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annotate test-data/test_database_versioned.loc.test @ 0:a7bd05df0bea draft default tip

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planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
author estrain
date Fri, 13 Mar 2026 12:06:00 +0000
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a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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1 # Tab separated with 5 columns:
a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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2 # - value (Galaxy records this in the Galaxy DB)
a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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3 # - name (Galaxy shows this in the UI)
a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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4 # - dbkey
a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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5 # - path (folder name containing the Kraken DB)
a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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6 # - db version (whether it is SGB of Metaphlan v4 or not)
a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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7 test-db-20210409 "Test Database" test-db ${__HERE__}/test-db SGB
a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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8 # the TOY DB should be called in tests with the hidden test parameter enables this will make Metaphlan
a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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9 # download the data to the JWD
a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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10 mpa_vJan21_TOY_CHOCOPhlAnSGB mpa_vJan21_TOY_CHOCOPhlAnSGB mpa_vJan21_TOY_CHOCOPhlAnSGB_202103 ./ SGB
a7bd05df0bea planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
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11 # mpa_vJun23_CHOCOPhlAnSGB_202403 mpa_vJun23_CHOCOPhlAnSGB_202403 mpa_vJun23_CHOCOPhlAnSGB_202403 ${__HERE__}/mpa_vJun23_CHOCOPhlAnSGB_202403/ SGB