Mercurial > repos > estrain > amrfinderplus_db
comparison test-data/test_4/amrfinderplus_results.tsv @ 6:3e93d920163b draft
planemo upload commit 3773c71b3fac75f58b5af497e19d54dca0d81dfd
| author | estrain |
|---|---|
| date | Thu, 12 Mar 2026 20:38:44 +0000 |
| parents | |
| children |
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| 5:8c275a8fae9b | 6:3e93d920163b |
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| 1 Protein identifier Gene symbol Sequence name Scope Element type Element subtype Class Subclass Method Target length Reference sequence length % Coverage of reference sequence % Identity to reference sequence Alignment length Accession of closest sequence Name of closest sequence HMM id HMM description | |
| 2 IDOBJL_13105 optrA ABC-F type ribosomal protection protein OptrA core AMR AMR PHENICOL/OXAZOLIDINONE FLORFENICOL/OXAZOLIDINONE BLASTP 637 655 97.25 100.00 637 WP_063854496.1 ABC-F type ribosomal protection protein OptrA NA NA | |
| 3 IDOBJL_14770 aph(3')-IIIa aminoglycoside O-phosphotransferase APH(3')-IIIa core AMR AMR AMINOGLYCOSIDE AMIKACIN/KANAMYCIN BLASTP 264 264 100.00 99.62 264 WP_063841495.1 aminoglycoside O-phosphotransferase APH(3')-IIIa NA NA | |
| 4 IDOBJL_14775 sat4 streptothricin N-acetyltransferase Sat4 core AMR AMR STREPTOTHRICIN STREPTOTHRICIN BLASTP 180 180 100.00 99.44 180 WP_063854934.1 streptothricin N-acetyltransferase Sat4 NA NA | |
| 5 IDOBJL_14820 tet(M) tetracycline resistance ribosomal protection protein Tet(M) core AMR AMR TETRACYCLINE TETRACYCLINE BLASTP 639 639 100.00 99.84 639 WP_063856395.1 tetracycline resistance ribosomal protection protein Tet(M) NA NA | |
| 6 IDOBJL_14830 erm(B) 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) core AMR AMR MACROLIDE MACROLIDE BLASTP 245 245 100.00 99.59 245 WP_063844601.1 23S rRNA (adenine(2058)-N(6))-methyltransferase Erm(B) NA NA | |
| 7 IDOBJL_14880 tet(L) tetracycline efflux MFS transporter Tet(L) core AMR AMR TETRACYCLINE TETRACYCLINE BLASTP 458 458 100.00 99.78 458 WP_063856080.1 tetracycline efflux MFS transporter Tet(L) NA NA |