annotate amrfinderplus/test-data/2019-08-27.1/AMR_DNA-Campylobacter @ 5:b836150ca6aa

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author estrain
date Fri, 06 Mar 2020 10:58:39 -0500
parents 6cab26b67987
children
rev   line source
estrain@4 1 >NC_022347.1:1040292-1037381
estrain@4 2 aaaaaaggtaagctactaagagcgaatggtggatgccttgactggtaaaggcgatgaaggacgtactagactgcgataag
estrain@4 3 ctacggggagctgtcaagaagctttgatccgtagatttccgaatggggcaacccaatgtatagagatatacattacctat
estrain@4 4 ataggagcgaacgaggggaattgaaacatcttagtaccctcaggaaaagaaatcaatagagattgcgtcagtagcggcga
estrain@4 5 gcgaaagcgcaagagggcaaacccagtgcttgcactgggggttgtaggactgcaatgtgcaagaggtaagtttagcagaa
estrain@4 6 cattctggaaagtatagccatagagggtgatagtcccgtatgcgaaaaacaaaccttagctagcagtatcctgagtaggg
estrain@4 7 cgggacacgagaaatcctgtctgaagctgggtcgaccacgatccaaccctaaatactaataccagatcgatagtgcacaa
estrain@4 8 gtaccgtgagggaaaggtgaaaagaactgaggtgatcagagtgaaatagaacctgaaaccatttgcttacaatcattcag
estrain@4 9 agccctatgtagcaatacagggtgatggactgccttttgcataatgagcctgcgagttgtggtgtctggcaaggttaagc
estrain@4 10 aaacgcgaagccgtagcgaaagcgagtctgaatagggcgcttagtcagatgctgcagacccgaaacgaagtgatctatcc
estrain@4 11 atgagcaagttgaagctagtgtaagaactagtggaggactgaacccataggcgttgaaaagccccgggatgacttgtgga
estrain@4 12 taggggtgaaaggccaatcaaacttcgtgatagctggttctctccgaaatatatttaggtatagcgttgtgtcgtaatat
estrain@4 13 aagggggtagagcactgaatgggctagggcatacaccaatgtaccaaaccctatcaaactccgaataccttatatgtaat
estrain@4 14 cacagcagtcaggcggcgagtgataaaatccgtcgtcaagagggaaacaacccagactaccagctaaggtccctaaatct
estrain@4 15 tacttaagtggaaaacgatgtgaagttacttaaacaaccaggaggttggcttagaagcagccatcctttaaagaaagcgt
estrain@4 16 aatagctcactggtctagtgattttgcgcggaaaatataacggggctaaagtaagtaccgaagctgtagacttgcgcaca
estrain@4 17 acttagattatttaagtttagaatatgagaaactaagttatatgtttagttatatttttactgatttttatagagtaaag
estrain@4 18 atagaaataaaacttagtaaaatcagtaaaaatattcttagactaaagttaagtagtttaagttgtgtgcaagtggtagg
estrain@4 19 agagcgttctatttgcgtcgaaggtataccggtaaggagtgctggagcgaatagaagtgagcatgcaggcatgagtagcg
estrain@4 20 ataattaatgtgagaatcattaacgccgtaaacccaaggtttcctacgcgatgctcgtcatcgtagggttagtcgggtcc
estrain@4 21 taagtcgagtccgaaaggggtagacgatggcaaattggttaatattccaataccaacattagtgtgcgatggaaggacgc
estrain@4 22 ttagggctaagggggctagcggatggaagtgctagtctaaggtcgtaggaggttatacaggcaaatccgtataacaatac
estrain@4 23 tccgagaactgaaaggctttttgaagtcttcggatggatagaagaacccctgatgccgtcgagccaagaaaagtttctaa
estrain@4 24 gtttagctaatgttgcccgtaccgtaaaccgacacaggtgggtgggatgagtattctaaggcgcgtggaagaactctctt
estrain@4 25 taaggaactctgcaaaatagcaccgtatcttcggtataaggtgtggttcgcttcgtattaggatttactccgaaagcgaa
estrain@4 26 gaaacttacaacaaagagtccctcccgactgtttaccaaaaacacagcactctgctaactcgtaagaggatgtatagggt
estrain@4 27 gtgacgcctgcccggtgctcgaaggttaattgatggggttagcattagcgaagctcttgatcgaagcccgagtaaacggc
estrain@4 28 ggccgtaactataacggtcctaaggtagcgaaattccttgtcggttaaataccgacctgcatgaatggcgtaacgagatg
estrain@4 29 ggagctgtctcaaagagggatccagtgaaattgtagtggaggtgaaaattcctcctacccgcggcaagacggaaagaccc
estrain@4 30 cgtggacctttactacagcttgacactgctatttggataagaatgtgcaggataggtgggaggctttgagtatatgacgc
estrain@4 31 cagttgtatatgagccattgttgagataccactctttcttatttgggtagctaaccagcttgagttatcctcaagtggga
estrain@4 32 caatgtctggtgggtagtttgactggggcggtcgcctcccaaataataacggaggcttacaaaggttggctcagaacggt
estrain@4 33 tggaaatcgttcgtagagtataaaggtataagccagcttaactgcaagacatacaagtcaagcagagacgaaagtcggtc
estrain@4 34 ttagtgatccggtggttctgcgtggaagggccatcgctcaaaggataaaaggtaccccggggataacaggctgatctccc
estrain@4 35 ccaagagctcacatcgacggggaggtttggcacctcgatgtcggctcatcgcatcctggggctggagcaggtcccaaggg
estrain@4 36 tatggctgttcgccatttaaagcggtacgcgagctgggttcagaacgtcgtgagacagttcggtccctatctgccgtggg
estrain@4 37 cgtaagaagattgaagagatttgaccctagtacgagaggaccgggttgaacaaaccactggtgtagctgttgttctgcca
estrain@4 38 agagcatcgcagcgtagctaagtttggaaagg
estrain@4 39 >NC_002163.1:396449-399360
estrain@4 40 agctactaagagcgaatggtggatgccttgactggtaaaggcgatgaaggacgtactagactgcgataagctacggggag
estrain@4 41 ctgtcaagaagctttgatccgtagatttccgaatggggcaacccaatgtatagagatatacattacctatataggagcga
estrain@4 42 acgaggggaattgaaacatcttagtaccctcaggaaaagaaatcaatagagattgcgtcagtagcggcgagcgaaagcgc
estrain@4 43 aagagggcaaacccagtgcttgcactgggggttgtaggactgcaatgtgcaagagctgagtttagcagaacattctggaa
estrain@4 44 agtatagccatagagggtgatagtcccgtatgcgaaaaacaaagcttagctagcagtatcctgagtagggcgggacacga
estrain@4 45 ggaatcctgtctgaatccgggtcgaccacgatccaaccctaaatactaataccagatcgatagtgcacaagtaccgtgag
estrain@4 46 ggaaaggtgaaaagaactgaggtgatcagagtgaaatagaacctgaaaccatttgcttacaatcattcagagcactatgt
estrain@4 47 agcaatacagtgtgatggactgccttttgcataatgagcctgcgagttgtggtgtctggcaaggttaagcaaacgcgaag
estrain@4 48 ccgtagcgaaagcgagtctgaatagggcgcttagtcagatgctgcagacccgaaacgaagtgatctatccatgagcaagt
estrain@4 49 tgaagctagtgtaagaactagtggaggactgaacccataggcgttgaaaagccccgggatgacttgtggataggggtgaa
estrain@4 50 aggccaatcaaacttcgtgatagctggttctctccgaaatatatttaggtatagcgttgtgtcgtaatataagggggtag
estrain@4 51 agcactgaatgggctagggcatacaccaatgtaccaaaccctatcaaactccgaataccttatatgtaatcacagcagtc
estrain@4 52 aggcggcgagtgataaaatccgtcgtcaagagggaaacaacccagactaccagctaaggtccctaaatcttacttaagtg
estrain@4 53 gaaaacgatgtgaagttacttaaacaaccaggaggttggcttagaagcagccatcctttaaagaaagcgtaatagctcac
estrain@4 54 tggtctagtgattttgcgcggaaaatataacggggctaaagtaagtaccgaagctgtagacttagtttactaagtggtag
estrain@4 55 gagagcgttctatttgcgtcgaaggtataccggtaaggagtgctggagcgaatagaagtgagcatgcaggcatgagtagc
estrain@4 56 gataattaatgtgagaatcattaacgccgtaaacccaaggtttcctacgcgatgctcgtcatcgtagggttagtcgggtc
estrain@4 57 ctaagtcgagtccgaaaggggtagacgatggcaaattggttaatattccaataccaacattagtgtgcgatggaaggacg
estrain@4 58 cttagggctaagggggctagcggatggaagtgctagtctaaggtcgtaggaggttatacaggcaaatccgtataacaata
estrain@4 59 ctccgagaactgaaaggctttttgaagtcttcggatggatagaagaacccctgatgccgtcgagccaagaaaagtttcta
estrain@4 60 agtttagctaatgttgcccgtaccgtaaaccgacacaggtgggtgggatgagtattctaaggcgcgtggaagaactctct
estrain@4 61 ttaaggaactctgcaaaatagcaccgtatcttcggtataaggtgtggttagctttgtattaggatttactctgaaagcaa
estrain@4 62 ggaaacttacaacaaagagtccctcccgactgtttaccaaaaacacagcactctgctaactcgtaagaggatgtataggg
estrain@4 63 tgtgacgcctgcccggtgctcgaaggttaattgatggggttagcattagcgaagctcttgatcgaagcccgagtaaacgg
estrain@4 64 cggccgtaactataacggtcctaaggtagcgaaattccttgtcggttaaataccgacctgcatgaatggcgtaacgagat
estrain@4 65 gggagctgtctcaaagagggatccagtgaaattgtagtggaggtgaaaattcctcctacccgcggcaagacggaaagacc
estrain@4 66 ccgtggacctttactacagcttgacactgctacttggataagaatgtgcaggataggtgggaggctttgagtatatgacg
estrain@4 67 ccagttgtatatgagccattgttgagataccactctttcttatttgggtagctaaccagcttgagttatcctcaagtggg
estrain@4 68 acaatgtctggtgggtagtttgactggggcggtcgcctcccaaataataacggaggcttacaaaggttggctcagaacgg
estrain@4 69 ttggaaatcgttcgtagagtataaaggtataagccagcttaactgcaagacatacaagtcaagcagagacgaaagtcggt
estrain@4 70 cttagtgatccggtggttctgtgtggaagggccatcgctcaaaggataaaaggtaccccggggataacaggctgatctcc
estrain@4 71 cccaagagctcacatcgacggggaggtttggcacctcgatgtcggctcatcgcatcctggggctggagcaggtcccaagg
estrain@4 72 gtatggctgttcgccatttaaagcggtacgcgagctgggttcagaacgtcgtgagacagttcggtccctatctgccgtgg
estrain@4 73 gcgtaagaagattgaagagatttgaccctagtacgagaggaccgggttgaacaaaccactggtgtagctgttgttctgcc
estrain@4 74 aagagcatcgcagcgtagctaagtttggaaaggataaacgctgaaagcatctaagcgtgaagccaactctaagatgaatc
estrain@4 75 ttctctaagctctctagaagactactagtttgataggctgggtgtgtaatggatgaaagtcctttagctgaccagtacta
estrain@4 76 atagagcgtttggcttatctttaataaagcat