittmatter@0	1448 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1449 aac(6')-I WP_010736157.1
cstrittmatter@0	1450 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1451 aac(6')-I WP_010737153.1
cstrittmatter@0	1452 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1453 aac(6')-I WP_010750427.1
cstrittmatter@0	1454 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1455 aac(6')-I WP_010752789.1
cstrittmatter@0	1456 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1457 aac(6')-I WP_010768325.1
cstrittmatter@0	1458 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1459 aac(6')-I WP_016172918.1
cstrittmatter@0	1460 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1461 aac(6')-I WP_016177698.1
cstrittmatter@0	1462 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1463 aac(6')-I WP_016628216.1
cstrittmatter@0	1464 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1465 aac(6')-I WP_019722502.1
cstrittmatter@0	1466 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1467 aac(6')-I WP_023519215.1
cstrittmatter@0	1468 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1469 aac(6')-I WP_024635824.1
cstrittmatter@0	1470 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1471 aac(6')-I WP_034688908.1
cstrittmatter@0	1472 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1473 aac(6')-I WP_034700626.1
cstrittmatter@0	1474 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1475 aac(6')-I WP_034860925.1
cstrittmatter@0	1476 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1477 blaOXA-252 WP_037428895.1
cstrittmatter@0	1478 curated_refseq_start Yes -> No
cstrittmatter@0	1479 genbank_cds_start 842113 -> 2724286
cstrittmatter@0	1480 genbank_cds_stop 842910 -> 2725083
cstrittmatter@0	1481 genbank_nucleotide_accession JTLE01000094.1 -> CP022089.2
cstrittmatter@0	1482 genbank_protein_accession -> ASF15667.1
cstrittmatter@0	1483 genbank_strand_orientation + -> -
cstrittmatter@0	1484 refseq_nucleotide_accession NG_050608.1 -> NG_066509.1
cstrittmatter@0	1485 aac(6')-I WP_048603867.1
cstrittmatter@0	1486 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1487 aac(6')-I WP_053766315.1
cstrittmatter@0	1488 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1489 blaOXA-539 WP_071593233.1
cstrittmatter@0	1490 product_name OXA-2 family class D extended-spectrum beta-lactamase OXA-539 -> OXA-2 family inhibitor-resistant class D extended-spectrum beta-lactamase OXA-539
cstrittmatter@0	1491 subclass BETA-LACTAM -> CEPHALOSPORIN
cstrittmatter@0	1492 lnu(F) WP_071846285.1
cstrittmatter@0	1493 allele linH2 ->
cstrittmatter@0	1494 aac(6')-I WP_071846353.1
cstrittmatter@0	1495 gene_family aac(6') -> aac(6')-I
cstrittmatter@0	1496 blaOXA-576 WP_087696200.1
cstrittmatter@0	1497 curated_refseq_start Yes -> No
cstrittmatter@0	1498 genbank_cds_start 843910 -> 1
cstrittmatter@0	1499 genbank_cds_stop 844656 -> 747
cstrittmatter@0	1500 genbank_nucleotide_accession NFPA01000015.1 -> MH085550.1
cstrittmatter@0	1501 genbank_protein_accession -> AWD39715.1
cstrittmatter@0	1502 refseq_nucleotide_accession NG_057458.1 -> NG_066510.1
cstrittmatter@0	1503 blaAQU WP_099156042.1
cstrittmatter@0	1504 allele blaAQU-1 ->
cstrittmatter@0	1505 product_name class C beta-lactamase AQU-1 -> AQU family class C beta-lactamase
cstrittmatter@0	1506 blaKPC-40 WP_115470049.1
cstrittmatter@0	1507 product_name carbapenem-hydrolyzing class A beta-lactamase KPC-40 -> inhibitor-resistant carbapenem-hydrolyzing class A beta-lactamase KPC-40
cstrittmatter@0	1508 blaOXA-681 WP_122630881.1
cstrittmatter@0	1509 product_name OXA-2 family class D beta-lactamase OXA-681 -> OXA-2 family inhibitor-resistant class D extended-spectrum beta-lactamase OXA-681
cstrittmatter@0	1510 subclass BETA-LACTAM -> CEPHALOSPORIN
cstrittmatter@0	1511 - AMR HMM library Changes:
cstrittmatter@0	1512 Total: Added 10
cstrittmatter@0	1513 Total: Prev. Release 608
cstrittmatter@0	1514 Total: Removed 0
cstrittmatter@0	1515 Total: This Release 618
cstrittmatter@0	1516 HMM Added: 154989_fosA-NCBI
cstrittmatter@0	1517 HMM Added: NF000252.1 MsrSA-NCBI
cstrittmatter@0	1518 HMM Added: NF000282.2 RPH_KJ151292.1-NCBI
cstrittmatter@0	1519 HMM Added: NF000315.1 amicyc_ac_ApmA-NCBI
cstrittmatter@0	1520 HMM Added: NF028537.1 QacCGHJ-NCBI
cstrittmatter@0	1521 HMM Added: NF033086.2 penta_rpt_QnrA-NCBI
cstrittmatter@0	1522 HMM Added: NF033134.0 cmlB1_MFS-NCBI
cstrittmatter@0	1523 HMM Added: NF033643.1 FOX-MOX-NCBI
cstrittmatter@0	1524 HMM Added: NF033651.1 dipept_VanX-NCBI
cstrittmatter@0	1525 HMM Added: NF033653.1 blaOXA-274_like-NCBI
cstrittmatter@0	1526 HMM Modified: NF000004.1 vanH-D updated to NF000004.1 vanH-Sc-NCBI
cstrittmatter@0	1527 HMM Modified: NF000005.4 ble_BLMT updated to NF000005.4 ble_MBL-NCBI
cstrittmatter@0	1528 HMM Modified: NF000006.2 trim_DfrA26 updated to NF000006.2 trim_DfrA3-NCBI
cstrittmatter@0	1529 HMM Modified: NF000007.1 16S_rRNA_Rmt_D updated to NF000007.1 16S_rRNA_Rmt_E-NCBI
cstrittmatter@0	1530 HMM Modified: NF000008.1 trim_DfrA1_rpt updated to NF000008.1 trim_DfrA20-NCBI
cstrittmatter@0	1531 HMM Modified: NF000009.1 tet_MFS_Tcr3 updated to NF000009.1 tet_MFS_V-NCBI
cstrittmatter@0	1532 HMM Modified: NF000010.1 AAC_2p_Ib updated to NF000010.1 AAC_2p_Ic-NCBI
cstrittmatter@0	1533 HMM Modified: NF000011.2 APH_6_Ic updated to NF000011.2 APH_6_Ic_gen-NCBI
cstrittmatter@0	1534 HMM Modified: NF000012.1 trim_DfrI updated to NF000012.1 vanH-Ac1-NCBI
cstrittmatter@0	1535 HMM Modified: NF000013.1 tet_NaH_anti_35 updated to NF000013.1 tet_destruct-NCBI
cstrittmatter@0	1536 HMM Modified: NF000014.1 tet_prtrans_34 updated to NF000014.1 tet_redox_37-NCBI
cstrittmatter@0	1537 HMM Modified: NF000015.3 APH_2pp_IIa updated to NF000015.3 APH_2pp_I_a_f_h-NCBI
cstrittmatter@0	1538 HMM Modified: NF000016.1 AAC_6p_Im updated to NF000016.1 AAC_6p_Ip-NCBI
cstrittmatter@0	1539 HMM Modified: NF000017.1 linco_LnuD updated to NF000017.1 linco_LnuE-NCBI
cstrittmatter@0	1540 HMM Modified: NF000018.2 trim_DfrA10 updated to NF000018.2 trim_DfrA12-NCBI
cstrittmatter@0	1541 HMM Modified: NF000019.2 trim_DfrA3 updated to NF000019.2 trim_DfrA35-NCBI
cstrittmatter@0	1542 HMM Modified: NF000020.1 stregram_VatE updated to NF000020.1 stregram_VatF-NCBI
cstrittmatter@0	1543 HMM Modified: NF000021.4 AAC_6p_Serra updated to NF000021.4 AAC_6p_Steno-NCBI
cstrittmatter@0	1544 HMM Modified: NF000022.1 stregra_B_VgbA updated to NF000022.1 stregra_B_VgbB-NCBI
cstrittmatter@0	1545 HMM Modified: NF000023.1 qac_SMR_C updated to NF000023.1 qac_SMR_G-NCBI
cstrittmatter@0	1546 HMM Modified: NF000024.1 ErmS updated to NF000024.1 ErmV-NCBI
cstrittmatter@0	1547 HMM Modified: NF000025.1 MFS_efflux_tcmA updated to NF000025.1 MOX_CMY1_fam-NCBI
cstrittmatter@0	1548 HMM Modified: NF000026.1 154989_fosA updated to NF000026.1 156720500_bleO-NCBI
cstrittmatter@0	1549 HMM Modified: NF000027.1 156720500_bleO updated to NF000027.1 1567214_ble-NCBI
cstrittmatter@0	1550 HMM Modified: NF000028.1 1567214_ble updated to NF000028.1 16S_rRNA_NpmA-NCBI
cstrittmatter@0	1551 HMM Modified: NF000029.2 APH_9_Ib updated to NF000029.2 BlaA_Yent-NCBI
cstrittmatter@0	1552 HMM Modified: NF000030.1 16S_rRNA_NpmA updated to NF000030.1 16S_rRNA_Rmt_B-NCBI
cstrittmatter@0	1553 HMM Modified: NF000032.1 D_ala_D_ser_VanL updated to NF000032.1 D_ala_D_ser_VanN-NCBI
cstrittmatter@0	1554 HMM Modified: NF000033.1 vanT-L-mem updated to NF000033.1 vanW-B-NCBI
cstrittmatter@0	1555 HMM Modified: NF000034.1 AAC_2p_Ic updated to NF000034.1 AAC_2p_Id-NCBI
cstrittmatter@0	1556 HMM Modified: NF000035.1 nosihep_NshR updated to NF000035.1 penta_rpt_Qnr-NCBI
cstrittmatter@0	1557 HMM Modified: NF000036.1 D_ala_D_ser_VanE updated to NF000036.1 D_ala_D_ser_VanG-NCBI
cstrittmatter@0	1558 HMM Modified: NF000037.1 RND_perm_OqxB updated to NF000037.1 RND_permease_1-NCBI
cstrittmatter@0	1559 HMM Modified: NF000039.1 trim_DfrA18 updated to NF000039.1 trim_DfrA19-NCBI
cstrittmatter@0	1560 HMM Modified: NF000041.1 trim_DfrA19 updated to NF000041.1 trim_DfrA1_like-NCBI
cstrittmatter@0	1561 HMM Modified: NF000042.1 AAC_2p_Id updated to NF000042.1 AAC_2p_Ie-NCBI
cstrittmatter@0	1562 HMM Modified: NF000043.1 tet_MFS_P_a updated to NF000043.1 tet_MFS_Tcr3-NCBI
cstrittmatter@0	1563 HMM Modified: NF000044.2 APH_2pp_IIIa updated to NF000044.2 APH_2pp_IIa-NCBI
cstrittmatter@0	1564 HMM Modified: NF000047.1 ErmV updated to NF000047.1 EspJ_gen-NCBI
cstrittmatter@0	1565 HMM Modified: NF000048.1 AAC_6p_A40 updated to NF000048.1 AAC_6p_A48-NCBI
cstrittmatter@0	1566 HMM Modified: NF000049.1 tet_MFS_40 updated to NF000049.1 tet_MFS_42-NCBI
cstrittmatter@0	1567 HMM Modified: NF000050.2 AAC_6p_A29 updated to NF000050.2 AAC_6p_A30-NCBI
cstrittmatter@0	1568 HMM Modified: NF000051.1 macrolide_MefB updated to NF000051.1 macrolide_MefC-NCBI
cstrittmatter@0	1569 HMM Modified: NF000052.4 APH_9_Ia updated to NF000052.4 APH_9_Ib-NCBI
cstrittmatter@0	1570 HMM Modified: NF000053.2 trim_DfrA12 updated to NF000053.2 trim_DfrA13_A21-NCBI
cstrittmatter@0	1571 HMM Modified: NF000054.1 AAC_2p_Ie updated to NF000054.1 AAC_3-NCBI
cstrittmatter@0	1572 HMM Modified: NF000055.3 trim_DfrA13_A21 updated to NF000055.3 trim_DfrA18-NCBI
cstrittmatter@0	1573 HMM Modified: NF000056.3 penta_rpt_QnrS updated to NF000056.3 penta_rpt_QnrVC-NCBI
cstrittmatter@0	1574 HMM Modified: NF000059.1 tet_redox_37 updated to NF000059.1 toxin_EAST1-NCBI
cstrittmatter@0	1575 HMM Modified: NF000061.1 linco_LnuP updated to NF000061.1 lyase_MerB-NCBI
cstrittmatter@0	1576 HMM Modified: NF000062.1 ANT_6_str updated to NF000062.1 ANT_9-NCBI
cstrittmatter@0	1577 HMM Modified: NF000063.1 Fos_BSH_Sepi updated to NF000063.1 Fos_GSH-NCBI
cstrittmatter@0	1578 HMM Modified: NF000064.3 ANT_2pp_Ia updated to NF000064.3 ANT_3pp_AadA1-NCBI
cstrittmatter@0	1579 HMM Modified: NF000065.1 trim_DfrA3b updated to NF000065.1 trim_DfrA8-NCBI
cstrittmatter@0	1580 HMM Modified: NF000066.1 rifampin_ARR_Sa updated to NF000066.1 sat2-NCBI
cstrittmatter@0	1581 HMM Modified: NF000067.2 SMR_qac_FL updated to NF000067.2 SMR_qac_G2-NCBI
cstrittmatter@0	1582 HMM Modified: NF000069.1 16S_rRNA_Rmt_E updated to NF000069.1 16S_rRNA_Rmt_F-NCBI
cstrittmatter@0	1583 HMM Modified: NF000071.4 penta_rpt_QnrA updated to NF000071.4 penta_rpt_QnrAS-NCBI
cstrittmatter@0	1584 HMM Modified: NF000072.1 MFS_efflux_PexA updated to NF000072.1 MFS_efflux_tcmA-NCBI
cstrittmatter@0	1585 HMM Modified: NF000074.1 299782349_fosC updated to NF000074.1 299782351_fosA-NCBI
cstrittmatter@0	1586 HMM Modified: NF000075.1 299782351_fosA updated to NF000075.1 354827590_fosA-NCBI
cstrittmatter@0	1587 HMM Modified: NF000076.3 APH_2pp_Ie_IVa updated to NF000076.3 APH_2pp_If_Ih-NCBI
cstrittmatter@0	1588 HMM Modified: NF000077.1 Erm42 updated to NF000077.1 Erm43-NCBI
cstrittmatter@0	1589 HMM Modified: NF000079.1 ANT_4p_Ib updated to NF000079.1 ANT_6-NCBI
cstrittmatter@0	1590 HMM Modified: NF000084.1 amicyc_ac_ApmA updated to NF000084.1 arsB_Sta_pI258-NCBI
cstrittmatter@0	1591 HMM Modified: NF000085.1 Fos_BSH_Saur updated to NF000085.1 Fos_BSH_Sepi-NCBI
cstrittmatter@0	1592 HMM Modified: NF000086.1 vanY_far updated to NF000086.1 vanY_of_D-NCBI
cstrittmatter@0	1593 HMM Modified: NF000087.1 ErmO updated to NF000087.1 ErmS-NCBI
cstrittmatter@0	1594 HMM Modified: NF000088.1 viomycin_Vph updated to NF000088.1 zbmA-NCBI
cstrittmatter@0	1595 HMM Modified: NF000089.1 qac_MFS_AB updated to NF000089.1 qac_SMR_C-NCBI
cstrittmatter@0	1596 HMM Modified: NF000090.1 trans_reg_VanU updated to NF000090.1 transloc_TIR-NCBI
cstrittmatter@0	1597 HMM Modified: NF000091.3 D_ala_D_ser_VanG updated to NF000091.3 D_ala_D_ser_VanL-NCBI
cstrittmatter@0	1598 HMM Modified: NF000092.1 D_ala_D_lac_Ao2 updated to NF000092.1 D_ala_D_lac_Sc-NCBI
cstrittmatter@0	1599 HMM Modified: NF000093.1 D_ala_D_ser_VanN updated to NF000093.1 EreA-NCBI
cstrittmatter@0	1600 HMM Modified: NF000094.1 354827590_fosA updated to NF000094.1 47473_otr-NCBI
cstrittmatter@0	1601 HMM Modified: NF000095.1 tet_MFS_OtrB updated to NF000095.1 tet_MFS_P_a-NCBI
cstrittmatter@0	1602 HMM Modified: NF000096.1 stregra_B_VgbB updated to NF000096.1 stregram_VatA-NCBI
cstrittmatter@0	1603 HMM Modified: NF000097.1 stregram_VatC updated to NF000097.1 stregram_VatD-NCBI
cstrittmatter@0	1604 HMM Modified: NF000098.1 Fos_BSH_Bcer updated to NF000098.1 Fos_BSH_Saur-NCBI
cstrittmatter@0	1605 HMM Modified: NF000100.2 AAC_2p_IIa updated to NF000100.2 AAC_2p_IIb-NCBI
cstrittmatter@0	1606 HMM Modified: NF000101.1 stregram_VatA updated to NF000101.1 stregram_VatC-NCBI
cstrittmatter@0	1607 HMM Modified: NF000103.1 tet_ABC_AB_B updated to NF000103.1 tet_MFS_38-NCBI
cstrittmatter@0	1608 HMM Modified: NF000107.2 APH_4_Ia updated to NF000107.2 APH_6-NCBI
cstrittmatter@0	1609 HMM Modified: NF000108.1 AAC_2p_Ia updated to NF000108.1 AAC_2p_Ib-NCBI
cstrittmatter@0	1610 HMM Modified: NF000109.2 trim_DfrA9 updated to NF000109.2 trim_DfrB-NCBI
cstrittmatter@0	1611 HMM Modified: NF000110.2 AAC_6p_If updated to NF000110.2 AAC_6p_Il-NCBI
cstrittmatter@0	1612 HMM Modified: NF000111.1 stregram_VatD updated to NF000111.1 stregram_VatE-NCBI
cstrittmatter@0	1613 HMM Modified: NF000112.1 vanH-Amyco updated to NF000112.1 vanH-D-NCBI
cstrittmatter@0	1614 HMM Modified: NF000113.1 16S_rRNA_Rmt_F updated to NF000113.1 16S_rRNA_Rmt_G-NCBI
cstrittmatter@0	1615 HMM Modified: NF000114.1 16S_rRNA_Rmt_G updated to NF000114.1 16S_rRNA_Rmt_H-NCBI
cstrittmatter@0	1616 HMM Modified: NF000115.2 AAC_6p_Iad updated to NF000115.2 AAC_6p_Iak-NCBI
cstrittmatter@0	1617 HMM Modified: NF000116.1 16S_rRNA_Rmt_H updated to NF000116.1 16S_rRNA_Rmt_gen-NCBI
cstrittmatter@0	1618 HMM Modified: NF000118.3 AAC_6p_A31 updated to NF000118.3 AAC_6p_A34-NCBI
cstrittmatter@0	1619 HMM Modified: NF000119.1 linco_LnuF updated to NF000119.1 linco_LnuG-NCBI
cstrittmatter@0	1620 HMM Modified: NF000120.3 47473_otr updated to NF000120.3 485965_fosC-NCBI
cstrittmatter@0	1621 HMM Modified: NF000122.1 485965_fosC updated to NF000122.1 491618165_fosA-NCBI
cstrittmatter@0	1622 HMM Modified: NF000123.2 AAC_6p_A34 updated to NF000123.2 AAC_6p_A37-NCBI
cstrittmatter@0	1623 HMM Modified: NF000124.1 491618165_fosA updated to NF000124.1 498180014_fosA-NCBI
cstrittmatter@0	1624 HMM Modified: NF000125.1 498180014_fosA updated to NF000125.1 AAC_2p_IIa-NCBI
cstrittmatter@0	1625 HMM Modified: NF000126.2 trim_DfrA8 updated to NF000126.2 trim_DfrA9-NCBI
cstrittmatter@0	1626 HMM Modified: NF000127.2 trim_DfrA20 updated to NF000127.2 trim_DfrA23-NCBI
cstrittmatter@0	1627 HMM Modified: NF000128.1 vanH-Sc updated to NF000128.1 vanH_Agroup-NCBI
cstrittmatter@0	1628 HMM Modified: NF000129.1 D_ala_D_lac_Sc updated to NF000129.1 D_ala_D_lac_VanA-NCBI
cstrittmatter@0	1629 HMM Modified: NF000131.1 MATE_multi_MepA updated to NF000131.1 MATE_multi_NorM-NCBI
cstrittmatter@0	1630 HMM Modified: NF000132.2 APH_2pp_Ig updated to NF000132.2 APH_3p-NCBI
cstrittmatter@0	1631 HMM Modified: NF000133.1 Erm32 updated to NF000133.1 Erm37-NCBI
cstrittmatter@0	1632 HMM Modified: NF000134.2 trim_DfrA23 updated to NF000134.2 trim_DfrA24-NCBI
cstrittmatter@0	1633 HMM Modified: NF000135.2 AAC_6p_IIc updated to NF000135.2 AAC_6p_Ia_fam-NCBI
cstrittmatter@0	1634 HMM Modified: NF000137.2 APH_7pp_Ia updated to NF000137.2 APH_9_Ia-NCBI
cstrittmatter@0	1635 HMM Modified: NF000138.1 AAC_6p_Iz updated to NF000138.1 AAC_6p_Serra-NCBI
cstrittmatter@0	1636 HMM Modified: NF000139.2 penta_rpt_QnrD updated to NF000139.2 penta_rpt_QnrE-NCBI
cstrittmatter@0	1637 HMM Modified: NF000141.1 linco_LnuC updated to NF000141.1 linco_LnuD-NCBI
cstrittmatter@0	1638 HMM Modified: NF000142.1 vanZ-Pt updated to NF000142.1 viomycin_Vph-NCBI
cstrittmatter@0	1639 HMM Modified: NF000143.1 trim_DfrG updated to NF000143.1 trim_DfrI-NCBI
cstrittmatter@0	1640 HMM Modified: NF000144.1 D_ala_D_lac_VanF updated to NF000144.1 D_ala_D_lac_VanI-NCBI
cstrittmatter@0	1641 HMM Modified: NF000145.1 vanZ-F updated to NF000145.1 vanZ-Pt-NCBI
cstrittmatter@0	1642 HMM Modified: NF000146.2 trim_DfrA24 updated to NF000146.2 trim_DfrA26-NCBI
cstrittmatter@0	1643 HMM Modified: NF000147.1 stregram_VatF updated to NF000147.1 stregram_VatH-NCBI
cstrittmatter@0	1644 HMM Modified: NF000148.1 SMR_qac_pB8 updated to NF000148.1 Shiga_Stx1A-NCBI
cstrittmatter@0	1645 HMM Modified: NF000149.1 vanXY_G updated to NF000149.1 vanY_AFMPt-NCBI
cstrittmatter@0	1646 HMM Modified: NF000150.1 16S_rRNA_Rmt_C updated to NF000150.1 16S_rRNA_Rmt_D-NCBI
cstrittmatter@0	1647 HMM Modified: NF000151.1 vanH-Ac1 updated to NF000151.1 vanH-Amyco-NCBI
cstrittmatter@0	1648 HMM Modified: NF000152.2 AAC_6p_A37 updated to NF000152.2 AAC_6p_A40-NCBI
cstrittmatter@0	1649 HMM Modified: NF000153.1 linco_LnuAN2 updated to NF000153.1 linco_LnuB-NCBI
cstrittmatter@0	1650 HMM Modified: NF000154.1 macrolide_MefEN2 updated to NF000154.1 macrolide_MphA-NCBI
cstrittmatter@0	1651 HMM Modified: NF000155.1 trim_DfrC updated to NF000155.1 trim_DfrD-NCBI
cstrittmatter@0	1652 HMM Modified: NF000157.1 fusid_est_FusH updated to NF000157.1 glycotrans_Rgt-NCBI
cstrittmatter@0	1653 HMM Modified: NF000158.2 AAC_6p_Il updated to NF000158.2 AAC_6p_Im-NCBI
cstrittmatter@0	1654 HMM Modified: NF000159.1 trim_DfrD updated to NF000159.1 trim_DfrDGK-NCBI
cstrittmatter@0	1655 HMM Modified: NF000165.3 AAC_6p_Entco updated to NF000165.3 AAC_6p_IIc-NCBI
cstrittmatter@0	1656 HMM Modified: NF000166.1 ABCF_CarA updated to NF000166.1 ABCF_Lsa_all-NCBI
cstrittmatter@0	1657 HMM Modified: NF000167.1 ABCF_Lsa_all updated to NF000167.1 ABCF_Msr_all-NCBI
cstrittmatter@0	1658 HMM Modified: NF000168.1 ABCF_Msr_all updated to NF000168.1 ABCF_OptrA-NCBI
cstrittmatter@0	1659 HMM Modified: NF000169.1 ABCF_Sal updated to NF000169.1 ABCF_Vga_all-NCBI
cstrittmatter@0	1660 HMM Modified: NF000170.1 ABCF_Vga_all updated to NF000170.1 ABCF_producer-NCBI
cstrittmatter@0	1661 HMM Modified: NF000171.1 ABCF_producer updated to NF000171.1 ANT_2pp_Ia-NCBI
cstrittmatter@0	1662 HMM Modified: NF000181.1 ANT_4p_Ia updated to NF000181.1 ANT_4p_Ib-NCBI
cstrittmatter@0	1663 HMM Modified: NF000185.2 BlaEC updated to NF000185.2 BlaI_of_MRSA-NCBI
cstrittmatter@0	1664 HMM Modified: NF000186.1 BlaI_of_MRSA updated to NF000186.1 BlaMIR-NCBI
cstrittmatter@0	1665 HMM Modified: NF000187.3 BlaMIR updated to NF000187.3 BlmB-NCBI
cstrittmatter@0	1666 HMM Modified: NF000188.2 CARB updated to NF000188.2 CAR_gen_B3-NCBI
cstrittmatter@0	1667 HMM Modified: NF000191.1 CMY2 updated to NF000191.1 CfrAB-NCBI
cstrittmatter@0	1668 HMM Modified: NF000206.1 D_ala_D_lac updated to NF000206.1 D_ala_D_lac_Ao2-NCBI
cstrittmatter@0	1669 HMM Modified: NF000207.3 D_ala_D_ser updated to NF000207.3 D_ala_D_ser_VanC-NCBI
cstrittmatter@0	1670 HMM Modified: NF000208.1 EreA updated to NF000208.1 EreB-NCBI
cstrittmatter@0	1671 HMM Modified: NF000209.1 EreB updated to NF000209.1 EreD-NCBI
cstrittmatter@0	1672 HMM Modified: NF000216.2 blaFEZ updated to NF000216.2 blaFIM-NCBI
cstrittmatter@0	1673 HMM Modified: NF000218.1 FexA updated to NF000218.1 FloR-NCBI
cstrittmatter@0	1674 HMM Modified: NF000219.1 FloR updated to NF000219.1 FosA-NCBI
cstrittmatter@0	1675 HMM Modified: NF000221.4 FosA updated to NF000221.4 FosF-NCBI
cstrittmatter@0	1676 HMM Modified: NF000222.1 FosX updated to NF000222.1 Fos_BSH-NCBI
cstrittmatter@0	1677 HMM Modified: NF000224.3 AAC_6p_Acine updated to NF000224.3 AAC_6p_Entco-NCBI
cstrittmatter@0	1678 HMM Modified: NF000225.3 AAC_6p_Strep updated to NF000225.3 AAC_6p_Yersi-NCBI
cstrittmatter@0	1679 HMM Modified: NF000232.1 L2 updated to NF000232.1 LEN-NCBI
cstrittmatter@0	1680 HMM Modified: NF000233.2 LEN updated to NF000233.2 MATE_multi_MepA-NCBI
cstrittmatter@0	1681 HMM Modified: NF000235.3 linco_LnuB updated to NF000235.3 linco_LnuC-NCBI
cstrittmatter@0	1682 HMM Modified: NF000236.1 linco_LnuA updated to NF000236.1 linco_LnuAN2-NCBI
cstrittmatter@0	1683 HMM Modified: NF000237.1 MECA_PBP2A updated to NF000237.1 MECA_pure-NCBI
cstrittmatter@0	1684 HMM Modified: NF000239.3 MOX_CMY1_fam updated to NF000239.3 MPH_3-NCBI
cstrittmatter@0	1685 HMM Modified: NF000240.1 macrolide_MphC updated to NF000240.1 macrolide_MphE-NCBI
cstrittmatter@0	1686 HMM Modified: NF000241.1 MPH_3 updated to NF000241.1 MecI_of_mecA-NCBI
cstrittmatter@0	1687 HMM Modified: NF000242.1 macrolide_MphB updated to NF000242.1 macrolide_MphC-NCBI
cstrittmatter@0	1688 HMM Modified: NF000243.1 MecI_of_mecA updated to NF000243.1 MecI_of_mecC-NCBI
cstrittmatter@0	1689 HMM Modified: NF000244.1 MecI_of_mecC updated to NF000244.1 MerA-TIGRFAMs
cstrittmatter@0	1690 HMM Modified: NF000245.1 macrolide_MefA updated to NF000245.1 macrolide_MefB-NCBI
cstrittmatter@0	1691 HMM Modified: NF000246.1 macrolide_MefC updated to NF000246.1 macrolide_MefEN2-NCBI
cstrittmatter@0	1692 HMM Modified: NF000249.1 MexE updated to NF000249.1 MexX-Resfams
cstrittmatter@0	1693 HMM Modified: NF000254.1 macrolide_MphA updated to NF000254.1 macrolide_MphB-NCBI
cstrittmatter@0	1694 HMM Modified: NF000255.1 macrolide_MphF updated to NF000255.1 merT_RC607-NCBI
cstrittmatter@0	1695 HMM Modified: NF000256.1 MsrSA updated to NF000256.1 MupA-NCBI
cstrittmatter@0	1696 HMM Modified: NF000257.1 MupA updated to NF000257.1 MupB-NCBI
cstrittmatter@0	1697 HMM Modified: NF000258.1 MupB updated to NF000258.1 NimABCDEF-NCBI
cstrittmatter@0	1698 HMM Modified: NF000259.2 blaNDM updated to NF000259.2 blaOCH-NCBI
cstrittmatter@0	1699 HMM Modified: NF000261.1 NimABCDEF updated to NF000261.1 NimIJ-NCBI
cstrittmatter@0	1700 HMM Modified: NF000262.1 NimIJ updated to NF000262.1 NshR_TsnR-NCBI
cstrittmatter@0	1701 HMM Modified: NF000263.1 MATE_multi_NorM updated to NF000263.1 MECA1_pure-NCBI
cstrittmatter@0	1702 HMM Modified: NF000264.2 blaOCH updated to NF000264.2 blaOXA-10_like-NCBI
cstrittmatter@0	1703 HMM Modified: NF000265.2 OKP updated to NF000265.2 OqxA_adapt_sub-NCBI
cstrittmatter@0	1704 HMM Modified: NF000266.2 blaOXA-23_like updated to NF000266.2 blaOXA-24_like-NCBI
cstrittmatter@0	1705 HMM Modified: NF000267.2 blaOXA-2_like updated to NF000267.2 blaOXA-364_like-NCBI
cstrittmatter@0	1706 HMM Modified: NF000268.2 blaOXA-51_like updated to NF000268.2 blaOXA-55_like-NCBI
cstrittmatter@0	1707 HMM Modified: NF000269.2 blaOXA-213_like updated to NF000269.2 blaOXA-214_like-NCBI
cstrittmatter@0	1708 HMM Modified: NF000270.1 bla_class_D_alt updated to NF000270.1 bla_class_D_main-NCBI
cstrittmatter@0	1709 HMM Modified: NF000271.2 blaOXY updated to NF000271.2 blaP-NCBI
cstrittmatter@0	1710 HMM Modified: NF000272.1 OqxA_adapt_sub updated to NF000272.1 PRK10026.1-PRKfam
cstrittmatter@0	1711 HMM Modified: NF000275.2 blaPLA_ORN_TER updated to NF000275.2 blaPME-NCBI
cstrittmatter@0	1712 HMM Modified: NF000276.2 SMR_qac_E updated to NF000276.2 SMR_qac_FL-NCBI
cstrittmatter@0	1713 HMM Modified: NF000277.1 qac_SMR_G updated to NF000277.1 qac_SMR_H-NCBI
cstrittmatter@0	1714 HMM Modified: NF000278.1 SMR_qac_G2 updated to NF000278.1 SMR_qac_K-NCBI
cstrittmatter@0	1715 HMM Modified: NF000279.1 qac_SMR_H updated to NF000279.1 qac_SMR_J-NCBI
cstrittmatter@0	1716 HMM Modified: NF000280.1 SMR_efflux_smr updated to NF000280.1 SMR_qac_E-NCBI
cstrittmatter@0	1717 HMM Modified: NF000283.1 RPH_KJ151292.1 updated to NF000283.1 RTG-NCBI
cstrittmatter@0	1718 HMM Modified: NF000284.1 RTG updated to NF000284.1 SHV-NCBI
cstrittmatter@0	1719 HMM Modified: NF000285.3 SHV updated to NF000285.3 SHV_LEN_OKP-NCBI
cstrittmatter@0	1720 HMM Modified: NF000287.1 SMB1_fam updated to NF000287.1 SMR_efflux_smr-NCBI
cstrittmatter@0	1721 HMM Modified: NF000294.1 Sul1 updated to NF000294.1 Sul2-NCBI
cstrittmatter@0	1722 HMM Modified: NF000295.1 Sul2 updated to NF000295.1 Sul3-NCBI
cstrittmatter@0	1723 HMM Modified: NF000296.1 Sul3 updated to NF000296.1 Sul4-NCBI
cstrittmatter@0	1724 HMM Modified: NF000298.2 blaTLA updated to NF000298.2 blaTMB-NCBI
cstrittmatter@0	1725 HMM Modified: NF000311.1 Vat_ABCDEFH updated to NF000311.1 aadE-Cc-NCBI
cstrittmatter@0	1726 HMM Modified: NF000312.1 ANT_6_aadK updated to NF000312.1 ANT_6_aadS-NCBI
cstrittmatter@0	1727 HMM Modified: NF000318.1 rifampin_ARR_Ms updated to NF000318.1 rifampin_ARR_Sa-NCBI
cstrittmatter@0	1728 HMM Modified: NF000320.2 betalact_A_Burk_PenA updated to NF000320.2 betalact_A_Burk_PenI-NCBI
cstrittmatter@0	1729 HMM Modified: NF000321.2 betalact_A_Burk_PenI updated to NF000321.2 bla-A_Chryseo-NCBI
cstrittmatter@0	1730 HMM Modified: NF000322.2 blaCcrA updated to NF000322.2 blaDHA-NCBI
cstrittmatter@0	1731 HMM Modified: NF000323.2 blaFONA updated to NF000323.2 blaFOX-NCBI
cstrittmatter@0	1732 HMM Modified: NF000324.2 blaLUT updated to NF000324.2 blaMCA-NCBI
cstrittmatter@0	1733 HMM Modified: NF000326.1 blaR1_generic updated to NF000326.1 blaRCP-NCBI
cstrittmatter@0	1734 HMM Modified: NF000327.2 blaSCO updated to NF000327.2 blaSED-NCBI
cstrittmatter@0	1735 HMM Modified: NF000328.2 blaSED updated to NF000328.2 blaSFH-NCBI
cstrittmatter@0	1736 HMM Modified: NF000329.2 bla_B2_CphA updated to NF000329.2 bla_Bc_2-NCBI
cstrittmatter@0	1737 HMM Modified: NF000330.1 trim_DfrA1_like updated to NF000330.1 trim_DfrA1_rpt-NCBI
cstrittmatter@0	1738 HMM Modified: NF000331.1 trim_DfrB updated to NF000331.1 trim_DfrC-NCBI
cstrittmatter@0	1739 HMM Modified: NF000332.1 trim_DfrDGK updated to NF000332.1 trim_DfrE-NCBI
cstrittmatter@0	1740 HMM Modified: NF000333.1 trim_DfrF updated to NF000333.1 trim_DfrG-NCBI
cstrittmatter@0	1741 HMM Modified: NF000336.1 emrE updated to NF000336.1 erm_38_23S_MT-NCBI
cstrittmatter@0	1742 HMM Modified: NF000337.1 erm_SHROVE updated to NF000337.1 fomA_AB016934.1.gene6-NCBI
cstrittmatter@0	1743 HMM Modified: NF000338.1 fomA_AB016934.1.gene6 updated to NF000338.1 fos-Crono-NCBI
cstrittmatter@0	1744 HMM Modified: NF000339.2 fos-Crono updated to NF000339.2 fosA7-NCBI
cstrittmatter@0	1745 HMM Modified: NF000340.1 fusB updated to NF000340.1 fusC-NCBI
cstrittmatter@0	1746 HMM Modified: NF000341.1 fusC updated to NF000341.1 fusD-NCBI
cstrittmatter@0	1747 HMM Modified: NF000343.1 rif_mono_Iri updated to NF000343.1 rif_monoox-NCBI
cstrittmatter@0	1748 HMM Modified: NF000354.1 glycotrans_Rgt updated to NF000354.1 intimin_all-NCBI
cstrittmatter@0	1749 HMM Modified: NF000355.3 ribo_prot_ABC_F updated to NF000355.3 rif_mono_Iri-NCBI
cstrittmatter@0	1750 HMM Modified: NF000358.1 sat2 updated to NF000358.1 sat3-NCBI
cstrittmatter@0	1751 HMM Modified: NF000359.1 sat3 updated to NF000359.1 sat4-NCBI
cstrittmatter@0	1752 HMM Modified: NF000360.1 sat4 updated to NF000360.1 self_FomB_kinase-NCBI
cstrittmatter@0	1753 HMM Modified: NF000361.1 self_FomB_kinase updated to NF000361.1 self_GT_OleI-NCBI
cstrittmatter@0	1754 HMM Modified: NF000362.1 self_GT_OleI updated to NF000362.1 self_KamB-NCBI
cstrittmatter@0	1755 HMM Modified: NF000363.1 self_KamB updated to NF000363.1 sensor_BlaR1-NCBI
cstrittmatter@0	1756 HMM Modified: NF000371.1 vanH_Agroup updated to NF000371.1 vanH_gen-NCBI
cstrittmatter@0	1757 HMM Modified: NF000372.1 D_ala_D_lac_VanI updated to NF000372.1 D_ala_D_lac_VanM-NCBI
cstrittmatter@0	1758 HMM Modified: NF000373.1 vanJ updated to NF000373.1 vanR-A-NCBI
cstrittmatter@0	1759 HMM Modified: NF000374.1 D_ala_D_lac_VanO updated to NF000374.1 D_ala_D_ser-NCBI
cstrittmatter@0	1760 HMM Modified: NF000380.1 vanXY updated to NF000380.1 vanXY_G-NCBI
cstrittmatter@0	1761 HMM Modified: NF000383.2 blaLAP updated to NF000383.2 blaLHK-NCBI
cstrittmatter@0	1762 HMM Modified: NF000384.1 QacCGHJ updated to NF000384.1 RND_adapt_MexA-NCBI
cstrittmatter@0	1763 HMM Modified: NF000385.4 blaACT updated to NF000385.4 blaADC-NCBI
cstrittmatter@0	1764 HMM Modified: NF000386.2 blaOXA-10_like updated to NF000386.2 blaOXA-114_like-NCBI
cstrittmatter@0	1765 HMM Modified: NF000387.2 blaOXA-48_like updated to NF000387.2 blaOXA-493_like-NCBI
cstrittmatter@0	1766 HMM Modified: NF000388.2 blaOXA-1_like updated to NF000388.2 blaOXA-211_like-NCBI
cstrittmatter@0	1767 HMM Modified: NF000389.2 blaPER updated to NF000389.2 blaPLA_ORN_TER-NCBI
cstrittmatter@0	1768 HMM Modified: NF000390.2 blaVEB updated to NF000390.2 blaVIM-NCBI
cstrittmatter@0	1769 HMM Modified: NF000395.3 blaOXA-60_like updated to NF000395.3 blaOXA-61_like-NCBI
cstrittmatter@0	1770 HMM Modified: NF000396.2 blaGIM updated to NF000396.2 blaGOB-NCBI
cstrittmatter@0	1771 HMM Modified: NF000397.2 blaACC updated to NF000397.2 blaACI-NCBI
cstrittmatter@0	1772 HMM Modified: NF000398.2 blaBEL updated to NF000398.2 blaBES-NCBI
cstrittmatter@0	1773 HMM Modified: NF000399.2 blaFOX updated to NF000399.2 blaFRI-NCBI
cstrittmatter@0	1774 HMM Modified: NF000400.2 blaIMI updated to NF000400.2 blaIMP-NCBI
cstrittmatter@0	1775 HMM Modified: NF000401.1 vanR-A updated to NF000401.1 vanR-B-NCBI
cstrittmatter@0	1776 HMM Modified: NF000402.1 vanR-B updated to NF000402.1 vanR-C-NCBI
cstrittmatter@0	1777 HMM Modified: NF000403.1 vanR-C updated to NF000403.1 vanR-D-NCBI
cstrittmatter@0	1778 HMM Modified: NF000404.1 vanR-D updated to NF000404.1 vanR-O-NCBI
cstrittmatter@0	1779 HMM Modified: NF000405.1 HARLDQ_not_B3 updated to NF000405.1 HK_VanS_ACDEFG-NCBI
cstrittmatter@0	1780 HMM Modified: NF000406.1 MECB_PBP updated to NF000406.1 MECC_PBP-NCBI
cstrittmatter@0	1781 HMM Modified: NF000407.1 MECC_PBP updated to NF000407.1 MECD_PBP-NCBI
cstrittmatter@0	1782 HMM Modified: NF000408.1 MECA2_pure updated to NF000408.1 MECA_PBP2A-NCBI
cstrittmatter@0	1783 HMM Modified: NF000409.1 MECA_pure updated to NF000409.1 MECB_PBP-NCBI
cstrittmatter@0	1784 HMM Modified: NF000410.1 MECA1_pure updated to NF000410.1 MECA2_pure-NCBI
cstrittmatter@0	1785 HMM Modified: NF000411.1 Erm45 updated to NF000411.1 ErmO-NCBI
cstrittmatter@0	1786 HMM Modified: NF000412.1 Erm43 updated to NF000412.1 Erm45-NCBI
cstrittmatter@0	1787 HMM Modified: NF000413.2 blaBKC updated to NF000413.2 blaBKC_GPC-NCBI
cstrittmatter@0	1788 HMM Modified: NF000414.2 blaPME updated to NF000414.2 blaPOM-NCBI
cstrittmatter@0	1789 HMM Modified: NF000415.2 blaOXA-372_like updated to NF000415.2 blaOXA-46_like-NCBI
cstrittmatter@0	1790 HMM Modified: NF000417.2 blaOXA-211_like updated to NF000417.2 blaOXA-213_like-NCBI
cstrittmatter@0	1791 HMM Modified: NF000418.2 blaOXA-214_like updated to NF000418.2 blaOXA-229_like-NCBI
cstrittmatter@0	1792 HMM Modified: NF000419.2 blaCMH updated to NF000419.2 blaCPS-NCBI
cstrittmatter@0	1793 HMM Modified: NF000420.1 penta_rpt_QnrB updated to NF000420.1 penta_rpt_QnrC-NCBI
cstrittmatter@0	1794 HMM Modified: NF000421.1 penta_rpt_QnrVC updated to NF000421.1 phenyl_MerG-NCBI
cstrittmatter@0	1795 HMM Modified: NF000422.6 blaPDC updated to NF000422.6 blaPDC_var-NCBI
cstrittmatter@0	1796 HMM Modified: NF000423.2 blaSRT updated to NF000423.2 blaTEM-NCBI
cstrittmatter@0	1797 HMM Modified: NF000424.3 CfrAB updated to NF000424.3 D_ala_D_lac-NCBI
cstrittmatter@0	1798 HMM Modified: NF000425.2 blaADC updated to NF000425.2 blaAFM-NCBI
cstrittmatter@0	1799 HMM Modified: NF000426.2 blaSIM updated to NF000426.2 blaSME-NCBI
cstrittmatter@0	1800 HMM Modified: NF000427.2 blaCAU updated to NF000427.2 blaCBP-NCBI
cstrittmatter@0	1801 HMM Modified: NF000428.4 blaFRI updated to NF000428.4 blaFTU-NCBI
cstrittmatter@0	1802 HMM Modified: NF000429.2 blaOXA-63_like updated to NF000429.2 blaOXA-727_like-NCBI
cstrittmatter@0	1803 HMM Modified: NF000430.2 blaOXA-62_like updated to NF000430.2 blaOXA-63_like-NCBI
cstrittmatter@0	1804 HMM Modified: NF000431.1 AAC_6p_Ian updated to NF000431.1 AAC_6p_Ib-NCBI
cstrittmatter@0	1805 HMM Modified: NF000432.2 blaOXA-50_like updated to NF000432.2 blaOXA-51_like-NCBI
cstrittmatter@0	1806 HMM Modified: NF000434.2 blaOXA-24_like updated to NF000434.2 blaOXA-266_fam-NCBI
cstrittmatter@0	1807 HMM Modified: NF000435.2 blaOXA-61_like updated to NF000435.2 blaOXA-62_like-NCBI
cstrittmatter@0	1808 HMM Modified: NF000436.2 blaOXA-134_like updated to NF000436.2 blaOXA-143_like-NCBI
cstrittmatter@0	1809 HMM Modified: NF000437.2 blaFIM updated to NF000437.2 blaFONA-NCBI
cstrittmatter@0	1810 HMM Modified: NF000438.2 blaPOM updated to NF000438.2 blaPST-NCBI
cstrittmatter@0	1811 HMM Modified: NF000439.2 blaAIM updated to NF000439.2 blaALI-NCBI
cstrittmatter@0	1812 HMM Modified: NF000440.2 blaTHIN updated to NF000440.2 blaTLA-NCBI
cstrittmatter@0	1813 HMM Modified: NF000441.2 blaMUS updated to NF000441.2 blaNDM-NCBI
cstrittmatter@0	1814 HMM Modified: NF000442.2 blaTUS updated to NF000442.2 blaVCC-NCBI
cstrittmatter@0	1815 HMM Modified: NF000443.2 blaTMB updated to NF000443.2 blaTTU-NCBI
cstrittmatter@0	1816 HMM Modified: NF000444.2 blaEBR updated to NF000444.2 blaESP-1_fam-NCBI
cstrittmatter@0	1817 HMM Modified: NF000445.2 blaDIM updated to NF000445.2 blaDIM_SIM_IMP-NCBI
cstrittmatter@0	1818 HMM Modified: NF000446.2 blaCIA updated to NF000446.2 blaCMA-NCBI
cstrittmatter@0	1819 HMM Modified: NF000447.2 bla-A_Chryseo updated to NF000447.2 bla-B1-FLAV-NCBI
cstrittmatter@0	1820 HMM Modified: NF000448.2 blaACI updated to NF000448.2 blaACT-NCBI
cstrittmatter@0	1821 HMM Modified: NF000449.2 blaBIC updated to NF000449.2 blaBJP-NCBI
cstrittmatter@0	1822 HMM Modified: NF000450.2 bla-B1-FLAV updated to NF000450.2 bla1-NCBI
cstrittmatter@0	1823 HMM Modified: NF000451.2 blaBES updated to NF000451.2 blaBIC-NCBI
cstrittmatter@0	1824 HMM Modified: NF000452.2 blaKLUC updated to NF000452.2 blaKPC-NCBI
cstrittmatter@0	1825 HMM Modified: NF000453.2 blaPEDO-3_fam updated to NF000453.2 blaPER-NCBI
cstrittmatter@0	1826 HMM Modified: NF000454.2 blaCPS updated to NF000454.2 blaCRH-NCBI
cstrittmatter@0	1827 HMM Modified: NF000455.2 blaESP-1_fam updated to NF000455.2 blaFEZ-NCBI
cstrittmatter@0	1828 HMM Modified: NF000456.2 blaMSI-1_fam updated to NF000456.2 blaMUS-NCBI
cstrittmatter@0	1829 HMM Modified: NF000457.2 blaPEDO-1_fam updated to NF000457.2 blaPEDO-2_fam-NCBI
cstrittmatter@0	1830 HMM Modified: NF000458.2 blaPEDO-2_fam updated to NF000458.2 blaPEDO-3_fam-NCBI
cstrittmatter@0	1831 HMM Modified: NF000459.2 blaSPG-1_fam updated to NF000459.2 blaSPM-NCBI
cstrittmatter@0	1832 HMM Modified: NF000460.1 fusD updated to NF000460.1 fusF-NCBI
cstrittmatter@0	1833 HMM Modified: NF000461.2 blaOXA-184_like updated to NF000461.2 blaOXA-1_like-NCBI
cstrittmatter@0	1834 HMM Modified: NF000462.2 blaOXA-493_like updated to NF000462.2 blaOXA-50_like-NCBI
cstrittmatter@0	1835 HMM Modified: NF000463.2 blaOXA_Campylobacter updated to NF000463.2 blaOXY-NCBI
cstrittmatter@0	1836 HMM Modified: NF000464.2 blaOXA-143_like updated to NF000464.2 blaOXA-184_like-NCBI
cstrittmatter@0	1837 HMM Modified: NF000465.1 polymyxin_MCR1 updated to NF000465.1 polymyxin_MCR2-NCBI
cstrittmatter@0	1838 HMM Modified: NF000466.2 16S_rRNA_Rmt_gen updated to NF000466.2 299782349_fosC-NCBI
cstrittmatter@0	1839 HMM Modified: NF000467.1 FosG updated to NF000467.1 FosK-NCBI
cstrittmatter@0	1840 HMM Modified: NF000468.1 Erm37 updated to NF000468.1 Erm42-NCBI
cstrittmatter@0	1841 HMM Modified: NF000469.2 CAR_gen_B3 updated to NF000469.2 CHL_hydrolase-NCBI
cstrittmatter@0	1842 HMM Modified: NF000470.1 D_ala_D_lac_VanM updated to NF000470.1 D_ala_D_lac_VanO-NCBI
cstrittmatter@0	1843 HMM Modified: NF000471.1 vanY_of_D updated to NF000471.1 vanZ-A-NCBI
cstrittmatter@0	1844 HMM Modified: NF000472.1 vanY_AFMPt updated to NF000472.1 vanY_BG-NCBI
cstrittmatter@0	1845 HMM Modified: NF000473.1 vanY_BG updated to NF000473.1 vanY_far-NCBI
cstrittmatter@0	1846 HMM Modified: NF000474.1 tet_ABC_46_A updated to NF000474.1 tet_ABC_46_B-NCBI
cstrittmatter@0	1847 HMM Modified: NF000475.1 tet_ABC_46_B updated to NF000475.1 tet_ABC_AB_A-NCBI
cstrittmatter@0	1848 HMM Modified: NF000476.1 myrA updated to NF000476.1 nosihep_NshR-NCBI
cstrittmatter@0	1849 HMM Modified: NF000477.1 NshR_TsnR updated to NF000477.1 OKP-NCBI
cstrittmatter@0	1850 HMM Modified: NF000478.2 linco_LnuE updated to NF000478.2 linco_LnuF-NCBI
cstrittmatter@0	1851 HMM Modified: NF000479.1 zbmA updated to NF000479.1
cstrittmatter@0	1852 HMM Modified: NF000480.2 PSE updated to NF000480.2 P_eth_NH2_trans-NCBI
cstrittmatter@0	1853 HMM Modified: NF000481.1 carbeni_gen updated to NF000481.1 chaper_CopP-NCBI
cstrittmatter@0	1854 HMM Modified: NF000482.1 AAC_3_XI updated to NF000482.1 AAC_6p_A10-NCBI
cstrittmatter@0	1855 HMM Modified: NF000483.1 BlmB updated to NF000483.1 CARB-NCBI
cstrittmatter@0	1856 HMM Modified: NF000485.1 TlmB updated to NF000485.1 VanC1_ser_lig-NCBI
cstrittmatter@0	1857 HMM Modified: NF000486.1 AAC_6p_Ip updated to NF000486.1 AAC_6p_Iz-NCBI
cstrittmatter@0	1858 HMM Modified: NF000487.1 stat updated to NF000487.1 stregra_B_VgbA-NCBI
cstrittmatter@0	1859 HMM Modified: NF000488.1 chrB updated to NF000488.1 classA_carba-NCBI
cstrittmatter@0	1860 HMM Modified: NF000489.1 ble_Sh updated to NF000489.1 carbeni_gen-NCBI
cstrittmatter@0	1861 HMM Modified: NF000490.1 chloram_CatB updated to NF000490.1 chrB-NCBI
cstrittmatter@0	1862 HMM Modified: NF000491.1 chloram_CatA updated to NF000491.1 chloram_CatB-NCBI
cstrittmatter@0	1863 HMM Modified: NF000492.1 vanH_gen updated to NF000492.1 vanJ-NCBI
cstrittmatter@0	1864 HMM Modified: NF000493.1 Fos_BSH updated to NF000493.1 Fos_BSH_Bcer-NCBI
cstrittmatter@0	1865 HMM Modified: NF000494.1 FosF updated to NF000494.1 FosG-NCBI
cstrittmatter@0	1866 HMM Modified: NF000495.1 FosK updated to NF000495.1 FosL-NCBI
cstrittmatter@0	1867 HMM Modified: NF000496.1 Fos_GSH updated to NF000496.1 HARLDQ_not_B3-NCBI
cstrittmatter@0	1868 HMM Modified: NF000497.1 AAC_6p_Iak updated to NF000497.1 AAC_6p_Ian-NCBI
cstrittmatter@0	1869 HMM Modified: NF000498.2 APH_2pp_If_Ih updated to NF000498.2 APH_2pp_Ig-NCBI
cstrittmatter@0	1870 HMM Modified: NF000499.1 Erm23S_rRNA_broad updated to NF000499.1 Erm32-NCBI
cstrittmatter@0	1871 HMM Modified: NF000500.2 blaOXA-58_like updated to NF000500.2 blaOXA-60_like-NCBI
cstrittmatter@0	1872 HMM Modified: NF000501.2 blaOXA-229_like updated to NF000501.2 blaOXA-22_like-NCBI
cstrittmatter@0	1873 HMM Modified: NF000502.2 blaOXA-85_like updated to NF000502.2 blaOXA_Campylobacter-NCBI
cstrittmatter@0	1874 HMM Modified: NF000503.1 fusF updated to NF000503.1 fusid_est_FusH-NCBI
cstrittmatter@0	1875 HMM Modified: NF000504.1 stregram_VatH updated to NF000504.1 stregram_VatI-NCBI
cstrittmatter@0	1876 HMM Modified: NF000505.2 blaGIL updated to NF000505.2 blaGIM-NCBI
cstrittmatter@0	1877 HMM Modified: NF000506.1 tet_ABC_AB_A updated to NF000506.1 tet_ABC_AB_B-NCBI
cstrittmatter@0	1878 HMM Modified: NF000507.1 AAC_6p_Ie updated to NF000507.1 AAC_6p_Ie_fam-NCBI
cstrittmatter@0	1879 HMM Modified: NF000508.1 APH_2pp_Ia updated to NF000508.1 APH_2pp_Ie_IVa-NCBI
cstrittmatter@0	1880 HMM Modified: NF000509.1 efflux_CmlA updated to NF000509.1 efflux_Cmx-NCBI
cstrittmatter@0	1881 HMM Modified: NF000510.1 efflux_Cmx updated to NF000510.1 efflux_OM_AdeC-NCBI
cstrittmatter@0	1882 HMM Modified: NF000511.2 blaCME updated to NF000511.2 blaCMH-NCBI
cstrittmatter@0	1883 HMM Modified: NF000512.2 blaSGM updated to NF000512.2 blaSIM-NCBI
cstrittmatter@0	1884 HMM Modified: NF000513.2 blaFTU updated to NF000513.2 blaGES-NCBI
cstrittmatter@0	1885 HMM Modified: NF000514.1 ABCF_OptrA updated to NF000514.1 ABCF_Sal-NCBI
cstrittmatter@0	1886 HMM Modified: NF000516.1 EreD updated to NF000516.1 Erm23S_rRNA_broad-NCBI
cstrittmatter@0	1887 HMM Modified: NF000517.2 blaCBP updated to NF000517.2 blaCDD-NCBI
cstrittmatter@0	1888 HMM Modified: NF000518.2 blaVCC updated to NF000518.2 blaVEB-NCBI
cstrittmatter@0	1889 HMM Modified: NF000519.2 blaPDC_var updated to NF000519.2 blaPEDO-1_fam-NCBI
cstrittmatter@0	1890 HMM Modified: NF000520.2 blaOXA-286_like updated to NF000520.2 blaOXA-2_like-NCBI
cstrittmatter@0	1891 HMM Modified: NF000531.2 blaTEM updated to NF000531.2 blaTHIN-NCBI
cstrittmatter@0	1892 HMM Modified: NF000538.0 classA_carba updated to NF000538.0 classA_firm-NCBI
cstrittmatter@0	1893 HMM Modified: NF007456.1 PRK10026.1 updated to NF007456.1 PRK13747.1-PRKfam
cstrittmatter@0	1894 HMM Modified: NF010310.2 PRK13747.1 updated to NF010310.2 PRK13752.1-PRKfam
cstrittmatter@0	1895 HMM Modified: NF010315.0 PRK13752.1 updated to NF010315.0 PSE-NCBI
cstrittmatter@0	1896 HMM Modified: NF012098.1 blaBPU updated to NF012098.1 blaCAM-NCBI
cstrittmatter@0	1897 HMM Modified: NF012099.1 SubclassA2 updated to NF012099.1 Sul1-NCBI
cstrittmatter@0	1898 HMM Modified: NF012100.0 blaVIM updated to NF012100.0 blaZ-NCBI
cstrittmatter@0	1899 HMM Modified: NF012101.1 blaGOB updated to NF012101.1 blaIMI-NCBI
cstrittmatter@0	1900 HMM Modified: NF012102.1 blaDHA updated to NF012102.1 blaDIM-NCBI
cstrittmatter@0	1901 HMM Modified: NF012103.0 blaGES updated to NF012103.0 blaGIL-NCBI
cstrittmatter@0	1902 HMM Modified: NF012137.0 bla_xUS updated to NF012137.0 ble_BLMA_gen-NCBI
cstrittmatter@0	1903 HMM Modified: NF012140.0 blaBJP updated to NF012140.0 blaBKC-NCBI
cstrittmatter@0	1904 HMM Modified: NF012141.0 blaKPC updated to NF012141.0 blaL-NCBI
cstrittmatter@0	1905 HMM Modified: NF012142.0 blaSME updated to NF012142.0 blaSPG-1_fam-NCBI
cstrittmatter@0	1906 HMM Modified: NF012143.0 SHV_LEN_OKP updated to NF012143.0 SMB1_fam-NCBI
cstrittmatter@0	1907 HMM Modified: NF012145.1 blaDIM_SIM_IMP updated to NF012145.1 blaEBR-NCBI
cstrittmatter@0	1908 HMM Modified: NF012146.1 blaB-IND-MUS updated to NF012146.1 blaB-NCBI
cstrittmatter@0	1909 HMM Modified: NF012147.1 blaIMP updated to NF012147.1 blaIND-NCBI
cstrittmatter@0	1910 HMM Modified: NF012148.0 blaKHM-HMB updated to NF012148.0 blaKLUC-NCBI
cstrittmatter@0	1911 HMM Modified: NF012149.0 blaIND updated to NF012149.0 blaKHM-HMB-NCBI
cstrittmatter@0	1912 HMM Modified: NF012150.3 blaSPM updated to NF012150.3 blaSRT-NCBI
cstrittmatter@0	1913 HMM Modified: NF012151.0 penta_rpt_QnrAS updated to NF012151.0 penta_rpt_QnrB-NCBI
cstrittmatter@0	1914 HMM Modified: NF012152.0 penta_rpt_QnrC updated to NF012152.0 penta_rpt_QnrD-NCBI
cstrittmatter@0	1915 HMM Modified: NF012153.1 tet_protect updated to NF012153.1 tet_protect_M-NCBI
cstrittmatter@0	1916 HMM Modified: NF012154.0 tet_protect_Q updated to NF012154.0 tet_prtrans_34-NCBI
cstrittmatter@0	1917 HMM Modified: NF012155.1 tet_protect_M updated to NF012155.1 tet_protect_M_W-NCBI
cstrittmatter@0	1918 HMM Modified: NF012156.1 blaP updated to NF012156.1 blaPAC-NCBI
cstrittmatter@0	1919 HMM Modified: NF012157.0 ANT_3pp_I updated to NF012157.0 ANT_3pp_II-NCBI
cstrittmatter@0	1920 HMM Modified: NF012158.1 macrolide_MphE updated to NF012158.1 macrolide_MphF-NCBI
cstrittmatter@0	1921 HMM Modified: NF012159.0 polymyxin_MCR2 updated to NF012159.0 polymyxin_MCR3-NCBI
cstrittmatter@0	1922 HMM Modified: NF012160.0 APH_6_Steno updated to NF012160.0 APH_7pp_Ia-NCBI
cstrittmatter@0	1923 HMM Modified: NF012161.0 bla_class_D_main updated to NF012161.0 bla_subclass_B1-NCBI
cstrittmatter@0	1924 HMM Modified: NF012165.0 AAC_6p_set_A updated to NF012165.0 ABCF_CarA-NCBI
cstrittmatter@0	1925 HMM Modified: NF012167.0 classA_firm updated to NF012167.0 cmlA_floR-NCBI
cstrittmatter@0	1926 HMM Modified: NF012169.0 qepA updated to NF012169.0 rRNA_meth_EmtA-NCBI
cstrittmatter@0	1927 HMM Modified: NF012170.0 qac_SMR_J updated to NF012170.0 qepA-NCBI
cstrittmatter@0	1928 HMM Modified: NF012171.0 APH_6 updated to NF012171.0 APH_6_Ic-NCBI
cstrittmatter@0	1929 HMM Modified: NF012172.1 FOX-MOX updated to NF012172.1 FexA-NCBI
cstrittmatter@0	1930 HMM Modified: NF012173.1 CMY2-MIR-ACT-EC updated to NF012173.1 CMY2-NCBI
cstrittmatter@0	1931 HMM Modified: NF012174.0 tet_MFS_A_B_C_D updated to NF012174.0 tet_MFS_B-NCBI
cstrittmatter@0	1932 HMM Modified: NF012175.1 tet_MFS_L_K_45 updated to NF012175.1 tet_MFS_OtrB-NCBI
cstrittmatter@0	1933 HMM Modified: NF012176.0 tet_MFS_38 updated to NF012176.0 tet_MFS_40-NCBI
cstrittmatter@0	1934 HMM Modified: NF012177.1 tet_MFS_42 updated to NF012177.1 tet_MFS_43-NCBI
cstrittmatter@0	1935 HMM Modified: NF012178.0 tet_MFS_V updated to NF012178.0 tet_MFS_Y-NCBI
cstrittmatter@0	1936 HMM Modified: NF012180.1 tet_MFS_43 updated to NF012180.1 tet_MFS_45-NCBI
cstrittmatter@0	1937 HMM Modified: NF012183.0 tet_MFS_K updated to NF012183.0 tet_MFS_L-NCBI
cstrittmatter@0	1938 HMM Modified: NF012184.0 tet_MFS_45 updated to NF012184.0 tet_MFS_A-NCBI
cstrittmatter@0	1939 HMM Modified: NF012185.0 tet_MFS_L updated to NF012185.0 tet_MFS_L_K_45-NCBI
cstrittmatter@0	1940 HMM Modified: NF012186.0 tet_MFS_D updated to NF012186.0 tet_MFS_E-NCBI
cstrittmatter@0	1941 HMM Modified: NF012187.0 tet_MFS_E updated to NF012187.0 tet_MFS_G-NCBI
cstrittmatter@0	1942 HMM Modified: NF012188.1 tet_MFS_Y updated to NF012188.1 tet_NaH_anti_35-NCBI
cstrittmatter@0	1943 HMM Modified: NF012190.1 tet_MFS_B updated to NF012190.1 tet_MFS_C-NCBI
cstrittmatter@0	1944 HMM Modified: NF012191.0 tet_MFS_C updated to NF012191.0 tet_MFS_D-NCBI
cstrittmatter@0	1945 HMM Modified: NF012192.0 tet_MFS_G updated to NF012192.0 tet_MFS_H-NCBI
cstrittmatter@0	1946 HMM Modified: NF012193.0 tet_MFS_A updated to NF012193.0 tet_MFS_A_B_C_D-NCBI
cstrittmatter@0	1947 HMM Modified: NF012194.0 tet_MFS_J updated to NF012194.0 tet_MFS_K-NCBI
cstrittmatter@0	1948 HMM Modified: NF012195.0 tet_MFS_H updated to NF012195.0 tet_MFS_H_J-NCBI
cstrittmatter@0	1949 HMM Modified: NF012199.0 cml_V_MFS updated to NF012199.0 cmx_cmrA-NCBI
cstrittmatter@0	1950 HMM Modified: NF012202.0 ble_MBL updated to NF012202.0 ble_Sh-NCBI
cstrittmatter@0	1951 HMM Modified: NF012203.0 cmlB1_MFS updated to NF012203.0 cml_V_MFS-NCBI
cstrittmatter@0	1952 HMM Modified: NF012207.0 tet_MFS_H_J updated to NF012207.0 tet_MFS_J-NCBI
cstrittmatter@0	1953 HMM Modified: NF012212.0 ANT_9 updated to NF012212.0 APH_2pp_IIIa-NCBI
cstrittmatter@0	1954 HMM Modified: NF012213.0 VanC1_ser_lig updated to NF012213.0 VarG_fam_MBL-NCBI
cstrittmatter@0	1955 HMM Modified: NF012214.1 D_ala_D_ser_VanC updated to NF012214.1 D_ala_D_ser_VanE-NCBI
cstrittmatter@0	1956 HMM Modified: NF012215.1 D_ala_D_lac_VanD updated to NF012215.1 D_ala_D_lac_VanF-NCBI
cstrittmatter@0	1957 HMM Modified: NF012216.1 D_ala_D_lac_VanB updated to NF012216.1 D_ala_D_lac_VanD-NCBI
cstrittmatter@0	1958 HMM Modified: NF012217.1 D_ala_D_lac_VanA updated to NF012217.1 D_ala_D_lac_VanB-NCBI
cstrittmatter@0	1959 HMM Modified: NF012218.0 erm_38_23S_MT updated to NF012218.0 erm_A_23S_MT-NCBI
cstrittmatter@0	1960 HMM Modified: NF012219.1 erm_C_23S_MT updated to NF012219.1 erm_F_23S_MT-NCBI
cstrittmatter@0	1961 HMM Modified: NF012220.1 erm_B_23S_MT updated to NF012220.1 erm_C_23S_MT-NCBI
cstrittmatter@0	1962 HMM Modified: NF012222.1 erm_A_23S_MT updated to NF012222.1 erm_B_23S_MT-NCBI
cstrittmatter@0	1963 HMM Modified: NF012223.0 erm_F_23S_MT updated to NF012223.0 erm_SHROVE-NCBI
cstrittmatter@0	1964 HMM Modified: NF012224.1 blaSFH updated to NF012224.1 blaSFH_gen-NCBI
cstrittmatter@0	1965 HMM Modified: NF012225.0 blaSFH_gen updated to NF012225.0 blaSGM-NCBI
cstrittmatter@0	1966 HMM Modified: NF012229.1 bla_class_B_core updated to NF012229.1 bla_class_C-NCBI
cstrittmatter@0	1967 HMM Modified: NF028535.0 ANT_4p_II updated to NF028535.0 ANT_4p_Ia-NCBI
cstrittmatter@0	1968 HMM Modified: NF032892.0 fosA7 updated to NF032892.0 fosA8-NCBI
cstrittmatter@0	1969 HMM Modified: NF032894.1 APH_3pp_Ia updated to NF032894.1 APH_3pp_Ib-NCBI
cstrittmatter@0	1970 HMM Modified: NF032895.1 APH_3pp_Ib updated to NF032895.1 APH_4_Ia-NCBI
cstrittmatter@0	1971 HMM Modified: NF032896.1 APH_3pp updated to NF032896.1 APH_3pp_Ia-NCBI
cstrittmatter@0	1972 HMM Modified: NF032897.1 APH_3p_V updated to NF032897.1 APH_3p_VI-NCBI
cstrittmatter@0	1973 HMM Modified: NF032898.1 APH_3p_II updated to NF032898.1 APH_3p_IIIa-NCBI
cstrittmatter@0	1974 HMM Modified: NF033059.2 APH_3p_I updated to NF033059.2 APH_3p_II-NCBI
cstrittmatter@0	1975 HMM Modified: NF033060.0 blaBCL updated to NF033060.0 blaBEL-NCBI
cstrittmatter@0	1976 HMM Modified: NF033061.1 ANT_4p_I updated to NF033061.1 ANT_4p_II-NCBI
cstrittmatter@0	1977 HMM Modified: NF033062.0 APH_3p_VI updated to NF033062.0 APH_3p_VIII-NCBI
cstrittmatter@0	1978 HMM Modified: NF033063.0 APH_3p_XV updated to NF033063.0 APH_3pp-NCBI
cstrittmatter@0	1979 HMM Modified: NF033064.0 APH_3p_IIIa updated to NF033064.0 APH_3p_IVa-NCBI
cstrittmatter@0	1980 HMM Modified: NF033065.0 APH_3p_IVa updated to NF033065.0 APH_3p_V-NCBI
cstrittmatter@0	1981 HMM Modified: NF033066.0 APH_3p_VIII updated to NF033066.0 APH_3p_VIIa-NCBI
cstrittmatter@0	1982 HMM Modified: NF033067.1 APH_3p_VIIa updated to NF033067.1 APH_3p_XV-NCBI
cstrittmatter@0	1983 HMM Modified: NF033068.1 APH_3p updated to NF033068.1 APH_3p_A16-NCBI
cstrittmatter@0	1984 HMM Modified: NF033074.0 AAC_6p_Ib updated to NF033074.0 AAC_6p_Id-NCBI
cstrittmatter@0	1985 HMM Modified: NF033075.0 AAC_6p_Steno updated to NF033075.0 AAC_6p_Strep-NCBI
cstrittmatter@0	1986 HMM Modified: NF033076.0 AAC_6p_Yersi updated to NF033076.0 AAC_6p_set_A-NCBI
cstrittmatter@0	1987 HMM Modified: NF033077.0 AAC_6p_A30 updated to NF033077.0 AAC_6p_A31-NCBI
cstrittmatter@0	1988 HMM Modified: NF033078.2 AAC_6p_Ia_fam updated to NF033078.2 AAC_6p_Iad-NCBI
cstrittmatter@0	1989 HMM Modified: NF033080.0 AAC_3_II updated to NF033080.0 AAC_3_IV-NCBI
cstrittmatter@0	1990 HMM Modified: NF033081.0 AAC_3_IV updated to NF033081.0 AAC_3_VIII-NCBI
cstrittmatter@0	1991 HMM Modified: NF033082.0 AAC_3 updated to NF033082.0 AAC_3_I-NCBI
cstrittmatter@0	1992 HMM Modified: NF033083.0 AAC_3_I updated to NF033083.0 AAC_3_II-NCBI
cstrittmatter@0	1993 HMM Modified: NF033084.2 ANT_6 updated to NF033084.2 ANT_6_aadK-NCBI
cstrittmatter@0	1994 HMM Modified: NF033085.1 bla_class_C updated to NF033085.1 bla_class_D_alt-NCBI
cstrittmatter@0	1995 HMM Modified: NF033087.1 bla_subclass_B2 updated to NF033087.1 bla_subclass_B3-NCBI
cstrittmatter@0	1996 HMM Modified: NF033088.1 bla_subclass_B1 updated to NF033088.1 bla_subclass_B2-NCBI
cstrittmatter@0	1997 HMM Modified: NF033089.1 blaCTX-M updated to NF033089.1 blaCcrA-NCBI
cstrittmatter@0	1998 HMM Modified: NF033090.1 HK_VanS_B updated to NF033090.1 HK_VanS_O-NCBI
cstrittmatter@0	1999 HMM Modified: NF033091.0 HK_VanS_ACDEFG updated to NF033091.0 HK_VanS_B-NCBI
cstrittmatter@0	2000 HMM Modified: NF033094.0 HK_VanS_O updated to NF033094.0 L2-NCBI
cstrittmatter@0	2001 HMM Modified: NF033095.1 bla_Bc_2 updated to NF033095.1 bla_CblA-NCBI
cstrittmatter@0	2002 HMM Modified: NF033096.1 bla1 updated to NF033096.1 blaACC-NCBI
cstrittmatter@0	2003 HMM Modified: NF033098.1 bla_CblA updated to NF033098.1 bla_CepA-NCBI
cstrittmatter@0	2004 HMM Modified: NF033099.1 bla_Exo updated to NF033099.1 bla_class_A-NCBI
cstrittmatter@0	2005 HMM Modified: NF033100.1 bla_CfxA updated to NF033100.1 bla_Exo-NCBI
cstrittmatter@0	2006 HMM Modified: NF033101.0 blaL updated to NF033101.0 blaL1-NCBI
cstrittmatter@0	2007 HMM Modified: NF033102.1 bla_CepA updated to NF033102.1 bla_CfxA-NCBI
cstrittmatter@0	2008 HMM Modified: NF033103.1 bla_class_A updated to NF033103.1 bla_class_B_core-NCBI
cstrittmatter@0	2009 HMM Modified: NF033104.0 blaOXA-46_like updated to NF033104.0 blaOXA-48_like-NCBI
cstrittmatter@0	2010 HMM Modified: NF033105.1 bla_subclass_B3 updated to NF033105.1 bla_xUS-NCBI
cstrittmatter@0	2011 HMM Modified: NF033106.1 blaL1 updated to NF033106.1 blaLAP-NCBI
cstrittmatter@0	2012 HMM Modified: NF033107.1 blaB updated to NF033107.1 blaBBI-NCBI
cstrittmatter@0	2013 HMM Modified: NF033108.1 sensor_BlaR1 updated to NF033108.1 sensor_MecR1-NCBI
cstrittmatter@0	2014 HMM Modified: NF033109.1 sensor_MecR1 updated to NF033109.1 stat-NCBI
cstrittmatter@0	2015 HMM Modified: NF033111.2 tet_monoox_X updated to NF033111.2 tet_protect-NCBI
cstrittmatter@0	2016 HMM Modified: NF033112.0 APH_3p_A16 updated to NF033112.0 APH_3p_I-NCBI
cstrittmatter@0	2017 HMM Modified: NF033114.1 phos_trans_CPT updated to NF033114.1 poly_MCR3_broad-NCBI
cstrittmatter@0	2018 HMM Modified: NF033115.1 dipept_VanX updated to NF033115.1 efflux_CmlA-NCBI
cstrittmatter@0	2019 HMM Modified: NF033117.2 vanR_ACDEGLN updated to NF033117.2 vanR_FM-NCBI
cstrittmatter@0	2020 HMM Modified: NF033118.1 vanR-O updated to NF033118.1 vanR_ACDEGLN-NCBI
cstrittmatter@0	2021 HMM Modified: NF033120.0 vanR_FM updated to NF033120.0 vanT-CELN-NCBI
cstrittmatter@0	2022 HMM Modified: NF033122.1 vanW-B updated to NF033122.1 vanW-G-NCBI
cstrittmatter@0	2023 HMM Modified: NF033123.1 vanW-G updated to NF033123.1 vanW-gen-NCBI
cstrittmatter@0	2024 HMM Modified: NF033125.2 vanZ-A updated to NF033125.2 vanZ-F-NCBI
cstrittmatter@0	2025 HMM Modified: NF033126.1 ANT_3pp_AadA1 updated to NF033126.1 ANT_3pp_AadA3-NCBI
cstrittmatter@0	2026 HMM Modified: NF033127.1 ANT_3pp_AadA3 updated to NF033127.1 ANT_3pp_I-NCBI
cstrittmatter@0	2027 HMM Modified: NF033128.2 vanW-gen updated to NF033128.2 vanXY-NCBI
cstrittmatter@0	2028 HMM Modified: NF033129.1 macro_glyco_Mgt updated to NF033129.1 macrolide_MefA-NCBI
cstrittmatter@0	2029 HMM Modified: NF033130.1 AAC_6p_A48 updated to NF033130.1 AAC_6p_A49-NCBI
cstrittmatter@0	2030 HMM Modified: NF033131.1 vanT-G-Cterm updated to NF033131.1 vanT-L-cat-NCBI
cstrittmatter@0	2031 HMM Modified: NF033132.1 vanT-CELN updated to NF033132.1 vanT-G-Cterm-NCBI
cstrittmatter@0	2032 HMM Modified: NF033133.1 vanT-L-cat updated to NF033133.1 vanT-L-mem-NCBI
cstrittmatter@0	2033 HMM Modified: NF033135.1 cmx_cmrA updated to NF033135.1 coreg_MerD-NCBI
cstrittmatter@0	2034 HMM Modified: NF033136.1 SMR_qac_K updated to NF033136.1 SMR_qac_bcrB-NCBI
cstrittmatter@0	2035 HMM Modified: NF033137.0 SMR_qac_int updated to NF033137.0 SMR_qac_pB8-NCBI
cstrittmatter@0	2036 HMM Modified: NF033139.1 blaZ updated to NF033139.1 blaZ_gen-NCBI
cstrittmatter@0	2037 HMM Modified: NF033140.0 blaZ_mecC_type updated to NF033140.0 bla_B2_CphA-NCBI
cstrittmatter@0	2038 HMM Modified: NF033141.0 blaZ_gen updated to NF033141.0 blaZ_mecC_type-NCBI
cstrittmatter@0	2039 HMM Modified: NF033142.1 efflux_OM_AdeC updated to NF033142.1 emrE-Resfams
cstrittmatter@0	2040 HMM Modified: NF033144.1 rifampin_ARR updated to NF033144.1 rifampin_ARR_Ms-NCBI
cstrittmatter@0	2041 HMM Modified: NF033145.1 rif_monoox updated to NF033145.1 rifampin_ARR-NCBI
cstrittmatter@0	2042 HMM Modified: NF033148.1 tet_protect_M_W updated to NF033148.1 tet_protect_Q-NCBI
cstrittmatter@0	2043 HMM Modified: NF033149.0 CHL_hydrolase updated to NF033149.0 CMY2-MIR-ACT-EC-NCBI
cstrittmatter@0	2044 HMM Modified: NF033150.1 AAC_6p_A49 updated to NF033150.1 AAC_6p_Acine-NCBI
cstrittmatter@0	2045 HMM Modified: NF033151.0 AAC_6p_A10 updated to NF033151.0 AAC_6p_A29-NCBI
cstrittmatter@0	2046 HMM Modified: NF033152.0 BlaA_Yent updated to NF033152.0 BlaEC-NCBI
cstrittmatter@0	2047 HMM Modified: NF033156.1 ble_BLMA_gen updated to NF033156.1 ble_BLMT-NCBI
cstrittmatter@0	2048 HMM Modified: NF033159.0 blaPAC updated to NF033159.0 blaPAU-NCBI
cstrittmatter@0	2049 HMM Modified: NF033174.0 blaPSV updated to NF033174.0 blaR1_generic-NCBI
cstrittmatter@0	2050 HMM Modified: NF033180.1 AAC_3_VIII updated to NF033180.1 AAC_3_VIa-NCBI
cstrittmatter@0	2051 HMM Modified: NF033182.0 linco_LnuG updated to NF033182.0 linco_LnuP-NCBI
cstrittmatter@0	2052 HMM Modified: NF033204.1 blaRUB updated to NF033204.1 blaSCO-NCBI
cstrittmatter@0	2053 HMM Modified: NF033209.1 16S_rRNA_Rmt_B updated to NF033209.1 16S_rRNA_Rmt_C-NCBI
cstrittmatter@0	2054 HMM Modified: NF033211.1 blaCRH updated to NF033211.1 blaCSA-NCBI
cstrittmatter@0	2055 HMM Modified: NF033220.1 ANT_3pp_II updated to NF033220.1 ANT_4p_I-NCBI
cstrittmatter@0	2056 HMM Modified: NF033221.1 aadE-Cc updated to NF033221.1 acid_shock_Asr-NCBI
cstrittmatter@0	2057 HMM Modified: NF033374.6 AAC_6p_Id updated to NF033374.6 AAC_6p_Ie-NCBI
cstrittmatter@0	2058 HMM Modified: NF033375.2 penta_rpt_QnrE updated to NF033375.2 penta_rpt_QnrS-NCBI
cstrittmatter@0	2059 HMM Modified: NF033378.1 MECD_PBP updated to NF033378.1 MFS_efflux_PexA-NCBI
cstrittmatter@0	2060 HMM Modified: NF033386.1 blaARL updated to NF033386.1 blaAXC-NCBI
cstrittmatter@0	2061 HMM Modified: NF033387.1 ANT_6_aadS updated to NF033387.1 ANT_6_str-NCBI
cstrittmatter@0	2062 HMM Modified: NF033398.1 rRNA_meth_EmtA updated to NF033398.1 ribo_prot_ABC_F-NCBI
cstrittmatter@0	2063 HMM Modified: NF033405.1 FosL updated to NF033405.1 FosX-NCBI
cstrittmatter@0	2064 HMM Modified: NF033406.1 blaMCA updated to NF033406.1 blaMSI-1_fam-NCBI
cstrittmatter@0	2065 HMM Modified: NF033408.5 polymyxin_MCR3 updated to NF033408.5 polymyxin_MCR4-NCBI
cstrittmatter@0	2066 HMM Modified: NF033409.0 poly_MCR3_broad updated to NF033409.0 polymyxin_MCR1-NCBI
cstrittmatter@0	2067 HMM Modified: NF033462.1 polymyxin_MCR4 updated to NF033462.1 polymyxin_MCR5-NCBI
cstrittmatter@0	2068 HMM Modified: NF033463.1 polymyxin_MCR5 updated to NF033463.1 polymyxin_MCR6-NCBI
cstrittmatter@0	2069 HMM Modified: NF033466.0 blaRCP updated to NF033466.0 blaRHO-NCBI
cstrittmatter@0	2070 HMM Modified: NF033467.0 blaAQU updated to NF033467.0 blaARL-NCBI
cstrittmatter@0	2071 HMM Modified: NF033468.1 stregram_VatI updated to NF033468.1 tet_ABC_46_A-NCBI
cstrittmatter@0	2072 HMM Modified: NF033469.1 SMR_qac_bcrB updated to NF033469.1 SMR_qac_bcrC-NCBI
cstrittmatter@0	2073 HMM Modified: NF033470.1 SMR_qac_bcrC updated to NF033470.1 SMR_qac_int-NCBI
cstrittmatter@0	2074 HMM Modified: NF033472.1 AAC_2p_IIb updated to NF033472.1 AAC_2p_Ia-NCBI
cstrittmatter@0	2075 HMM Modified: NF033473.1 trim_DfrE updated to NF033473.1 trim_DfrF-NCBI
cstrittmatter@0	2076 HMM Modified: NF033476.1 tet_destruct updated to NF033476.1 tet_monoox_X-NCBI
cstrittmatter@0	2077 HMM Modified: NF033502.0 Sul4 updated to NF033502.0 TlmB-NCBI
cstrittmatter@0	2078 HMM Modified: NF033509.1 blaOXA-22_like updated to NF033509.1 blaOXA-23_like-NCBI
cstrittmatter@0	2079 HMM Modified: NF033555.1 lyase_MerB updated to NF033555.1 macro_glyco_Mgt-NCBI
cstrittmatter@0	2080 HMM Modified: NF033560.1 merT_RC607 updated to NF033560.1 myrA-NCBI
cstrittmatter@0	2081 HMM Modified: NF033565.0 trans_MerF updated to NF033565.0 trans_reg_VanU-NCBI
cstrittmatter@0	2082 HMM Modified: NF033568.1 blaROB updated to NF033568.1 blaRUB-NCBI
cstrittmatter@0	2083 HMM Modified: NF033569.1 blaLHK updated to NF033569.1 blaLUT-NCBI
cstrittmatter@0	2084 HMM Modified: NF033574.1 VarG_fam_MBL updated to NF033574.1 Vat_ABCDEFH-NCBI
cstrittmatter@0	2085 HMM Modified: NF033575.1 blaRHO updated to NF033575.1 blaROB-NCBI
cstrittmatter@0	2086 HMM Modified: NF033582.2 blaALI updated to NF033582.2 blaAQU-NCBI
cstrittmatter@0	2087 HMM Modified: NF033584.1 blaPST updated to NF033584.1 blaPSV-NCBI
cstrittmatter@0	2088 HMM Modified: NF033585.1 blaTTU updated to NF033585.1 blaTUS-NCBI
cstrittmatter@0	2089 HMM Modified: NF033612.0 AAC_3_VIa updated to NF033612.0 AAC_3_XI-NCBI
cstrittmatter@0	2090 HMM Modified: NF033613.1 blaOXA-576_like updated to NF033613.1 blaOXA-58_like-NCBI
cstrittmatter@0	2091 HMM Modified: NF033614.1 APH_6_Ic_gen updated to NF033614.1 APH_6_Steno-NCBI
cstrittmatter@0	2092 HMM Modified: NF033626.1 blaBKC_GPC updated to NF033626.1 blaBPU-NCBI
cstrittmatter@0	2093 HMM Modified: NF033627.3 intimin_all updated to NF033627.3 intimin_alpha-NCBI
cstrittmatter@0	2094 HMM Modified: NF033636.1 acid_shock_Asr updated to NF033636.1 adeC-adeK-oprM-Resfams
cstrittmatter@0	2095 HMM Modified: NF033637.1 transloc_TIR updated to NF033637.1 transport_merC-NCBI
cstrittmatter@0	2096 HMM Modified: NF033639.1 intimin_alpha updated to NF033639.1 linco_LnuA-NCBI
cstrittmatter@0	2097 HMM Modified: NF033646.1 toxin_EAST1 updated to NF033646.1 trans_MerF-NCBI
cstrittmatter@0	2098 HMM Modified: NF033648.1 blaOXA-274_like updated to NF033648.1 blaOXA-286_like-NCBI
cstrittmatter@0	2099 HMM Modified: NF033658.1 Shiga_Stx1A updated to NF033658.1 Shiga_Stx1B-NCBI
cstrittmatter@0	2100 HMM Modified: NF033659.0 Shiga_Stx1B updated to NF033659.0 Shiga_Stx2A-NCBI
cstrittmatter@0	2101 HMM Modified: NF033660.0 Shiga_Stx2B updated to NF033660.0 SubclassA2-NCBI
cstrittmatter@0	2102 HMM Modified: NF033661.1 Shiga_Stx2A updated to NF033661.1 Shiga_Stx2B-NCBI
cstrittmatter@0	2103 HMM Modified: NF033666.1 blaOXA-727_like updated to NF033666.1 blaOXA-85_like-NCBI
cstrittmatter@0	2104 HMM Modified: NF033667.1 blaOXA-55_like updated to NF033667.1 blaOXA-576_like-NCBI
cstrittmatter@0	2105 HMM Modified: NF033669.1 polymyxin_MCR8 updated to NF033669.1 polymyxin_MCR9-NCBI
cstrittmatter@0	2106 HMM Modified: NF033670.1 polymyxin_MCR6 updated to NF033670.1 polymyxin_MCR7-NCBI
cstrittmatter@0	2107 HMM Modified: NF033671.1 polymyxin_MCR7 updated to NF033671.1 polymyxin_MCR8-NCBI
cstrittmatter@0	2108 HMM Modified: NF033692.1 APH_2pp_I_a_f_h updated to NF033692.1 APH_2pp_Ia-NCBI
cstrittmatter@0	2109 HMM Modified: NF033693.0 AAC_6p_Ie_fam updated to NF033693.0 AAC_6p_If-NCBI
cstrittmatter@0	2110 HMM Modified: NF033698.1 blaCSA updated to NF033698.1 blaCTX-M-NCBI
cstrittmatter@0	2111 HMM Modified: NF033700.1 blaCMA updated to NF033700.1 blaCME-NCBI
cstrittmatter@0	2112 HMM Modified: NF033702.0 blaOXA-12_like updated to NF033702.0 blaOXA-134_like-NCBI
cstrittmatter@0	2113 HMM Modified: NF033714.1 blaBBI updated to NF033714.1 blaBCL-NCBI
cstrittmatter@0	2114 HMM Modified: NF033727.1 chaperon_ArsD updated to NF033727.1 chloram_CatA-NCBI
cstrittmatter@0	2115 HMM Modified: NF033736.1 blaAFM updated to NF033736.1 blaAIM-NCBI
cstrittmatter@0	2116 HMM Modified: NF033781.1 chaper_CopP updated to NF033781.1 chaperon_ArsD-NCBI
cstrittmatter@0	2117 HMM Modified: NF033783.1 coreg_MerD updated to NF033783.1 cyto_nec_fctrs-NCBI
cstrittmatter@0	2118 HMM Modified: NF033784.1 transport_merC updated to NF033784.1 trim_DfrA10-NCBI
cstrittmatter@0	2119 HMM Modified: NF033786.1 phenyl_MerG updated to NF033786.1 phos_trans_CPT-NCBI
cstrittmatter@0	2120 HMM Modified: NF033815.0 blaOXA-364_like updated to NF033815.0 blaOXA-372_like-NCBI
cstrittmatter@0	2121 HMM Modified: NF033818.0 blaOXA-114_like updated to NF033818.0 blaOXA-12_like-NCBI
cstrittmatter@0	2122 HMM Modified: NF033834.1 RND_adapt_MexA updated to NF033834.1 RND_perm_OqxB-NCBI
cstrittmatter@0	2123 HMM Modified: NF033836.1 polymyxin_MCR9 updated to NF033836.1 qac_MFS_AB-NCBI
cstrittmatter@0	2124 HMM Modified: NF033851.1 trim_DfrA35 updated to NF033851.1 trim_DfrA36-NCBI
cstrittmatter@0	2125 HMM Modified: NF033866.1 blaCDD updated to NF033866.1 blaCIA-NCBI
cstrittmatter@0	2126 HMM Modified: NF033867.1 blaPAU updated to NF033867.1 blaPDC-NCBI
cstrittmatter@0	2127 HMM Modified: NF033868.0 trim_DfrA36 updated to NF033868.0 trim_DfrA3b-NCBI
cstrittmatter@0	2128 HMM Modified: NF033877.0 arsB_Sta_pI258 updated to NF033877.0 betalact_A_Burk_PenA-NCBI
cstrittmatter@0	2129 HMM Modified: NF033895.1 blaCAM updated to NF033895.1 blaCAU-NCBI
cstrittmatter@0	2130 HMM Modified: NF033929.1 blaAXC updated to NF033929.1 blaB-IND-MUS-NCBI
cstrittmatter@0	2131 HMM Modified: NF033933.0 fosA8 updated to NF033933.0 fusB-NCBI
cstrittmatter@0	2132 HMM Modified: TIGR02052.1 TIGR02052 updated to TIGR02052.1 MexE-Resfams
cstrittmatter@0	2133 HMM Modified: TIGR02053.1 TIGR02053 updated to TIGR02053.1 MerP-TIGRFAMs
cstrittmatter@0	2134 - Protein family changes:
cstrittmatter@0	2135 Total: Added 28
cstrittmatter@0	2136 Total: Prev. Release 1499
cstrittmatter@0	2137 Total: Removed 0
cstrittmatter@0	2138 Total: This Release 1527
cstrittmatter@0	2139 Family Added: hmm_id #fam_id
cstrittmatter@0	2140 Family Added: - afaC
cstrittmatter@0	2141 Family Added: - bin_CdtA
cstrittmatter@0	2142 Family Added: - bin_CdtB
cstrittmatter@0	2143 Family Added: - bmaE
cstrittmatter@0	2144 Family Added: - cvaC
cstrittmatter@0	2145 Family Added: - emrD
cstrittmatter@0	2146 Family Added: - focG
cstrittmatter@0	2147 Family Added: - ibeA
cstrittmatter@0	2148 Family Added: - iutA
cstrittmatter@0	2149 Family Added: - mcr-10
cstrittmatter@0	2150 Family Added: - papA
cstrittmatter@0	2151 Family Added: - papC
cstrittmatter@0	2152 Family Added: - papE
cstrittmatter@0	2153 Family Added: - papG
cstrittmatter@0	2154 Family Added: - papG-I
cstrittmatter@0	2155 Family Added: - papG-II
cstrittmatter@0	2156 Family Added: - papG-III
cstrittmatter@0	2157 Family Added: - papH
cstrittmatter@0	2158 Family Added: - sfaF
cstrittmatter@0	2159 Family Added: - tcdA
cstrittmatter@0	2160 Family Added: - tcdB
cstrittmatter@0	2161 Family Added: - tcdC
cstrittmatter@0	2162 Family Added: - tcdE
cstrittmatter@0	2163 Family Added: - tcdR
cstrittmatter@0	2164 Family Added: - tcd_gen
cstrittmatter@0	2165 Family Added: - tva(A)
cstrittmatter@0	2166 Family Added: - tva(B)
cstrittmatter@0	2167 Family Changed: - blaOXA-266_fam updated to NF033653.1 blaOXA-266_fam
cstrittmatter@0	2168
cstrittmatter@0	2169 ---------------------------------------------------------------------
cstrittmatter@0	2170 Changes included in 2019-09-06.1
cstrittmatter@0	2171 ---------------------------------------------------------------------
cstrittmatter@0	2172
cstrittmatter@0	2173 This release just removes two accidentally included "plus" proteins. We
cstrittmatter@0	2174 suggest you switch to AMRFinderPlus. See https://github.com/ncbi/amr/wiki for
cstrittmatter@0	2175 information an how to install since we will be dropping support for this
cstrittmatter@0	2176 version of AMRFinder soon.
cstrittmatter@0	2177
cstrittmatter@0	2178 - Protein changes:
cstrittmatter@0	2179 Total: Added 0
cstrittmatter@0	2180 Total: Prev. Release 5984
cstrittmatter@0	2181 Total: Removed 2
cstrittmatter@0	2182 Total: This Release 5982
cstrittmatter@0	2183 Protein Removed: AAB91079.1 bind_CopB copper-binding_protein_CopB
cstrittmatter@0	2184 Protein Removed: BAB62907.1 cofA type_IV_pilus_CFA/III_major_pilin
cstrittmatter@0	2185
cstrittmatter@0	2186 ---------------------------------------------------------------------
cstrittmatter@0	2187 Changes included in 2019-09-6.1
cstrittmatter@0	2188 ---------------------------------------------------------------------
cstrittmatter@0	2189
cstrittmatter@0	2190 This release removes three erroniously included proteins that were provided by
cstrittmatter@0	2191 collaborators, but accidentally released before review by curators. these
cstrittmatter@0	2192 sequences do not match the family, gene symbol, or protein name of the
cstrittmatter@0	2193 virulence and stress response families to which they had been added. There are
cstrittmatter@0	2194 no other changes.
cstrittmatter@0	2195
cstrittmatter@0	2196 We will add controls to the database publication system to programmatically
cstrittmatter@0	2197 require that curators have manually reviewed all protein sequences before they
cstrittmatter@0	2198 become public.
cstrittmatter@0	2199
cstrittmatter@0	2200 - Reference Gene Catalog protein and allele changes:
cstrittmatter@0	2201 Total in prev: 6274
cstrittmatter@0	2202 Total in release: 6271
cstrittmatter@0	2203 Removed: 3
cstrittmatter@0	2204 Added: 0
cstrittmatter@0	2205 Changed: 0
cstrittmatter@0	2206 Removed copB AAB91079.1
cstrittmatter@0	2207 Removed aaiC AHW84565.1
cstrittmatter@0	2208 Removed cofA BAB62907.1
cstrittmatter@0	2209
cstrittmatter@0	2210 ---------------------------------------------------------------------
cstrittmatter@0	2211 Changes included in 2019-08-27.1
cstrittmatter@0	2212 ---------------------------------------------------------------------
cstrittmatter@0	2213
cstrittmatter@0	2214 This release includes a new database file to correspond with AMRFinderPlus
cstrittmatter@0	2215 version 3.1 that includes information for blacklisting of a few "plus" proteins
cstrittmatter@0	2216 common in some organisms that are interesting when found in others. This
cstrittmatter@0	2217 release also includes the usual new AMR genes and alleles; the fixing of some
cstrittmatter@0	2218 typos; removal of a redundant point mutation reference sequence; and the
cstrittmatter@0	2219 addition, reoorganization, and renaming of some "plus" genes.
cstrittmatter@0	2220
cstrittmatter@0	2221 - Reference Gene Catalog protein and allele changes:
cstrittmatter@0	2222
cstrittmatter@0	2223 Total in prev: 6110
cstrittmatter@0	2224 Total in release: 6274
cstrittmatter@0	2225 Removed: 18
cstrittmatter@0	2226 Added: 182
cstrittmatter@0	2227 Changed: 33
cstrittmatter@0	2228 Removed emrD3 WP_000850833.1
cstrittmatter@0	2229 Removed blaOXA-671 WP_016660101.1
cstrittmatter@0	2230 Removed arsB-mob WP_063116263.1
cstrittmatter@0	2231 Removed gyrA_A67S WP_001281242.1
cstrittmatter@0	2232 Removed gyrA_A84P WP_001281242.1
cstrittmatter@0	2233 Removed gyrA_D87G WP_001281242.1
cstrittmatter@0	2234 Removed gyrA_D87H WP_001281242.1
cstrittmatter@0	2235 Removed gyrA_D87N WP_001281242.1
cstrittmatter@0	2236 Removed gyrA_D87V WP_001281242.1
cstrittmatter@0	2237 Removed gyrA_D87Y WP_001281242.1
cstrittmatter@0	2238 Removed gyrA_G81C WP_001281242.1
cstrittmatter@0	2239 Removed gyrA_H80P WP_001281242.1
cstrittmatter@0	2240 Removed gyrA_N57K WP_001281242.1
cstrittmatter@0	2241 Removed gyrA_Q106H WP_001281242.1
cstrittmatter@0	2242 Removed gyrA_S83F WP_001281242.1
cstrittmatter@0	2243 Removed gyrA_S83I WP_001281242.1
cstrittmatter@0	2244 Removed gyrA_S83L WP_001281242.1
cstrittmatter@0	2245 Removed gyrA_S83W WP_001281242.1
cstrittmatter@0	2246 Added arsB AAA21095.1
cstrittmatter@0	2247 Added arsC AAA21096.1
cstrittmatter@0	2248 Added arsR AAA25636.1
cstrittmatter@0	2249 Added arsB AAA25637.1
cstrittmatter@0	2250 Added copC AAA25808.1
cstrittmatter@0	2251 Added arsR AAA27587.1
cstrittmatter@0	2252 Added arsB AAA27588.1
cstrittmatter@0	2253 Added arsR AAB09624.1
cstrittmatter@0	2254 Added arsC AAB09628.1
cstrittmatter@0	2255 Added arsC AAB42203.1
cstrittmatter@0	2256 Added arsB AAB42204.1
cstrittmatter@0	2257 Added ipaH9.8 AAC23714.1
cstrittmatter@0	2258 Added pic AAD23953.1
cstrittmatter@0	2259 Added efa1 AAD49229.2
cstrittmatter@0	2260 Added iha AAG55323.1
cstrittmatter@0	2261 Added stb AAK29747.1
cstrittmatter@0	2262 Added efa1 AAL57562.1
cstrittmatter@0	2263 Added pic AAN78833.1
cstrittmatter@0	2264 Added iha AAN82058.1
cstrittmatter@0	2265 Added cif AAQ07241.1
cstrittmatter@0	2266 Added iha AAT68782.1
cstrittmatter@0	2267 Added efa1 AAV91321.1
cstrittmatter@0	2268 Added sab AAZ76500.1
cstrittmatter@0	2269 Added senB AAZ89288.1
cstrittmatter@0	2270 Added iha ABB17254.1
cstrittmatter@0	2271 Added emrD3 ABQ18953.1
cstrittmatter@0	2272 Added kdeA ABR76310.1
cstrittmatter@0	2273 Added lmrC ABX00624.1
cstrittmatter@0	2274 Added iha ACB20136.1
cstrittmatter@0	2275 Added iha ACD08748.1
cstrittmatter@0	2276 Added amvA ACQ82816.1
cstrittmatter@0	2277 Added ipaH4 ADA74402.1
cstrittmatter@0	2278 Added iha ADI47068.1
cstrittmatter@0	2279 Added iha ADN47767.1
cstrittmatter@0	2280 Added arsR ADZ44504.1
cstrittmatter@0	2281 Added iha AEQ14190.1
cstrittmatter@0	2282 Added stb AET14866.1
cstrittmatter@0	2283 Added arsR AET17094.1
cstrittmatter@0	2284 Added pic AFS72825.1
cstrittmatter@0	2285 Added iha AFS75030.1
cstrittmatter@0	2286 Added asr BAA15331.2
cstrittmatter@0	2287 Added arsB BAA24823.1
cstrittmatter@0	2288 Added arsC BAA24824.1
cstrittmatter@0	2289 Added espK BAB34991.1
cstrittmatter@0	2290 Added fieF BAB89353.1
cstrittmatter@0	2291 Added fieF BAE77395.1
cstrittmatter@0	2292 Added arsR BAE77793.1
cstrittmatter@0	2293 Added cif BAG66370.1
cstrittmatter@0	2294 Added iha BAI27255.1
cstrittmatter@0	2295 Added efa1 BAI32294.1
cstrittmatter@0	2296 Added iha CAC39288.1
cstrittmatter@0	2297 Added efa1 CAC81883.1
cstrittmatter@0	2298 Added efa1 CAD30848.1
cstrittmatter@0	2299 Added stb CAD87835.1
cstrittmatter@0	2300 Added iha CAE55782.1
cstrittmatter@0	2301 Added efa1 CAI43818.1
cstrittmatter@0	2302 Added hlyA-alpha CAQ77251.1
cstrittmatter@0	2303 Added iha CAR09712.2
cstrittmatter@0	2304 Added pic CAU99295.1
cstrittmatter@0	2305 Added iha CBW53086.1
cstrittmatter@0	2306 Added ipaH5 EID63069.1
cstrittmatter@0	2307 Added fosB WP_000920239.1
cstrittmatter@0	2308 Added dfrA36 WP_000949574.1
cstrittmatter@0	2309 Added mphM WP_001041372.1
cstrittmatter@0	2310 Added cfr(B) WP_002405682.1
cstrittmatter@0	2311 Added mphK WP_003246254.1
cstrittmatter@0	2312 Added blaPDC-374 WP_003454242.1
cstrittmatter@0	2313 Added tet(56) WP_003635403.1
cstrittmatter@0	2314 Added blaCDD-1 WP_009901927.1
cstrittmatter@0	2315 Added mphH WP_015776248.1
cstrittmatter@0	2316 Added erm(49) WP_019728092.1
cstrittmatter@0	2317 Added blaCDD-2 WP_021361759.1
cstrittmatter@0	2318 Added mphN WP_024127776.1
cstrittmatter@0	2319 Added tet(X) WP_024160783.1
cstrittmatter@0	2320 Added blaPDC-361 WP_031638595.1
cstrittmatter@0	2321 Added tet(G) WP_032489471.1
cstrittmatter@0	2322 Added vga(E) WP_032495718.1
cstrittmatter@0	2323 Added blaACT-72 WP_045895620.1
cstrittmatter@0	2324 Added blaACT-70 WP_047364854.1
cstrittmatter@0	2325 Added blaACT-69 WP_048209719.1
cstrittmatter@0	2326 Added ble WP_063842967.1
cstrittmatter@0	2327 Added blaOXA-671 WP_081401608.1
cstrittmatter@0	2328 Added icr-Mo WP_082741435.1
cstrittmatter@0	2329 Added blaOXA-653 WP_087554513.1
cstrittmatter@0	2330 Added tet(X) WP_094309310.1
cstrittmatter@0	2331 Added blaMOX-13 WP_096807444.1
cstrittmatter@0	2332 Added blaFOX-15 WP_096807445.1
cstrittmatter@0	2333 Added blaCMY-157 WP_096807446.1
cstrittmatter@0	2334 Added blaIMP-69 WP_099156051.1
cstrittmatter@0	2335 Added blaPDC-249 WP_104009845.1
cstrittmatter@0	2336 Added blaACT-58 WP_111965422.1
cstrittmatter@0	2337 Added blaACT-62 WP_111967096.1
cstrittmatter@0	2338 Added blaACT-63 WP_112780466.1
cstrittmatter@0	2339 Added blaOXA-727 WP_114272532.1
cstrittmatter@0	2340 Added blaOXA-731 WP_116786833.1
cstrittmatter@0	2341 Added blaOXA-728 WP_116786835.1
cstrittmatter@0	2342 Added blaPDC-367 WP_121286063.1
cstrittmatter@0	2343 Added blaPDC-364 WP_121347819.1
cstrittmatter@0	2344 Added blaFLC-1 WP_123061077.1
cstrittmatter@0	2345 Added blaPDC-371 WP_126118969.1
cstrittmatter@0	2346 Added blaPDC-353 WP_128550481.1
cstrittmatter@0	2347 Added blaVIM-67 WP_142875125.1
cstrittmatter@0	2348 Added blaADC-196 WP_145850033.1
cstrittmatter@0	2349 Added blaAQU WP_148044401.1
cstrittmatter@0	2350 Added blaAQU WP_148044402.1
cstrittmatter@0	2351 Added dfrA29 WP_148044403.1
cstrittmatter@0	2352 Added blaCAM-1 WP_148044405.1
cstrittmatter@0	2353 Added blaCMY-165 WP_148044406.1
cstrittmatter@0	2354 Added blaCMY-166 WP_148044407.1
cstrittmatter@0	2355 Added blaCMY-167 WP_148044408.1
cstrittmatter@0	2356 Added blaCTX-M-227 WP_148044409.1
cstrittmatter@0	2357 Added blaCTX-M-228 WP_148044410.1
cstrittmatter@0	2358 Added blaCTX-M-229 WP_148044411.1
cstrittmatter@0	2359 Added blaDHA-29 WP_148044412.1
cstrittmatter@0	2360 Added blaGES-42 WP_148044413.1
cstrittmatter@0	2361 Added blaGES-43 WP_148044414.1
cstrittmatter@0	2362 Added blaIMP-82 WP_148044416.1
cstrittmatter@0	2363 Added blaIMP-83 WP_148044417.1
cstrittmatter@0	2364 Added blaIMP-84 WP_148044418.1
cstrittmatter@0	2365 Added blaKPC-41 WP_148044419.1
cstrittmatter@0	2366 Added blaKPC-45 WP_148044420.1
cstrittmatter@0	2367 Added blaKPC-46 WP_148044421.1
cstrittmatter@0	2368 Added blaOXA-835 WP_148044422.1
cstrittmatter@0	2369 Added blaOXA-836 WP_148044423.1
cstrittmatter@0	2370 Added blaPAU-1 WP_148044424.1
cstrittmatter@0	2371 Added blaPDC-196 WP_148044425.1
cstrittmatter@0	2372 Added blaPDC-334 WP_148044426.1
cstrittmatter@0	2373 Added blaPDC-335 WP_148044427.1
cstrittmatter@0	2374 Added blaPDC-336 WP_148044428.1
cstrittmatter@0	2375 Added blaPDC-337 WP_148044429.1
cstrittmatter@0	2376 Added blaPDC-338 WP_148044430.1
cstrittmatter@0	2377 Added blaPDC-339 WP_148044431.1
cstrittmatter@0	2378 Added blaPDC-340 WP_148044432.1
cstrittmatter@0	2379 Added blaPDC-341 WP_148044433.1
cstrittmatter@0	2380 Added blaPDC-342 WP_148044434.1
cstrittmatter@0	2381 Added blaPDC-343 WP_148044435.1
cstrittmatter@0	2382 Added blaPDC-344 WP_148044436.1
cstrittmatter@0	2383 Added blaPDC-345 WP_148044437.1
cstrittmatter@0	2384 Added blaPDC-346 WP_148044438.1
cstrittmatter@0	2385 Added blaPDC-347 WP_148044439.1
cstrittmatter@0	2386 Added blaPDC-348 WP_148044440.1
cstrittmatter@0	2387 Added blaPDC-349 WP_148044441.1
cstrittmatter@0	2388 Added blaPDC-350 WP_148044442.1
cstrittmatter@0	2389 Added blaPDC-351 WP_148044443.1
cstrittmatter@0	2390 Added blaPDC-352 WP_148044444.1
cstrittmatter@0	2391 Added blaPDC-354 WP_148044445.1
cstrittmatter@0	2392 Added blaPDC-355 WP_148044446.1
cstrittmatter@0	2393 Added blaPDC-356 WP_148044447.1
cstrittmatter@0	2394 Added blaPDC-357 WP_148044448.1
cstrittmatter@0	2395 Added blaPDC-358 WP_148044449.1
cstrittmatter@0	2396 Added blaPDC-359 WP_148044450.1
cstrittmatter@0	2397 Added blaPDC-360 WP_148044451.1
cstrittmatter@0	2398 Added blaPDC-362 WP_148044452.1
cstrittmatter@0	2399 Added blaPDC-363 WP_148044453.1
cstrittmatter@0	2400 Added blaPDC-365 WP_148044454.1
cstrittmatter@0	2401 Added blaPDC-366 WP_148044455.1
cstrittmatter@0	2402 Added blaPDC-368 WP_148044456.1
cstrittmatter@0	2403 Added blaPDC-369 WP_148044457.1
cstrittmatter@0	2404 Added blaPDC-370 WP_148044458.1
cstrittmatter@0	2405 Added blaPDC-372 WP_148044459.1
cstrittmatter@0	2406 Added blaPDC-373 WP_148044460.1
cstrittmatter@0	2407 Added blaPDC-375 WP_148044461.1
cstrittmatter@0	2408 Added blaPDC-376 WP_148044462.1
cstrittmatter@0	2409 Added blaPDC-377 WP_148044463.1
cstrittmatter@0	2410 Added blaPDC-378 WP_148044464.1
cstrittmatter@0	2411 Added blaPDC-379 WP_148044465.1
cstrittmatter@0	2412 Added blaPDC-380 WP_148044466.1
cstrittmatter@0	2413 Added blaPDC-381 WP_148044467.1
cstrittmatter@0	2414 Added blaPDC-382 WP_148044468.1
cstrittmatter@0	2415 Added blaPDC-383 WP_148044469.1
cstrittmatter@0	2416 Added blaPFM-1 WP_148044470.1
cstrittmatter@0	2417 Added blaTEM-241 WP_148044472.1
cstrittmatter@0	2418 Added blaTEM-242 WP_148044473.1
cstrittmatter@0	2419 Added blaTEM-39 WP_148044474.1
cstrittmatter@0	2420 Added blaVEB-22 WP_148044475.1
cstrittmatter@0	2421 Added blaVIM-68 WP_148044476.1
cstrittmatter@0	2422 Added mcr-1.22 WP_148044477.1
cstrittmatter@0	2423 Added mcr-5.4 WP_148044478.1
cstrittmatter@0	2424 Added blaOXA-837 WP_148281568.1
cstrittmatter@0	2425 Added gyrA_H80P WP_001281243.1
cstrittmatter@0	2426 Added gyrA_N57K WP_001281243.1
cstrittmatter@0	2427 Added gyrA_S83F WP_001281243.1
cstrittmatter@0	2428 Changes:
cstrittmatter@0	2429 faeG AAA24032.1
cstrittmatter@0	2430 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
cstrittmatter@0	2431 faeG AAA24035.1
cstrittmatter@0	2432 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
cstrittmatter@0	2433 faeG AAA24390.1
cstrittmatter@0	2434 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
cstrittmatter@0	2435 nccX AAA65102.1
cstrittmatter@0	2436 subclass METAL ->
cstrittmatter@0	2437 merB AAA88369.1
cstrittmatter@0	2438 class MECURY -> MERCURY
cstrittmatter@0	2439 subclass ORGANOMECURY -> ORGANOMERCURY
cstrittmatter@0	2440 merC AAC33908.1
cstrittmatter@0	2441 class MECURY -> MERCURY
cstrittmatter@0	2442 subclass ORGANOMECURY -> ORGANOMERCURY
cstrittmatter@0	2443 faeG AAC34727.1
cstrittmatter@0	2444 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
cstrittmatter@0	2445 merB AAC38230.1
cstrittmatter@0	2446 class MECURY -> MERCURY
cstrittmatter@0	2447 subclass ORGANOMECURY -> ORGANOMERCURY
cstrittmatter@0	2448 merC AAC38233.1
cstrittmatter@0	2449 class MECURY -> MERCURY
cstrittmatter@0	2450 subclass ORGANOMECURY -> ORGANOMERCURY
cstrittmatter@0	2451 ipaH2 AAN43435.1
cstrittmatter@0	2452 gene_family ipaH9.8 -> ipaH2
cstrittmatter@0	2453 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
cstrittmatter@0	2454 mreA AAN68577.1
cstrittmatter@0	2455 subclass METAL ->
cstrittmatter@0	2456 ipaH2 AAZ87985.1
cstrittmatter@0	2457 gene_family ipaH9.8 -> ipaH2
cstrittmatter@0	2458 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
cstrittmatter@0	2459 ipaH3 ABB62096.1
cstrittmatter@0	2460 gene_family ipaH9.8 -> ipaH3
cstrittmatter@0	2461 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH3
cstrittmatter@0	2462 ipaH2 ABB62098.1
cstrittmatter@0	2463 gene_family ipaH9.8 -> ipaH2
cstrittmatter@0	2464 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
cstrittmatter@0	2465 ipaH2 ABB66229.1
cstrittmatter@0	2466 gene_family ipaH9.8 -> ipaH2
cstrittmatter@0	2467 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
cstrittmatter@0	2468 ipaH1 ABF02983.1
cstrittmatter@0	2469 gene_family ipaH9.8 -> ipaH1
cstrittmatter@0	2470 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH1/H6
cstrittmatter@0	2471 ipaH2 ABF04028.1
cstrittmatter@0	2472 gene_family ipaH9.8 -> ipaH2
cstrittmatter@0	2473 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
cstrittmatter@0	2474 faeG ACB72721.1
cstrittmatter@0	2475 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
cstrittmatter@0	2476 ipaH2 ACD09076.1
cstrittmatter@0	2477 gene_family ipaH9.8 -> ipaH2
cstrittmatter@0	2478 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
cstrittmatter@0	2479 faeG AFH14350.1
cstrittmatter@0	2480 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
cstrittmatter@0	2481 merC BAA14138.2
cstrittmatter@0	2482 class MECURY -> MERCURY
cstrittmatter@0	2483 subclass ORGANOMECURY -> ORGANOMERCURY
cstrittmatter@0	2484 merB BAA20338.2
cstrittmatter@0	2485 class MECURY -> MERCURY
cstrittmatter@0	2486 subclass ORGANOMECURY -> ORGANOMERCURY
cstrittmatter@0	2487 merG BAA23166.1
cstrittmatter@0	2488 class MECURY -> MERCURY
cstrittmatter@0	2489 merB BAB47641.1
cstrittmatter@0	2490 class MECURY -> MERCURY
cstrittmatter@0	2491 subclass ORGANOMECURY -> ORGANOMERCURY
cstrittmatter@0	2492 merB CAC86907.1
cstrittmatter@0	2493 class MECURY -> MERCURY
cstrittmatter@0	2494 subclass ORGANOMECURY -> ORGANOMERCURY
cstrittmatter@0	2495 faeG CAE82650.1
cstrittmatter@0	2496 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
cstrittmatter@0	2497 faeG CAE82653.1
cstrittmatter@0	2498 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
cstrittmatter@0	2499 faeG CAE82670.1
cstrittmatter@0	2500 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
cstrittmatter@0	2501 mphL WP_002047670.1
cstrittmatter@0	2502 gene_family mph(B) -> mphL
cstrittmatter@0	2503 product_name Mph(B) family macrolide 2'-phosphotransferase -> macrolide 2'-phosphotransferase MphL
cstrittmatter@0	2504 poxtA WP_002415638.1
cstrittmatter@0	2505 genbank_cds_start 1856 -> 57639
cstrittmatter@0	2506 genbank_cds_stop 3484 -> 59267
cstrittmatter@0	2507 genbank_nucleotide_accession MF095097.1 -> MH746818.1
cstrittmatter@0	2508 mcr-3.22 WP_094308975.1
cstrittmatter@0	2509 refseq_nucleotide_accession NG_060581.1 -> NG_060581.2
cstrittmatter@0	2510 blaPDC-259 WP_109791193.1
cstrittmatter@0	2511 genbank_nucleotide_accession MH243333.1 -> MH243333.2
cstrittmatter@0	2512 refseq_nucleotide_accession NG_057591.1 -> NG_057591.2
cstrittmatter@0	2513 blaPDC-265 WP_109791199.1
cstrittmatter@0	2514 genbank_nucleotide_accession MH243339.1 -> MH243339.2
cstrittmatter@0	2515 refseq_nucleotide_accession NG_057597.1 -> NG_057597.2
cstrittmatter@0	2516
cstrittmatter@0	2517 - HMM library Changes:
cstrittmatter@0	2518 Total: Added 6
cstrittmatter@0	2519 Total: Prev. Release 603
cstrittmatter@0	2520 Total: Removed 1
cstrittmatter@0	2521 Total: This Release 608
cstrittmatter@0	2522 HMM Removed: NF000274.2 PF04439
cstrittmatter@0	2523 HMM Added: NF007456.1 PRK10026.1
cstrittmatter@0	2524 HMM Added: NF033636.1 acid_shock_Asr
cstrittmatter@0	2525 HMM Added: NF033877.0 arsB_Sta_pI258
cstrittmatter@0	2526 HMM Added: NF033895.1 blaCAM
cstrittmatter@0	2527 HMM Added: NF033929.1 blaAXC
cstrittmatter@0	2528 HMM Added: NF033933.0 fosA8
cstrittmatter@0	2529
cstrittmatter@0	2530 - Protein family changes:
cstrittmatter@0	2531 Total: Added 47
cstrittmatter@0	2532 Total: Prev. Release 1454
cstrittmatter@0	2533 Total: Removed 1
cstrittmatter@0	2534 Total: This Release 1500
cstrittmatter@0	2535 Family Removed: - ubiq_IpaH3
cstrittmatter@0	2536 Family Added: - ACID
cstrittmatter@0	2537 Family Added: - CDF_efflux
cstrittmatter@0	2538 Family Added: - amvA
cstrittmatter@0	2539 Family Added: NF033877.0 arsB_pI258
cstrittmatter@0	2540 Family Added: - arsB_pKW301
cstrittmatter@0	2541 Family Added: - arsB_pYV
cstrittmatter@0	2542 Family Added: NF007456.1 arsC_gluta
cstrittmatter@0	2543 Family Added: - arsR
cstrittmatter@0	2544 Family Added: - arsR_K-12
cstrittmatter@0	2545 Family Added: - arsR_R46
cstrittmatter@0	2546 Family Added: - arsR_pI258
cstrittmatter@0	2547 Family Added: - arsR_pKW301
cstrittmatter@0	2548 Family Added: - arsR_pSX267
cstrittmatter@0	2549 Family Added: - arsR_pYV
cstrittmatter@0	2550 Family Added: NF033636.1 asr
cstrittmatter@0	2551 Family Added: NF033929.1 blaAXC
cstrittmatter@0	2552 Family Added: NF033895.1 blaCAM
cstrittmatter@0	2553 Family Added: - blaPFM
cstrittmatter@0	2554 Family Added: - cif
cstrittmatter@0	2555 Family Added: - copC_Psyr
cstrittmatter@0	2556 Family Added: - dfrA29
cstrittmatter@0	2557 Family Added: - efa1
cstrittmatter@0	2558 Family Added: - erm(49)
cstrittmatter@0	2559 Family Added: - espK
cstrittmatter@0	2560 Family Added: - fieF
cstrittmatter@0	2561 Family Added: NF033933.0 fosA8
cstrittmatter@0	2562 Family Added: - hlyA-alpha
cstrittmatter@0	2563 Family Added: - icr-Mo
cstrittmatter@0	2564 Family Added: - iha
cstrittmatter@0	2565 Family Added: - ipaH1
cstrittmatter@0	2566 Family Added: - ipaH2
cstrittmatter@0	2567 Family Added: - ipaH3
cstrittmatter@0	2568 Family Added: - ipaH4
cstrittmatter@0	2569 Family Added: - ipaH5
cstrittmatter@0	2570 Family Added: - ipa_gen
cstrittmatter@0	2571 Family Added: - kdeA
cstrittmatter@0	2572 Family Added: - lmrC_abcf
cstrittmatter@0	2573 Family Added: - mphH
cstrittmatter@0	2574 Family Added: - mphK
cstrittmatter@0	2575 Family Added: - mphL
cstrittmatter@0	2576 Family Added: - mphM
cstrittmatter@0	2577 Family Added: - mphN
cstrittmatter@0	2578 Family Added: - pic_auto
cstrittmatter@0	2579 Family Added: - sab
cstrittmatter@0	2580 Family Added: - senB
cstrittmatter@0	2581 Family Added: - stb
cstrittmatter@0	2582 Family Added: - tet(56)
cstrittmatter@0	2583 Family Changed: NF000274.2 ant6_gen updated to - ant6_gen
cstrittmatter@0	2584
cstrittmatter@0	2585 ---------------------------------------------------------------------
cstrittmatter@0	2586 Changes included in 2019-07-10.1
cstrittmatter@0	2587 ---------------------------------------------------------------------
cstrittmatter@0	2588
cstrittmatter@0	2589 New alleles and sequences were added, a few product names were made more
cstrittmatter@0	2590 specific as more phenotype information became available. Cleanup of the
cstrittmatter@0	2591 database caused some families and HMMs not used by AMRFinderPlus to be removed.
cstrittmatter@0	2592
cstrittmatter@0	2593 - Protein changes:
cstrittmatter@0	2594 Total: Added 57
cstrittmatter@0	2595 Total: Prev. Release 5757
cstrittmatter@0	2596 Total: Removed 3
cstrittmatter@0	2597 Total: This Release 5811
cstrittmatter@0	2598 Protein Removed: WP_029728367.1 blaB BlaB_family_subclass_B1_metallo-beta-lactamase
cstrittmatter@0	2599 Protein Removed: WP_063842622.1 blaB BlaB_family_subclass_B1_metallo-beta-lactamase
cstrittmatter@0	2600 Protein Removed: WP_063842629.1 blaGOB GOB_family_subclass_B3_metallo-beta-lactamase
cstrittmatter@0	2601 Protein Added: AAA21095.1 arsB_R773 arsenite_efflux_transporter_membrane_subunit_ArsB
cstrittmatter@0	2602 Protein Added: ABQ18953.1 emrD3 multidrug_efflux_MFS_transporter_EmrD-3
cstrittmatter@0	2603 Protein Added: WP_000850833.1 emrD3 multidrug_efflux_MFS_transporter_EmrD-3
cstrittmatter@0	2604 Protein Added: WP_010446567.1 tet(B) tetracycline_efflux_MFS_transporter_Tet(B)
cstrittmatter@0	2605 Protein Added: WP_039902635.1 blaOXA-134_like OXA-134_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-646
cstrittmatter@0	2606 Protein Added: WP_063116263.1 arsB_R773 arsenite_efflux_transporter_membrane_subunit_ArsB
cstrittmatter@0	2607 Protein Added: WP_063844329.1 dfrA12 trimethoprim-resistant_dihydrofolate_reductase_DfrA12
cstrittmatter@0	2608 Protein Added: WP_063856066.1 tet(B) tetracycline_efflux_MFS_transporter_Tet(B)
cstrittmatter@0	2609 Protein Added: WP_063856068.1 tet(B) tetracycline_efflux_MFS_transporter_Tet(B)
cstrittmatter@0	2610 Protein Added: WP_070342370.1 dfrA7 trimethoprim-resistant_dihydrofolate_reductase_DfrA7
cstrittmatter@0	2611 Protein Added: WP_071593205.1 aadA1bt ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA1bt
cstrittmatter@0	2612 Protein Added: WP_071593208.1 aadA1bt ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA1bt
cstrittmatter@0	2613 Protein Added: WP_086264536.1 blaOXA-213_like OXA-213_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-832
cstrittmatter@0	2614 Protein Added: WP_094323230.1 mcr-2 phosphoethanolamine--lipid_A_transferase_MCR-2.3
cstrittmatter@0	2615 Protein Added: WP_110174956.1 blaTEM class_A_beta-lactamase_TEM-235
cstrittmatter@0	2616 Protein Added: WP_125052736.1 blaOXA-51_like OXA-51_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-834
cstrittmatter@0	2617 Protein Added: WP_129336087.1 mcr-1 phosphoethanolamine--lipid_A_transferase_MCR-1.19
cstrittmatter@0	2618 Protein Added: WP_135350920.1 blaGES class_A_beta-lactamase_GES-41
cstrittmatter@0	2619 Protein Added: WP_140423191.1 aac(6')-Ib AAC(6')-Ib_family_aminoglycoside_6'-N-acetyltransferase
cstrittmatter@0	2620 Protein Added: WP_140423278.1 aadA1 ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA1
cstrittmatter@0	2621 Protein Added: WP_140423279.1 aadA2 ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA2
cstrittmatter@0	2622 Protein Added: WP_140423280.1 aadA2 ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA2
cstrittmatter@0	2623 Protein Added: WP_140423281.1 aadA2 ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA2
cstrittmatter@0	2624 Protein Added: WP_140423282.1 aadA5 ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA5
cstrittmatter@0	2625 Protein Added: WP_140423283.1 dfrA1 trimethoprim-resistant_dihydrofolate_reductase_DfrA1
cstrittmatter@0	2626 Protein Added: WP_140423284.1 dfrA12 trimethoprim-resistant_dihydrofolate_reductase_DfrA12
cstrittmatter@0	2627 Protein Added: WP_140423285.1 dfrA17 trimethoprim-resistant_dihydrofolate_reductase_DfrA17
cstrittmatter@0	2628 Protein Added: WP_140423286.1 dfrA17 trimethoprim-resistant_dihydrofolate_reductase_DfrA17
cstrittmatter@0	2629 Protein Added: WP_140423287.1 dfrA17 trimethoprim-resistant_dihydrofolate_reductase_DfrA17
cstrittmatter@0	2630 Protein Added: WP_140423305.1 blaADC class_C_beta-lactamase_ADC-195
cstrittmatter@0	2631 Protein Added: WP_140423306.1 blaB subclass_B1_metallo-beta-lactamase_BlaB-15
cstrittmatter@0	2632 Protein Added: WP_140423307.1 blaCMY class_C_beta-lactamase_CMY-164
cstrittmatter@0	2633 Protein Added: WP_140423308.1 blaFRI carbapenem-hydrolyzing_class_A_beta-lactamase_FRI-8
cstrittmatter@0	2634 Protein Added: WP_140423309.1 blaFRI carbapenem-hydrolyzing_class_A_beta-lactamase_FRI-9
cstrittmatter@0	2635 Protein Added: WP_140423310.1 blaIMI carbapenem-hydrolyzing_class_A_beta-lactamase_IMI-19
cstrittmatter@0	2636 Protein Added: WP_140423311.1 blaKPC carbapenem-hydrolyzing_class_A_beta-lactamase_KPC-44
cstrittmatter@0	2637 Protein Added: WP_140423312.1 blaOXA-211_like OXA-211_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-643
cstrittmatter@0	2638 Protein Added: WP_140423313.1 blaOXA-211_like OXA-211_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-644
cstrittmatter@0	2639 Protein Added: WP_140423314.1 blaOXA-211_like OXA-211_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-645
cstrittmatter@0	2640 Protein Added: WP_140423315.1 blaOXA-134_like OXA-134_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-647
cstrittmatter@0	2641 Protein Added: WP_140423316.1 blaOXA-134_like OXA-134_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-648
cstrittmatter@0	2642 Protein Added: WP_140423317.1 blaOXA-211_like OXA-211_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-650
cstrittmatter@0	2643 Protein Added: WP_140423318.1 blaOXA-143_like OXA-143_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-825
cstrittmatter@0	2644 Protein Added: WP_140423319.1 blaOXA-213_like OXA-213_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-826
cstrittmatter@0	2645 Protein Added: WP_140423320.1 blaOXA-10_like OXA-10_family_class_D_beta-lactamase_OXA-827
cstrittmatter@0	2646 Protein Added: WP_140423321.1 blaOXA-51_like OXA-51_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-828
cstrittmatter@0	2647 Protein Added: WP_140423322.1 blaOXA-51_like OXA-51_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-829
cstrittmatter@0	2648 Protein Added: WP_140423323.1 blaOXA-51_like OXA-51_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-831
cstrittmatter@0	2649 Protein Added: WP_140423324.1 blaOXA-48_like OXA-48_family_class_D_beta-lactamase_OXA-833
cstrittmatter@0	2650 Protein Added: WP_140423325.1 blaPDC class_C_beta-lactamase_PDC-333
cstrittmatter@0	2651 Protein Added: WP_140423326.1 blaPOM subclass_B3_metallo-beta-lactamase_POM-2
cstrittmatter@0	2652 Protein Added: WP_140423327.1 blaVIM subclass_B1_metallo-beta-lactamase_VIM-64
cstrittmatter@0	2653 Protein Added: WP_140423328.1 blaVIM subclass_B1_metallo-beta-lactamase_VIM-65
cstrittmatter@0	2654 Protein Added: WP_140423329.1 mcr-1 phosphoethanolamine--lipid_A_transferase_MCR-1.20
cstrittmatter@0	2655 Protein Added: WP_140423330.1 mcr-1 phosphoethanolamine--lipid_A_transferase_MCR-1.21
cstrittmatter@0	2656 Protein Added: WP_140423331.1 mcr-3 phosphoethanolamine--lipid_A_transferase_MCR-3.26
cstrittmatter@0	2657 Protein Added: WP_140423332.1 mcr-3 phosphoethanolamine--lipid_A_transferase_MCR-3.30
cstrittmatter@0	2658 Protein Modified: ACM67153.1 lamda-2 intimin_type_lambda updated to ACM67153.1 lambda-2 intimin_type_lambda
cstrittmatter@0	2659 Protein Modified: WP_001100753.1 blaPER class_A_extended-spectrum_beta-lactamase_PER-1 updated to WP_001100753.1 blaPER inhibitor-resistant_class_A_extended-spectrum_beta-lactamase_PER-1
cstrittmatter@0	2660 Protein Modified: WP_002317273.1 vanR-B VanB-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_002317273.1 vanR-B VanB-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
cstrittmatter@0	2661 Protein Modified: WP_002368697.1 vanR-B VanB-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_002368697.1 vanR-B VanB-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
cstrittmatter@0	2662 Protein Modified: WP_032489743.1 vanR-B VanB-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_032489743.1 vanR-B VanB-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
cstrittmatter@0	2663 Protein Modified: WP_063856719.1 vanR-B VanB-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_063856719.1 vanR-B VanB-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
cstrittmatter@0	2664 Protein Modified: WP_063856723.1 vanR-B VanB-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_063856723.1 vanR-B VanB-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
cstrittmatter@0	2665 Protein Modified: WP_063856729.1 vanR-O VanO-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_063856729.1 vanR-O VanO-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
cstrittmatter@0	2666 Protein Modified: WP_063860636.1 blaKPC carbapenem-hydrolyzing_class_A_beta-lactamase_KPC-14 updated to WP_063860636.1 blaKPC inhibitor-resistant_class_A_extended-spectrum_beta-lactamase_KPC-14
cstrittmatter@0	2667 - AMR HMM library Changes:
cstrittmatter@0	2668 Total: Added 5
cstrittmatter@0	2669 Total: Prev. Release 610
cstrittmatter@0	2670 Total: Removed 12
cstrittmatter@0	2671 Total: This Release 603
cstrittmatter@0	2672 HMM Removed: NF000252.1 MexX
cstrittmatter@0	2673 HMM Removed: NF000282.2 RND_permease_1
cstrittmatter@0	2674 HMM Removed: NF000314.1 adeB
cstrittmatter@0	2675 HMM Removed: NF000315.1 adeC-adeK-oprM
cstrittmatter@0	2676 HMM Removed: NF007842.1 PRK10555.1
cstrittmatter@0	2677 HMM Removed: NF011706.2 PRK15127.1
cstrittmatter@0	2678 HMM Removed: NF028537.1 P_eth_NH2_trans
cstrittmatter@0	2679 HMM Removed: NF033086.2 penta_rpt_Qnr
cstrittmatter@0	2680 HMM Removed: NF033134.0 cmlA_floR
cstrittmatter@0	2681 HMM Removed: NF033143.1 efflux_OM_AdeK
cstrittmatter@0	2682 HMM Removed: NF033643.1 EspJ_gen
cstrittmatter@0	2683 HMM Removed: NF033651.1 cyto_nec_fctrs
cstrittmatter@0	2684 HMM Added: NF000478.2 linco_LnuE
cstrittmatter@0	2685 HMM Added: NF012180.1 tet_MFS_43
cstrittmatter@0	2686 HMM Added: NF033866.1 blaCDD
cstrittmatter@0	2687 HMM Added: NF033867.1 blaPAU
cstrittmatter@0	2688 HMM Added: NF033868.0 trim_DfrA36
cstrittmatter@0	2689 - Protein family changes:
cstrittmatter@0	2690 Total: Added 11
cstrittmatter@0	2691 Total: Prev. Release 1449
cstrittmatter@0	2692 Total: Removed 6
cstrittmatter@0	2693 Total: This Release 1454
cstrittmatter@0	2694 Family Removed: NF011706.2 acrB
cstrittmatter@0	2695 Family Removed: NF007842.1 acrD
cstrittmatter@0	2696 Family Removed: NF000314.1 adeB/adeJ
cstrittmatter@0	2697 Family Removed: NF033143.1 adeK
cstrittmatter@0	2698 Family Removed: - lamda
cstrittmatter@0	2699 Family Removed: - lamda-2
cstrittmatter@0	2700 Family Added: - aadA1bt
cstrittmatter@0	2701 Family Added: - arsB
cstrittmatter@0	2702 Family Added: - arsB_R773
cstrittmatter@0	2703 Family Added: NF033866.1 blaCDD
cstrittmatter@0	2704 Family Added: NF033867.1 blaPAU
cstrittmatter@0	2705 Family Added: NF033868.0 dfrA36
cstrittmatter@0	2706 Family Added: - emrD3
cstrittmatter@0	2707 Family Added: - lambda
cstrittmatter@0	2708 Family Added: - lambda-2
cstrittmatter@0	2709 Family Added: NF000478.2 lnu(E)
cstrittmatter@0	2710 Family Added: NF012180.1 tet(43)
cstrittmatter@0	2711 Family Changed: NF030466.1 MerP_Gneg updated to TIGR02052.1 MerP_Gneg
cstrittmatter@0	2712 Family Changed: NF030467.1 merA updated to TIGR02053.1 merA
cstrittmatter@0	2713
cstrittmatter@0	2714
cstrittmatter@0	2715 ---------------------------------------------------------------------
cstrittmatter@0	2716 Changes included in 2019-06-18.1
cstrittmatter@0	2717 ---------------------------------------------------------------------
cstrittmatter@0	2718
cstrittmatter@0	2719 This the first alpha release of the AMRFinderPlus database. For this and all
cstrittmatter@0	2720 following releases there is a distinction between "core" proteins which
cstrittmatter@0	2721 correspond to the genes that would previously have been reported by AMRFinder
cstrittmatter@0	2722 and "plus" proteins that are new genes and classes of genes. The "core"
cstrittmatter@0	2723 designation is given to proteins where we believe their presence is likely to
cstrittmatter@0	2724 have an important effect on antimicrobial resistance.
cstrittmatter@0	2725
cstrittmatter@0	2726 * Screen for select point mutations for antibiotic resistance from Salmonella,
cstrittmatter@0	2727 E. coli, and Campylobacter
cstrittmatter@0	2728 * Protein mutations in: 50S_L22 protein, acrB, acrR, basR, cmeR, cyaA,
cstrittmatter@0	2729 fabG, fabI, folP, gyrA, gyrB, lon, marR, murA, nfsA, ompF, parC, parE,
cstrittmatter@0	2730 pmrA, pmrB, ptsI, ramR, rpoB, rpsL, soxR, soxS, tufA, uhpA, uhpT
cstrittmatter@0	2731 * Nucleotide mutations in 16S and 23S rRNA
cstrittmatter@0	2732 * Included point mutations are listed in the reference gene database
cstrittmatter@0	2733 (https://www.ncbi.nlm.nih.gov/pathogens/isolates#/refgene/)
cstrittmatter@0	2734 * New "Plus" genes
cstrittmatter@0	2735 * virulence factors
cstrittmatter@0	2736 * biocide resistance
cstrittmatter@0	2737 * metal resistance
cstrittmatter@0	2738 * heat resistance
cstrittmatter@0	2739 * acid resistance
cstrittmatter@0	2740 * Combined and integrated results from nucleotide and protein searches
cstrittmatter@0	2741
cstrittmatter@0	2742 File formats have changed significantly. See https://github.com/evolarjun/amr/wiki
cstrittmatter@0	2743 for details.
cstrittmatter@0	2744
cstrittmatter@0	2745 Since release 2019-04-29.1 only one change has been made to the core AMR
cstrittmatter@0	2746 proteins. Qac's are now categorized under Type STRESS and Subtype BIOCIDE.
cstrittmatter@0	2747
cstrittmatter@0	2748 - Protein changes:
cstrittmatter@0	2749 Prev. Release: 4942
cstrittmatter@0	2750 This Release: 5718
cstrittmatter@0	2751 Added: 776
cstrittmatter@0	2752 Modified: 0
cstrittmatter@0	2753
cstrittmatter@0	2754 Protein Added: ABF69110.1 eae intimin type beta
cstrittmatter@0	2755 Protein Added: ABF69117.1 eae intimin type epsilon
cstrittmatter@0	2756 Protein Added: ABF69121.1 eae intimin type epsilon
cstrittmatter@0	2757 Protein Added: ABF69122.1 eae intimin type alpha
cstrittmatter@0	2758 Protein Added: KYU89760.1 subB subtilase AB5 cytotoxin subunit B
cstrittmatter@0	2759 Protein Added: AAG16664.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2760 Protein Added: AAG16667.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2761 Protein Added: AAG16676.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2762 Protein Added: AAB09625.1 arsD arsenite efflux transporter metallochaperone ArsD
cstrittmatter@0	2763 Protein Added: AAB09626.1 arsA arsenite efflux transporter ATPase subunit ArsA
cstrittmatter@0	2764 Protein Added: CAJ76690.1 stx1Aa Shiga toxin Stx1a subunit A
cstrittmatter@0	2765 Protein Added: CAJ76692.1 stx1Aa Shiga toxin Stx1a subunit A
cstrittmatter@0	2766 Protein Added: AAA98291.1 terC tellurium resistance membrane protein TerC
cstrittmatter@0	2767 Protein Added: AAA98293.1 terE tellurium resistance cAMP binding protein TerE
cstrittmatter@0	2768 Protein Added: AAG27731.1 norM sodium-coupled multidrug efflux MATE transporter NorM
cstrittmatter@0	2769 Protein Added: ABF02983.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
cstrittmatter@0	2770 Protein Added: ABF04028.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
cstrittmatter@0	2771 Protein Added: BAE98279.1 bfpA bundle-forming pilus major subunit BfpA
cstrittmatter@0	2772 Protein Added: BAE98281.1 bfpA bundle-forming pilus major subunit BfpA
cstrittmatter@0	2773 Protein Added: CAC14596.1 smeF multidrug efflux RND transporter outer membrane subunit SmeF
cstrittmatter@0	2774 Protein Added: AAA83973.1 merR1 mercury resistance transcriptional regulator MerR1
cstrittmatter@0	2775 Protein Added: AAA83975.1 merT mercuric transport protein MerT
cstrittmatter@0	2776 Protein Added: AAA98292.1 terD tellurium resistance membrane protein TerD
cstrittmatter@0	2777 Protein Added: AAG34504.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2778 Protein Added: APX31172.1 yfdX1 heat resistance protein YfdX1
cstrittmatter@0	2779 Protein Added: APX31174.1 hdeD-GI heat resistance membrane protein HdeD-GI
cstrittmatter@0	2780 Protein Added: APX31176.1 trxLHR heat resistance system thioredoxin Trx-GI
cstrittmatter@0	2781 Protein Added: APX31177.1 kefB-GI heat resistance system K+/H+ antiporter KefB-GI
cstrittmatter@0	2782 Protein Added: APX31178.1 psi-GI heat resistance protein PsiE-GI
cstrittmatter@0	2783 Protein Added: AAA85087.1 f17a F17A fimbrial adhesin
cstrittmatter@0	2784 Protein Added: AAA85196.1 cnf1 cytotoxic necrotizing factor CNF1
cstrittmatter@0	2785 Protein Added: AAG37043.1 espC serine protease autotransporter toxin EspC
cstrittmatter@0	2786 Protein Added: ABI93207.1 fedF F18 fimbrial adhesin subunit FedF
cstrittmatter@0	2787 Protein Added: BAF33872.1 capU putative hexosyltransferase CapU
cstrittmatter@0	2788 Protein Added: BAF33878.1 aggR aggregative adherence transcriptional regulator AggR
cstrittmatter@0	2789 Protein Added: BAF33885.1 sepA serine protease autotransporter toxin SepA
cstrittmatter@0	2790 Protein Added: BAF33888.1 agg4D aggregative adherence fimbria 4 chaperone Agg4D/HdaD
cstrittmatter@0	2791 Protein Added: BAF33891.1 agg4A aggregative adherence fimbria 4 major subunit Agg4A/HdaA
cstrittmatter@0	2792 Protein Added: BAF33901.1 aatA dispersin export ABC transporter outer membrane protein AatA
cstrittmatter@0	2793 Protein Added: BAF34018.1 aap dispersin Aap
cstrittmatter@0	2794 Protein Added: ABJ00546.1 iss increased serum survival lipoprotein Iss
cstrittmatter@0	2795 Protein Added: ABJ02430.1 ireA TonB-dependent siderophore receptor IreA
cstrittmatter@0	2796 Protein Added: OPH66324.1 lpfA1 long polar fimbria major subunit LpfA1
cstrittmatter@0	2797 Protein Added: ABJ90288.1 fedF F18 fimbrial adhesin subunit FedF
cstrittmatter@0	2798 Protein Added: AAA86846.1 terZ tellurium resistance-associated protein TerZ
cstrittmatter@0	2799 Protein Added: ABC67318.2 stx2Aa Shiga toxin Stx2a subunit A
cstrittmatter@0	2800 Protein Added: AAG40758.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	2801 Protein Added: AAA88371.1 merE broad-spectrum mercury transporter MerE
cstrittmatter@0	2802 Protein Added: AAG42788.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2803 Protein Added: ASF80766.1 yfdX2 heat resistance protein YfdX2
cstrittmatter@0	2804 Protein Added: ASF80771.1 shsP small heat shock protein sHSP20-GI
cstrittmatter@0	2805 Protein Added: CAM11313.1 nleA type III secretion system effector NleA
cstrittmatter@0	2806 Protein Added: CAM11314.1 nleA type III secretion system effector NleA
cstrittmatter@0	2807 Protein Added: CAM11315.1 nleA type III secretion system effector NleA
cstrittmatter@0	2808 Protein Added: CAM11317.1 nleA type III secretion system effector NleA
cstrittmatter@0	2809 Protein Added: CAM11321.1 nleA type III secretion system effector NleA
cstrittmatter@0	2810 Protein Added: CAM11323.1 nleA type III secretion system effector NleA
cstrittmatter@0	2811 Protein Added: CAM11324.1 nleA type III secretion system effector NleA
cstrittmatter@0	2812 Protein Added: CAM11325.1 nleA type III secretion system effector NleA
cstrittmatter@0	2813 Protein Added: AAA92618.1 f17a F17A fimbrial adhesin
cstrittmatter@0	2814 Protein Added: AAA92621.1 f17g F17G fimbrial adhesin
cstrittmatter@0	2815 Protein Added: AAA93060.1 arsD arsenite efflux transporter metallochaperone ArsD
cstrittmatter@0	2816 Protein Added: AAG53662.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2817 Protein Added: BAF45432.1 tccP Tir-cytoskeleton coupling protein TccP
cstrittmatter@0	2818 Protein Added: BAF45437.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2819 Protein Added: BAF45439.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2820 Protein Added: BAF45440.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2821 Protein Added: BAF45447.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2822 Protein Added: BAF45451.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2823 Protein Added: BAF45459.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2824 Protein Added: ABM90581.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2825 Protein Added: ABM90583.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2826 Protein Added: ABM90587.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2827 Protein Added: ABM90589.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2828 Protein Added: ABM90597.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2829 Protein Added: ABM90605.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2830 Protein Added: ABM90615.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	2831 Protein Added: AAC46147.1 yfeA iron/manganese ABC transporter substrate-binding protein YfeA
cstrittmatter@0	2832 Protein Added: AAC46148.1 yfeB iron/manganese ABC transporter ATP-binding protein YfeB
cstrittmatter@0	2833 Protein Added: AAC46150.1 yfeD iron/manganese ABC transporter permease subunit YfeD
cstrittmatter@0	2834 Protein Added: ATE69525.1 acr3 arsenite efflux transporter Acr3
cstrittmatter@0	2835 Protein Added: AAG55141.1 nleC type III secretion system effector zinc metalloprotease NleC
cstrittmatter@0	2836 Protein Added: AAG56990.1 espJ type III secretion system effector ADP-ribosyltransferase EspJ
cstrittmatter@0	2837 Protein Added: AAG58695.1 lpfA1 long polar fimbria major subunit LpfA1
cstrittmatter@0	2838 Protein Added: AAG58814.1 espF type III secretion system LEE effector EspF
cstrittmatter@0	2839 Protein Added: AAG58818.1 espB type III secretion system LEE translocon pore-forming subunit EspB
cstrittmatter@0	2840 Protein Added: AAG58825.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	2841 Protein Added: AAK15050.1 ttgR efflux transport transcriptional regulator TtgR
cstrittmatter@0	2842 Protein Added: AAK16940.1 nleA type III secretion system effector NleA
cstrittmatter@0	2843 Protein Added: AAK17180.1 nfaE Dr family non-fimbrial adhesin I chaperone NfaE
cstrittmatter@0	2844 Protein Added: AAK18385.1 sepA serine protease autotransporter toxin SepA
cstrittmatter@0	2845 Protein Added: AAK18444.1 ipaD type III secretion system needle tip complex protein IpaD
cstrittmatter@0	2846 Protein Added: BAB37280.1 nleB type III secretion system effector arginine glycosyltransferase NleB
cstrittmatter@0	2847 Protein Added: BAB38093.1 lpfA2 long polar fimbria major subunit LpfA2
cstrittmatter@0	2848 Protein Added: AAC44736.1 terW tellurium resistance protein TerW
cstrittmatter@0	2849 Protein Added: AVL28824.1 aar AggR-activated transcriptional regulator Aar
cstrittmatter@0	2850 Protein Added: SPD96882.1 silS copper/silver sensor histidine kinase SilS
cstrittmatter@0	2851 Protein Added: SPD96883.1 silR copper/silver response regulator transcription factor SilR
cstrittmatter@0	2852 Protein Added: SPD96884.1 silC Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC
cstrittmatter@0	2853 Protein Added: CAA57177.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	2854 Protein Added: CAA57175.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	2855 Protein Added: CAA57173.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	2856 Protein Added: CAA57171.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	2857 Protein Added: BAB43874.1 cadD cadmium resistance transporter CadD
cstrittmatter@0	2858 Protein Added: AAK48830.1 cadR cadmium resistance transcriptional regulator CadR
cstrittmatter@0	2859 Protein Added: BAF52034.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2860 Protein Added: BAF52035.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2861 Protein Added: BAF52033.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2862 Protein Added: BAF52358.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2863 Protein Added: BAF52360.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2864 Protein Added: BAF52362.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2865 Protein Added: BAF52363.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2866 Protein Added: BAF52364.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2867 Protein Added: BAF52365.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2868 Protein Added: BAF52366.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2869 Protein Added: BAF52367.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2870 Protein Added: BAF52370.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2871 Protein Added: BAF52374.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2872 Protein Added: BAF52377.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2873 Protein Added: BAF52548.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	2874 Protein Added: BAF52549.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	2875 Protein Added: BAB47641.1 merB organomercurial lyase MerB
cstrittmatter@0	2876 Protein Added: AAK56853.1 chrR class I chromate reductase ChrR
cstrittmatter@0	2877 Protein Added: CAC39286.1 espI serine protease autotransporter EspI
cstrittmatter@0	2878 Protein Added: AAA83977.1 merA mercury(II) reductase
cstrittmatter@0	2879 Protein Added: AAA23405.1 fasA F6 fimbrial major subunit FasA
cstrittmatter@0	2880 Protein Added: AAA23421.1 fim41a fimbrial adhesin F41 protein Fim41a
cstrittmatter@0	2881 Protein Added: AAK66972.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	2882 Protein Added: AAC41416.1 cfaC CFA/I pilus usher protein CfaC
cstrittmatter@0	2883 Protein Added: CAB54534.2 mchB microcin H47
cstrittmatter@0	2884 Protein Added: AAK69562.1 srpS solvent efflux transporter transcriptional repressor SrpS
cstrittmatter@0	2885 Protein Added: AAA23734.1 fedA F18 fimbrial major subunit FedA
cstrittmatter@0	2886 Protein Added: ABQ02454.1 eae intimin type rho
cstrittmatter@0	2887 Protein Added: AAA24032.1 faeG F4 fimbrial adhesin subunit FaeG
cstrittmatter@0	2888 Protein Added: AAA24035.1 faeG F4 fimbrial adhesin subunit FaeG
cstrittmatter@0	2889 Protein Added: AAA24390.1 faeG F4 fimbrial adhesin subunit FaeG
cstrittmatter@0	2890 Protein Added: AXV27948.1 agg3C aggregative adherence fimbria 3 usher protein Agg3C
cstrittmatter@0	2891 Protein Added: AAA19189.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	2892 Protein Added: AAA19190.1 stx2Be Shiga toxin Stx2e subunit B
cstrittmatter@0	2893 Protein Added: AAA24632.1 stx2Af Shiga toxin Stx2f subunit A
cstrittmatter@0	2894 Protein Added: AAA24633.1 stx2Bf Shiga toxin Stx2f subunit B
cstrittmatter@0	2895 Protein Added: AAA71893.1 stx1Aa Shiga toxin Stx1a subunit A
cstrittmatter@0	2896 Protein Added: AAA71894.1 stx1Ba Shiga toxin Stx1a subunit B
cstrittmatter@0	2897 Protein Added: AAA24653.1 sta1 heat-stable enterotoxin ST-I group a
cstrittmatter@0	2898 Protein Added: ABR09925.1 stx2Ba Shiga toxin Stx2a subunit B
cstrittmatter@0	2899 Protein Added: ABR09934.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	2900 Protein Added: ABR09935.1 stx2Bc Shiga toxin Stx2c subunit B
cstrittmatter@0	2901 Protein Added: ABR09936.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	2902 Protein Added: ABR09937.1 stx2Bd Shiga toxin Stx2d subunit B
cstrittmatter@0	2903 Protein Added: ABR09945.1 stx2Ba Shiga toxin Stx2a subunit B
cstrittmatter@0	2904 Protein Added: ABR09961.1 stx2Ba Shiga toxin Stx2a subunit B
cstrittmatter@0	2905 Protein Added: ABR09963.1 stx2Ba Shiga toxin Stx2a subunit B
cstrittmatter@0	2906 Protein Added: ABR10024.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	2907 Protein Added: CAA30714.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	2908 Protein Added: CAA30715.1 stx2Ba Shiga toxin Stx2a subunit B
cstrittmatter@0	2909 Protein Added: AAB59075.1 merT mercuric transport protein MerT
cstrittmatter@0	2910 Protein Added: AAA88369.1 merB organomercurial lyase MerB
cstrittmatter@0	2911 Protein Added: AAA88370.1 merD mercury resistance co-regulator MerD
cstrittmatter@0	2912 Protein Added: AAA98222.1 merT mercuric transport protein MerT
cstrittmatter@0	2913 Protein Added: AAA98223.1 merP mercury resistance system periplasmic binding protein MerP
cstrittmatter@0	2914 Protein Added: AAA25638.1 arsC thioredoxin-dependent arsenate reductase
cstrittmatter@0	2915 Protein Added: AAA88432.1 chrA chromate resistance efflux protein ChrA
cstrittmatter@0	2916 Protein Added: AAA25803.1 copR heavy metal response regulator transcription factor CopR
cstrittmatter@0	2917 Protein Added: AAA25804.1 copS copper resistance membrane spanning protein CopS
cstrittmatter@0	2918 Protein Added: AAA25806.1 copA laccase-like oxidase CopA
cstrittmatter@0	2919 Protein Added: AAA25807.1 copB copper-binding protein CopB
cstrittmatter@0	2920 Protein Added: CAC48396.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	2921 Protein Added: CAC48398.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	2922 Protein Added: AAA21094.1 arsA arsenite efflux transporter ATPase subunit ArsA
cstrittmatter@0	2923 Protein Added: BAB62897.1 cofA type IV pilus CFA/III major pilin
cstrittmatter@0	2924 Protein Added: BAB62907.1 cofA type IV pilus CFA/III major pilin
cstrittmatter@0	2925 Protein Added: CAA63849.1 ehxA enterohemolysin
cstrittmatter@0	2926 Protein Added: AAA26402.1 klaB tellurium resistance system protein klaB
cstrittmatter@0	2927 Protein Added: AAA26403.1 klaC tellurium resistance system protein klaC
cstrittmatter@0	2928 Protein Added: AAK97136.1 cfaC CFA/I pilus usher protein CfaC
cstrittmatter@0	2929 Protein Added: AAK99679.1 pmrA multidrug efflux MFS transporter PmrA
cstrittmatter@0	2930 Protein Added: CAC69248.1 merR mercury resistance transcriptional regulator MerR
cstrittmatter@0	2931 Protein Added: CAC69249.1 merT mercuric transport protein MerT
cstrittmatter@0	2932 Protein Added: CAC69250.1 merP mercury resistance system periplasmic binding protein MerP
cstrittmatter@0	2933 Protein Added: CAC69251.1 merA mercury(II) reductase
cstrittmatter@0	2934 Protein Added: BAB64566.1 bexA multidrug efflux MATE transporter BexA
cstrittmatter@0	2935 Protein Added: AAA27589.1 arsC thioredoxin-dependent arsenate reductase
cstrittmatter@0	2936 Protein Added: ABU55302.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	2937 Protein Added: BAF76383.1 ttgA toluene efflux RND transporter periplasmic adaptor subunit TtgA
cstrittmatter@0	2938 Protein Added: BAF76384.1 ttgB multidrug efflux RND transporter permease subunit TtgB
cstrittmatter@0	2939 Protein Added: ABV01314.1 ltcA heat-labile enterotoxin LT subunit A
cstrittmatter@0	2940 Protein Added: BAF79679.1 smdA multidrug efflux ABC transporter permease/ATP-binding subunit SmdA
cstrittmatter@0	2941 Protein Added: BAF79680.1 smdB multidrug efflux ABC transporter permease/ATP-binding subunit SmdB
cstrittmatter@0	2942 Protein Added: ABV16438.1 eatA serine protease autotransporter toxin EatA
cstrittmatter@0	2943 Protein Added: BAB68369.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	2944 Protein Added: BAB68370.1 stx2Bc Shiga toxin Stx2c subunit B
cstrittmatter@0	2945 Protein Added: BAF80121.1 ssmE multidrug efflux SMR transporter SsmE
cstrittmatter@0	2946 Protein Added: AAL06376.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	2947 Protein Added: AAL06381.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	2948 Protein Added: AAL06387.1 espF type III secretion system LEE effector EspF
cstrittmatter@0	2949 Protein Added: AAC23256.1 hmrM sodium-coupled multidrug efflux MATE transporter HmrM
cstrittmatter@0	2950 Protein Added: ABQ02442.1 ehxA enterohemolysin
cstrittmatter@0	2951 Protein Added: ABQ02443.1 ehxA enterohemolysin
cstrittmatter@0	2952 Protein Added: ABQ02445.1 ehxA enterohemolysin
cstrittmatter@0	2953 Protein Added: ABQ02447.1 ehxA enterohemolysin
cstrittmatter@0	2954 Protein Added: ABQ02448.1 ehxA enterohemolysin
cstrittmatter@0	2955 Protein Added: AAL08400.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	2956 Protein Added: BAF92845.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	2957 Protein Added: AAL14441.1 adeC multidrug efflux RND transporter AdeABC outer membrane channel subunit AdeC
cstrittmatter@0	2958 Protein Added: CAP17609.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	2959 Protein Added: CAP17610.1 stx2Be Shiga toxin Stx2e subunit B
cstrittmatter@0	2960 Protein Added: AAL18821.1 epeA serine protease autotransporter EpeA
cstrittmatter@0	2961 Protein Added: AAL19305.1 mdsB multidrug efflux RND transporter permease subunit MdsB
cstrittmatter@0	2962 Protein Added: AAL19306.1 mdsA multidrug efflux RND transporter periplasmic adaptor subunit MdsA
cstrittmatter@0	2963 Protein Added: AAL19307.1 golT gold/copper-translocating P-type ATPase GolT
cstrittmatter@0	2964 Protein Added: AAL19308.1 golS Au(I) sensor transcriptional regulator GolS
cstrittmatter@0	2965 Protein Added: BAF96525.1 espJ type III secretion system effector ADP-ribosyltransferase EspJ
cstrittmatter@0	2966 Protein Added: BAF96538.1 nleB2 type III secretion system effector arginine glycosyltransferase NleB2
cstrittmatter@0	2967 Protein Added: BAF96541.1 nleA type III secretion system effector NleA
cstrittmatter@0	2968 Protein Added: BAA18405.1 acr3 arsenite efflux transporter Acr3
cstrittmatter@0	2969 Protein Added: BAA18407.1 arsC thioredoxin-dependent arsenate reductase
cstrittmatter@0	2970 Protein Added: AAL26283.1 saa autoagglutinating adhesin Saa
cstrittmatter@0	2971 Protein Added: CAA65654.1 espB type III secretion system LEE translocon pore-forming subunit EspB
cstrittmatter@0	2972 Protein Added: AAC45964.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	2973 Protein Added: AAC45965.1 stx2Be Shiga toxin Stx2e subunit B
cstrittmatter@0	2974 Protein Added: ACA34793.1 tsh temperature-sensitive protease autotransporter hemagglutinin Tsh
cstrittmatter@0	2975 Protein Added: BAG11995.1 tccP Tir-cytoskeleton coupling protein TccP
cstrittmatter@0	2976 Protein Added: BAG11997.1 tccP Tir-cytoskeleton coupling protein TccP
cstrittmatter@0	2977 Protein Added: BAG12001.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	2978 Protein Added: ACB16424.1 lpfA long polar fimbria major subunit LpfA-O113
cstrittmatter@0	2979 Protein Added: ACB16655.1 eilA HilA family transcriptional regulator EilA
cstrittmatter@0	2980 Protein Added: ACB17037.1 air inverse autotransporter adhesin EaeX/Air
cstrittmatter@0	2981 Protein Added: CAA70196.1 merT mercuric transport protein MerT
cstrittmatter@0	2982 Protein Added: ACB72721.1 faeG F4 fimbrial adhesin subunit FaeG
cstrittmatter@0	2983 Protein Added: AAC44731.1 espC serine protease autotransporter toxin EspC
cstrittmatter@0	2984 Protein Added: AAC74250.1 ymgB biofilm/acid-resistance regulator AriR
cstrittmatter@0	2985 Protein Added: AAC76298.1 acrF multidrug efflux RND transporter permease subunit AcrF
cstrittmatter@0	2986 Protein Added: AAC77293.1 mdtM multidrug efflux MFS transporter MdtM
cstrittmatter@0	2987 Protein Added: AAL57565.1 nleB type III secretion system effector arginine glycosyltransferase NleB
cstrittmatter@0	2988 Protein Added: BAB82994.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	2989 Protein Added: BAB82996.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	2990 Protein Added: BAB82998.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	2991 Protein Added: BAB83000.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	2992 Protein Added: BAB83002.1 stx2Ag Shiga toxin Stx2g subunit A
cstrittmatter@0	2993 Protein Added: BAB83003.1 stx2Bg Shiga toxin Stx2g subunit B
cstrittmatter@0	2994 Protein Added: BAB83005.1 stx2Bb Shiga toxin Stx2b subunit B
cstrittmatter@0	2995 Protein Added: BAB83007.1 stx2Bb Shiga toxin Stx2b subunit B
cstrittmatter@0	2996 Protein Added: BAB83020.1 stx2Ag Shiga toxin Stx2g subunit A
cstrittmatter@0	2997 Protein Added: BAB83022.1 stx1Ac Shiga toxin Stx1c subunit A
cstrittmatter@0	2998 Protein Added: BAB83023.1 stx1Bc Shiga toxin Stx1c subunit B
cstrittmatter@0	2999 Protein Added: BAB83024.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	3000 Protein Added: AAL72309.1 sepA serine protease autotransporter toxin SepA
cstrittmatter@0	3001 Protein Added: AAL72350.1 ipaD type III secretion system needle tip complex protein IpaD
cstrittmatter@0	3002 Protein Added: AAL05407.1 tcrB copper-translocating P-type ATPase TcrB
cstrittmatter@0	3003 Protein Added: ACD06066.1 capU putative hexosyltransferase CapU
cstrittmatter@0	3004 Protein Added: ACD06132.1 ipaD type III secretion system needle tip complex protein IpaD
cstrittmatter@0	3005 Protein Added: ACD07996.1 ipaH3 T3SS effector E3 ubiquitin-protein ligase IpaH3
cstrittmatter@0	3006 Protein Added: ACD09076.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
cstrittmatter@0	3007 Protein Added: BAA11821.1 chrR class I chromate reductase ChrR
cstrittmatter@0	3008 Protein Added: CAQ45062.1 emrC multidrug efflux transporter outer membrane subunit EmrC
cstrittmatter@0	3009 Protein Added: CAQ45063.1 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
cstrittmatter@0	3010 Protein Added: CAQ45064.1 emrB multidrug efflux MFS transporter permease subunit EmrB
cstrittmatter@0	3011 Protein Added: ACF05260.1 agg4A aggregative adherence fimbria 4 major subunit Agg4A/HdaA
cstrittmatter@0	3012 Protein Added: ACF30254.1 mtrR multidrug efflux system transcriptional repressor MtrR
cstrittmatter@0	3013 Protein Added: ACF30256.1 mtrF AbgT family antimetabolite efflux transporter MtrF
cstrittmatter@0	3014 Protein Added: BAG66379.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	3015 Protein Added: BAG66729.1 espB type III secretion system LEE translocon pore-forming subunit EspB
cstrittmatter@0	3016 Protein Added: BAG66736.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3017 Protein Added: ACG59623.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3018 Protein Added: ACG59674.1 espB type III secretion system LEE translocon pore-forming subunit EspB
cstrittmatter@0	3019 Protein Added: ACG59676.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3020 Protein Added: ACG59681.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3021 Protein Added: ACG59730.1 espB type III secretion system LEE translocon pore-forming subunit EspB
cstrittmatter@0	3022 Protein Added: ACG59732.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3023 Protein Added: ACG59737.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3024 Protein Added: ACG76368.1 arsP organoarsenical efflux permease ArsP
cstrittmatter@0	3025 Protein Added: ACI12150.1 terB tellurium resistance membrane protein TerB
cstrittmatter@0	3026 Protein Added: BAG76115.1 iss increased serum survival lipoprotein Iss
cstrittmatter@0	3027 Protein Added: AAA98099.1 stx1Aa Shiga toxin Stx1a subunit A
cstrittmatter@0	3028 Protein Added: CAS08589.1 nleB2 type III secretion system effector arginine glycosyltransferase NleB2
cstrittmatter@0	3029 Protein Added: CAS08990.1 nleA type III secretion system effector NleA
cstrittmatter@0	3030 Protein Added: CAS10463.1 espC serine protease autotransporter toxin EspC
cstrittmatter@0	3031 Protein Added: CAS06720.1 eae intimin type gamma
cstrittmatter@0	3032 Protein Added: CAS06721.1 eae intimin type alpha
cstrittmatter@0	3033 Protein Added: CAS06723.1 eae intimin type alpha
cstrittmatter@0	3034 Protein Added: BAA20334.1 merR mercury resistance transcriptional regulator MerR
cstrittmatter@0	3035 Protein Added: BAA20336.1 merP mercury resistance system periplasmic binding protein MerP
cstrittmatter@0	3036 Protein Added: BAA20337.1 merA mercury(II) reductase
cstrittmatter@0	3037 Protein Added: AAM70045.1 stx2Aa Shiga toxin Stx2a subunit A
cstrittmatter@0	3038 Protein Added: CAQ87187.1 iroN siderophore salmochelin receptor IroN
cstrittmatter@0	3039 Protein Added: CAV00478.1 lpfA long polar fimbria major subunit LpfA
cstrittmatter@0	3040 Protein Added: CAV00812.1 lpfA long polar fimbria major subunit LpfA-O113
cstrittmatter@0	3041 Protein Added: CAV02025.1 capU putative hexosyltransferase CapU
cstrittmatter@0	3042 Protein Added: CAQ90194.1 iss increased serum survival lipoprotein Iss
cstrittmatter@0	3043 Protein Added: CAU95796.1 aatA dispersin export ABC transporter outer membrane protein AatA
cstrittmatter@0	3044 Protein Added: CAU95824.1 agg3D aggregative adherence fimbria 3 chaperone Agg3D
cstrittmatter@0	3045 Protein Added: CAQ97644.1 iss increased serum survival lipoprotein Iss
cstrittmatter@0	3046 Protein Added: CAR01635.1 vactox vacuolating autotransporter toxin Vat
cstrittmatter@0	3047 Protein Added: CAR09703.2 ireA TonB-dependent siderophore receptor IreA
cstrittmatter@0	3048 Protein Added: CAR12622.1 iss increased serum survival lipoprotein Iss
cstrittmatter@0	3049 Protein Added: CAR15326.1 air inverse autotransporter adhesin EaeX/Air
cstrittmatter@0	3050 Protein Added: CAW30811.1 nfaE Dr family non-fimbrial adhesin I chaperone NfaE
cstrittmatter@0	3051 Protein Added: CAW30815.1 nfaE Dr family non-fimbrial adhesin I chaperone NfaE
cstrittmatter@0	3052 Protein Added: ACL13561.1 copR heavy metal response regulator transcription factor CopR
cstrittmatter@0	3053 Protein Added: ACL13562.1 copS copper resistance membrane spanning protein CopS
cstrittmatter@0	3054 Protein Added: ACL51961.1 ehxA enterohemolysin
cstrittmatter@0	3055 Protein Added: ACL51990.1 toxB toxin B
cstrittmatter@0	3056 Protein Added: AAM88296.1 agg3C aggregative adherence fimbria 3 usher protein Agg3C
cstrittmatter@0	3057 Protein Added: AAM88297.1 agg3B aggregative adherence fimbria 3 minor subunit Agg3B
cstrittmatter@0	3058 Protein Added: AAM88298.1 agg3A aggregative adherence fimbria 3 major subunit Agg3A
cstrittmatter@0	3059 Protein Added: AAM88299.1 astA heat-stable enterotoxin EAST1
cstrittmatter@0	3060 Protein Added: AAM88302.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3061 Protein Added: BAA14138.2 merC organomercurial transporter MerC
cstrittmatter@0	3062 Protein Added: AAM88668.1 cueA copper resistance metal-translocating P1-type ATPase CueA
cstrittmatter@0	3063 Protein Added: AAM90978.1 stx2Ba Shiga toxin Stx2a subunit B
cstrittmatter@0	3064 Protein Added: CAX18553.1 nleB type III secretion system effector arginine glycosyltransferase NleB
cstrittmatter@0	3065 Protein Added: CAX18626.1 nleB type III secretion system effector arginine glycosyltransferase NleB
cstrittmatter@0	3066 Protein Added: CAX18635.1 espF type III secretion system LEE effector EspF
cstrittmatter@0	3067 Protein Added: CAX18641.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3068 Protein Added: CAX18646.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3069 Protein Added: CAX18721.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3070 Protein Added: CAX18726.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3071 Protein Added: ACM67143.1 eae intimin type alpha
cstrittmatter@0	3072 Protein Added: ACM67145.1 eae intimin type iota
cstrittmatter@0	3073 Protein Added: ACM67146.1 eae intimin type alpha
cstrittmatter@0	3074 Protein Added: ACM67148.1 eae intimin type gamma
cstrittmatter@0	3075 Protein Added: ACM67149.1 eae intimin type gamma
cstrittmatter@0	3076 Protein Added: ACM67152.1 eae intimin type beta
cstrittmatter@0	3077 Protein Added: ACM67153.1 eae intimin type lambda
cstrittmatter@0	3078 Protein Added: ACM67154.1 eae intimin type gamma
cstrittmatter@0	3079 Protein Added: ACM67155.1 eae intimin type epsilon
cstrittmatter@0	3080 Protein Added: ACM67156.1 eae intimin type epsilon
cstrittmatter@0	3081 Protein Added: ACM67157.1 eae intimin type beta
cstrittmatter@0	3082 Protein Added: ACM67158.1 eae intimin type epsilon
cstrittmatter@0	3083 Protein Added: ACM67160.1 eae intimin type beta
cstrittmatter@0	3084 Protein Added: ACM67161.1 eae intimin type beta
cstrittmatter@0	3085 Protein Added: ACM67162.1 eae intimin type gamma
cstrittmatter@0	3086 Protein Added: ACM67163.1 eae intimin type rho
cstrittmatter@0	3087 Protein Added: ACM67164.1 eae intimin type gamma
cstrittmatter@0	3088 Protein Added: ACM67165.1 eae intimin type gamma
cstrittmatter@0	3089 Protein Added: ACM67166.1 eae intimin type gamma
cstrittmatter@0	3090 Protein Added: ACM67167.1 eae intimin type epsilon
cstrittmatter@0	3091 Protein Added: ACM67168.1 eae intimin type alpha
cstrittmatter@0	3092 Protein Added: ACM67169.1 eae intimin type gamma
cstrittmatter@0	3093 Protein Added: ACM67172.1 eae intimin type epsilon
cstrittmatter@0	3094 Protein Added: ACM67177.1 eae intimin type gamma
cstrittmatter@0	3095 Protein Added: ACM67178.1 eae intimin type epsilon
cstrittmatter@0	3096 Protein Added: BAH24012.1 toxB toxin B
cstrittmatter@0	3097 Protein Added: CAB14520.2 acr3 arsenite efflux transporter Acr3
cstrittmatter@0	3098 Protein Added: ACO06752.1 emhB efflux RND transporter permease subunit EmhB
cstrittmatter@0	3099 Protein Added: AAN03785.1 cnf1 cytotoxic necrotizing factor CNF1
cstrittmatter@0	3100 Protein Added: AAN03786.1 cnf1 cytotoxic necrotizing factor CNF1
cstrittmatter@0	3101 Protein Added: AAN04250.1 dpsA non-specific DNA-binding protein DpsA
cstrittmatter@0	3102 Protein Added: BAC10987.1 stx1Ac Shiga toxin Stx1c subunit A
cstrittmatter@0	3103 Protein Added: BAC10988.1 stx1Bc Shiga toxin Stx1c subunit B
cstrittmatter@0	3104 Protein Added: BAC10992.1 stx1Bc Shiga toxin Stx1c subunit B
cstrittmatter@0	3105 Protein Added: CAY54182.1 bfpA bundle-forming pilus major subunit BfpA
cstrittmatter@0	3106 Protein Added: AAN29240.1 bepD multidrug efflux RND transporter periplasmic adaptor subunit BepD
cstrittmatter@0	3107 Protein Added: AAN29241.1 bepE multidrug efflux RND transporter permease subunit BepE
cstrittmatter@0	3108 Protein Added: AAN29871.1 bepC multidrug efflux RND transporter outer membrane subunit BepC
cstrittmatter@0	3109 Protein Added: AAN33534.1 bepG multidrug efflux RND transporter permease subunit BepG
cstrittmatter@0	3110 Protein Added: AAN33535.1 bepF multidrug efflux RND transporter periplasmic adaptor subunit BepF
cstrittmatter@0	3111 Protein Added: CAD48850.1 cdtB cytolethal distending toxin type III/V nuclease subunit CdtB
cstrittmatter@0	3112 Protein Added: CAC86907.1 merB organomercurial lyase MerB
cstrittmatter@0	3113 Protein Added: BAH65949.1 iroN siderophore salmochelin receptor IroN
cstrittmatter@0	3114 Protein Added: BAH72965.1 cdtB cytolethal distending toxin type II nuclease subunit CdtB
cstrittmatter@0	3115 Protein Added: AAN42986.1 ipaH3 T3SS effector E3 ubiquitin-protein ligase IpaH3
cstrittmatter@0	3116 Protein Added: AAN43435.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
cstrittmatter@0	3117 Protein Added: AAN44449.1 sigA serine protease autotransporter toxin SigA
cstrittmatter@0	3118 Protein Added: CAQ68302.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3119 Protein Added: ACS88189.1 ipaD type III secretion system needle tip complex protein IpaD
cstrittmatter@0	3120 Protein Added: AAC45719.1 f17a F17A fimbrial adhesin
cstrittmatter@0	3121 Protein Added: AAC45722.1 f17g F17G fimbrial adhesin
cstrittmatter@0	3122 Protein Added: AAN68576.1 mrdH Ni(II)/Co(II) efflux transporter permease subunit MrdH
cstrittmatter@0	3123 Protein Added: AAN68577.1 mreA metal-sensing transcriptional repressor MreA
cstrittmatter@0	3124 Protein Added: ACT33468.1 f17a F17A fimbrial adhesin
cstrittmatter@0	3125 Protein Added: ACT33471.1 f17g F17G fimbrial adhesin
cstrittmatter@0	3126 Protein Added: ACT72391.1 tccP Tir-cytoskeleton coupling protein TccP
cstrittmatter@0	3127 Protein Added: CAR47993.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3128 Protein Added: CAR48009.1 nleB type III secretion system effector arginine glycosyltransferase NleB
cstrittmatter@0	3129 Protein Added: BAH86759.1 stx2Af Shiga toxin Stx2f subunit A
cstrittmatter@0	3130 Protein Added: BAH86760.1 stx2Bf Shiga toxin Stx2f subunit B
cstrittmatter@0	3131 Protein Added: BAA20338.2 merB organomercurial lyase MerB
cstrittmatter@0	3132 Protein Added: ACU32684.1 stx2Aa Shiga toxin Stx2a subunit A
cstrittmatter@0	3133 Protein Added: ACU65296.1 merA mercury(II) reductase
cstrittmatter@0	3134 Protein Added: CAX45702.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	3135 Protein Added: CAX45706.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3136 Protein Added: CAX45714.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	3137 Protein Added: CAX45718.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	3138 Protein Added: CAX45737.1 stx2Bd Shiga toxin Stx2d subunit B
cstrittmatter@0	3139 Protein Added: CAX45739.1 stx2Ba Shiga toxin Stx2a subunit B
cstrittmatter@0	3140 Protein Added: CAX45746.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3141 Protein Added: CAX51714.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	3142 Protein Added: AAB82330.1 aafA aggregative adherence fimbria II major subunit AafA
cstrittmatter@0	3143 Protein Added: BAI25473.1 nleC type III secretion system effector zinc metalloprotease NleC
cstrittmatter@0	3144 Protein Added: BAI31154.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	3145 Protein Added: BAI32292.1 nleB type III secretion system effector arginine glycosyltransferase NleB
cstrittmatter@0	3146 Protein Added: BAI32327.1 espB type III secretion system LEE translocon pore-forming subunit EspB
cstrittmatter@0	3147 Protein Added: BAI32516.1 espI serine protease autotransporter EspI
cstrittmatter@0	3148 Protein Added: BAI33940.1 etpD variant type II secretion system secretin EtpD
cstrittmatter@0	3149 Protein Added: BAI36256.1 nleC type III secretion system effector zinc metalloprotease NleC
cstrittmatter@0	3150 Protein Added: BAI36790.1 nleA type III secretion system effector NleA
cstrittmatter@0	3151 Protein Added: BAI37513.1 nleB type III secretion system effector arginine glycosyltransferase NleB
cstrittmatter@0	3152 Protein Added: BAI37519.1 espF type III secretion system LEE effector EspF
cstrittmatter@0	3153 Protein Added: BAI37525.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3154 Protein Added: BAA23166.1 merG phenylmercury resistance protein MerG
cstrittmatter@0	3155 Protein Added: AAN76093.1 iroN siderophore salmochelin receptor IroN
cstrittmatter@0	3156 Protein Added: AAN77057.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3157 Protein Added: AAN77061.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3158 Protein Added: AAN77063.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3159 Protein Added: BAI44131.1 agg5A aggregative adherence fimbria V major subunit Agg5A
cstrittmatter@0	3160 Protein Added: AAD12176.1 srpB solvent efflux RND transporter permease subunit SrpB
cstrittmatter@0	3161 Protein Added: AAD12177.1 ttgI solvent efflux RND transporter outer membrane subunit SrpC
cstrittmatter@0	3162 Protein Added: AAD12178.1 srpA solvent efflux RND transporter periplasmic adaptor subunit SrpA
cstrittmatter@0	3163 Protein Added: AAN78874.1 vactox vacuolating autotransporter toxin Vat
cstrittmatter@0	3164 Protein Added: AAN79707.1 iroN siderophore salmochelin receptor IroN
cstrittmatter@0	3165 Protein Added: AAN80033.1 iss increased serum survival lipoprotein Iss
cstrittmatter@0	3166 Protein Added: AAN83596.1 ireA TonB-dependent siderophore receptor IreA
cstrittmatter@0	3167 Protein Added: CAB14519.1 arsC thioredoxin-dependent arsenate reductase
cstrittmatter@0	3168 Protein Added: AAB91079.1 copB copper-binding protein CopB
cstrittmatter@0	3169 Protein Added: CAA05105.1 copP copper-binding metallochaperone CopP
cstrittmatter@0	3170 Protein Added: AAB88410.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3171 Protein Added: EEZ94110.1 sdeA multidrug efflux RND transporter periplasmic adaptor subunit SdeA
cstrittmatter@0	3172 Protein Added: AAO17297.1 eatA serine protease autotransporter toxin EatA
cstrittmatter@0	3173 Protein Added: ADA73787.1 ipaH3 T3SS effector E3 ubiquitin-protein ligase IpaH3
cstrittmatter@0	3174 Protein Added: ADA76801.1 sepA serine protease autotransporter toxin SepA
cstrittmatter@0	3175 Protein Added: AAO19475.1 stx1Ad Shiga toxin Stx1d subunit A
cstrittmatter@0	3176 Protein Added: AAO19476.1 stx1Bd Shiga toxin Stx1d subunit B
cstrittmatter@0	3177 Protein Added: ADA79992.1 merT mercuric transport protein MerT
cstrittmatter@0	3178 Protein Added: CBG87859.1 nleB type III secretion system effector arginine glycosyltransferase NleB
cstrittmatter@0	3179 Protein Added: CBG89712.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3180 Protein Added: CAD66214.1 vactox vacuolating autotransporter toxin Vat
cstrittmatter@0	3181 Protein Added: ADB20445.1 toxB toxin B
cstrittmatter@0	3182 Protein Added: CBG36837.1 eilA HilA family transcriptional regulator EilA
cstrittmatter@0	3183 Protein Added: CBG36838.1 air inverse autotransporter adhesin EaeX/Air
cstrittmatter@0	3184 Protein Added: CBG37385.1 aaiC type VI secretion system protein AaiC/Hcp2
cstrittmatter@0	3185 Protein Added: CBG27762.1 aatA dispersin export ABC transporter outer membrane protein AatA
cstrittmatter@0	3186 Protein Added: CBG27784.1 aafB aggregative adherence fimbria II minor subunit AafB
cstrittmatter@0	3187 Protein Added: CBG27798.1 aafD aggregative adherence fimbria II chaperone AafD
cstrittmatter@0	3188 Protein Added: CBG27800.1 aafA aggregative adherence fimbria II major subunit AafA
cstrittmatter@0	3189 Protein Added: CBG27804.1 aggR aggregative adherence transcriptional regulator AggR
cstrittmatter@0	3190 Protein Added: CBG27807.1 aap dispersin Aap
cstrittmatter@0	3191 Protein Added: CBG27812.1 aar AggR-activated transcriptional regulator Aar
cstrittmatter@0	3192 Protein Added: AAD12174.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	3193 Protein Added: AAO49780.1 ttgD toluene efflux RND transporter periplasmic adaptor subunit TtgD
cstrittmatter@0	3194 Protein Added: AAC38390.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3195 Protein Added: AAC38394.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3196 Protein Added: AAC38400.1 espF type III secretion system LEE effector EspF
cstrittmatter@0	3197 Protein Added: BAA24822.1 arsA arsenite efflux transporter ATPase subunit ArsA
cstrittmatter@0	3198 Protein Added: AAA20885.1 astA heat-stable enterotoxin EAST1
cstrittmatter@0	3199 Protein Added: AAA23736.1 f17g F17G fimbrial adhesin
cstrittmatter@0	3200 Protein Added: AAA23737.1 f17a F17A fimbrial adhesin
cstrittmatter@0	3201 Protein Added: ADD58872.1 espF type III secretion system LEE effector EspF
cstrittmatter@0	3202 Protein Added: ADD58881.1 eae intimin type gamma
cstrittmatter@0	3203 Protein Added: ADD58883.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3204 Protein Added: EFF39147.1 norM sodium-coupled multidrug efflux MATE transporter NorM
cstrittmatter@0	3205 Protein Added: AAO66617.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3206 Protein Added: BAJ04486.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	3207 Protein Added: BAJ04488.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	3208 Protein Added: AAC38219.1 merP mercury resistance system periplasmic binding protein MerP
cstrittmatter@0	3209 Protein Added: AAC38220.1 merA mercury(II) reductase
cstrittmatter@0	3210 Protein Added: AAC38221.1 merD mercury resistance co-regulator MerD
cstrittmatter@0	3211 Protein Added: ADE90928.1 vactox vacuolating autotransporter toxin Vat
cstrittmatter@0	3212 Protein Added: AAC38229.1 merR mercury resistance transcriptional regulator MerR
cstrittmatter@0	3213 Protein Added: AAC38230.1 merB organomercurial lyase MerB
cstrittmatter@0	3214 Protein Added: AAC38231.1 merT mercuric transport protein MerT
cstrittmatter@0	3215 Protein Added: AAC38232.1 merP mercury resistance system periplasmic binding protein MerP
cstrittmatter@0	3216 Protein Added: AAC38233.1 merC organomercurial transporter MerC
cstrittmatter@0	3217 Protein Added: AAC38236.1 merE broad-spectrum mercury transporter MerE
cstrittmatter@0	3218 Protein Added: ADF64798.1 ncrC Ni(II)/Co(II) efflux transporter permease subunit NcrC
cstrittmatter@0	3219 Protein Added: CBK85583.1 iroN siderophore salmochelin receptor IroN
cstrittmatter@0	3220 Protein Added: CBL93318.1 capU putative hexosyltransferase CapU
cstrittmatter@0	3221 Protein Added: CBL93506.1 lngA type IV pilus longus major pilin
cstrittmatter@0	3222 Protein Added: ADI59685.1 astA heat-stable enterotoxin EAST1
cstrittmatter@0	3223 Protein Added: ADI95409.1 ttgE multidrug efflux RND transporter permease subunit TtgE
cstrittmatter@0	3224 Protein Added: ADI95411.1 ttgT efflux transport transcriptional regulator TtgT
cstrittmatter@0	3225 Protein Added: AAP03990.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	3226 Protein Added: AAP18950.1 lpfA long polar fimbria major subunit LpfA-O113
cstrittmatter@0	3227 Protein Added: ADK23698.1 qacR multidrug-binding transcriptional regulator QacR
cstrittmatter@0	3228 Protein Added: ADK73987.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3229 Protein Added: AAM22256.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3230 Protein Added: AAM22257.1 stx2Bd Shiga toxin Stx2d subunit B
cstrittmatter@0	3231 Protein Added: CAD56174.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	3232 Protein Added: CAD56186.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	3233 Protein Added: AAA16360.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	3234 Protein Added: AAA16361.1 stx2Bb Shiga toxin Stx2b subunit B
cstrittmatter@0	3235 Protein Added: AAA16362.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3236 Protein Added: ADM83435.1 nleA type III secretion system effector NleA
cstrittmatter@0	3237 Protein Added: ADN71659.1 iss increased serum survival lipoprotein Iss
cstrittmatter@0	3238 Protein Added: AAP37403.1 stx2Ag Shiga toxin Stx2g subunit A
cstrittmatter@0	3239 Protein Added: AAC26634.1 pet serine protease autotransporter toxin Pet
cstrittmatter@0	3240 Protein Added: CBJ04488.1 cfaC CFA/I pilus usher protein CfaC
cstrittmatter@0	3241 Protein Added: AAC15683.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3242 Protein Added: ADO96486.1 hmrM sodium-coupled multidrug efflux MATE transporter HmrM
cstrittmatter@0	3243 Protein Added: ADP02162.1 merA mercury(II) reductase
cstrittmatter@0	3244 Protein Added: CAA73506.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3245 Protein Added: ADR26561.1 iss increased serum survival lipoprotein Iss
cstrittmatter@0	3246 Protein Added: ADR70747.1 copA laccase-like oxidase CopA
cstrittmatter@0	3247 Protein Added: ADR70748.1 copB copper-binding protein CopB
cstrittmatter@0	3248 Protein Added: BAC77251.1 sdeY multidrug efflux RND transporter permease subunit SdeY
cstrittmatter@0	3249 Protein Added: ADW66881.1 arsH arsenic resistance NADPH-dependent reductase ArsH
cstrittmatter@0	3250 Protein Added: AAP78989.1 ipaD type III secretion system needle tip complex protein IpaD
cstrittmatter@0	3251 Protein Added: BAC78639.1 stx1Aa Shiga toxin Stx1a subunit A
cstrittmatter@0	3252 Protein Added: BAC78640.1 stx1Ba Shiga toxin Stx1a subunit B
cstrittmatter@0	3253 Protein Added: AAC69314.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3254 Protein Added: AAC69318.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3255 Protein Added: BAJ79293.1 aafA aggregative adherence fimbria II major subunit AafA
cstrittmatter@0	3256 Protein Added: BAJ79295.1 aafA aggregative adherence fimbria II major subunit AafA
cstrittmatter@0	3257 Protein Added: BAJ79296.1 aafA aggregative adherence fimbria II major subunit AafA
cstrittmatter@0	3258 Protein Added: BAJ79297.1 aafA aggregative adherence fimbria II major subunit AafA
cstrittmatter@0	3259 Protein Added: BAJ79299.1 agg5A aggregative adherence fimbria V major subunit Agg5A
cstrittmatter@0	3260 Protein Added: BAJ79300.1 agg5A aggregative adherence fimbria V major subunit Agg5A
cstrittmatter@0	3261 Protein Added: ADY84088.1 nreB nickel resistance MFS transporter NreB
cstrittmatter@0	3262 Protein Added: AAC24352.1 ehxA enterohemolysin
cstrittmatter@0	3263 Protein Added: ADZ45128.1 ehxA enterohemolysin
cstrittmatter@0	3264 Protein Added: AAP88295.1 copA laccase-like oxidase CopA
cstrittmatter@0	3265 Protein Added: AEC46567.1 copA laccase-like oxidase CopA
cstrittmatter@0	3266 Protein Added: AEC46568.1 copB copper-binding protein CopB
cstrittmatter@0	3267 Protein Added: AAC38671.1 ttgB multidrug efflux RND transporter permease subunit TtgB
cstrittmatter@0	3268 Protein Added: BAA31774.1 ehxA enterohemolysin
cstrittmatter@0	3269 Protein Added: BAA31815.1 toxB toxin B
cstrittmatter@0	3270 Protein Added: BAA31832.1 katP catalase/peroxidase KatP
cstrittmatter@0	3271 Protein Added: BAA31836.1 espP serine protease autotransporter EspP
cstrittmatter@0	3272 Protein Added: AAQ17236.1 mco multi-copper oxidase Mco
cstrittmatter@0	3273 Protein Added: AAQ17546.1 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	3274 Protein Added: CAA74174.1 espB type III secretion system LEE translocon pore-forming subunit EspB
cstrittmatter@0	3275 Protein Added: AEG95593.1 iroN siderophore salmochelin receptor IroN
cstrittmatter@0	3276 Protein Added: AAQ20107.1 cfaC CFA/I pilus usher protein CfaC
cstrittmatter@0	3277 Protein Added: AEK01061.1 iroN siderophore salmochelin receptor IroN
cstrittmatter@0	3278 Protein Added: AAC31499.1 espB type III secretion system LEE translocon pore-forming subunit EspB
cstrittmatter@0	3279 Protein Added: AAY90617.2 emhA efflux RND transporter periplasmic adaptor subunit EmhA
cstrittmatter@0	3280 Protein Added: CAA12346.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3281 Protein Added: CAA12348.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3282 Protein Added: AEM17342.1 cdtB cytolethal distending toxin nuclease subunit CdtB
cstrittmatter@0	3283 Protein Added: AAC33154.1 lngA type IV pilus longus major pilin
cstrittmatter@0	3284 Protein Added: AEQ14997.1 eilA HilA family transcriptional regulator EilA
cstrittmatter@0	3285 Protein Added: AEQ15694.1 capU putative hexosyltransferase CapU
cstrittmatter@0	3286 Protein Added: AAC33908.1 merC organomercurial transporter MerC
cstrittmatter@0	3287 Protein Added: CCE21264.1 agg3A aggregative adherence fimbria 3 major subunit Agg3A
cstrittmatter@0	3288 Protein Added: EHE72460.1 pmrA multidrug efflux MFS transporter PmrA
cstrittmatter@0	3289 Protein Added: EHF16244.1 aatA dispersin export ABC transporter outer membrane protein AatA
cstrittmatter@0	3290 Protein Added: EHF16297.1 aggB aggregative adherence fimbria I minor subunit AggB
cstrittmatter@0	3291 Protein Added: EHF16298.1 aggA aggregative adherence fimbria I major subunit AggA
cstrittmatter@0	3292 Protein Added: AET11941.1 nleA type III secretion system effector NleA
cstrittmatter@0	3293 Protein Added: AET11995.1 nleA type III secretion system effector NleA
cstrittmatter@0	3294 Protein Added: AET12008.1 nleA type III secretion system effector NleA
cstrittmatter@0	3295 Protein Added: BAL46940.1 eae intimin type alpha
cstrittmatter@0	3296 Protein Added: BAL46941.1 eae intimin type epsilon
cstrittmatter@0	3297 Protein Added: BAL47132.1 eae intimin type epsilon
cstrittmatter@0	3298 Protein Added: BAL47176.1 eae intimin type rho
cstrittmatter@0	3299 Protein Added: BAL47179.1 eae intimin type epsilon
cstrittmatter@0	3300 Protein Added: BAL47181.1 eae intimin type alpha
cstrittmatter@0	3301 Protein Added: AEZ42789.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3302 Protein Added: AEZ43710.1 nleA type III secretion system effector NleA
cstrittmatter@0	3303 Protein Added: AAQ92182.1 emhC efflux RND transporter outer membrane subunit EmhC
cstrittmatter@0	3304 Protein Added: CAA77068.1 aggA aggregative adherence fimbria I major subunit AggA
cstrittmatter@0	3305 Protein Added: AAR02190.1 aggA aggregative adherence fimbria I major subunit AggA
cstrittmatter@0	3306 Protein Added: BAL72684.1 cdtB cytolethal distending toxin nuclease subunit CdtB
cstrittmatter@0	3307 Protein Added: BAL72697.1 cdtB cytolethal distending toxin nuclease subunit CdtB
cstrittmatter@0	3308 Protein Added: AAR12207.1 cdtB cytolethal distending toxin type III/V nuclease subunit CdtB
cstrittmatter@0	3309 Protein Added: AAC69584.1 ybtQ yersiniabactin ABC transporter ATP-binding/permease protein YbtQ
cstrittmatter@0	3310 Protein Added: AAR13270.1 iroN siderophore salmochelin receptor IroN
cstrittmatter@0	3311 Protein Added: AFH14350.1 faeG F4 fimbrial adhesin subunit FaeG
cstrittmatter@0	3312 Protein Added: CAD87828.1 sta1 heat-stable enterotoxin ST-I group a
cstrittmatter@0	3313 Protein Added: BAA34299.1 mexX multidrug efflux RND transporter periplasmic adaptor subunit MexX
cstrittmatter@0	3314 Protein Added: AFK88558.1 auto-sat serine protease autotransporter toxin Sat
cstrittmatter@0	3315 Protein Added: AFM31243.1 tccP Tir-cytoskeleton coupling protein TccP2
cstrittmatter@0	3316 Protein Added: AFM70729.1 copA copper-translocating P-type ATPase CopA
cstrittmatter@0	3317 Protein Added: AFM70730.1 copB copper/silver-translocating P-type ATPase CopB
cstrittmatter@0	3318 Protein Added: AAC82360.1 espB type III secretion system LEE translocon pore-forming subunit EspB
cstrittmatter@0	3319 Protein Added: AAR82963.1 nirA nickel resistance membrane nickel efflux protein NirA
cstrittmatter@0	3320 Protein Added: AAR82964.1 nirB nickel-sensing transcriptional repressor NirB
cstrittmatter@0	3321 Protein Added: AAR82966.1 nirD nickel resistance OB fold protein NirD
cstrittmatter@0	3322 Protein Added: AFQ65076.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	3323 Protein Added: CAA50007.1 cnf1 cytotoxic necrotizing factor CNF1
cstrittmatter@0	3324 Protein Added: CAA12345.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3325 Protein Added: CAA12350.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3326 Protein Added: CAA12351.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3327 Protein Added: AFS59871.1 sepA serine protease autotransporter toxin SepA
cstrittmatter@0	3328 Protein Added: AFS85685.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	3329 Protein Added: AAC99337.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3330 Protein Added: CAA21388.1 ybtP yersiniabactin ABC transporter ATP-binding/permease protein YbtP
cstrittmatter@0	3331 Protein Added: BAA36431.1 merR mercury resistance transcriptional regulator MerR
cstrittmatter@0	3332 Protein Added: BAA36433.1 merD mercury resistance co-regulator MerD
cstrittmatter@0	3333 Protein Added: CAA40744.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	3334 Protein Added: CAA23532.1 ltcA heat-labile enterotoxin LT subunit A
cstrittmatter@0	3335 Protein Added: CAA32535.1 fim41a fimbrial adhesin F41 protein Fim41a
cstrittmatter@0	3336 Protein Added: AAD05936.1 copP copper-binding metallochaperone CopP
cstrittmatter@0	3337 Protein Added: AAS07580.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3338 Protein Added: AAS07581.1 stx2Bc Shiga toxin Stx2c subunit B
cstrittmatter@0	3339 Protein Added: AAS07582.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3340 Protein Added: AAS07586.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3341 Protein Added: AAS07588.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3342 Protein Added: AAS07589.1 stx2Bd Shiga toxin Stx2d subunit B
cstrittmatter@0	3343 Protein Added: AAS07590.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3344 Protein Added: AAS07596.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3345 Protein Added: AAS07600.1 stx2Aa Shiga toxin Stx2a subunit A
cstrittmatter@0	3346 Protein Added: AAS07606.1 stx2Aa Shiga toxin Stx2a subunit A
cstrittmatter@0	3347 Protein Added: AAD11743.1 silE silver-binding protein SilE
cstrittmatter@0	3348 Protein Added: AAD11746.1 silC Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC
cstrittmatter@0	3349 Protein Added: AAD11748.1 silB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB
cstrittmatter@0	3350 Protein Added: AAD11749.1 silA Cu(+)/Ag(+) efflux RND transporter permease subunit SilA
cstrittmatter@0	3351 Protein Added: AAD11750.1 silP Ag(+)-translocating P-type ATPase SilP
cstrittmatter@0	3352 Protein Added: AFX83959.1 subA subtilase AB5 cytotoxin subunit A
cstrittmatter@0	3353 Protein Added: AAS21297.1 tbtR tribuytltin resistance regulator TbtR
cstrittmatter@0	3354 Protein Added: CAA43585.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3355 Protein Added: AAD15663.1 tbtA multidrug efflux RND transporter periplasmic adaptor subunit TbtA
cstrittmatter@0	3356 Protein Added: AAD15664.1 tbtB multidrug efflux RND transporter permease subunit TbtB
cstrittmatter@0	3357 Protein Added: AAD15665.1 tbtM multidrug efflux RND transporter outer membrane channel subunit TbtM
cstrittmatter@0	3358 Protein Added: AAD17509.1 f17a F17A fimbrial adhesin
cstrittmatter@0	3359 Protein Added: AAD17510.1 f17a F17A fimbrial adhesin
cstrittmatter@0	3360 Protein Added: AAD17511.1 f17a F17A fimbrial adhesin
cstrittmatter@0	3361 Protein Added: AAD17513.1 f17g F17G fimbrial adhesin
cstrittmatter@0	3362 Protein Added: AAD17514.1 f17g F17G fimbrial adhesin
cstrittmatter@0	3363 Protein Added: AAD17515.1 f17g F17G fimbrial adhesin
cstrittmatter@0	3364 Protein Added: AAA18786.1 cdtB cytolethal distending toxin type II nuclease subunit CdtB
cstrittmatter@0	3365 Protein Added: CAA77320.1 merR mercury resistance transcriptional regulator MerR
cstrittmatter@0	3366 Protein Added: CAA77324.1 merD mercury resistance co-regulator MerD
cstrittmatter@0	3367 Protein Added: CAA77325.1 merE broad-spectrum mercury transporter MerE
cstrittmatter@0	3368 Protein Added: CAA81047.1 mtrR multidrug efflux system transcriptional repressor MtrR
cstrittmatter@0	3369 Protein Added: AAA74436.1 mexA multidrug efflux RND transporter periplasmic adaptor subunit MexA
cstrittmatter@0	3370 Protein Added: AGC14252.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	3371 Protein Added: AAS47019.1 nleC type III secretion system effector zinc metalloprotease NleC
cstrittmatter@0	3372 Protein Added: AGC85979.1 iss increased serum survival lipoprotein Iss
cstrittmatter@0	3373 Protein Added: CCG33322.1 iroN siderophore salmochelin receptor IroN
cstrittmatter@0	3374 Protein Added: AAS50165.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	3375 Protein Added: AAO18187.2 sdeB multidrug efflux RND transporter permease subunit SdeB
cstrittmatter@0	3376 Protein Added: AAA98221.1 merR mercury resistance transcriptional regulator MerR
cstrittmatter@0	3377 Protein Added: AAS76847.1 fedA F18 fimbrial major subunit FedA
cstrittmatter@0	3378 Protein Added: AAD25959.1 merR2 mercury resistance transcriptional regulator MerR2
cstrittmatter@0	3379 Protein Added: AAA98245.1 merA mercury(II) reductase
cstrittmatter@0	3380 Protein Added: AAD27810.1 aafC aggregative adherence fimbria II usher protein AafC
cstrittmatter@0	3381 Protein Added: AAA24698.1 tsh temperature-sensitive protease autotransporter hemagglutinin Tsh
cstrittmatter@0	3382 Protein Added: CAE82650.1 faeG F4 fimbrial adhesin subunit FaeG
cstrittmatter@0	3383 Protein Added: CAE82653.1 faeG F4 fimbrial adhesin subunit FaeG
cstrittmatter@0	3384 Protein Added: CAE82670.1 faeG F4 fimbrial adhesin subunit FaeG
cstrittmatter@0	3385 Protein Added: AAD28079.1 hlyE hemolysin HlyE
cstrittmatter@0	3386 Protein Added: CAA83535.1 aggR aggregative adherence transcriptional regulator AggR
cstrittmatter@0	3387 Protein Added: EMS03085.1 aggA aggregative adherence fimbria I major subunit AggA
cstrittmatter@0	3388 Protein Added: CAE55775.1 auto-sat serine protease autotransporter toxin Sat
cstrittmatter@0	3389 Protein Added: AAT36311.1 rpeA serine protease autotransporter colonization factor RpeA
cstrittmatter@0	3390 Protein Added: BAA77749.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	3391 Protein Added: BAA77750.1 stx2Bb Shiga toxin Stx2b subunit B
cstrittmatter@0	3392 Protein Added: BAA77751.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	3393 Protein Added: CAA46767.1 stx2Ab Shiga toxin Stx2b subunit A
cstrittmatter@0	3394 Protein Added: CAA46768.1 stx2Bb Shiga toxin Stx2b subunit B
cstrittmatter@0	3395 Protein Added: CAA77936.1 emrE multidrug efflux SMR transporter EmrE
cstrittmatter@0	3396 Protein Added: AAT65972.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3397 Protein Added: AAT66000.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3398 Protein Added: AAT66010.1 stx2Aa Shiga toxin Stx2a subunit A
cstrittmatter@0	3399 Protein Added: AAT66011.1 stx2Ba Shiga toxin Stx2a subunit B
cstrittmatter@0	3400 Protein Added: AAT66012.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3401 Protein Added: AGL46515.1 merF mercury resistance system transport protein MerF
cstrittmatter@0	3402 Protein Added: AAT68784.1 subB subtilase AB5 cytotoxin subunit B
cstrittmatter@0	3403 Protein Added: AAT68785.1 subA subtilase AB5 cytotoxin subunit A
cstrittmatter@0	3404 Protein Added: AAT76975.1 lpfA long polar fimbria major subunit LpfA-O113
cstrittmatter@0	3405 Protein Added: AAD39553.1 ttgA toluene efflux RND transporter periplasmic adaptor subunit TtgA
cstrittmatter@0	3406 Protein Added: AAU01878.1 sepA serine protease autotransporter toxin SepA
cstrittmatter@0	3407 Protein Added: AAN38824.2 adeE multidrug efflux RND transporter permease subunit AdeE
cstrittmatter@0	3408 Protein Added: AAU10477.1 adeD multidrug efflux RND transporter periplasmic adaptor subunit AdeD
cstrittmatter@0	3409 Protein Added: AAU88208.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3410 Protein Added: AAU88264.1 cdtB cytolethal distending toxin nuclease subunit CdtB
cstrittmatter@0	3411 Protein Added: AAA57451.1 aggD aggregative adherence fimbria I chaperone AggD
cstrittmatter@0	3412 Protein Added: AAA57452.1 aggC aggregative adherence fimbria I usher protein AggC
cstrittmatter@0	3413 Protein Added: AAA57453.1 aggB aggregative adherence fimbria I minor subunit AggB
cstrittmatter@0	3414 Protein Added: AAA57454.1 aggA aggregative adherence fimbria I major subunit AggA
cstrittmatter@0	3415 Protein Added: CAA85366.1 stx1Aa Shiga toxin Stx1a subunit A
cstrittmatter@0	3416 Protein Added: CAA85368.1 stx1Aa Shiga toxin Stx1a subunit A
cstrittmatter@0	3417 Protein Added: CAA85370.1 stx1Ac Shiga toxin Stx1c subunit A
cstrittmatter@0	3418 Protein Added: CAA85371.1 stx1Bc Shiga toxin Stx1c subunit B
cstrittmatter@0	3419 Protein Added: EQX61716.1 aggA aggregative adherence fimbria I major subunit AggA
cstrittmatter@0	3420 Protein Added: AAU95470.1 nleB type III secretion system effector arginine glycosyltransferase NleB
cstrittmatter@0	3421 Protein Added: AAU95768.1 mepA multidrug efflux MATE transporter MepA
cstrittmatter@0	3422 Protein Added: CAG17536.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3423 Protein Added: CAG17541.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3424 Protein Added: AAD43578.1 astA heat-stable enterotoxin EAST1
cstrittmatter@0	3425 Protein Added: AAD43579.1 astA heat-stable enterotoxin EAST1
cstrittmatter@0	3426 Protein Added: CAA85780.1 stx2Aa Shiga toxin Stx2a subunit A
cstrittmatter@0	3427 Protein Added: AAA80193.1 mtrC multidrug efflux RND transporter periplasmic adaptor subunit MtrC
cstrittmatter@0	3428 Protein Added: AAD44693.1 mtrA efflux transporter MtrCDE transcriptional activator MtrA
cstrittmatter@0	3429 Protein Added: AAD47284.1 terZ tellurium resistance-associated protein TerZ
cstrittmatter@0	3430 Protein Added: AAW38464.1 lmrS multidrug efflux MFS transporter LmrS
cstrittmatter@0	3431 Protein Added: CAI43856.1 espF type III secretion system LEE effector EspF
cstrittmatter@0	3432 Protein Added: CAI43860.1 espB type III secretion system LEE translocon pore-forming subunit EspB
cstrittmatter@0	3433 Protein Added: CAI43862.1 espA type III secretion system LEE translocon filament protein EspA
cstrittmatter@0	3434 Protein Added: CAI43865.1 eae intimin type epsilon
cstrittmatter@0	3435 Protein Added: CAI43867.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3436 Protein Added: AAD54074.1 farB fatty acid resistance MFS efflux transporter permease subunit FarB
cstrittmatter@0	3437 Protein Added: BAA84838.1 bfpA bundle-forming pilus major subunit BfpA
cstrittmatter@0	3438 Protein Added: BAA84859.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	3439 Protein Added: AAT35241.2 tsh temperature-sensitive protease autotransporter hemagglutinin Tsh
cstrittmatter@0	3440 Protein Added: AAF03351.1 espF type III secretion system LEE effector EspF
cstrittmatter@0	3441 Protein Added: AHW84565.1 aaiC type VI secretion system protein AaiC/Hcp2
cstrittmatter@0	3442 Protein Added: AHW84567.1 aaiC type VI secretion system protein AaiC/Hcp2
cstrittmatter@0	3443 Protein Added: AAX47728.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3444 Protein Added: AAX47729.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3445 Protein Added: AAX47730.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3446 Protein Added: AAX47731.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3447 Protein Added: CAA58525.1 pcoA multicopper oxidase PcoA
cstrittmatter@0	3448 Protein Added: CAA58526.1 pcoB copper-binding protein PcoB
cstrittmatter@0	3449 Protein Added: CAA58527.1 pcoC copper resistance system metallochaperone PcoC
cstrittmatter@0	3450 Protein Added: CAA58528.1 pcoD copper resistance inner membrane protein PcoD
cstrittmatter@0	3451 Protein Added: CAA58529.1 pcoR copper response regulator transcription factor PcoR
cstrittmatter@0	3452 Protein Added: CAA58530.1 pcoS copper resistance membrane spanning protein PcoS
cstrittmatter@0	3453 Protein Added: CAA58532.1 pcoE copper resistance system metallochaperone PcoE
cstrittmatter@0	3454 Protein Added: AAX63244.1 fedF F18 fimbrial adhesin subunit FedF
cstrittmatter@0	3455 Protein Added: AAX63245.1 fedF F18 fimbrial adhesin subunit FedF
cstrittmatter@0	3456 Protein Added: AAX63259.1 fedF F18 fimbrial adhesin subunit FedF
cstrittmatter@0	3457 Protein Added: AAX63270.1 fedF F18 fimbrial adhesin subunit FedF
cstrittmatter@0	3458 Protein Added: AAY25390.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3459 Protein Added: AAY25394.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3460 Protein Added: AAY25395.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3461 Protein Added: AAF14522.1 mexX multidrug efflux RND transporter periplasmic adaptor subunit MexX
cstrittmatter@0	3462 Protein Added: CAI91198.1 stx2Ag Shiga toxin Stx2g subunit A
cstrittmatter@0	3463 Protein Added: AAF16681.1 srpS solvent efflux transporter transcriptional repressor SrpS
cstrittmatter@0	3464 Protein Added: AAF16682.1 srpR solvent efflux transporter antirepressor SrpR
cstrittmatter@0	3465 Protein Added: CAA54115.1 nfaE Dr family non-fimbrial adhesin I chaperone NfaE
cstrittmatter@0	3466 Protein Added: AAF23359.1 eae intimin type epsilon
cstrittmatter@0	3467 Protein Added: CAB64953.1 stx2Af Shiga toxin Stx2f subunit A
cstrittmatter@0	3468 Protein Added: AAY63864.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3469 Protein Added: AAY63865.1 stx2Bd Shiga toxin Stx2d subunit B
cstrittmatter@0	3470 Protein Added: CDY80020.1 hsp20 small heat shock protein sHSP20
cstrittmatter@0	3471 Protein Added: AAY90615.1 emhC efflux RND transporter outer membrane subunit EmhC
cstrittmatter@0	3472 Protein Added: KGL71342.1 silF Ag(+)/Cu(+) efflux RND transporter periplasmic metallochaperone SilF
cstrittmatter@0	3473 Protein Added: AAF40764.1 farB fatty acid resistance MFS efflux transporter permease subunit FarB
cstrittmatter@0	3474 Protein Added: AAF42063.1 mtrC multidrug efflux RND transporter periplasmic adaptor subunit MtrC
cstrittmatter@0	3475 Protein Added: AAB26855.2 nfaE Dr family non-fimbrial adhesin I chaperone NfaE
cstrittmatter@0	3476 Protein Added: CAB82448.1 cnrY nickel resistance system anti-sigma factor CnrY
cstrittmatter@0	3477 Protein Added: AAZ76497.1 ehxA enterohemolysin
cstrittmatter@0	3478 Protein Added: AAZ76514.1 espP serine protease autotransporter EspP
cstrittmatter@0	3479 Protein Added: AAZ76524.1 subA subtilase AB5 cytotoxin subunit A
cstrittmatter@0	3480 Protein Added: AAZ87985.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
cstrittmatter@0	3481 Protein Added: AAZ88030.1 ipaH3 T3SS effector E3 ubiquitin-protein ligase IpaH3
cstrittmatter@0	3482 Protein Added: AAZ89804.1 sigA serine protease autotransporter toxin SigA
cstrittmatter@0	3483 Protein Added: AAZ91108.1 ipaD type III secretion system needle tip complex protein IpaD
cstrittmatter@0	3484 Protein Added: ABA25986.1 merF mercury resistance system transport protein MerF
cstrittmatter@0	3485 Protein Added: AAX22079.2 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	3486 Protein Added: AAA65102.1 nccX periplasmic metal sensor NccX
cstrittmatter@0	3487 Protein Added: AAA65103.1 nccH nickel/cobalt/cadmium resistance ECF sigma factor NccH
cstrittmatter@0	3488 Protein Added: ABB16332.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3489 Protein Added: ABB36584.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3490 Protein Added: ABB36586.1 stx2Ad Shiga toxin Stx2d subunit A
cstrittmatter@0	3491 Protein Added: ABB61187.1 iroN siderophore salmochelin receptor IroN
cstrittmatter@0	3492 Protein Added: ABB62096.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
cstrittmatter@0	3493 Protein Added: ABB62098.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
cstrittmatter@0	3494 Protein Added: ABB64677.1 ipaD type III secretion system needle tip complex protein IpaD
cstrittmatter@0	3495 Protein Added: ABB65884.1 ipaH3 T3SS effector E3 ubiquitin-protein ligase IpaH3
cstrittmatter@0	3496 Protein Added: ABB66229.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
cstrittmatter@0	3497 Protein Added: ABB68924.1 virF AraC family invasion system transcriptional regulator VirF
cstrittmatter@0	3498 Protein Added: KLB41245.1 copL transcriptional regulator CopL
cstrittmatter@0	3499 Protein Added: CAI79539.1 eatA serine protease autotransporter toxin EatA
cstrittmatter@0	3500 Protein Added: CAJ44959.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
cstrittmatter@0	3501 Protein Added: CAB77169.2 stx2Ae Shiga toxin Stx2e subunit A
cstrittmatter@0	3502 Protein Added: CAB94149.1 stx2Ba Shiga toxin Stx2a subunit B
cstrittmatter@0	3503 Protein Added: AAC34727.1 faeG F4 fimbrial adhesin subunit FaeG
cstrittmatter@0	3504 Protein Added: BAA96815.1 tir type III secretion system LEE translocated intimin receptor Tir
cstrittmatter@0	3505 Protein Added: AAA69514.1 f17g F17G fimbrial adhesin
cstrittmatter@0	3506 Protein Added: CAA88252.1 sepA serine protease autotransporter toxin SepA
cstrittmatter@0	3507 Protein Added: BAE79899.1 smfY multidrug efflux MFS transporter SmfY
cstrittmatter@0	3508 Protein Added: ABE06598.1 sfaS S-fimbrial adhesin minor subunit SfaS
cstrittmatter@0	3509 Protein Added: ABE10324.1 cnf1 cytotoxic necrotizing factor CNF1
cstrittmatter@0	3510 Protein Added: CAJ34994.1 bfpA bundle-forming pilus major subunit BfpA
cstrittmatter@0	3511 Protein Added: ABF13034.1 merD mercury resistance co-regulator MerD
cstrittmatter@0	3512 Protein Added: ABF13067.1 cnrC nickel efflux RND transporter outer membrane subunit CnrC
cstrittmatter@0	3513 Protein Added: ABF13069.1 cnrA nickel efflux RND transporter permease subunit CnrA
cstrittmatter@0	3514 Protein Added: ABF13070.1 cnrT nickel diffusion facilitator CnrT
cstrittmatter@0	3515 Protein Added: ABF14406.1 ncrA Metal Resistance
cstrittmatter@0	3516 Protein Added: ABF14407.1 ncrB nickel-sensing transcriptional repressor NcrB
cstrittmatter@0	3517 Protein Added: CAK02719.1 cnf1 cytotoxic necrotizing factor CNF1
cstrittmatter@0	3518 Protein Added: CAA90630.1 stx2Aa Shiga toxin Stx2a subunit A
cstrittmatter@0	3519 Protein Added: BAT41861.1 eae intimin type alpha
cstrittmatter@0	3520 Protein Added: CAK15125.1 mexE MexE family multidrug efflux RND transporter periplasmic adaptor subunit
cstrittmatter@0	3521 Protein Added: AAG01033.1 stx2Ac Shiga toxin Stx2c subunit A
cstrittmatter@0	3522 Protein Added: AAB59153.1 cadC Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC
cstrittmatter@0	3523 Protein Added: ABF61434.1 ncrA Metal Resistance
cstrittmatter@0	3524 Protein Added: ABF61435.1 ncrB nickel-sensing transcriptional repressor NcrB
cstrittmatter@0	3525 Protein Added: ABF61437.1 ncrY nickel resistance OB fold protein NcrY
cstrittmatter@0	3526 Protein Added: AAG05881.1 mexE MexE family multidrug efflux RND transporter periplasmic adaptor subunit
cstrittmatter@0	3527 Protein Added: AAG10695.1 perA BFP system transcriptional regulator PerA
cstrittmatter@0	3528 Protein Added: WP_000697899.1 pmrA pmrA
cstrittmatter@0	3529 Protein Added: WP_097509477.1 acrB acrB
cstrittmatter@0	3530
cstrittmatter@0	3531 - AMRFinder HMM library Changes:
cstrittmatter@0	3532 Prev. Release: 574
cstrittmatter@0	3533 This Release: 610
cstrittmatter@0	3534 Removed: 2
cstrittmatter@0	3535 Added: 38
cstrittmatter@0	3536 Changed: 572
cstrittmatter@0	3537 HMM Removed: NF000478.2 linco_LnuE
cstrittmatter@0	3538 HMM Removed: NF012180.1 tet_MFS_43
cstrittmatter@0	3539 HMM Added: NF000131.1 MATE_multi_MepA
cstrittmatter@0	3540 HMM Added: NF000249.1 MexE
cstrittmatter@0	3541 HMM Added: NF000252.1 MexX
cstrittmatter@0	3542 HMM Added: NF000263.1 MATE_multi_NorM
cstrittmatter@0	3543 HMM Added: NF000282.2 RND_permease_1
cstrittmatter@0	3544 HMM Added: NF000314.1 adeB
cstrittmatter@0	3545 HMM Added: NF000315.1 adeC-adeK-oprM
cstrittmatter@0	3546 HMM Added: NF000336.1 emrE
cstrittmatter@0	3547 HMM Added: NF007842.1 PRK10555.1
cstrittmatter@0	3548 HMM Added: NF010310.2 PRK13747.1
cstrittmatter@0	3549 HMM Added: NF010315.0 PRK13752.1
cstrittmatter@0	3550 HMM Added: NF011706.2 PRK15127.1
cstrittmatter@0	3551 HMM Added: NF028537.1 P_eth_NH2_trans
cstrittmatter@0	3552 HMM Added: NF033086.2 penta_rpt_Qnr
cstrittmatter@0	3553 HMM Added: NF033134.0 cmlA_floR
cstrittmatter@0	3554 HMM Added: NF033142.1 efflux_OM_AdeC
cstrittmatter@0	3555 HMM Added: NF033143.1 efflux_OM_AdeK
cstrittmatter@0	3556 HMM Added: NF033555.1 lyase_MerB
cstrittmatter@0	3557 HMM Added: NF033560.1 merT_RC607
cstrittmatter@0	3558 HMM Added: NF033565.0 trans_MerF
cstrittmatter@0	3559 HMM Added: NF033627.3 intimin_all
cstrittmatter@0	3560 HMM Added: NF033637.1 transloc_TIR
cstrittmatter@0	3561 HMM Added: NF033639.1 intimin_alpha
cstrittmatter@0	3562 HMM Added: NF033643.1 EspJ_gen
cstrittmatter@0	3563 HMM Added: NF033646.1 toxin_EAST1
cstrittmatter@0	3564 HMM Added: NF033651.1 cyto_nec_fctrs
cstrittmatter@0	3565 HMM Added: NF033658.1 Shiga_Stx1A
cstrittmatter@0	3566 HMM Added: NF033659.0 Shiga_Stx1B
cstrittmatter@0	3567 HMM Added: NF033660.0 Shiga_Stx2B
cstrittmatter@0	3568 HMM Added: NF033661.1 Shiga_Stx2A
cstrittmatter@0	3569 HMM Added: NF033727.1 chaperon_ArsD
cstrittmatter@0	3570 HMM Added: NF033781.1 chaper_CopP
cstrittmatter@0	3571 HMM Added: NF033783.1 coreg_MerD
cstrittmatter@0	3572 HMM Added: NF033784.1 transport_merC
cstrittmatter@0	3573 HMM Added: NF033786.1 phenyl_MerG
cstrittmatter@0	3574 HMM Added: NF033834.1 RND_adapt_MexA
cstrittmatter@0	3575 HMM Added: TIGR02052.1 TIGR02052
cstrittmatter@0	3576 HMM Added: TIGR02053.1 TIGR02053
cstrittmatter@0	3577 ---------------------------------------------------------------------
cstrittmatter@0	3578 Changes included in 2019-04-29.1
cstrittmatter@0	3579 ---------------------------------------------------------------------
cstrittmatter@0	3580
cstrittmatter@0	3581 Summary: In addition to the usual addition of 134 new genes and alleles
cstrittmatter@0	3582 community feedback led to the renaming of a few dfr genes. The family
cstrittmatter@0	3583 heirarchy file (fam.tab) was cleaned up by removing a number of superfluous
cstrittmatter@0	3584 entries.
cstrittmatter@0	3585
cstrittmatter@0	3586 Changes included in 2019-04-29.1
cstrittmatter@0	3587 - Protein changes:
cstrittmatter@0	3588 Prev. Release: 4810
cstrittmatter@0	3589 This Release: 4942
cstrittmatter@0	3590 Removed: 1
cstrittmatter@0	3591 Added: 134
cstrittmatter@0	3592 Modified: 3
cstrittmatter@0	3593 Protein Removed: WP_109545040.1 chrB
cstrittmatter@0	3594 Protein Added: WP_000054744.1 satA_Ba
cstrittmatter@0	3595 Protein Added: WP_001211209.1 blaADC-140
cstrittmatter@0	3596 Protein Added: WP_001211210.1 blaADC-185
cstrittmatter@0	3597 Protein Added: WP_001211214.1 blaADC-144
cstrittmatter@0	3598 Protein Added: WP_001211215.1 blaADC-115
cstrittmatter@0	3599 Protein Added: WP_001572373.1 mcr-9.1
cstrittmatter@0	3600 Protein Added: WP_002126587.1 blaADC-120
cstrittmatter@0	3601 Protein Added: WP_002157727.1 blaADC-117
cstrittmatter@0	3602 Protein Added: WP_003112187.1 blaADC-191
cstrittmatter@0	3603 Protein Added: WP_003242546.1 satA_Bs
cstrittmatter@0	3604 Protein Added: WP_004643536.1 blaADC-128
cstrittmatter@0	3605 Protein Added: WP_004700205.1 blaADC-133
cstrittmatter@0	3606 Protein Added: WP_004707701.1 blaADC-131
cstrittmatter@0	3607 Protein Added: WP_004712857.1 blaADC-119
cstrittmatter@0	3608 Protein Added: WP_004790939.1 blaADC-135
cstrittmatter@0	3609 Protein Added: WP_004840559.1 blaADC-123
cstrittmatter@0	3610 Protein Added: WP_004886093.1 blaADC-130
cstrittmatter@0	3611 Protein Added: WP_005039111.1 blaADC-129
cstrittmatter@0	3612 Protein Added: WP_005046018.1 blaADC-127
cstrittmatter@0	3613 Protein Added: WP_005068074.1 blaADC-132
cstrittmatter@0	3614 Protein Added: WP_005109685.1 blaADC-121
cstrittmatter@0	3615 Protein Added: WP_005123276.1 blaADC-122
cstrittmatter@0	3616 Protein Added: WP_005131186.1 blaADC-125
cstrittmatter@0	3617 Protein Added: WP_005307218.1 blaADC-134
cstrittmatter@0	3618 Protein Added: WP_005404206.1 blaOXA-813
cstrittmatter@0	3619 Protein Added: WP_005405613.1 blaOXA-814
cstrittmatter@0	3620 Protein Added: WP_013197184.1 blaADC-193
cstrittmatter@0	3621 Protein Added: WP_014207272.1 blaADC-149
cstrittmatter@0	3622 Protein Added: WP_016137488.1 blaADC-136
cstrittmatter@0	3623 Protein Added: WP_016140427.1 blaADC-137
cstrittmatter@0	3624 Protein Added: WP_016146025.1 blaADC-138
cstrittmatter@0	3625 Protein Added: WP_017386568.1 blaADC-150
cstrittmatter@0	3626 Protein Added: WP_017778762.1 mcr-3.27
cstrittmatter@0	3627 Protein Added: WP_017816757.1 blaADC-116
cstrittmatter@0	3628 Protein Added: WP_026382828.1 blaOXA-114i
cstrittmatter@0	3629 Protein Added: WP_026444036.1 blaOXA-816
cstrittmatter@0	3630 Protein Added: WP_032039838.1 blaADC-139
cstrittmatter@0	3631 Protein Added: WP_032053762.1 blaOXA-819
cstrittmatter@0	3632 Protein Added: WP_032057042.1 blaOXA-820
cstrittmatter@0	3633 Protein Added: WP_032062810.1 blaADC-141
cstrittmatter@0	3634 Protein Added: WP_032625176.1 blaACT-66
cstrittmatter@0	3635 Protein Added: WP_033502167.1 blaADC-143
cstrittmatter@0	3636 Protein Added: WP_034670108.1 blaOXA-818
cstrittmatter@0	3637 Protein Added: WP_034688190.1 blaOXA-812
cstrittmatter@0	3638 Protein Added: WP_036299413.1 sulR
cstrittmatter@0	3639 Protein Added: WP_039246976.1 blaADC-148
cstrittmatter@0	3640 Protein Added: WP_039258389.1 blaADC-146
cstrittmatter@0	3641 Protein Added: WP_039270258.1 blaADC-145
cstrittmatter@0	3642 Protein Added: WP_044718369.1 blaADC-147
cstrittmatter@0	3643 Protein Added: WP_047726486.1 blaACT-65
cstrittmatter@0	3644 Protein Added: WP_053498400.1 blaOXA-114h
cstrittmatter@0	3645 Protein Added: WP_054437016.1 blaOXA-114j
cstrittmatter@0	3646 Protein Added: WP_054471662.1 blaOXA-114m
cstrittmatter@0	3647 Protein Added: WP_054500785.1 blaOXA-789
cstrittmatter@0	3648 Protein Added: WP_054517040.1 blaOXA-114l
cstrittmatter@0	3649 Protein Added: WP_057061999.1 blaOXA-821
cstrittmatter@0	3650 Protein Added: WP_059247009.1 blaADC-184
cstrittmatter@0	3651 Protein Added: WP_063099318.1 blaADC-151
cstrittmatter@0	3652 Protein Added: WP_063147148.1 blaACT-67
cstrittmatter@0	3653 Protein Added: WP_072292271.1 blaADC-186
cstrittmatter@0	3654 Protein Added: WP_075040046.1 blaOXA-817
cstrittmatter@0	3655 Protein Added: WP_076412384.1 blaOXA-114p
cstrittmatter@0	3656 Protein Added: WP_099595307.1 dfrA35
cstrittmatter@0	3657 Protein Added: WP_103663397.1 sulX
cstrittmatter@0	3658 Protein Added: WP_106743337.1 mcr-1.18
cstrittmatter@0	3659 Protein Added: WP_109545052.1 mcr-1.14
cstrittmatter@0	3660 Protein Added: WP_110612827.1 blaOXA-796
cstrittmatter@0	3661 Protein Added: WP_111280830.1 blaOXA-815
cstrittmatter@0	3662 Protein Added: WP_115470049.1 blaKPC-40
cstrittmatter@0	3663 Protein Added: WP_117664257.1 cfxA6
cstrittmatter@0	3664 Protein Added: WP_125052776.1 blaADC-114
cstrittmatter@0	3665 Protein Added: WP_136512051.1 blaACT-68
cstrittmatter@0	3666 Protein Added: WP_136512052.1 blaADC-109
cstrittmatter@0	3667 Protein Added: WP_136512053.1 blaADC-110
cstrittmatter@0	3668 Protein Added: WP_136512054.1 blaADC-112
cstrittmatter@0	3669 Protein Added: WP_136512055.1 blaADC-113
cstrittmatter@0	3670 Protein Added: WP_136512056.1 blaADC-187
cstrittmatter@0	3671 Protein Added: WP_136512057.1 blaADC-188
cstrittmatter@0	3672 Protein Added: WP_136512058.1 blaADC-189
cstrittmatter@0	3673 Protein Added: WP_136512059.1 blaADC-190
cstrittmatter@0	3674 Protein Added: WP_136512060.1 blaADC-192
cstrittmatter@0	3675 Protein Added: WP_136512061.1 blaADC-24
cstrittmatter@0	3676 Protein Added: WP_136512062.1 blaADC-65
cstrittmatter@0	3677 Protein Added: WP_136512063.1 blaADC-66
cstrittmatter@0	3678 Protein Added: WP_136512064.1 blaCTX-M-225
cstrittmatter@0	3679 Protein Added: WP_136512065.1 blaCTX-M-226
cstrittmatter@0	3680 Protein Added: WP_136512066.1 blaFRI-7
cstrittmatter@0	3681 Protein Added: WP_136512067.1 blaIMI-18
cstrittmatter@0	3682 Protein Added: WP_136512068.1 blaIMP-39
cstrittmatter@0	3683 Protein Added: WP_136512069.1 blaIMP-46
cstrittmatter@0	3684 Protein Added: WP_136512070.1 blaKPC-42
cstrittmatter@0	3685 Protein Added: WP_136512071.1 blaKPC-43
cstrittmatter@0	3686 Protein Added: WP_136512072.1 blaNDM-28
cstrittmatter@0	3687 Protein Added: WP_136512073.1 blaOXA-114k
cstrittmatter@0	3688 Protein Added: WP_136512074.1 blaOXA-114n
cstrittmatter@0	3689 Protein Added: WP_136512075.1 blaOXA-114q
cstrittmatter@0	3690 Protein Added: WP_136512076.1 blaOXA-114r
cstrittmatter@0	3691 Protein Added: WP_136512077.1 blaOXA-114s
cstrittmatter@0	3692 Protein Added: WP_136512078.1 blaOXA-114t
cstrittmatter@0	3693 Protein Added: WP_136512079.1 blaOXA-114u
cstrittmatter@0	3694 Protein Added: WP_136512080.1 blaOXA-114v
cstrittmatter@0	3695 Protein Added: WP_136512081.1 blaOXA-114w
cstrittmatter@0	3696 Protein Added: WP_136512082.1 blaOXA-114x
cstrittmatter@0	3697 Protein Added: WP_136512083.1 blaOXA-787
cstrittmatter@0	3698 Protein Added: WP_136512084.1 blaOXA-788
cstrittmatter@0	3699 Protein Added: WP_136512085.1 blaOXA-793
cstrittmatter@0	3700 Protein Added: WP_136512086.1 blaOXA-794
cstrittmatter@0	3701 Protein Added: WP_136512087.1 blaOXA-795
cstrittmatter@0	3702 Protein Added: WP_136512088.1 blaOXA-797
cstrittmatter@0	3703 Protein Added: WP_136512089.1 blaOXA-798
cstrittmatter@0	3704 Protein Added: WP_136512090.1 blaOXA-799
cstrittmatter@0	3705 Protein Added: WP_136512091.1 blaOXA-800
cstrittmatter@0	3706 Protein Added: WP_136512092.1 blaOXA-801
cstrittmatter@0	3707 Protein Added: WP_136512093.1 blaOXA-802
cstrittmatter@0	3708 Protein Added: WP_136512094.1 blaOXA-803
cstrittmatter@0	3709 Protein Added: WP_136512095.1 blaOXA-804
cstrittmatter@0	3710 Protein Added: WP_136512096.1 blaOXA-805
cstrittmatter@0	3711 Protein Added: WP_136512097.1 blaOXA-806
cstrittmatter@0	3712 Protein Added: WP_136512098.1 blaOXA-807
cstrittmatter@0	3713 Protein Added: WP_136512099.1 blaOXA-808
cstrittmatter@0	3714 Protein Added: WP_136512100.1 blaOXA-809
cstrittmatter@0	3715 Protein Added: WP_136512101.1 blaOXA-810
cstrittmatter@0	3716 Protein Added: WP_136512102.1 blaOXA-811
cstrittmatter@0	3717 Protein Added: WP_136512103.1 blaOXA-823
cstrittmatter@0	3718 Protein Added: WP_136512104.1 blaOXA-824
cstrittmatter@0	3719 Protein Added: WP_136512105.1 blaPER-13
cstrittmatter@0	3720 Protein Added: WP_136512106.1 blaVIM-48
cstrittmatter@0	3721 Protein Added: WP_136512107.1 blaVIM-55
cstrittmatter@0	3722 Protein Added: WP_136512108.1 blaVIM-63
cstrittmatter@0	3723 Protein Added: WP_136512109.1 blaVIM-66
cstrittmatter@0	3724 Protein Added: WP_136512110.1 mcr-1.16
cstrittmatter@0	3725 Protein Added: WP_136512111.1 mcr-1.17
cstrittmatter@0	3726 Protein Added: WP_136512112.1 mcr-3.29
cstrittmatter@0	3727 Protein Modified: WP_001031075.1 dfr18 updated to WP_001031075.1 dfrA18
cstrittmatter@0	3728 Protein Modified: WP_032490189.1 dfrA18 updated to WP_032490189.1 dfrA19
cstrittmatter@0	3729 Protein Modified: WP_063843245.1 chrB updated to WP_063843245.1 chrB_rRNA_meth
cstrittmatter@0	3730 - AMR HMM library Changes:
cstrittmatter@0	3731 Prev. Release: 571
cstrittmatter@0	3732 This Release: 574
cstrittmatter@0	3733 Removed: 0
cstrittmatter@0	3734 Added: 3
cstrittmatter@0	3735 Changed: 571
cstrittmatter@0	3736 HMM Added: NF033818.0 blaOXA-114_like
cstrittmatter@0	3737 HMM Added: NF033836.1 polymyxin_MCR9
cstrittmatter@0	3738 HMM Added: NF033851.1 trim_DfrA35
cstrittmatter@0	3739 HMM Modified: NF000039.1 trim_Dfr18 renamed to NF000039.1 trim_DfrA18
cstrittmatter@0	3740 HMM Modified: NF000041.1 trim_DfrA18_A19 renamed to NF000041.1 trim_DfrA19
cstrittmatter@0	3741 HMM Modified: NF000422.2 blaPDC updated to NF000422.6 blaPDC
cstrittmatter@0	3742 - Protein family changes:
cstrittmatter@0	3743 Prev. Release: 1177
cstrittmatter@0	3744 This Release: 1119
cstrittmatter@0	3745 Removed: 68
cstrittmatter@0	3746 Added: 10
cstrittmatter@0	3747 Modified: 4
cstrittmatter@0	3748 Family Removed: - PORIN
cstrittmatter@0	3749 Family Removed: - aac(1)
cstrittmatter@0	3750 Family Removed: - aac(3')-IIe
cstrittmatter@0	3751 Family Removed: - aac(3)-Ie
cstrittmatter@0	3752 Family Removed: - aac(3)-VI
cstrittmatter@0	3753 Family Removed: - aac(3)-Vb
cstrittmatter@0	3754 Family Removed: - aac(6')-Ib8
cstrittmatter@0	3755 Family Removed: - aacA44
cstrittmatter@0	3756 Family Removed: - aadA1bt
cstrittmatter@0	3757 Family Removed: - aadA1r
cstrittmatter@0	3758 Family Removed: - aadA24
cstrittmatter@0	3759 Family Removed: - ampC_Eae
cstrittmatter@0	3760 Family Removed: - ampH
cstrittmatter@0	3761 Family Removed: - ampS
cstrittmatter@0	3762 Family Removed: - ant(3'')(9)
cstrittmatter@0	3763 Family Removed: - ant(3'')-Ii
cstrittmatter@0	3764 Family Removed: - aph(3')-Ic
cstrittmatter@0	3765 Family Removed: - arr-Cb
cstrittmatter@0	3766 Family Removed: - blaCMG
cstrittmatter@0	3767 Family Removed: - blaKLUG
cstrittmatter@0	3768 Family Removed: - blaLMB
cstrittmatter@0	3769 Family Removed: - blaMSI-OXA
cstrittmatter@0	3770 Family Removed: - blaOXA_missing
cstrittmatter@0	3771 Family Removed: - blaPNGM
cstrittmatter@0	3772 Family Removed: - blaZEG
cstrittmatter@0	3773 Family Removed: - blmS
cstrittmatter@0	3774 Family Removed: - catA12
cstrittmatter@0	3775 Family Removed: - ccrA
cstrittmatter@0	3776 Family Removed: NF000488.1 chrB
cstrittmatter@0	3777 Family Removed: - cml
cstrittmatter@0	3778 Family Removed: - cmlA7
cstrittmatter@0	3779 Family Removed: - cmlA9
cstrittmatter@0	3780 Family Removed: NF000039.1 dfr18
cstrittmatter@0	3781 Family Removed: NF000041.1 dfrA18_dfrA19
cstrittmatter@0	3782 Family Removed: - dfrA1_var
cstrittmatter@0	3783 Family Removed: - dfrA29
cstrittmatter@0	3784 Family Removed: - dfrA33
cstrittmatter@0	3785 Family Removed: - dfrB7
cstrittmatter@0	3786 Family Removed: - flo
cstrittmatter@0	3787 Family Removed: - mef(E)
cstrittmatter@0	3788 Family Removed: - mef(G)
cstrittmatter@0	3789 Family Removed: - mef(I)
cstrittmatter@0	3790 Family Removed: - mph(D)
cstrittmatter@0	3791 Family Removed: - nimF
cstrittmatter@0	3792 Family Removed: - nimH
cstrittmatter@0	3793 Family Removed: - omp35
cstrittmatter@0	3794 Family Removed: - ompE35
cstrittmatter@0	3795 Family Removed: - otr(C)
cstrittmatter@0	3796 Family Removed: - penA
cstrittmatter@0	3797 Family Removed: - sat2A
cstrittmatter@0	3798 Family Removed: - sat3A
cstrittmatter@0	3799 Family Removed: - spc
cstrittmatter@0	3800 Family Removed: - sul1delta
cstrittmatter@0	3801 Family Removed: - vanH-Ac2
cstrittmatter@0	3802 Family Removed: - vanH-F
cstrittmatter@0	3803 Family Removed: - vanR-Pt
cstrittmatter@0	3804 Family Removed: - vanR-Pt2
cstrittmatter@0	3805 Family Removed: - vanS-I
cstrittmatter@0	3806 Family Removed: - vanSc
cstrittmatter@0	3807 Family Removed: - vanTc4
cstrittmatter@0	3808 Family Removed: - vanX-Ac2
cstrittmatter@0	3809 Family Removed: - vanX-F
cstrittmatter@0	3810 Family Removed: - vanX-Pt2
cstrittmatter@0	3811 Family Removed: - vanY-40021673
cstrittmatter@0	3812 Family Removed: - vanY-D4
cstrittmatter@0	3813 Family Removed: - vanY-D5
cstrittmatter@0	3814 Family Removed: - vanY-M
cstrittmatter@0	3815 Family Removed: - vanY-Pt2
cstrittmatter@0	3816 Family Added: NF033818.0 blaOXA-114_like
cstrittmatter@0	3817 Family Added: NF033851.1 dfrA35
cstrittmatter@0	3818 Family Added: NF033124.1 estX
cstrittmatter@0	3819 Family Added: NF033836.1 mcr-9
cstrittmatter@0	3820 Family Added: - satA_Bs
cstrittmatter@0	3821 Family Added: - sulR
cstrittmatter@0	3822 Family Added: - sulX
cstrittmatter@0	3823 Family Changed: NF000422.2 blaPDC updated to NF000422.6 blaPDC
cstrittmatter@0	3824 Family Changed: NF000488.1 chrB renamed to chrB_rRNA_meth
cstrittmatter@0	3825 Family Changed: NF000039.1 dfr18 renamed to dfrA18
cstrittmatter@0	3826 Family Changed: NF000041.1 dfrA18_dfrA19 renamed to dfrA19
cstrittmatter@0	3827 ---------------------------------------------------------------------
cstrittmatter@0	3828 Changes included in 2019-02-08.1
cstrittmatter@0	3829 ---------------------------------------------------------------------
cstrittmatter@0	3830
cstrittmatter@0	3831 Two incorrectly assigned proteins were accidentally released. They are not
cstrittmatter@0	3832 AMR proteins and should not have been released. This release simply removes
cstrittmatter@0	3833 them and is otherwise unchanged.
cstrittmatter@0	3834
cstrittmatter@0	3835 - Protein changes:
cstrittmatter@0	3836 Prev. Release: 4812
cstrittmatter@0	3837 This Release: 4810
cstrittmatter@0	3838 Removed: 2
cstrittmatter@0	3839 Added: 0
cstrittmatter@0	3840 Changed: 4810
cstrittmatter@0	3841 Protein Removed: WP_000122253.1 sat
cstrittmatter@0	3842 Protein Removed: WP_001045652.1 sat
cstrittmatter@0	3843 ---------------------------------------------------------------------
cstrittmatter@0	3844 Changes included in 2019-02-04.1
cstrittmatter@0	3845 ---------------------------------------------------------------------
cstrittmatter@0	3846 - Protein name changes:
cstrittmatter@0	3847 "inhibitor-resistant" was added to the names of:
cstrittmatter@0	3848 blaKPC-8
cstrittmatter@0	3849 blaKPC-30
cstrittmatter@0	3850 blaKPC-31
cstrittmatter@0	3851 blaKPC-32
cstrittmatter@0	3852 blaKPC-33
cstrittmatter@0	3853 - Protein changes:
cstrittmatter@0	3854 Prev. Release: 4730
cstrittmatter@0	3855 This Release: 4812
cstrittmatter@0	3856 Removed: 0
cstrittmatter@0	3857 Added: 82
cstrittmatter@0	3858 Protein modified: WP_063855700.1 tet(35) replaced with WP_005480402.1
cstrittmatter@0	3859 Protein Added: WP_000122253.1 sat
cstrittmatter@0	3860 Protein Added: WP_001045652.1 sat
cstrittmatter@0	3861 Protein Added: WP_002415638.1 poxtA
cstrittmatter@0	3862 Protein Added: WP_003234144.1 vmlR
cstrittmatter@0	3863 Protein Added: WP_029728367.1 blaB
cstrittmatter@0	3864 Protein Added: WP_044103626.1 blaVEB-21
cstrittmatter@0	3865 Protein Added: WP_046693238.1 blaADC-181
cstrittmatter@0	3866 Protein Added: WP_049637206.1 blaOXA-780
cstrittmatter@0	3867 Protein Added: WP_057691114.1 blaADC-182
cstrittmatter@0	3868 Protein Added: WP_058492019.1 vanI
cstrittmatter@0	3869 Protein Added: WP_065980086.1 blaOXA-784
cstrittmatter@0	3870 Protein Added: WP_069953510.1 blaAFM-1
cstrittmatter@0	3871 Protein Added: WP_069996660.1 mecC3
cstrittmatter@0	3872 Protein Added: WP_071223118.1 taeA
cstrittmatter@0	3873 Protein Added: WP_087343787.1 ant(6)-Ic
cstrittmatter@0	3874 Protein Added: WP_087344360.1 blaBBI
cstrittmatter@0	3875 Protein Added: WP_087344902.1 catV
cstrittmatter@0	3876 Protein Added: WP_087346196.1 ant(4')-Ic
cstrittmatter@0	3877 Protein Added: WP_087347987.1 rphC
cstrittmatter@0	3878 Protein Added: WP_087348261.1 rphD
cstrittmatter@0	3879 Protein Added: WP_087349244.1 mphJ
cstrittmatter@0	3880 Protein Added: WP_087349651.1 aac(6')-35
cstrittmatter@0	3881 Protein Added: WP_114225343.1 blaOXA-739
cstrittmatter@0	3882 Protein Added: WP_123002100.1 blaGES-40
cstrittmatter@0	3883 Protein Added: WP_123002101.1 blaKPC-38
cstrittmatter@0	3884 Protein Added: WP_123002102.1 blaNDM-27
cstrittmatter@0	3885 Protein Added: WP_123002103.1 blaVIM-61
cstrittmatter@0	3886 Protein Added: WP_126205827.1 blaOXA-785
cstrittmatter@0	3887 Protein Added: WP_127728991.1 blaFRI-6
cstrittmatter@0	3888 Protein Added: WP_128268231.1 mecC2
cstrittmatter@0	3889 Protein Added: WP_128268232.1 blaADC-183
cstrittmatter@0	3890 Protein Added: WP_128268233.1 blaCARB-50
cstrittmatter@0	3891 Protein Added: WP_128268234.1 blaCFE-2
cstrittmatter@0	3892 Protein Added: WP_128268235.1 blaCTX-M-215
cstrittmatter@0	3893 Protein Added: WP_128268236.1 blaDHA-28
cstrittmatter@0	3894 Protein Added: WP_128268237.1 blaKPC-39
cstrittmatter@0	3895 Protein Added: WP_128268238.1 blaOXA-738
cstrittmatter@0	3896 Protein Added: WP_128268239.1 blaOXA-740
cstrittmatter@0	3897 Protein Added: WP_128268240.1 blaOXA-741
cstrittmatter@0	3898 Protein Added: WP_128268241.1 blaOXA-742
cstrittmatter@0	3899 Protein Added: WP_128268242.1 blaOXA-743
cstrittmatter@0	3900 Protein Added: WP_128268243.1 blaOXA-744
cstrittmatter@0	3901 Protein Added: WP_128268244.1 blaOXA-745
cstrittmatter@0	3902 Protein Added: WP_128268245.1 blaOXA-746
cstrittmatter@0	3903 Protein Added: WP_128268246.1 blaOXA-747
cstrittmatter@0	3904 Protein Added: WP_128268247.1 blaOXA-748
cstrittmatter@0	3905 Protein Added: WP_128268248.1 blaOXA-749
cstrittmatter@0	3906 Protein Added: WP_128268249.1 blaOXA-750
cstrittmatter@0	3907 Protein Added: WP_128268250.1 blaOXA-751
cstrittmatter@0	3908 Protein Added: WP_128268251.1 blaOXA-752
cstrittmatter@0	3909 Protein Added: WP_128268252.1 blaOXA-753
cstrittmatter@0	3910 Protein Added: WP_128268253.1 blaOXA-754
cstrittmatter@0	3911 Protein Added: WP_128268254.1 blaOXA-755
cstrittmatter@0	3912 Protein Added: WP_128268255.1 blaOXA-756
cstrittmatter@0	3913 Protein Added: WP_128268256.1 blaOXA-757
cstrittmatter@0	3914 Protein Added: WP_128268257.1 blaOXA-758
cstrittmatter@0	3915 Protein Added: WP_128268258.1 blaOXA-759
cstrittmatter@0	3916 Protein Added: WP_128268259.1 blaOXA-760
cstrittmatter@0	3917 Protein Added: WP_128268260.1 blaOXA-761
cstrittmatter@0	3918 Protein Added: WP_128268261.1 blaOXA-762
cstrittmatter@0	3919 Protein Added: WP_128268262.1 blaOXA-763
cstrittmatter@0	3920 Protein Added: WP_128268263.1 blaOXA-764
cstrittmatter@0	3921 Protein Added: WP_128268264.1 blaOXA-765
cstrittmatter@0	3922 Protein Added: WP_128268265.1 blaOXA-766
cstrittmatter@0	3923 Protein Added: WP_128268266.1 blaOXA-767
cstrittmatter@0	3924 Protein Added: WP_128268267.1 blaOXA-768
cstrittmatter@0	3925 Protein Added: WP_128268268.1 blaOXA-769
cstrittmatter@0	3926 Protein Added: WP_128268269.1 blaOXA-770
cstrittmatter@0	3927 Protein Added: WP_128268270.1 blaOXA-771
cstrittmatter@0	3928 Protein Added: WP_128268271.1 blaOXA-772
cstrittmatter@0	3929 Protein Added: WP_128268272.1 blaOXA-773
cstrittmatter@0	3930 Protein Added: WP_128268273.1 blaOXA-774
cstrittmatter@0	3931 Protein Added: WP_128268274.1 blaOXA-775
cstrittmatter@0	3932 Protein Added: WP_128268275.1 blaOXA-776
cstrittmatter@0	3933 Protein Added: WP_128268276.1 blaOXA-781
cstrittmatter@0	3934 Protein Added: WP_128268277.1 blaOXA-782
cstrittmatter@0	3935 Protein Added: WP_128268278.1 blaOXA-783
cstrittmatter@0	3936 Protein Added: WP_128268279.1 blaOXA-786
cstrittmatter@0	3937 Protein Added: WP_128268280.1 blaPDC-317
cstrittmatter@0	3938 Protein Added: WP_128268286.1 blaVEB-20
cstrittmatter@0	3939 Protein Added: WP_128268287.1 blaVIM-62
cstrittmatter@0	3940 Protein Added: WP_128268288.1 qnrS15
cstrittmatter@0	3941 - AMR HMM library Changes:
cstrittmatter@0	3942 Prev. Release: 568
cstrittmatter@0	3943 This Release: 571
cstrittmatter@0	3944 Removed: 0
cstrittmatter@0	3945 Added: 3
cstrittmatter@0	3946 HMM Added: NF033714.1 blaBBI
cstrittmatter@0	3947 HMM Added: NF033736.1 blaAFM
cstrittmatter@0	3948 HMM Added: NF033815.0 blaOXA-364_like
cstrittmatter@0	3949 HMM Modified: NF000355.2 ribo_prot_ABC_F updated to NF000355.3 ribo_prot_ABC_F
cstrittmatter@0	3950 - Protein family changes:
cstrittmatter@0	3951 Prev. Release: 1161
cstrittmatter@0	3952 This Release: 1177
cstrittmatter@0	3953 Removed: 0
cstrittmatter@0	3954 Added: 16
cstrittmatter@0	3955 Family Added: - aac(6')-35
cstrittmatter@0	3956 Family Added: - ant(4')-Ic
cstrittmatter@0	3957 Family Added: - ant(6)-Ic
cstrittmatter@0	3958 Family Added: NF033736.1 blaAFM
cstrittmatter@0	3959 Family Added: NF033714.1 blaBBI
cstrittmatter@0	3960 Family Added: NF033815.0 blaOXA-364_like
cstrittmatter@0	3961 Family Added: - mecC2
cstrittmatter@0	3962 Family Added: - mecC3
cstrittmatter@0	3963 Family Added: - mphJ
cstrittmatter@0	3964 Family Added: - poxtA
cstrittmatter@0	3965 Family Added: - rphC
cstrittmatter@0	3966 Family Added: - rphD
cstrittmatter@0	3967 Family Added: - rph_gen
cstrittmatter@0	3968 Family Added: - satA_Ba
cstrittmatter@0	3969 Family Added: - taeA
cstrittmatter@0	3970 Family Added: - vmlR
cstrittmatter@0	3971 Family Changed: NF000355.2 abc-f updated to NF000355.3 abc-f
cstrittmatter@0	3972
cstrittmatter@0	3973 ---------------------------------------------------------------------
cstrittmatter@0	3974 Changes included in 2018-11-07.1
cstrittmatter@0	3975 ---------------------------------------------------------------------
cstrittmatter@0	3976
cstrittmatter@0	3977 Due to a communication error three blaOXA alleles in the AMR database have
cstrittmatter@0	3978 been reassigned. Alleles published by Tian, et al. (PMID:30247543) have
cstrittmatter@0	3979 replaced them.
cstrittmatter@0	3980
cstrittmatter@0	3981 AFY12006.1 JX846494.1 WP_072678505.1 NG_061615.1 were blaOXA-669, now they are blaOXA-732
cstrittmatter@0	3982 AAL47570.1 AY066004.1 WP_114699266.1 NG_061383.1 were blaOXA-666, now they are blaOXA-729
cstrittmatter@0	3983 AXH06203.1 MH684781.1 WP_116786836.1 NG_061623.1 were blaOXA-667, now they are blaOXA-730
cstrittmatter@0	3984
cstrittmatter@0	3985 - Protein changes:
cstrittmatter@0	3986 Prev. Release: 4579
cstrittmatter@0	3987 This Release: 4730
cstrittmatter@0	3988 Removed: 0
cstrittmatter@0	3989 Added: 151
cstrittmatter@0	3990 Protein Added: WP_004143591.1 blaSHV-206
cstrittmatter@0	3991 Protein Added: WP_004384957.1 blaCSA-2
cstrittmatter@0	3992 Protein Added: WP_007888761.1 blaCSA-1
cstrittmatter@0	3993 Protein Added: WP_011245929.1 clbB
cstrittmatter@0	3994 Protein Added: WP_011707905.1 blaOXA-725
cstrittmatter@0	3995 Protein Added: WP_012116915.1 clbA
cstrittmatter@0	3996 Protein Added: WP_015892743.1 clbC
cstrittmatter@0	3997 Protein Added: WP_016162389.1 blaOXA-673
cstrittmatter@0	3998 Protein Added: WP_016168805.1 blaOXA-664
cstrittmatter@0	3999 Protein Added: WP_016651348.1 blaOXA-670
cstrittmatter@0	4000 Protein Added: WP_016657654.1 blaOXA-665
cstrittmatter@0	4001 Protein Added: WP_016660101.1 blaOXA-671
cstrittmatter@0	4002 Protein Added: WP_016685888.1 blaOXA-715
cstrittmatter@0	4003 Protein Added: WP_017822040.1 qnrVC10
cstrittmatter@0	4004 Protein Added: WP_023271137.1 blaOXA-672
cstrittmatter@0	4005 Protein Added: WP_023341517.1 blaSHV-211
cstrittmatter@0	4006 Protein Added: WP_031998610.1 blaOXA-716
cstrittmatter@0	4007 Protein Added: WP_032018141.1 blaOXA-717
cstrittmatter@0	4008 Protein Added: WP_032495491.1 blaKLUC-3
cstrittmatter@0	4009 Protein Added: WP_032495492.1 blaKLUC-4
cstrittmatter@0	4010 Protein Added: WP_032974004.1 blaCMA-1
cstrittmatter@0	4011 Protein Added: WP_033179079.1 crpP
cstrittmatter@0	4012 Protein Added: WP_034612711.1 blaOXA-668
cstrittmatter@0	4013 Protein Added: WP_056517622.1 blaOXA-669
cstrittmatter@0	4014 Protein Added: WP_057097547.1 aph(2'')-If2
cstrittmatter@0	4015 Protein Added: WP_058652112.1 dfrA34
cstrittmatter@0	4016 Protein Added: WP_064733493.1 blaSHV-207
cstrittmatter@0	4017 Protein Added: WP_064760451.1 qepA4
cstrittmatter@0	4018 Protein Added: WP_064768701.1 qepA7
cstrittmatter@0	4019 Protein Added: WP_077096319.1 blaOXA-724
cstrittmatter@0	4020 Protein Added: WP_081406929.1 blaOXA-674
cstrittmatter@0	4021 Protein Added: WP_081853183.1 blaELM-1
cstrittmatter@0	4022 Protein Added: WP_092689909.1 blaOXA-666
cstrittmatter@0	4023 Protein Added: WP_094166899.1 blaCTX-M-224
cstrittmatter@0	4024 Protein Added: WP_096735335.1 blaOXA-667
cstrittmatter@0	4025 Protein Added: WP_096941464.1 qepA6
cstrittmatter@0	4026 Protein Added: WP_100663667.1 blaKLUC-5
cstrittmatter@0	4027 Protein Added: WP_101150415.1 blaOXA-726
cstrittmatter@0	4028 Protein Added: WP_104159136.1 blaSHV-224
cstrittmatter@0	4029 Protein Added: WP_105620838.1 blaCMA-2
cstrittmatter@0	4030 Protein Added: WP_109232473.1 blaSHV-220
cstrittmatter@0	4031 Protein Added: WP_109638756.1 qepA8
cstrittmatter@0	4032 Protein Added: WP_112021705.1 qepA9
cstrittmatter@0	4033 Protein Added: WP_113334341.1 qepA10
cstrittmatter@0	4034 Protein Added: WP_115196748.1 blaSHV-210
cstrittmatter@0	4035 Protein Added: WP_117241614.1 blaSHV-223
cstrittmatter@0	4036 Protein Added: WP_122630822.1 blaEFM-1
cstrittmatter@0	4037 Protein Added: WP_122630823.1 blaEVM-1
cstrittmatter@0	4038 Protein Added: WP_122630824.1 blaECM-1
cstrittmatter@0	4039 Protein Added: WP_122630825.1 blaEAM-1
cstrittmatter@0	4040 Protein Added: WP_122630826.1 blaGES-38
cstrittmatter@0	4041 Protein Added: WP_122630827.1 blaGES-39
cstrittmatter@0	4042 Protein Added: WP_122630828.1 blaVIM-53
cstrittmatter@0	4043 Protein Added: WP_122630829.1 blaDHT2-1
cstrittmatter@0	4044 Protein Added: WP_122630830.1 blaSPN79-1
cstrittmatter@0	4045 Protein Added: WP_122630831.1 blaCRD3-1
cstrittmatter@0	4046 Protein Added: WP_122630832.1 blaALG6-1
cstrittmatter@0	4047 Protein Added: WP_122630833.1 blaALG11-1
cstrittmatter@0	4048 Protein Added: WP_122630834.1 blaGRD33-1
cstrittmatter@0	4049 Protein Added: WP_122630835.1 blaGRD23-1
cstrittmatter@0	4050 Protein Added: WP_122630836.1 blaCMY-158
cstrittmatter@0	4051 Protein Added: WP_122630837.1 blaCMY-159
cstrittmatter@0	4052 Protein Added: WP_122630838.1 blaSHV-201
cstrittmatter@0	4053 Protein Added: WP_122630839.1 blaSHV-202
cstrittmatter@0	4054 Protein Added: WP_122630840.1 aph(2'')
cstrittmatter@0	4055 Protein Added: WP_122630841.1 blaTEM-237
cstrittmatter@0	4056 Protein Added: WP_122630842.1 blaOXA-655
cstrittmatter@0	4057 Protein Added: WP_122630843.1 blaOXA-656
cstrittmatter@0	4058 Protein Added: WP_122630844.1 blaOXA-733
cstrittmatter@0	4059 Protein Added: WP_122630845.1 blaPDC-307
cstrittmatter@0	4060 Protein Added: WP_122630846.1 blaPDC-308
cstrittmatter@0	4061 Protein Added: WP_122630847.1 blaPDC-309
cstrittmatter@0	4062 Protein Added: WP_122630848.1 blaPDC-310
cstrittmatter@0	4063 Protein Added: WP_122630849.1 blaPDC-311
cstrittmatter@0	4064 Protein Added: WP_122630850.1 blaPDC-312
cstrittmatter@0	4065 Protein Added: WP_122630851.1 blaPDC-313
cstrittmatter@0	4066 Protein Added: WP_122630852.1 blaPDC-314
cstrittmatter@0	4067 Protein Added: WP_122630853.1 blaOXA-734
cstrittmatter@0	4068 Protein Added: WP_122630854.1 blaOXA-735
cstrittmatter@0	4069 Protein Added: WP_122630855.1 blaOXA-736
cstrittmatter@0	4070 Protein Added: WP_122630856.1 blaOXA-737
cstrittmatter@0	4071 Protein Added: WP_122630857.1 blaOXA-675
cstrittmatter@0	4072 Protein Added: WP_122630858.1 blaOXA-676
cstrittmatter@0	4073 Protein Added: WP_122630859.1 blaOXA-677
cstrittmatter@0	4074 Protein Added: WP_122630860.1 blaOXA-678
cstrittmatter@0	4075 Protein Added: WP_122630861.1 blaIMP-80
cstrittmatter@0	4076 Protein Added: WP_122630862.1 blaCTX-M-223
cstrittmatter@0	4077 Protein Added: WP_122630863.1 blaSHV-205
cstrittmatter@0	4078 Protein Added: WP_122630864.1 blaOXA-680
cstrittmatter@0	4079 Protein Added: WP_122630865.1 blaSHV-208
cstrittmatter@0	4080 Protein Added: WP_122630866.1 blaSHV-209
cstrittmatter@0	4081 Protein Added: WP_122630867.1 blaSHV-212
cstrittmatter@0	4082 Protein Added: WP_122630868.1 blaSHV-213
cstrittmatter@0	4083 Protein Added: WP_122630869.1 blaSHV-214
cstrittmatter@0	4084 Protein Added: WP_122630870.1 blaSHV-215
cstrittmatter@0	4085 Protein Added: WP_122630871.1 blaSHV-216
cstrittmatter@0	4086 Protein Added: WP_122630872.1 blaSHV-217
cstrittmatter@0	4087 Protein Added: WP_122630873.1 blaSHV-218
cstrittmatter@0	4088 Protein Added: WP_122630874.1 blaSHV-219
cstrittmatter@0	4089 Protein Added: WP_122630875.1 blaSHV-221
cstrittmatter@0	4090 Protein Added: WP_122630876.1 blaSHV-222
cstrittmatter@0	4091 Protein Added: WP_122630877.1 blaSHV-225
cstrittmatter@0	4092 Protein Added: WP_122630878.1 blaSHV-226
cstrittmatter@0	4093 Protein Added: WP_122630879.1 blaSHV-227
cstrittmatter@0	4094 Protein Added: WP_122630880.1 blaSHV-228
cstrittmatter@0	4095 Protein Added: WP_122630881.1 blaOXA-681
cstrittmatter@0	4096 Protein Added: WP_122630882.1 blaPDC-315
cstrittmatter@0	4097 Protein Added: WP_122630883.1 blaPDC-316
cstrittmatter@0	4098 Protein Added: WP_122630884.1 blaOXA-682
cstrittmatter@0	4099 Protein Added: WP_122630885.1 blaOXA-683
cstrittmatter@0	4100 Protein Added: WP_122630886.1 blaOXA-684
cstrittmatter@0	4101 Protein Added: WP_122630887.1 blaOXA-685
cstrittmatter@0	4102 Protein Added: WP_122630888.1 blaOXA-686
cstrittmatter@0	4103 Protein Added: WP_122630889.1 blaOXA-687
cstrittmatter@0	4104 Protein Added: WP_122630890.1 blaOXA-688
cstrittmatter@0	4105 Protein Added: WP_122630891.1 blaOXA-689
cstrittmatter@0	4106 Protein Added: WP_122630892.1 blaOXA-690
cstrittmatter@0	4107 Protein Added: WP_122630893.1 blaOXA-691
cstrittmatter@0	4108 Protein Added: WP_122630894.1 blaOXA-692
cstrittmatter@0	4109 Protein Added: WP_122630895.1 blaOXA-693
cstrittmatter@0	4110 Protein Added: WP_122630896.1 blaOXA-694
cstrittmatter@0	4111 Protein Added: WP_122630897.1 blaOXA-695
cstrittmatter@0	4112 Protein Added: WP_122630898.1 blaOXA-696
cstrittmatter@0	4113 Protein Added: WP_122630899.1 blaOXA-697
cstrittmatter@0	4114 Protein Added: WP_122630900.1 blaOXA-698
cstrittmatter@0	4115 Protein Added: WP_122630901.1 blaOXA-699
cstrittmatter@0	4116 Protein Added: WP_122630902.1 blaOXA-700
cstrittmatter@0	4117 Protein Added: WP_122630903.1 blaOXA-701
cstrittmatter@0	4118 Protein Added: WP_122630904.1 blaOXA-702
cstrittmatter@0	4119 Protein Added: WP_122630905.1 blaOXA-703
cstrittmatter@0	4120 Protein Added: WP_122630906.1 blaOXA-704
cstrittmatter@0	4121 Protein Added: WP_122630907.1 blaOXA-705
cstrittmatter@0	4122 Protein Added: WP_122630908.1 blaOXA-706
cstrittmatter@0	4123 Protein Added: WP_122630909.1 blaOXA-707
cstrittmatter@0	4124 Protein Added: WP_122630910.1 blaOXA-718
cstrittmatter@0	4125 Protein Added: WP_122630911.1 blaOXA-719
cstrittmatter@0	4126 Protein Added: WP_122630912.1 blaOXA-720
cstrittmatter@0	4127 Protein Added: WP_122630913.1 blaOXA-721
cstrittmatter@0	4128 Protein Added: WP_122630914.1 blaOXA-722
cstrittmatter@0	4129 Protein Added: WP_122630915.1 blaOXA-723
cstrittmatter@0	4130 Protein Added: WP_122630916.1 blaOXA-708
cstrittmatter@0	4131 Protein Added: WP_122630917.1 blaOXA-709
cstrittmatter@0	4132 Protein Added: WP_122630918.1 blaOXA-710
cstrittmatter@0	4133 Protein Added: WP_122630919.1 blaOXA-711
cstrittmatter@0	4134 Protein Added: WP_122630920.1 blaOXA-712
cstrittmatter@0	4135 Protein Added: WP_122630921.1 blaOXA-713
cstrittmatter@0	4136 Protein Added: WP_122630922.1 blaOXA-714
cstrittmatter@0	4137 Protein Added: WP_122630923.1 blaOXA-777
cstrittmatter@0	4138 Protein Added: WP_122630924.1 blaOXA-778
cstrittmatter@0	4139 Protein Added: WP_122634438.1 blaOXA-779
cstrittmatter@0	4140 Protein Added: WP_122634439.1 blaOXA-679
cstrittmatter@0	4141 Gene Symbol Modified: WP_010890145.1 qacE_gen updated to WP_010890145.1 qacE
cstrittmatter@0	4142 Gene Symbol Modified: WP_053515552.1 qacE_gen updated to WP_053515552.1 qacE
cstrittmatter@0	4143 Gene Symbol Modified: WP_063844281.1 cphA updated to WP_063844281.1 cphA3
cstrittmatter@0	4144 Gene Symbol Modified: WP_063854778.1 qepA updated to WP_063854778.1 qepA5
cstrittmatter@0	4145 Gene Symbol Modified: WP_072678505.1 blaOXA-669 updated to WP_072678505.1 blaOXA-732
cstrittmatter@0	4146 Gene Symbol Modified: WP_114699266.1 blaOXA-666 updated to WP_114699266.1 blaOXA-729
cstrittmatter@0	4147 Gene Symbol Modified: WP_116786836.1 blaOXA-667 updated to WP_116786836.1 blaOXA-730
cstrittmatter@0	4148 - AMR HMM library Changes:
cstrittmatter@0	4149 Prev. Release: 563
cstrittmatter@0	4150 This Release: 568
cstrittmatter@0	4151 Removed: 0
cstrittmatter@0	4152 Added: 5
cstrittmatter@0	4153 HMM Added: NF033692.1 APH_2pp_I_a_f_h
cstrittmatter@0	4154 HMM Added: NF033693.0 AAC_6p_Ie_fam
cstrittmatter@0	4155 HMM Added: NF033698.1 blaCSA
cstrittmatter@0	4156 HMM Added: NF033700.1 blaCMA
cstrittmatter@0	4157 HMM Added: NF033702.0 blaOXA-12_like
cstrittmatter@0	4158 HMM Name Modified: NF033666.1 blaOXA-664_like updated to NF033666.1 blaOXA-727_like
cstrittmatter@0	4159 - Protein family changes:
cstrittmatter@0	4160 Prev. Release: 1133
cstrittmatter@0	4161 This Release: 1161
cstrittmatter@0	4162 Removed: 0
cstrittmatter@0	4163 Added: 28
cstrittmatter@0	4164 Family Added: - aac(6')-Ie2
cstrittmatter@0	4165 Family Added: NF033693.0 aac(6')-Ie_fam
cstrittmatter@0	4166 Family Added: NF011706.2 acrB
cstrittmatter@0	4167 Family Added: NF007842.1 acrD
cstrittmatter@0	4168 Family Added: NF000314.1 adeB/adeJ
cstrittmatter@0	4169 Family Added: NF033692.1 aph(2'')-I_a_f_h
cstrittmatter@0	4170 Family Added: - aph(2'')-If2
cstrittmatter@0	4171 Family Added: - blaALG11
cstrittmatter@0	4172 Family Added: - blaALG6
cstrittmatter@0	4173 Family Added: NF033700.1 blaCMA
cstrittmatter@0	4174 Family Added: - blaCRD3
cstrittmatter@0	4175 Family Added: NF033698.1 blaCSA
cstrittmatter@0	4176 Family Added: - blaCrA
cstrittmatter@0	4177 Family Added: - blaDHT2
cstrittmatter@0	4178 Family Added: - blaEAM
cstrittmatter@0	4179 Family Added: - blaECM
cstrittmatter@0	4180 Family Added: - blaEFM
cstrittmatter@0	4181 Family Added: - blaELM
cstrittmatter@0	4182 Family Added: - blaEVM
cstrittmatter@0	4183 Family Added: - blaGRD23
cstrittmatter@0	4184 Family Added: - blaGRD33
cstrittmatter@0	4185 Family Added: NF033702.0 blaOXA-12_like
cstrittmatter@0	4186 Family Added: - blaPNGM
cstrittmatter@0	4187 Family Added: - blaSPN79
cstrittmatter@0	4188 Family Added: - catV
cstrittmatter@0	4189 Family Added: - crpP
cstrittmatter@0	4190 Family Added: - dfrA34
cstrittmatter@0	4191 Family Added: - qacE
cstrittmatter@0	4192 Family Renamed: NF033666.1 blaOXA-664_like became blaOXA-727_like
cstrittmatter@0	4193
cstrittmatter@0	4194 ---------------------------------------------------------------------
cstrittmatter@0	4195 Changes included in 2018-09-14.1
cstrittmatter@0	4196 ----------------------------------------------------------------------
cstrittmatter@0	4197 - Protein changes:
cstrittmatter@0	4198 Prev. Release: 4569
cstrittmatter@0	4199 This Release: 4579
cstrittmatter@0	4200 Removed: 0
cstrittmatter@0	4201 Added: 10
cstrittmatter@0	4202 Protein Added: WP_116786828.1 mcr-4.6
cstrittmatter@0	4203 Protein Added: WP_116786829.1 blaCTX-M-222
cstrittmatter@0	4204 Protein Added: WP_116786830.1 mcr-1.15
cstrittmatter@0	4205 Protein Added: WP_116786831.1 blaTEM-236
cstrittmatter@0	4206 Protein Added: WP_116786832.1 blaKPC-37
cstrittmatter@0	4207 Protein Added: WP_116786834.1 blaPDC-304
cstrittmatter@0	4208 Protein Added: WP_116786836.1 blaOXA-667
cstrittmatter@0	4209 Protein Added: WP_116786837.1 blaPDC-305
cstrittmatter@0	4210 Protein Added: WP_116786838.1 blaPDC-306
cstrittmatter@0	4211 Protein Added: WP_116786839.1 blaIMP-79
cstrittmatter@0	4212 - AMR HMM library Changes:
cstrittmatter@0	4213 Prev. Release: 563
cstrittmatter@0	4214 This Release: 563
cstrittmatter@0	4215 Removed: 0
cstrittmatter@0	4216 Added: 0
cstrittmatter@0	4217 - Protein family changes:
cstrittmatter@0	4218 Prev. Release: 1133
cstrittmatter@0	4219 This Release: 1133
cstrittmatter@0	4220 Removed: 0
cstrittmatter@0	4221 Added: 0
cstrittmatter@0	4222
cstrittmatter@0	4223 ---------------------------------------------------------------------
cstrittmatter@0	4224 Changes included in 2018-08-24.1
cstrittmatter@0	4225 ---------------------------------------------------------------------
cstrittmatter@0	4226 - Protein changes:
cstrittmatter@0	4227 Prev. Release: 4563
cstrittmatter@0	4228 This Release: 4569
cstrittmatter@0	4229 Removed: 1
cstrittmatter@0	4230 Added: 7
cstrittmatter@0	4231 Protein Removed: WP_063843217.1 catA1
cstrittmatter@0	4232 Protein Added: WP_003436401.1 vanR-Cd
cstrittmatter@0	4233 Protein Added: WP_009889012.1 vanZ1
cstrittmatter@0	4234 Protein Added: WP_011861275.1 vanS-Cd
cstrittmatter@0	4235 Protein Added: WP_011861276.1 vanG-Cd
cstrittmatter@0	4236 Protein Added: WP_020924773.1 blaAXC-1
cstrittmatter@0	4237 Protein Added: WP_072310976.1 mcr-8.2
cstrittmatter@0	4238 Protein Added: WP_072678505.1 blaOXA-669
cstrittmatter@0	4239 - AMR HMM library Changes:
cstrittmatter@0	4240 Prev. Release: 563
cstrittmatter@0	4241 This Release: 563
cstrittmatter@0	4242 Removed: 0
cstrittmatter@0	4243 Added: 0
cstrittmatter@0	4244 - Protein family changes:
cstrittmatter@0	4245 Prev. Release: 1128
cstrittmatter@0	4246 This Release: 1133
cstrittmatter@0	4247 Removed: 0
cstrittmatter@0	4248 Added: 5
cstrittmatter@0	4249 Family Added: - blaAXC
cstrittmatter@0	4250 Family Added: - vanG-Cd
cstrittmatter@0	4251 Family Added: - vanR-Cd
cstrittmatter@0	4252 Family Added: - vanS-Cd
cstrittmatter@0	4253 Family Added: - vanZ1
cstrittmatter@0	4254
cstrittmatter@0	4255 ---------------------------------------------------------------------
cstrittmatter@0	4256 Changes included in 2018-08-01.1
cstrittmatter@0	4257 ---------------------------------------------------------------------
cstrittmatter@0	4258 - Protein changes:
cstrittmatter@0	4259 Prev. Release: 4528
cstrittmatter@0	4260 This Release: 4563
cstrittmatter@0	4261 Removed: 0
cstrittmatter@0	4262 Added: 35
cstrittmatter@0	4263 Protein Added: WP_000622776.1 qacA
cstrittmatter@0	4264 Protein Added: WP_001159761.1 blaADC-176
cstrittmatter@0	4265 Protein Added: WP_001211208.1 blaADC-175
cstrittmatter@0	4266 Protein Added: WP_010730188.1 qacZ
cstrittmatter@0	4267 Protein Added: WP_013095270.1 blaCMH-4
cstrittmatter@0	4268 Protein Added: WP_032410229.1 blaOXA-663
cstrittmatter@0	4269 Protein Added: WP_033487869.1 blaACT-56
cstrittmatter@0	4270 Protein Added: WP_046887417.1 blaCMH-5
cstrittmatter@0	4271 Protein Added: WP_047052637.1 blaACT-55
cstrittmatter@0	4272 Protein Added: WP_050861789.1 blaACT-64
cstrittmatter@0	4273 Protein Added: WP_070210118.1 blaOXA-658
cstrittmatter@0	4274 Protein Added: WP_094935119.1 blaACT-57
cstrittmatter@0	4275 Protein Added: WP_111772163.1 blaVIM-58
cstrittmatter@0	4276 Protein Added: WP_111976052.1 blaACT-60
cstrittmatter@0	4277 Protein Added: WP_112017656.1 blaACT-61
cstrittmatter@0	4278 Protein Added: WP_112792421.1 blaACT-59
cstrittmatter@0	4279 Protein Added: WP_114699266.1 blaOXA-666
cstrittmatter@0	4280 Protein Added: WP_114699267.1 blaKPC-36
cstrittmatter@0	4281 Protein Added: WP_114699268.1 blaADC-174
cstrittmatter@0	4282 Protein Added: WP_114699269.1 blaADC-177
cstrittmatter@0	4283 Protein Added: WP_114699270.1 blaADC-178
cstrittmatter@0	4284 Protein Added: WP_114699271.1 blaADC-179
cstrittmatter@0	4285 Protein Added: WP_114699272.1 blaADC-180
cstrittmatter@0	4286 Protein Added: WP_114699273.1 blaOXA-661
cstrittmatter@0	4287 Protein Added: WP_114699274.1 blaOXA-662
cstrittmatter@0	4288 Protein Added: WP_114699275.1 mcr-8.1
cstrittmatter@0	4289 Protein Added: WP_114699276.1 blaOXA-659
cstrittmatter@0	4290 Protein Added: WP_114699277.1 blaVIM-60
cstrittmatter@0	4291 Protein Added: WP_114699278.1 mcr-5.3
cstrittmatter@0	4292 Protein Added: WP_114699279.1 blaOXA-660
cstrittmatter@0	4293 Protein Added: WP_114699280.1 blaIMP-76
cstrittmatter@0	4294 Protein Added: WP_114699281.1 blaIMP-77
cstrittmatter@0	4295 Protein Added: WP_114699282.1 blaIMP-78
cstrittmatter@0	4296 Protein Added: WP_114699283.1 blaVIM-59
cstrittmatter@0	4297 Protein Added: WP_114699284.1 blaCTX-M-221
cstrittmatter@0	4298 - AMR HMM library Changes:
cstrittmatter@0	4299 Prev. Release: 557
cstrittmatter@0	4300 This Release: 563
cstrittmatter@0	4301 Removed: 0
cstrittmatter@0	4302 Added: 6
cstrittmatter@0	4303 HMM Added: NF033648.1 blaOXA-274_like
cstrittmatter@0	4304 HMM Added: NF033666.1 blaOXA-664_like
cstrittmatter@0	4305 HMM Added: NF033667.0 blaOXA-55_like
cstrittmatter@0	4306 HMM Added: NF033669.1 polymyxin_MCR8
cstrittmatter@0	4307 HMM Added: NF033670.1 polymyxin_MCR6
cstrittmatter@0	4308 HMM Added: NF033671.1 polymyxin_MCR7
cstrittmatter@0	4309 - Protein family changes:
cstrittmatter@0	4310 Prev. Release: 1123
cstrittmatter@0	4311 This Release: 1128
cstrittmatter@0	4312 Removed: 0
cstrittmatter@0	4313 Added: 5
cstrittmatter@0	4314 Family Added: - blaOXA-266_fam
cstrittmatter@0	4315 Family Added: NF033648.1 blaOXA-274_like
cstrittmatter@0	4316 Family Added: NF033667.1 blaOXA-55_like
cstrittmatter@0	4317 Family Added: NF033666.1 blaOXA-664_like
cstrittmatter@0	4318 Family Added: NF033669.1 mcr-8
cstrittmatter@0	4319 HMM Added: mcr-6 updated to NF033670.1 mcr-6
cstrittmatter@0	4320 HMM Added: mcr-7 updated to NF033671.1 mcr-7
cstrittmatter@0	4321
cstrittmatter@0	4322 Updates in 2018-07-07.1
cstrittmatter@0	4323 - Fix in amr_report.cpp to remove extra field from AMRFinder output
cstrittmatter@0	4324
cstrittmatter@0	4325 Updates in 2018-06-27.1
cstrittmatter@0	4326 - Summary:
cstrittmatter@0	4327 - Protein sequences
cstrittmatter@0	4328 - Removed 1 protein sequence
cstrittmatter@0	4329 - Added 290 protein sequences
cstrittmatter@0	4330 - Changed the names of 2 proteins
cstrittmatter@0	4331 - Gene families
cstrittmatter@0	4332 - cfr was reorganized
cstrittmatter@0	4333 - HMM library
cstrittmatter@0	4334 - 58 HMMs not in the AMR family hierarchy were removed. They were not
cstrittmatter@0	4335 used for AMR gene identification so this should have no effect on
cstrittmatter@0	4336 AMRFinder output.
cstrittmatter@0	4337 - The polymyxin_MCR3 HMM was updated
cstrittmatter@0	4338 - Details:
cstrittmatter@0	4339 Protein Removed: WP_063945333.1 aac(6')-IIa
cstrittmatter@0	4340 Protein Added: WP_000131886.1 aac(3)-VIa
cstrittmatter@0	4341 Protein Added: WP_000778180.1 varG
cstrittmatter@0	4342 Protein Added: WP_001100752.1 blaPER-10
cstrittmatter@0	4343 Protein Added: WP_002812372.1 blaOXA-578
cstrittmatter@0	4344 Protein Added: WP_002824679.1 blaOXA-595
cstrittmatter@0	4345 Protein Added: WP_002837769.1 blaOXA-579
cstrittmatter@0	4346 Protein Added: WP_002857546.1 blaOXA-592
cstrittmatter@0	4347 Protein Added: WP_002889704.1 blaOXA-591
cstrittmatter@0	4348 Protein Added: WP_002936877.1 blaOXA-623
cstrittmatter@0	4349 Protein Added: WP_011339581.1 blaRHO
cstrittmatter@0	4350 Protein Added: WP_011497575.1 blaSHN-1
cstrittmatter@0	4351 Protein Added: WP_011550565.1 blaMYX-1
cstrittmatter@0	4352 Protein Added: WP_011638903.1 mcr-4.3
cstrittmatter@0	4353 Protein Added: WP_012263521.1 mupA
cstrittmatter@0	4354 Protein Added: WP_012541790.1 blaLEN-28
cstrittmatter@0	4355 Protein Added: WP_012698469.1 blaLHK-7
cstrittmatter@0	4356 Protein Added: WP_013255389.1 blaSPS-1
cstrittmatter@0	4357 Protein Added: WP_013992183.1 blaZOG-1
cstrittmatter@0	4358 Protein Added: WP_014206564.1 blaOXA-642
cstrittmatter@0	4359 Protein Added: WP_015058260.1 qnrS11
cstrittmatter@0	4360 Protein Added: WP_015266427.1 blaECV-1
cstrittmatter@0	4361 Protein Added: WP_015431537.1 blaROB-2
cstrittmatter@0	4362 Protein Added: WP_015818996.1 blaTTU-1
cstrittmatter@0	4363 Protein Added: WP_016252988.1 blaPDC-286
cstrittmatter@0	4364 Protein Added: WP_021018581.1 catB8
cstrittmatter@0	4365 Protein Added: WP_025006557.1 blaOXA-580
cstrittmatter@0	4366 Protein Added: WP_026025287.1 blaALI-1
cstrittmatter@0	4367 Protein Added: WP_031192893.1 aadA31
cstrittmatter@0	4368 Protein Added: WP_034035338.1 blaPDC-240
cstrittmatter@0	4369 Protein Added: WP_035203840.1 catA10
cstrittmatter@0	4370 Protein Added: WP_038333643.1 blaEBR-2
cstrittmatter@0	4371 Protein Added: WP_038640920.1 qnrB12
cstrittmatter@0	4372 Protein Added: WP_041079981.1 erm(44)v
cstrittmatter@0	4373 Protein Added: WP_041258349.1 blaFIA-1
cstrittmatter@0	4374 Protein Added: WP_041385949.1 blaSGM-2
cstrittmatter@0	4375 Protein Added: WP_041449074.1 blaANA-1
cstrittmatter@0	4376 Protein Added: WP_043774378.1 catA13
cstrittmatter@0	4377 Protein Added: WP_043942497.1 blaPST-1
cstrittmatter@0	4378 Protein Added: WP_044600959.1 blaOXA-594
cstrittmatter@0	4379 Protein Added: WP_044779552.1 blaOXA-638
cstrittmatter@0	4380 Protein Added: WP_048236419.1 qnrB85
cstrittmatter@0	4381 Protein Added: WP_052259183.1 erm(42)
cstrittmatter@0	4382 Protein Added: WP_052781249.1 blaOXA-583
cstrittmatter@0	4383 Protein Added: WP_052788483.1 blaOXA-611
cstrittmatter@0	4384 Protein Added: WP_052788887.1 blaOXA-581
cstrittmatter@0	4385 Protein Added: WP_052794776.1 blaOXA-625
cstrittmatter@0	4386 Protein Added: WP_052798312.1 blaOXA-609
cstrittmatter@0	4387 Protein Added: WP_052800105.1 blaOXA-597
cstrittmatter@0	4388 Protein Added: WP_052803794.1 blaOXA-601
cstrittmatter@0	4389 Protein Added: WP_052858477.1 blaOXA-637
cstrittmatter@0	4390 Protein Added: WP_053872444.1 blaOXA-639
cstrittmatter@0	4391 Protein Added: WP_053921012.1 blaOXA-603
cstrittmatter@0	4392 Protein Added: WP_057036510.1 blaOXA-629
cstrittmatter@0	4393 Protein Added: WP_058157026.1 blaPDC-271
cstrittmatter@0	4394 Protein Added: WP_058174497.1 blaPDC-250
cstrittmatter@0	4395 Protein Added: WP_058870660.1 blaOXA-651
cstrittmatter@0	4396 Protein Added: WP_058951457.1 blaOXA-652
cstrittmatter@0	4397 Protein Added: WP_061193431.1 blaPDC-298
cstrittmatter@0	4398 Protein Added: WP_064186845.1 qnrS13
cstrittmatter@0	4399 Protein Added: WP_065597326.1 blaALI-2
cstrittmatter@0	4400 Protein Added: WP_065801616.1 mcr-3.20
cstrittmatter@0	4401 Protein Added: WP_065908739.1 qnrB91
cstrittmatter@0	4402 Protein Added: WP_070233680.1 blaOXA-614
cstrittmatter@0	4403 Protein Added: WP_070698497.1 blaPDC-278
cstrittmatter@0	4404 Protein Added: WP_071701819.1 qnrS12
cstrittmatter@0	4405 Protein Added: WP_071846333.1 aac(6')_Serra
cstrittmatter@0	4406 Protein Added: WP_073669325.1 blaPDC-285
cstrittmatter@0	4407 Protein Added: WP_075606311.1 blaROB-3
cstrittmatter@0	4408 Protein Added: WP_078207746.1 qnrE2
cstrittmatter@0	4409 Protein Added: WP_078318620.1 blaROB-4
cstrittmatter@0	4410 Protein Added: WP_080699425.1 blaTEM-229
cstrittmatter@0	4411 Protein Added: WP_081048762.1 blaMYO-1
cstrittmatter@0	4412 Protein Added: WP_081666691.1 blaLHK-1
cstrittmatter@0	4413 Protein Added: WP_085843691.1 qnrB95
cstrittmatter@0	4414 Protein Added: WP_087696200.1 blaOXA-576
cstrittmatter@0	4415 Protein Added: WP_087879616.1 mcr-3.19
cstrittmatter@0	4416 Protein Added: WP_088303859.1 blaOXA-624
cstrittmatter@0	4417 Protein Added: WP_094308975.1 mcr-3.22
cstrittmatter@0	4418 Protein Added: WP_094312656.1 mcr-3.21
cstrittmatter@0	4419 Protein Added: WP_094313523.1 mcr-3.23
cstrittmatter@0	4420 Protein Added: WP_094321595.1 mcr-3.24
cstrittmatter@0	4421 Protein Added: WP_094963248.1 aadA31
cstrittmatter@0	4422 Protein Added: WP_096170112.1 qnrS14
cstrittmatter@0	4423 Protein Added: WP_096865225.1 blaPER-12
cstrittmatter@0	4424 Protein Added: WP_100831609.1 blaPDC-245
cstrittmatter@0	4425 Protein Added: WP_103034696.1 blaROB-5
cstrittmatter@0	4426 Protein Added: WP_103252528.1 mcr-3.25
cstrittmatter@0	4427 Protein Added: WP_104009831.1 blaPER-11
cstrittmatter@0	4428 Protein Added: WP_104009832.1 blaPDC-234
cstrittmatter@0	4429 Protein Added: WP_104009833.1 blaPDC-235
cstrittmatter@0	4430 Protein Added: WP_104009834.1 blaPDC-236
cstrittmatter@0	4431 Protein Added: WP_104009835.1 blaPDC-237
cstrittmatter@0	4432 Protein Added: WP_104009836.1 blaPDC-238
cstrittmatter@0	4433 Protein Added: WP_104009837.1 blaPDC-239
cstrittmatter@0	4434 Protein Added: WP_104009838.1 blaPDC-241
cstrittmatter@0	4435 Protein Added: WP_104009839.1 blaPDC-242
cstrittmatter@0	4436 Protein Added: WP_104009840.1 blaPDC-243
cstrittmatter@0	4437 Protein Added: WP_104009841.1 blaPDC-244
cstrittmatter@0	4438 Protein Added: WP_104009842.1 blaPDC-246
cstrittmatter@0	4439 Protein Added: WP_104009843.1 blaPDC-247
cstrittmatter@0	4440 Protein Added: WP_104009844.1 blaPDC-248
cstrittmatter@0	4441 Protein Added: WP_104009846.1 blaVIM-56
cstrittmatter@0	4442 Protein Added: WP_104009847.1 blaCTX-M-178
cstrittmatter@0	4443 Protein Added: WP_104009848.1 blaCTX-M-187
cstrittmatter@0	4444 Protein Added: WP_104009849.1 blaCMY-156
cstrittmatter@0	4445 Protein Added: WP_104009850.1 mcr-1.12
cstrittmatter@0	4446 Protein Added: WP_104009851.1 mcr-7.1
cstrittmatter@0	4447 Protein Added: WP_104009852.1 blaIMP-71
cstrittmatter@0	4448 Protein Added: WP_104009853.1 blaOXA-575
cstrittmatter@0	4449 Protein Added: WP_104009854.1 blaTEM-230
cstrittmatter@0	4450 Protein Added: WP_104009855.1 blaTEM-231
cstrittmatter@0	4451 Protein Added: WP_104009856.1 blaPDC-227
cstrittmatter@0	4452 Protein Added: WP_104009857.1 blaPDC-228
cstrittmatter@0	4453 Protein Added: WP_104009858.1 blaPDC-229
cstrittmatter@0	4454 Protein Added: WP_104009859.1 blaPDC-230
cstrittmatter@0	4455 Protein Added: WP_104009860.1 blaPDC-231
cstrittmatter@0	4456 Protein Added: WP_104009861.1 blaPDC-232
cstrittmatter@0	4457 Protein Added: WP_104009862.1 blaPDC-233
cstrittmatter@0	4458 Protein Added: WP_104531863.1 blaBUT-1
cstrittmatter@0	4459 Protein Added: WP_104531864.1 blaBUT-2
cstrittmatter@0	4460 Protein Added: WP_104531865.1 blaLHK-2
cstrittmatter@0	4461 Protein Added: WP_104531866.1 blaLHK-3
cstrittmatter@0	4462 Protein Added: WP_104531867.1 blaLHK-4
cstrittmatter@0	4463 Protein Added: WP_104531868.1 blaLHK-5
cstrittmatter@0	4464 Protein Added: WP_104531869.1 blaLHK-6
cstrittmatter@0	4465 Protein Added: WP_106672612.1 blaCMY-150
cstrittmatter@0	4466 Protein Added: WP_106924209.1 blaCTX-M-213
cstrittmatter@0	4467 Protein Added: WP_109544237.1 tet(S)
cstrittmatter@0	4468 Protein Added: WP_109545031.1 dfrA14
cstrittmatter@0	4469 Protein Added: WP_109545032.1 qnrB11
cstrittmatter@0	4470 Protein Added: WP_109545033.1 vanY-D
cstrittmatter@0	4471 Protein Added: WP_109545034.1 qnrB22
cstrittmatter@0	4472 Protein Added: WP_109545035.1 qacF
cstrittmatter@0	4473 Protein Added: WP_109545038.1 tet(33)
cstrittmatter@0	4474 Protein Added: WP_109545039.1 blaSTA-1
cstrittmatter@0	4475 Protein Added: WP_109545040.1 chrB
cstrittmatter@0	4476 Protein Added: WP_109545041.1 aph(3'')-Ib
cstrittmatter@0	4477 Protein Added: WP_109545042.1 blaORR-1
cstrittmatter@0	4478 Protein Added: WP_109545044.1 blaKPC-34
cstrittmatter@0	4479 Protein Added: WP_109545045.1 qnrD3
cstrittmatter@0	4480 Protein Added: WP_109545046.1 qnrB81
cstrittmatter@0	4481 Protein Added: WP_109545047.1 qnrB82
cstrittmatter@0	4482 Protein Added: WP_109545048.1 blaOXA-542
cstrittmatter@0	4483 Protein Added: WP_109545049.1 blaNDM-20
cstrittmatter@0	4484 Protein Added: WP_109545050.1 blaCRH-2
cstrittmatter@0	4485 Protein Added: WP_109545051.1 blaCRH-3
cstrittmatter@0	4486 Protein Added: WP_109545053.1 blaIMP-73
cstrittmatter@0	4487 Protein Added: WP_109545054.1 mcr-4.5
cstrittmatter@0	4488 Protein Added: WP_109545055.1 mcr-4.4
cstrittmatter@0	4489 Protein Added: WP_109545056.1 mcr-1.13
cstrittmatter@0	4490 Protein Added: WP_109545057.1 mcr-5.2
cstrittmatter@0	4491 Protein Added: WP_109545058.1 mcr-4.2
cstrittmatter@0	4492 Protein Added: WP_109545059.1 blaTEM-232
cstrittmatter@0	4493 Protein Added: WP_109545060.1 blaCTX-M-208
cstrittmatter@0	4494 Protein Added: WP_109545061.1 blaCTX-M-209
cstrittmatter@0	4495 Protein Added: WP_109545062.1 blaCTX-M-210
cstrittmatter@0	4496 Protein Added: WP_109545063.1 blaCTX-M-211
cstrittmatter@0	4497 Protein Added: WP_109545064.1 blaCTX-M-212
cstrittmatter@0	4498 Protein Added: WP_109545065.1 blaCMY-161
cstrittmatter@0	4499 Protein Added: WP_109545066.1 blaFOX-16
cstrittmatter@0	4500 Protein Added: WP_109545067.1 blaDHA-27
cstrittmatter@0	4501 Protein Added: WP_109545068.1 blaDHA-26
cstrittmatter@0	4502 Protein Added: WP_109545069.1 blaCTX-M-214
cstrittmatter@0	4503 Protein Added: WP_109545070.1 mcr-3.12
cstrittmatter@0	4504 Protein Added: WP_109545071.1 blaOXA-649
cstrittmatter@0	4505 Protein Added: WP_109545072.1 blaOXA-641
cstrittmatter@0	4506 Protein Added: WP_109545073.1 blaFRI-5
cstrittmatter@0	4507 Protein Added: WP_109545074.1 blaGPC-1
cstrittmatter@0	4508 Protein Added: WP_109545075.1 blaOXA-619
cstrittmatter@0	4509 Protein Added: WP_109545076.1 blaOXA-620
cstrittmatter@0	4510 Protein Added: WP_109545077.1 blaOXA-636
cstrittmatter@0	4511 Protein Added: WP_109545078.1 blaOXA-635
cstrittmatter@0	4512 Protein Added: WP_109545079.1 blaOXA-631
cstrittmatter@0	4513 Protein Added: WP_109545080.1 blaOXA-626
cstrittmatter@0	4514 Protein Added: WP_109545081.1 blaOXA-627
cstrittmatter@0	4515 Protein Added: WP_109545082.1 blaOXA-633
cstrittmatter@0	4516 Protein Added: WP_109545083.1 blaOXA-628
cstrittmatter@0	4517 Protein Added: WP_109545084.1 blaOXA-634
cstrittmatter@0	4518 Protein Added: WP_109545085.1 blaOXA-630
cstrittmatter@0	4519 Protein Added: WP_109545086.1 blaOXA-632
cstrittmatter@0	4520 Protein Added: WP_109545087.1 blaOXA-608
cstrittmatter@0	4521 Protein Added: WP_109545088.1 blaOXA-584
cstrittmatter@0	4522 Protein Added: WP_109545089.1 blaOXA-585
cstrittmatter@0	4523 Protein Added: WP_109545090.1 blaOXA-586
cstrittmatter@0	4524 Protein Added: WP_109545091.1 blaOXA-577
cstrittmatter@0	4525 Protein Added: WP_109545092.1 blaOXA-587
cstrittmatter@0	4526 Protein Added: WP_109545093.1 blaOXA-596
cstrittmatter@0	4527 Protein Added: WP_109545094.1 blaOXA-600
cstrittmatter@0	4528 Protein Added: WP_109545095.1 blaOXA-588
cstrittmatter@0	4529 Protein Added: WP_109545096.1 blaOXA-589
cstrittmatter@0	4530 Protein Added: WP_109545097.1 blaOXA-593
cstrittmatter@0	4531 Protein Added: WP_109545098.1 blaOXA-599
cstrittmatter@0	4532 Protein Added: WP_109545099.1 blaOXA-610
cstrittmatter@0	4533 Protein Added: WP_109545100.1 blaOXA-612
cstrittmatter@0	4534 Protein Added: WP_109545101.1 blaOXA-598
cstrittmatter@0	4535 Protein Added: WP_109545102.1 blaOXA-607
cstrittmatter@0	4536 Protein Added: WP_109545103.1 blaOXA-590
cstrittmatter@0	4537 Protein Added: WP_109545104.1 blaOXA-604
cstrittmatter@0	4538 Protein Added: WP_109545105.1 blaOXA-602
cstrittmatter@0	4539 Protein Added: WP_109545106.1 blaOXA-606
cstrittmatter@0	4540 Protein Added: WP_109545107.1 blaOXA-582
cstrittmatter@0	4541 Protein Added: WP_109545108.1 blaOXA-605
cstrittmatter@0	4542 Protein Added: WP_109545109.1 blaOXA-640
cstrittmatter@0	4543 Protein Added: WP_109545110.1 blaOXA-616
cstrittmatter@0	4544 Protein Added: WP_109545111.1 blaOXA-613
cstrittmatter@0	4545 Protein Added: WP_109545112.1 blaOXA-622
cstrittmatter@0	4546 Protein Added: WP_109545113.1 blaOXA-618
cstrittmatter@0	4547 Protein Added: WP_109545114.1 blaOXA-617
cstrittmatter@0	4548 Protein Added: WP_109545115.1 blaOXA-615
cstrittmatter@0	4549 Protein Added: WP_109545116.1 blaOXA-621
cstrittmatter@0	4550 Protein Added: WP_109791184.1 blaTEM-233
cstrittmatter@0	4551 Protein Added: WP_109791185.1 blaPDC-251
cstrittmatter@0	4552 Protein Added: WP_109791186.1 blaPDC-252
cstrittmatter@0	4553 Protein Added: WP_109791187.1 blaPDC-253
cstrittmatter@0	4554 Protein Added: WP_109791188.1 blaPDC-254
cstrittmatter@0	4555 Protein Added: WP_109791189.1 blaPDC-255
cstrittmatter@0	4556 Protein Added: WP_109791190.1 blaPDC-256
cstrittmatter@0	4557 Protein Added: WP_109791191.1 blaPDC-257
cstrittmatter@0	4558 Protein Added: WP_109791192.1 blaPDC-258
cstrittmatter@0	4559 Protein Added: WP_109791193.1 blaPDC-259
cstrittmatter@0	4560 Protein Added: WP_109791194.1 blaPDC-260
cstrittmatter@0	4561 Protein Added: WP_109791195.1 blaPDC-261
cstrittmatter@0	4562 Protein Added: WP_109791196.1 blaPDC-262
cstrittmatter@0	4563 Protein Added: WP_109791197.1 blaPDC-263
cstrittmatter@0	4564 Protein Added: WP_109791198.1 blaPDC-264
cstrittmatter@0	4565 Protein Added: WP_109791199.1 blaPDC-265
cstrittmatter@0	4566 Protein Added: WP_109791200.1 blaPDC-266
cstrittmatter@0	4567 Protein Added: WP_109791201.1 blaPDC-267
cstrittmatter@0	4568 Protein Added: WP_109791202.1 blaPDC-268
cstrittmatter@0	4569 Protein Added: WP_109791203.1 blaPDC-270
cstrittmatter@0	4570 Protein Added: WP_109791204.1 blaPDC-272
cstrittmatter@0	4571 Protein Added: WP_109791205.1 blaPDC-273
cstrittmatter@0	4572 Protein Added: WP_109791206.1 blaPDC-274
cstrittmatter@0	4573 Protein Added: WP_109791207.1 blaIMP-74
cstrittmatter@0	4574 Protein Added: WP_109791208.1 blaIMP-75
cstrittmatter@0	4575 Protein Added: WP_109791209.1 blaCTX-M-216
cstrittmatter@0	4576 Protein Added: WP_109791210.1 blaTEM-234
cstrittmatter@0	4577 Protein Added: WP_109791211.1 blaCTX-M-217
cstrittmatter@0	4578 Protein Added: WP_109791212.1 blaSHV-204
cstrittmatter@0	4579 Protein Added: WP_109791213.1 blaNDM-22
cstrittmatter@0	4580 Protein Added: WP_109791214.1 blaCTX-M-218
cstrittmatter@0	4581 Protein Added: WP_109791215.1 blaCMY-160
cstrittmatter@0	4582 Protein Added: WP_109791216.1 blaOXA-654
cstrittmatter@0	4583 Protein Added: WP_109997726.1 qnrA9
cstrittmatter@0	4584 Protein Added: WP_110092882.1 blaCTX-M-219
cstrittmatter@0	4585 Protein Added: WP_111273842.1 mcr-3.13
cstrittmatter@0	4586 Protein Added: WP_111273843.1 mcr-3.14
cstrittmatter@0	4587 Protein Added: WP_111273844.1 mcr-3.15
cstrittmatter@0	4588 Protein Added: WP_111273845.1 mcr-3.16
cstrittmatter@0	4589 Protein Added: WP_111273846.1 mcr-3.17
cstrittmatter@0	4590 Protein Added: WP_111273847.1 mcr-3.18
cstrittmatter@0	4591 Protein Added: WP_111273848.1 blaGES-35
cstrittmatter@0	4592 Protein Added: WP_111273849.1 blaGES-36
cstrittmatter@0	4593 Protein Added: WP_111273850.1 blaGES-37
cstrittmatter@0	4594 Protein Added: WP_111273851.1 blaCMY-162
cstrittmatter@0	4595 Protein Added: WP_111273852.1 blaKPC-35
cstrittmatter@0	4596 Protein Added: WP_111672883.1 blaPDC-275
cstrittmatter@0	4597 Protein Added: WP_111672884.1 blaPDC-294
cstrittmatter@0	4598 Protein Added: WP_111672885.1 blaPDC-295
cstrittmatter@0	4599 Protein Added: WP_111672886.1 blaPDC-296
cstrittmatter@0	4600 Protein Added: WP_111672887.1 blaPDC-297
cstrittmatter@0	4601 Protein Added: WP_111672888.1 blaPDC-299
cstrittmatter@0	4602 Protein Added: WP_111672889.1 blaPDC-300
cstrittmatter@0	4603 Protein Added: WP_111672890.1 blaPDC-276
cstrittmatter@0	4604 Protein Added: WP_111672891.1 blaPDC-277
cstrittmatter@0	4605 Protein Added: WP_111672892.1 blaPDC-279
cstrittmatter@0	4606 Protein Added: WP_111672893.1 blaPDC-280
cstrittmatter@0	4607 Protein Added: WP_111672894.1 blaPDC-281
cstrittmatter@0	4608 Protein Added: WP_111672895.1 blaPDC-282
cstrittmatter@0	4609 Protein Added: WP_111672896.1 blaPDC-283
cstrittmatter@0	4610 Protein Added: WP_111672897.1 blaPDC-284
cstrittmatter@0	4611 Protein Added: WP_111672898.1 blaPDC-287
cstrittmatter@0	4612 Protein Added: WP_111672899.1 blaPDC-288
cstrittmatter@0	4613 Protein Added: WP_111672900.1 blaPDC-289
cstrittmatter@0	4614 Protein Added: WP_111672901.1 blaPDC-290
cstrittmatter@0	4615 Protein Added: WP_111672902.1 blaCTX-M-220
cstrittmatter@0	4616 Protein Added: WP_111672903.1 blaPDC-291
cstrittmatter@0	4617 Protein Added: WP_111672904.1 blaPDC-292
cstrittmatter@0	4618 Protein Added: WP_111672905.1 blaPDC-293
cstrittmatter@0	4619 Protein Added: WP_111672906.1 blaCMY-163
cstrittmatter@0	4620 Protein Added: WP_111672907.1 blaOXA-657
cstrittmatter@0	4621 Protein Added: WP_111672908.1 blaPDC-301
cstrittmatter@0	4622 Protein Added: WP_111672909.1 blaPDC-302
cstrittmatter@0	4623 Protein Added: WP_111672910.1 blaPDC-303
cstrittmatter@0	4624 Protein Added: WP_111672911.1 blaKPC-23
cstrittmatter@0	4625 Protein Added: WP_111672912.1 blaNDM-23
cstrittmatter@0	4626 Protein Added: WP_111672913.1 blaNDM-24
cstrittmatter@0	4627 Protein Added: WP_111672914.1 blaVIM-57
cstrittmatter@0	4628 Protein Added: WP_111690897.1 cfr(B)
cstrittmatter@0	4629 Protein Added: WP_111690898.1 cfr(C)
cstrittmatter@0	4630 Protein Modified: WP_011987126.1 cfrC updated to WP_011987126.1 cfr-Cb
cstrittmatter@0	4631 Protein Modified: WP_063854808.1 qnrS updated to WP_063854808.1 qnrS10
cstrittmatter@0	4632 HMM Removed: NF000031.1 MFS_efflux_LmrA
cstrittmatter@0	4633 HMM Removed: NF000040.1 172051428_tet
cstrittmatter@0	4634 HMM Removed: NF000058.1 Erm41
cstrittmatter@0	4635 HMM Removed: NF000060.1 MFS_efflux_LmrB
cstrittmatter@0	4636 HMM Removed: NF000106.1 40850658_otr
cstrittmatter@0	4637 HMM Removed: NF000131.1 MATE_multi_MepA
cstrittmatter@0	4638 HMM Removed: NF000140.3 AAC_6p_Salmo
cstrittmatter@0	4639 HMM Removed: NF000217.1 MATE_multi_FepA
cstrittmatter@0	4640 HMM Removed: NF000247.1 MexA
cstrittmatter@0	4641 HMM Removed: NF000249.1 MexE
cstrittmatter@0	4642 HMM Removed: NF000250.1 MexH
cstrittmatter@0	4643 HMM Removed: NF000251.1 MexW-MexI
cstrittmatter@0	4644 HMM Removed: NF000252.1 MexX
cstrittmatter@0	4645 HMM Removed: NF000263.1 MATE_multi_NorM
cstrittmatter@0	4646 HMM Removed: NF000282.2 RND_permease_1
cstrittmatter@0	4647 HMM Removed: NF000313.1 adeA-adeI
cstrittmatter@0	4648 HMM Removed: NF000314.1 adeB
cstrittmatter@0	4649 HMM Removed: NF000315.1 adeC-adeK-oprM
cstrittmatter@0	4650 HMM Removed: NF000334.3 drrA
cstrittmatter@0	4651 HMM Removed: NF000336.1 emrE
cstrittmatter@0	4652 HMM Removed: NF000342.3 glpA_Cterm
cstrittmatter@0	4653 HMM Removed: NF000344.1 macA
cstrittmatter@0	4654 HMM Removed: NF000345.1 macB
cstrittmatter@0	4655 HMM Removed: NF000349.1 mfpA_AE000516.2
cstrittmatter@0	4656 HMM Removed: NF000352.1 norA
cstrittmatter@0	4657 HMM Removed: NF000357.1 romA
cstrittmatter@0	4658 HMM Removed: NF000391.1 EmrB
cstrittmatter@0	4659 HMM Removed: NF010314.2 PRK13751.2
cstrittmatter@0	4660 HMM Removed: NF012135.0 ANT_3pp_9_crypt
cstrittmatter@0	4661 HMM Removed: NF012144.2 ramA_TF
cstrittmatter@0	4662 HMM Removed: NF012163.2 BaeS_SmeS
cstrittmatter@0	4663 HMM Removed: NF012168.1 BlaI_of_BCL
cstrittmatter@0	4664 HMM Removed: NF012198.0 MarA_TF
cstrittmatter@0	4665 HMM Removed: NF012208.0 SDR_dihy_bifunc
cstrittmatter@0	4666 HMM Removed: NF012226.0 AdeS_HK
cstrittmatter@0	4667 HMM Removed: NF012227.0 AdeR_RR
cstrittmatter@0	4668 HMM Removed: NF012228.1 RobA_TF
cstrittmatter@0	4669 HMM Removed: NF028537.1 P_eth_NH2_trans
cstrittmatter@0	4670 HMM Removed: NF030466.0 TIGR02052
cstrittmatter@0	4671 HMM Removed: NF030467.0 TIGR02053
cstrittmatter@0	4672 HMM Removed: NF033086.2 penta_rpt_Qnr
cstrittmatter@0	4673 HMM Removed: NF033124.1 estX
cstrittmatter@0	4674 HMM Removed: NF033134.0 cmlA_floR
cstrittmatter@0	4675 HMM Removed: NF033138.1 RND-peri-MexC
cstrittmatter@0	4676 HMM Removed: NF033142.1 efflux_OM_AdeC
cstrittmatter@0	4677 HMM Removed: NF033143.1 efflux_OM_AdeK
cstrittmatter@0	4678 HMM Removed: NF033184.1 B3_Acin_new1
cstrittmatter@0	4679 HMM Removed: NF033480.1 bifunc_MprF
cstrittmatter@0	4680 HMM Removed: NF033553.1 MerP_Gpos
cstrittmatter@0	4681 HMM Removed: NF033555.1 lyase_MerB
cstrittmatter@0	4682 HMM Removed: NF033556.1 MerTP_fusion
cstrittmatter@0	4683 HMM Removed: NF033560.1 merT_RC607
cstrittmatter@0	4684 HMM Removed: NF033565.0 trans_MerF
cstrittmatter@0	4685 HMM Removed: NF033606.1 heat_AAA_ClpK
cstrittmatter@0	4686 HMM Removed: NF033607.0 disagg_AAA_ClpG
cstrittmatter@0	4687 HMM Removed: NF033617.1 RND_permease_2
cstrittmatter@0	4688 HMM Removed: NF033627.1 intimin_all
cstrittmatter@0	4689 HMM Removed: NF033636.1 acid_shock_Asr
cstrittmatter@0	4690 HMM Modified: NF033408.2 polymyxin_MCR3 updated to NF033408.5 polymyxin_MCR3
cstrittmatter@0	4691 Family Removed: - cfrC
cstrittmatter@0	4692 Family Added: - cfr(B)
cstrittmatter@0	4693 Family Added: - cfr(C)
cstrittmatter@0	4694 Family Added: - cfr-Cb
cstrittmatter@0	4695 Family Changed: NF033408.2 mcr-3 updated to NF033408.5 mcr-3
cstrittmatter@0	4696
cstrittmatter@0	4697 ---------------------------------------------------------------------
cstrittmatter@0	4698 Changes included in 2018-05-15.1
cstrittmatter@0	4699 ---------------------------------------------------------------------
cstrittmatter@0	4700 - Data Changes:
cstrittmatter@0	4701 Protein Removed: WP_010886396.1 lmr(B)
cstrittmatter@0	4702 HMM Added: NF033614.1 APH_6_Ic_gen
cstrittmatter@0	4703 HMM Added: NF033617.1 RND_permease_2
cstrittmatter@0	4704 HMM Added: NF033626.1 blaBKC_GPC
cstrittmatter@0	4705 HMM Added: NF033627.1 intimin_all
cstrittmatter@0	4706 HMM Added: NF033636.1 acid_shock_Asr
cstrittmatter@0	4707 HMM Modified: NF000011.1 APH_6_Ic updated to NF000011.2 APH_6_Ic
cstrittmatter@0	4708 HMM Modified: NF000221.3 FosA updated to NF000221.4 FosA
cstrittmatter@0	4709 HMM Modified: NF000282.1 RND_permease_1 updated to NF000282.2 RND_permease_1
cstrittmatter@0	4710 HMM Modified: NF000428.2 blaFRI updated to NF000428.4 blaFRI
cstrittmatter@0	4711 HMM Modified: NF033582.0 blaALI updated to NF033582.2 blaALI
cstrittmatter@0	4712 Family Removed: NF000060.1 lmr(B)
cstrittmatter@0	4713 Family Added: NF033626.1 blaBKC_GPC
cstrittmatter@0	4714 Family Added: - blaGPC
cstrittmatter@0	4715 - Algorithm Changes:
cstrittmatter@0	4716 - Partial proteins identified as "Method" PARTIAL if length of blast
cstrittmatter@0	4717 alignment > 50% and < 90% of database protein.
cstrittmatter@0	4718
cstrittmatter@0	4719 ---------------------------------------------------------------------
cstrittmatter@0	4720 Changes included in 2018-05-08.1 RELEASE CANDIDATE
cstrittmatter@0	4721 ---------------------------------------------------------------------
cstrittmatter@0	4722 - Addition of handling for genbank plasmid gff
cstrittmatter@0	4723
cstrittmatter@0	4724 ---------------------------------------------------------------------
cstrittmatter@0	4725 Changes included in 2018-04-16.1
cstrittmatter@0	4726 ---------------------------------------------------------------------
cstrittmatter@0	4727 - Addition of file format checking for FASTA and GFF files before AMRFinder blast and HMM searches are run
cstrittmatter@0	4728 - Altered format of fam.tab file to include NF accessions for families
cstrittmatter@0	4729 - Removal of non-reportable families from fam.tab

Mercurial > repos > cstrittmatter > test_galtrakr_eurl_vtec_wgs_pt_23

annotate data/amrfinder/changes.txt @ 1:5224b4d51065 tip