Mercurial > repos > estrain > metaphlan_gt

diff macros.xml @ 0:a7bd05df0bea draft default tip

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planemo upload commit e485da3e1b9eb674a52948a00a3328c1a3cc5ffa
author estrain
date Fri, 13 Mar 2026 12:06:00 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/macros.xml	Fri Mar 13 12:06:00 2026 +0000
@@ -0,0 +1,23 @@
+<?xml version="1.0"?>
+<macros>
+    <token name="@TOOL_VERSION@">4.1.1</token>
+    <token name="@VERSION_SUFFIX@">0</token>
+    <token name="@PROFILE@">22.05</token>
+    <token name="@IDX_VERSION@">SGB</token>
+    <token name="@IDX_DATA_TABLE@">metaphlan_database_versioned</token>
+    <xml name="requirements">
+        <requirements>
+            <requirement type="package" version="@TOOL_VERSION@">metaphlan</requirement>
+        </requirements>
+    </xml>
+    <xml name="citations">
+        <citations>
+            <citation type="doi">10.7554/eLife.65088</citation>
+        </citations>
+    </xml>
+
+    <xml name="subsample_common">
+        <param argument="--mapping_subsampling" type="boolean" truevalue="--mapping_subsampling" falsevalue="" label="Subsampling on the mapping results" help="instead of on the reads"/>
+        <param argument="--subsampling_seed" type="integer" optional="true" label="Subsampling seed" help="No value: random"/>
+    </xml>
+</macros>