Mercurial > repos > estrain > amrfinderplus_db

annotate test-data/test_7/amrfinderplus_protein_output.fasta @ 7:de2011569700 draft default tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload commit 50e7d8610c04e06eb15f09131d6a2d1b204de6a9
author galaxytrakr
date Fri, 13 Mar 2026 15:43:54 +0000
parents 3e93d920163b
children
Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
rev   line source
6
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
1 >blaTEM-156 blaTEM-156 class A beta-lactamase TEM-156
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
2 MSIQHFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVGYIELDLNSGKILESFRP
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
3 EERFPMMSTFKVLLCGAVLSRVDAGQEQLGRRIHYSQNDLVEYSPVTEKHLTDGMTVREL
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
4 CSAAITMSDNTAANLLLTTIGGPKELTAFLHNIGDHVTRLDRWEPELNEAIPNDERDTTM
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
5 PAAMATTLRKLLTGELLTLASRQQLIDWMEADKVAGPLLRSALPAGWFIADKSGAGERGS
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
6 RGIIAALGPDGKPSRIVVIYTTGSQATMDERNRQIAEIGASLIKHW
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
7 >blaPDC-114_blast blaPDC PDC family class C beta-lactamase
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
8 MRDTRFPCLCGIAASTLLFATTPAIAGEAPADRLKALVDAAVQPVMKANDIPGLAVAISL
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
9 KGEPHYFSYGLASKEDGRRVTPETLFEIGSVSKTFTATLAGYALTQDKMRLDDRASQHWP
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
10 ALVGSRFDGISLLDLATYTAGGLPLQFPDSVQKDQAQIRDYYRQWQPTYAPGSQRLYSNP
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
11 SIGLFGYLAARSLGQPFERLMEQQVFPALGLEQTHLDVPEAALAQYAQGYGKDDRPLRAG
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
12 PGPLDAEGYGVKTSAADLLRFVDANLHPERLDRPWAQALDATHRGYYKVGDMTQGLGWEA
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
13 YDWPISLKRLQAGNSTPMALQPHRIARLPAPQALEGQRLLNKTGSTNGFGAYVAFVPGRD
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
14 LGLVILANRNYPNAERVKIAYAILSGLEQQGKVPLKR
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
15 >blaOXA-436_partial blaOXA OXA-48 family class D beta-lactamase
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
16 MRALALSAVLMVTTMIGMPAVAKEWQENKSWNAHFSEHKTQGVVVLWNENTQQGFTNDLK
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
17 RANQAFLPASTFKIPNSLIALDLGVVKDEHQVFKWDGQTRDIAAWNRDHDLITAMKYSVV
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
18 PVYQEFARQIGEARMSKMLHAFDYGNEDISGNLDSFWLDGGIRISATQQIAFLRKLYHNK
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
19 LHVSERSQRIVKQAMLTEANADYIIRAKTGYSVRIEPKIGWWVGWIELDDNVW
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
20 >vanG vanG D-alanine--D-serine ligase VanG
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
21 MQNKKIAVIFGGNSTEYEVSLQSASAVFENINTNKFDIIPIGITRSGEWYHYTGEKEKIL
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
22 NNTWFEDSKNLCPVVVSQNRSVKGFLEIASDKYRIIKVDLVFPVLHGKNGENGTLQGIFE
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
23 LAGIPVVGCDTLSSALCMDKDRAHKLVSLAGISVPKSVTFKRFNEEAAMKEIEANLTYPL
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
24 FIKPVRAGSSFGITKVIEKQELDAAIELAFEHDTEVIVEETINGFEVGCAVLGIDELIVG
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
25 RVDEIELSSGFFDYTEKYTLKSSKIYMPARIDAEAEKRIQEAAVTIYKALGCSGFSRVDM
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
26 FYTPSGEIVFNEVNTIPGFTSHSRYPNMMKGIGLSFSQMLDKLIGLYVE
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
27 >sul2_partial_3p_neg sul2 sulfonamide-resistant dihydropteroate synthase Sul2
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
28 SSNPDAAPVSSDTEIERIAPVLDALKADGIPVSLDSYQPATQAYALSRGVAYLNDIRGFP
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
29 DAAFYPQLAKSSAKLVVMHSVQDGQADRREAPAGDIMDHIAAFFDARIAALTGAGIKRNR
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
30 LVLDPGMGFFLGAAPETSLSVLARFDELRLRFDLPVLLSVSRKSFLRALTGRGPGDVGAA
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
31 TLAAELAAAAGGADFIRTHEPRPLRDGLAVLAALKETARIR
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
32 >blaTEM-internal_stop blaTEM TEM family class A beta-lactamase
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
33 HFRVALIPFFAAFCLPVFAHPETLVKVKDAEDQLGARVNYIELDLNSGKILESFRPEERF
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
34 PMMSTFKVLLCGAVLSCVDAGQEQLGRSIHYSQNDLVEYSPVTEKHLTDGMTLRELCSAA
3e93d920163b planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
estrain
parents:
diff changeset
35 ITMSDNTAANLLLTTIGGPKELTA