Mercurial > repos > estrain > data_manager_amrfinderplus

diff data_manager/data_manager_amrfinderplus.xml @ 0:2986b488a62b draft default tip

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planemo upload commit 6f89f1ec5ad85eb9c08c0d48c77b8f8eadbdcaff
author estrain
date Thu, 12 Mar 2026 19:41:57 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/data_manager/data_manager_amrfinderplus.xml	Thu Mar 12 19:41:57 2026 +0000
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+<tool id="data_manager_amrfinderplus" name="AMRFinderPlus Data Manger" tool_type="manage_data" version="4.2.5" profile="20.03">
+    <requirements>
+        <requirement type="package" version="4.2.5">ncbi-amrfinderplus</requirement>
+        <requirement type="package" version="3.10.6">python</requirement>
+    </requirements>
+    <command detect_errors="exit_code"><![CDATA[
+      python '$__tool_directory__/data_manager_amrfinderplus.py' '$output_file'
+    ]]></command>
+    <inputs>
+      <param name="amrdbname" type="text" value="latest" label="Release Version - Note: only latest release is supported"/>
+    </inputs>
+    <outputs>
+        <data name="output_file" format="data_manager_json"/>
+    </outputs>
+    <tests>
+        <test>
+        </test>
+    </tests>
+    <help>
+    </help>
+    <citations>
+    </citations>
+</tool>