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1 ---------------------------------------------------------------------
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2 Changes included in 2019-08-27.1
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3 ---------------------------------------------------------------------
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4
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5 This release includes a new database file to correspond with AMRFinderPlus
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6 version 3.1 that includes information for blacklisting of a few "plus" proteins
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7 common in some organisms that are interesting when found in others. This
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8 release also includes the usual new AMR genes and alleles; the fixing of some
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9 typos; removal of a redundant point mutation reference sequence; and the
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10 addition, reoorganization, and renaming of some "plus" genes.
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11
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12 - Reference Gene Catalog protein and allele changes:
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13
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14 Total in prev: 6110
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15 Total in release: 6274
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16 Removed: 18
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17 Added: 182
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18 Changed: 33
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19 Removed emrD3 WP_000850833.1
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20 Removed blaOXA-671 WP_016660101.1
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21 Removed arsB-mob WP_063116263.1
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estrain@4
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22 Removed gyrA_A67S WP_001281242.1
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23 Removed gyrA_A84P WP_001281242.1
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24 Removed gyrA_D87G WP_001281242.1
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estrain@4
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25 Removed gyrA_D87H WP_001281242.1
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estrain@4
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26 Removed gyrA_D87N WP_001281242.1
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estrain@4
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27 Removed gyrA_D87V WP_001281242.1
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28 Removed gyrA_D87Y WP_001281242.1
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29 Removed gyrA_G81C WP_001281242.1
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30 Removed gyrA_H80P WP_001281242.1
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estrain@4
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31 Removed gyrA_N57K WP_001281242.1
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estrain@4
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32 Removed gyrA_Q106H WP_001281242.1
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33 Removed gyrA_S83F WP_001281242.1
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34 Removed gyrA_S83I WP_001281242.1
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estrain@4
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35 Removed gyrA_S83L WP_001281242.1
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36 Removed gyrA_S83W WP_001281242.1
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37 Added arsB AAA21095.1
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38 Added arsC AAA21096.1
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estrain@4
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39 Added arsR AAA25636.1
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estrain@4
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40 Added arsB AAA25637.1
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estrain@4
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41 Added copC AAA25808.1
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estrain@4
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42 Added arsR AAA27587.1
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43 Added arsB AAA27588.1
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44 Added arsR AAB09624.1
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45 Added arsC AAB09628.1
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46 Added arsC AAB42203.1
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47 Added arsB AAB42204.1
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48 Added ipaH9.8 AAC23714.1
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49 Added pic AAD23953.1
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50 Added efa1 AAD49229.2
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51 Added iha AAG55323.1
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52 Added stb AAK29747.1
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53 Added efa1 AAL57562.1
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54 Added pic AAN78833.1
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55 Added iha AAN82058.1
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56 Added cif AAQ07241.1
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57 Added iha AAT68782.1
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58 Added efa1 AAV91321.1
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59 Added sab AAZ76500.1
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60 Added senB AAZ89288.1
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61 Added iha ABB17254.1
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62 Added emrD3 ABQ18953.1
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63 Added kdeA ABR76310.1
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64 Added lmrC ABX00624.1
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65 Added iha ACB20136.1
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66 Added iha ACD08748.1
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67 Added amvA ACQ82816.1
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68 Added ipaH4 ADA74402.1
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69 Added iha ADI47068.1
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70 Added iha ADN47767.1
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71 Added arsR ADZ44504.1
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72 Added iha AEQ14190.1
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73 Added stb AET14866.1
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74 Added arsR AET17094.1
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75 Added pic AFS72825.1
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76 Added iha AFS75030.1
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77 Added asr BAA15331.2
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78 Added arsB BAA24823.1
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79 Added arsC BAA24824.1
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80 Added espK BAB34991.1
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81 Added fieF BAB89353.1
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82 Added fieF BAE77395.1
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83 Added arsR BAE77793.1
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84 Added cif BAG66370.1
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85 Added iha BAI27255.1
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86 Added efa1 BAI32294.1
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87 Added iha CAC39288.1
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88 Added efa1 CAC81883.1
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89 Added efa1 CAD30848.1
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90 Added stb CAD87835.1
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91 Added iha CAE55782.1
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92 Added efa1 CAI43818.1
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93 Added hlyA-alpha CAQ77251.1
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94 Added iha CAR09712.2
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95 Added pic CAU99295.1
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96 Added iha CBW53086.1
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97 Added ipaH5 EID63069.1
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98 Added fosB WP_000920239.1
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99 Added dfrA36 WP_000949574.1
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100 Added mphM WP_001041372.1
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101 Added cfr(B) WP_002405682.1
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102 Added mphK WP_003246254.1
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103 Added blaPDC-374 WP_003454242.1
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104 Added tet(56) WP_003635403.1
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105 Added blaCDD-1 WP_009901927.1
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106 Added mphH WP_015776248.1
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107 Added erm(49) WP_019728092.1
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108 Added blaCDD-2 WP_021361759.1
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109 Added mphN WP_024127776.1
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110 Added tet(X) WP_024160783.1
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111 Added blaPDC-361 WP_031638595.1
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112 Added tet(G) WP_032489471.1
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113 Added vga(E) WP_032495718.1
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114 Added blaACT-72 WP_045895620.1
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115 Added blaACT-70 WP_047364854.1
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116 Added blaACT-69 WP_048209719.1
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117 Added ble WP_063842967.1
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estrain@4
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118 Added blaOXA-671 WP_081401608.1
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119 Added icr-Mo WP_082741435.1
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120 Added blaOXA-653 WP_087554513.1
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121 Added tet(X) WP_094309310.1
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122 Added blaMOX-13 WP_096807444.1
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estrain@4
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123 Added blaFOX-15 WP_096807445.1
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124 Added blaCMY-157 WP_096807446.1
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125 Added blaIMP-69 WP_099156051.1
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126 Added blaPDC-249 WP_104009845.1
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127 Added blaACT-58 WP_111965422.1
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128 Added blaACT-62 WP_111967096.1
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129 Added blaACT-63 WP_112780466.1
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130 Added blaOXA-727 WP_114272532.1
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131 Added blaOXA-731 WP_116786833.1
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132 Added blaOXA-728 WP_116786835.1
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estrain@4
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133 Added blaPDC-367 WP_121286063.1
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134 Added blaPDC-364 WP_121347819.1
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estrain@4
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135 Added blaFLC-1 WP_123061077.1
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estrain@4
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136 Added blaPDC-371 WP_126118969.1
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137 Added blaPDC-353 WP_128550481.1
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138 Added blaVIM-67 WP_142875125.1
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139 Added blaADC-196 WP_145850033.1
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140 Added blaAQU WP_148044401.1
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141 Added blaAQU WP_148044402.1
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estrain@4
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142 Added dfrA29 WP_148044403.1
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143 Added blaCAM-1 WP_148044405.1
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144 Added blaCMY-165 WP_148044406.1
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estrain@4
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145 Added blaCMY-166 WP_148044407.1
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estrain@4
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146 Added blaCMY-167 WP_148044408.1
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estrain@4
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147 Added blaCTX-M-227 WP_148044409.1
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estrain@4
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148 Added blaCTX-M-228 WP_148044410.1
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estrain@4
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149 Added blaCTX-M-229 WP_148044411.1
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estrain@4
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150 Added blaDHA-29 WP_148044412.1
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estrain@4
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151 Added blaGES-42 WP_148044413.1
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152 Added blaGES-43 WP_148044414.1
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estrain@4
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153 Added blaIMP-82 WP_148044416.1
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154 Added blaIMP-83 WP_148044417.1
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estrain@4
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155 Added blaIMP-84 WP_148044418.1
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estrain@4
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156 Added blaKPC-41 WP_148044419.1
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estrain@4
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157 Added blaKPC-45 WP_148044420.1
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158 Added blaKPC-46 WP_148044421.1
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estrain@4
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159 Added blaOXA-835 WP_148044422.1
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estrain@4
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160 Added blaOXA-836 WP_148044423.1
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estrain@4
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161 Added blaPAU-1 WP_148044424.1
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estrain@4
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162 Added blaPDC-196 WP_148044425.1
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163 Added blaPDC-334 WP_148044426.1
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164 Added blaPDC-335 WP_148044427.1
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165 Added blaPDC-336 WP_148044428.1
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166 Added blaPDC-337 WP_148044429.1
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167 Added blaPDC-338 WP_148044430.1
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estrain@4
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168 Added blaPDC-339 WP_148044431.1
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169 Added blaPDC-340 WP_148044432.1
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estrain@4
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170 Added blaPDC-341 WP_148044433.1
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estrain@4
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171 Added blaPDC-342 WP_148044434.1
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estrain@4
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172 Added blaPDC-343 WP_148044435.1
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estrain@4
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173 Added blaPDC-344 WP_148044436.1
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estrain@4
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174 Added blaPDC-345 WP_148044437.1
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estrain@4
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175 Added blaPDC-346 WP_148044438.1
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176 Added blaPDC-347 WP_148044439.1
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estrain@4
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177 Added blaPDC-348 WP_148044440.1
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178 Added blaPDC-349 WP_148044441.1
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179 Added blaPDC-350 WP_148044442.1
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180 Added blaPDC-351 WP_148044443.1
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181 Added blaPDC-352 WP_148044444.1
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estrain@4
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182 Added blaPDC-354 WP_148044445.1
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estrain@4
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183 Added blaPDC-355 WP_148044446.1
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184 Added blaPDC-356 WP_148044447.1
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185 Added blaPDC-357 WP_148044448.1
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186 Added blaPDC-358 WP_148044449.1
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estrain@4
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187 Added blaPDC-359 WP_148044450.1
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estrain@4
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188 Added blaPDC-360 WP_148044451.1
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estrain@4
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189 Added blaPDC-362 WP_148044452.1
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estrain@4
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190 Added blaPDC-363 WP_148044453.1
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estrain@4
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191 Added blaPDC-365 WP_148044454.1
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estrain@4
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192 Added blaPDC-366 WP_148044455.1
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estrain@4
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193 Added blaPDC-368 WP_148044456.1
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estrain@4
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194 Added blaPDC-369 WP_148044457.1
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estrain@4
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195 Added blaPDC-370 WP_148044458.1
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estrain@4
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196 Added blaPDC-372 WP_148044459.1
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197 Added blaPDC-373 WP_148044460.1
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198 Added blaPDC-375 WP_148044461.1
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199 Added blaPDC-376 WP_148044462.1
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estrain@4
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200 Added blaPDC-377 WP_148044463.1
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estrain@4
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201 Added blaPDC-378 WP_148044464.1
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estrain@4
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202 Added blaPDC-379 WP_148044465.1
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estrain@4
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203 Added blaPDC-380 WP_148044466.1
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estrain@4
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204 Added blaPDC-381 WP_148044467.1
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205 Added blaPDC-382 WP_148044468.1
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206 Added blaPDC-383 WP_148044469.1
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estrain@4
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207 Added blaPFM-1 WP_148044470.1
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208 Added blaTEM-241 WP_148044472.1
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209 Added blaTEM-242 WP_148044473.1
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210 Added blaTEM-39 WP_148044474.1
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211 Added blaVEB-22 WP_148044475.1
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212 Added blaVIM-68 WP_148044476.1
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estrain@4
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213 Added mcr-1.22 WP_148044477.1
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214 Added mcr-5.4 WP_148044478.1
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215 Added blaOXA-837 WP_148281568.1
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estrain@4
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216 Added gyrA_H80P WP_001281243.1
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217 Added gyrA_N57K WP_001281243.1
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218 Added gyrA_S83F WP_001281243.1
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219 Changes:
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220 faeG AAA24032.1
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221 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
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estrain@4
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222 faeG AAA24035.1
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estrain@4
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223 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
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estrain@4
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224 faeG AAA24390.1
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estrain@4
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225 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
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estrain@4
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226 nccX AAA65102.1
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227 subclass METAL ->
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228 merB AAA88369.1
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229 class MECURY -> MERCURY
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230 subclass ORGANOMECURY -> ORGANOMERCURY
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estrain@4
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231 merC AAC33908.1
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232 class MECURY -> MERCURY
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233 subclass ORGANOMECURY -> ORGANOMERCURY
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estrain@4
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234 faeG AAC34727.1
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estrain@4
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235 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
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estrain@4
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236 merB AAC38230.1
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237 class MECURY -> MERCURY
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estrain@4
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238 subclass ORGANOMECURY -> ORGANOMERCURY
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estrain@4
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239 merC AAC38233.1
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estrain@4
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240 class MECURY -> MERCURY
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estrain@4
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241 subclass ORGANOMECURY -> ORGANOMERCURY
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estrain@4
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242 ipaH2 AAN43435.1
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estrain@4
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243 gene_family ipaH9.8 -> ipaH2
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estrain@4
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244 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
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estrain@4
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245 mreA AAN68577.1
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estrain@4
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246 subclass METAL ->
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estrain@4
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247 ipaH2 AAZ87985.1
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estrain@4
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248 gene_family ipaH9.8 -> ipaH2
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estrain@4
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249 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
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estrain@4
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250 ipaH3 ABB62096.1
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estrain@4
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251 gene_family ipaH9.8 -> ipaH3
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estrain@4
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252 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH3
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estrain@4
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253 ipaH2 ABB62098.1
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estrain@4
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254 gene_family ipaH9.8 -> ipaH2
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estrain@4
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255 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
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estrain@4
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256 ipaH2 ABB66229.1
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estrain@4
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257 gene_family ipaH9.8 -> ipaH2
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estrain@4
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258 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
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estrain@4
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259 ipaH1 ABF02983.1
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estrain@4
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260 gene_family ipaH9.8 -> ipaH1
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estrain@4
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261 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH1/H6
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estrain@4
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262 ipaH2 ABF04028.1
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estrain@4
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263 gene_family ipaH9.8 -> ipaH2
|
|
estrain@4
|
264 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
|
|
estrain@4
|
265 faeG ACB72721.1
|
|
estrain@4
|
266 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
|
|
estrain@4
|
267 ipaH2 ACD09076.1
|
|
estrain@4
|
268 gene_family ipaH9.8 -> ipaH2
|
|
estrain@4
|
269 product_name T3SS effector E3 ubiquitin-protein ligase IpaH9.8 -> T3SS effector E3 ubiquitin-protein ligase IpaH2
|
|
estrain@4
|
270 faeG AFH14350.1
|
|
estrain@4
|
271 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
|
|
estrain@4
|
272 merC BAA14138.2
|
|
estrain@4
|
273 class MECURY -> MERCURY
|
|
estrain@4
|
274 subclass ORGANOMECURY -> ORGANOMERCURY
|
|
estrain@4
|
275 merB BAA20338.2
|
|
estrain@4
|
276 class MECURY -> MERCURY
|
|
estrain@4
|
277 subclass ORGANOMECURY -> ORGANOMERCURY
|
|
estrain@4
|
278 merG BAA23166.1
|
|
estrain@4
|
279 class MECURY -> MERCURY
|
|
estrain@4
|
280 merB BAB47641.1
|
|
estrain@4
|
281 class MECURY -> MERCURY
|
|
estrain@4
|
282 subclass ORGANOMECURY -> ORGANOMERCURY
|
|
estrain@4
|
283 merB CAC86907.1
|
|
estrain@4
|
284 class MECURY -> MERCURY
|
|
estrain@4
|
285 subclass ORGANOMECURY -> ORGANOMERCURY
|
|
estrain@4
|
286 faeG CAE82650.1
|
|
estrain@4
|
287 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
|
|
estrain@4
|
288 faeG CAE82653.1
|
|
estrain@4
|
289 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
|
|
estrain@4
|
290 faeG CAE82670.1
|
|
estrain@4
|
291 product_name F4 fimbrial adhesin subunit FaeG -> F4 (K88) fimbrial adhesin subunit FaeG
|
|
estrain@4
|
292 mphL WP_002047670.1
|
|
estrain@4
|
293 gene_family mph(B) -> mphL
|
|
estrain@4
|
294 product_name Mph(B) family macrolide 2'-phosphotransferase -> macrolide 2'-phosphotransferase MphL
|
|
estrain@4
|
295 poxtA WP_002415638.1
|
|
estrain@4
|
296 genbank_cds_start 1856 -> 57639
|
|
estrain@4
|
297 genbank_cds_stop 3484 -> 59267
|
|
estrain@4
|
298 genbank_nucleotide_accession MF095097.1 -> MH746818.1
|
|
estrain@4
|
299 mcr-3.22 WP_094308975.1
|
|
estrain@4
|
300 refseq_nucleotide_accession NG_060581.1 -> NG_060581.2
|
|
estrain@4
|
301 blaPDC-259 WP_109791193.1
|
|
estrain@4
|
302 genbank_nucleotide_accession MH243333.1 -> MH243333.2
|
|
estrain@4
|
303 refseq_nucleotide_accession NG_057591.1 -> NG_057591.2
|
|
estrain@4
|
304 blaPDC-265 WP_109791199.1
|
|
estrain@4
|
305 genbank_nucleotide_accession MH243339.1 -> MH243339.2
|
|
estrain@4
|
306 refseq_nucleotide_accession NG_057597.1 -> NG_057597.2
|
|
estrain@4
|
307
|
|
estrain@4
|
308 - HMM library Changes:
|
|
estrain@4
|
309 Total: Added 6
|
|
estrain@4
|
310 Total: Prev. Release 603
|
|
estrain@4
|
311 Total: Removed 1
|
|
estrain@4
|
312 Total: This Release 608
|
|
estrain@4
|
313 HMM Removed: NF000274.2 PF04439
|
|
estrain@4
|
314 HMM Added: NF007456.1 PRK10026.1
|
|
estrain@4
|
315 HMM Added: NF033636.1 acid_shock_Asr
|
|
estrain@4
|
316 HMM Added: NF033877.0 arsB_Sta_pI258
|
|
estrain@4
|
317 HMM Added: NF033895.1 blaCAM
|
|
estrain@4
|
318 HMM Added: NF033929.1 blaAXC
|
|
estrain@4
|
319 HMM Added: NF033933.0 fosA8
|
|
estrain@4
|
320
|
|
estrain@4
|
321 - Protein family changes:
|
|
estrain@4
|
322 Total: Added 47
|
|
estrain@4
|
323 Total: Prev. Release 1454
|
|
estrain@4
|
324 Total: Removed 1
|
|
estrain@4
|
325 Total: This Release 1500
|
|
estrain@4
|
326 Family Removed: - ubiq_IpaH3
|
|
estrain@4
|
327 Family Added: - ACID
|
|
estrain@4
|
328 Family Added: - CDF_efflux
|
|
estrain@4
|
329 Family Added: - amvA
|
|
estrain@4
|
330 Family Added: NF033877.0 arsB_pI258
|
|
estrain@4
|
331 Family Added: - arsB_pKW301
|
|
estrain@4
|
332 Family Added: - arsB_pYV
|
|
estrain@4
|
333 Family Added: NF007456.1 arsC_gluta
|
|
estrain@4
|
334 Family Added: - arsR
|
|
estrain@4
|
335 Family Added: - arsR_K-12
|
|
estrain@4
|
336 Family Added: - arsR_R46
|
|
estrain@4
|
337 Family Added: - arsR_pI258
|
|
estrain@4
|
338 Family Added: - arsR_pKW301
|
|
estrain@4
|
339 Family Added: - arsR_pSX267
|
|
estrain@4
|
340 Family Added: - arsR_pYV
|
|
estrain@4
|
341 Family Added: NF033636.1 asr
|
|
estrain@4
|
342 Family Added: NF033929.1 blaAXC
|
|
estrain@4
|
343 Family Added: NF033895.1 blaCAM
|
|
estrain@4
|
344 Family Added: - blaPFM
|
|
estrain@4
|
345 Family Added: - cif
|
|
estrain@4
|
346 Family Added: - copC_Psyr
|
|
estrain@4
|
347 Family Added: - dfrA29
|
|
estrain@4
|
348 Family Added: - efa1
|
|
estrain@4
|
349 Family Added: - erm(49)
|
|
estrain@4
|
350 Family Added: - espK
|
|
estrain@4
|
351 Family Added: - fieF
|
|
estrain@4
|
352 Family Added: NF033933.0 fosA8
|
|
estrain@4
|
353 Family Added: - hlyA-alpha
|
|
estrain@4
|
354 Family Added: - icr-Mo
|
|
estrain@4
|
355 Family Added: - iha
|
|
estrain@4
|
356 Family Added: - ipaH1
|
|
estrain@4
|
357 Family Added: - ipaH2
|
|
estrain@4
|
358 Family Added: - ipaH3
|
|
estrain@4
|
359 Family Added: - ipaH4
|
|
estrain@4
|
360 Family Added: - ipaH5
|
|
estrain@4
|
361 Family Added: - ipa_gen
|
|
estrain@4
|
362 Family Added: - kdeA
|
|
estrain@4
|
363 Family Added: - lmrC_abcf
|
|
estrain@4
|
364 Family Added: - mphH
|
|
estrain@4
|
365 Family Added: - mphK
|
|
estrain@4
|
366 Family Added: - mphL
|
|
estrain@4
|
367 Family Added: - mphM
|
|
estrain@4
|
368 Family Added: - mphN
|
|
estrain@4
|
369 Family Added: - pic_auto
|
|
estrain@4
|
370 Family Added: - sab
|
|
estrain@4
|
371 Family Added: - senB
|
|
estrain@4
|
372 Family Added: - stb
|
|
estrain@4
|
373 Family Added: - tet(56)
|
|
estrain@4
|
374 Family Changed: NF000274.2 ant6_gen updated to - ant6_gen
|
|
estrain@4
|
375
|
|
estrain@4
|
376 ---------------------------------------------------------------------
|
|
estrain@4
|
377 Changes included in 2019-07-10.1
|
|
estrain@4
|
378 ---------------------------------------------------------------------
|
|
estrain@4
|
379
|
|
estrain@4
|
380 New alleles and sequences were added, a few product names were made more
|
|
estrain@4
|
381 specific as more phenotype information became available. Cleanup of the
|
|
estrain@4
|
382 database caused some families and HMMs not used by AMRFinderPlus to be removed.
|
|
estrain@4
|
383
|
|
estrain@4
|
384 - Protein changes:
|
|
estrain@4
|
385 Total: Added 57
|
|
estrain@4
|
386 Total: Prev. Release 5757
|
|
estrain@4
|
387 Total: Removed 3
|
|
estrain@4
|
388 Total: This Release 5811
|
|
estrain@4
|
389 Protein Removed: WP_029728367.1 blaB BlaB_family_subclass_B1_metallo-beta-lactamase
|
|
estrain@4
|
390 Protein Removed: WP_063842622.1 blaB BlaB_family_subclass_B1_metallo-beta-lactamase
|
|
estrain@4
|
391 Protein Removed: WP_063842629.1 blaGOB GOB_family_subclass_B3_metallo-beta-lactamase
|
|
estrain@4
|
392 Protein Added: AAA21095.1 arsB_R773 arsenite_efflux_transporter_membrane_subunit_ArsB
|
|
estrain@4
|
393 Protein Added: ABQ18953.1 emrD3 multidrug_efflux_MFS_transporter_EmrD-3
|
|
estrain@4
|
394 Protein Added: WP_000850833.1 emrD3 multidrug_efflux_MFS_transporter_EmrD-3
|
|
estrain@4
|
395 Protein Added: WP_010446567.1 tet(B) tetracycline_efflux_MFS_transporter_Tet(B)
|
|
estrain@4
|
396 Protein Added: WP_039902635.1 blaOXA-134_like OXA-134_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-646
|
|
estrain@4
|
397 Protein Added: WP_063116263.1 arsB_R773 arsenite_efflux_transporter_membrane_subunit_ArsB
|
|
estrain@4
|
398 Protein Added: WP_063844329.1 dfrA12 trimethoprim-resistant_dihydrofolate_reductase_DfrA12
|
|
estrain@4
|
399 Protein Added: WP_063856066.1 tet(B) tetracycline_efflux_MFS_transporter_Tet(B)
|
|
estrain@4
|
400 Protein Added: WP_063856068.1 tet(B) tetracycline_efflux_MFS_transporter_Tet(B)
|
|
estrain@4
|
401 Protein Added: WP_070342370.1 dfrA7 trimethoprim-resistant_dihydrofolate_reductase_DfrA7
|
|
estrain@4
|
402 Protein Added: WP_071593205.1 aadA1bt ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA1bt
|
|
estrain@4
|
403 Protein Added: WP_071593208.1 aadA1bt ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA1bt
|
|
estrain@4
|
404 Protein Added: WP_086264536.1 blaOXA-213_like OXA-213_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-832
|
|
estrain@4
|
405 Protein Added: WP_094323230.1 mcr-2 phosphoethanolamine--lipid_A_transferase_MCR-2.3
|
|
estrain@4
|
406 Protein Added: WP_110174956.1 blaTEM class_A_beta-lactamase_TEM-235
|
|
estrain@4
|
407 Protein Added: WP_125052736.1 blaOXA-51_like OXA-51_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-834
|
|
estrain@4
|
408 Protein Added: WP_129336087.1 mcr-1 phosphoethanolamine--lipid_A_transferase_MCR-1.19
|
|
estrain@4
|
409 Protein Added: WP_135350920.1 blaGES class_A_beta-lactamase_GES-41
|
|
estrain@4
|
410 Protein Added: WP_140423191.1 aac(6')-Ib AAC(6')-Ib_family_aminoglycoside_6'-N-acetyltransferase
|
|
estrain@4
|
411 Protein Added: WP_140423278.1 aadA1 ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA1
|
|
estrain@4
|
412 Protein Added: WP_140423279.1 aadA2 ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA2
|
|
estrain@4
|
413 Protein Added: WP_140423280.1 aadA2 ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA2
|
|
estrain@4
|
414 Protein Added: WP_140423281.1 aadA2 ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA2
|
|
estrain@4
|
415 Protein Added: WP_140423282.1 aadA5 ANT(3'')-Ia_family_aminoglycoside_nucleotidyltransferase_AadA5
|
|
estrain@4
|
416 Protein Added: WP_140423283.1 dfrA1 trimethoprim-resistant_dihydrofolate_reductase_DfrA1
|
|
estrain@4
|
417 Protein Added: WP_140423284.1 dfrA12 trimethoprim-resistant_dihydrofolate_reductase_DfrA12
|
|
estrain@4
|
418 Protein Added: WP_140423285.1 dfrA17 trimethoprim-resistant_dihydrofolate_reductase_DfrA17
|
|
estrain@4
|
419 Protein Added: WP_140423286.1 dfrA17 trimethoprim-resistant_dihydrofolate_reductase_DfrA17
|
|
estrain@4
|
420 Protein Added: WP_140423287.1 dfrA17 trimethoprim-resistant_dihydrofolate_reductase_DfrA17
|
|
estrain@4
|
421 Protein Added: WP_140423305.1 blaADC class_C_beta-lactamase_ADC-195
|
|
estrain@4
|
422 Protein Added: WP_140423306.1 blaB subclass_B1_metallo-beta-lactamase_BlaB-15
|
|
estrain@4
|
423 Protein Added: WP_140423307.1 blaCMY class_C_beta-lactamase_CMY-164
|
|
estrain@4
|
424 Protein Added: WP_140423308.1 blaFRI carbapenem-hydrolyzing_class_A_beta-lactamase_FRI-8
|
|
estrain@4
|
425 Protein Added: WP_140423309.1 blaFRI carbapenem-hydrolyzing_class_A_beta-lactamase_FRI-9
|
|
estrain@4
|
426 Protein Added: WP_140423310.1 blaIMI carbapenem-hydrolyzing_class_A_beta-lactamase_IMI-19
|
|
estrain@4
|
427 Protein Added: WP_140423311.1 blaKPC carbapenem-hydrolyzing_class_A_beta-lactamase_KPC-44
|
|
estrain@4
|
428 Protein Added: WP_140423312.1 blaOXA-211_like OXA-211_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-643
|
|
estrain@4
|
429 Protein Added: WP_140423313.1 blaOXA-211_like OXA-211_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-644
|
|
estrain@4
|
430 Protein Added: WP_140423314.1 blaOXA-211_like OXA-211_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-645
|
|
estrain@4
|
431 Protein Added: WP_140423315.1 blaOXA-134_like OXA-134_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-647
|
|
estrain@4
|
432 Protein Added: WP_140423316.1 blaOXA-134_like OXA-134_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-648
|
|
estrain@4
|
433 Protein Added: WP_140423317.1 blaOXA-211_like OXA-211_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-650
|
|
estrain@4
|
434 Protein Added: WP_140423318.1 blaOXA-143_like OXA-143_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-825
|
|
estrain@4
|
435 Protein Added: WP_140423319.1 blaOXA-213_like OXA-213_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-826
|
|
estrain@4
|
436 Protein Added: WP_140423320.1 blaOXA-10_like OXA-10_family_class_D_beta-lactamase_OXA-827
|
|
estrain@4
|
437 Protein Added: WP_140423321.1 blaOXA-51_like OXA-51_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-828
|
|
estrain@4
|
438 Protein Added: WP_140423322.1 blaOXA-51_like OXA-51_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-829
|
|
estrain@4
|
439 Protein Added: WP_140423323.1 blaOXA-51_like OXA-51_family_carbapenem-hydrolyzing_class_D_beta-lactamase_OXA-831
|
|
estrain@4
|
440 Protein Added: WP_140423324.1 blaOXA-48_like OXA-48_family_class_D_beta-lactamase_OXA-833
|
|
estrain@4
|
441 Protein Added: WP_140423325.1 blaPDC class_C_beta-lactamase_PDC-333
|
|
estrain@4
|
442 Protein Added: WP_140423326.1 blaPOM subclass_B3_metallo-beta-lactamase_POM-2
|
|
estrain@4
|
443 Protein Added: WP_140423327.1 blaVIM subclass_B1_metallo-beta-lactamase_VIM-64
|
|
estrain@4
|
444 Protein Added: WP_140423328.1 blaVIM subclass_B1_metallo-beta-lactamase_VIM-65
|
|
estrain@4
|
445 Protein Added: WP_140423329.1 mcr-1 phosphoethanolamine--lipid_A_transferase_MCR-1.20
|
|
estrain@4
|
446 Protein Added: WP_140423330.1 mcr-1 phosphoethanolamine--lipid_A_transferase_MCR-1.21
|
|
estrain@4
|
447 Protein Added: WP_140423331.1 mcr-3 phosphoethanolamine--lipid_A_transferase_MCR-3.26
|
|
estrain@4
|
448 Protein Added: WP_140423332.1 mcr-3 phosphoethanolamine--lipid_A_transferase_MCR-3.30
|
|
estrain@4
|
449 Protein Modified: ACM67153.1 lamda-2 intimin_type_lambda updated to ACM67153.1 lambda-2 intimin_type_lambda
|
|
estrain@4
|
450 Protein Modified: WP_001100753.1 blaPER class_A_extended-spectrum_beta-lactamase_PER-1 updated to WP_001100753.1 blaPER inhibitor-resistant_class_A_extended-spectrum_beta-lactamase_PER-1
|
|
estrain@4
|
451 Protein Modified: WP_002317273.1 vanR-B VanB-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_002317273.1 vanR-B VanB-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
|
|
estrain@4
|
452 Protein Modified: WP_002368697.1 vanR-B VanB-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_002368697.1 vanR-B VanB-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
|
|
estrain@4
|
453 Protein Modified: WP_032489743.1 vanR-B VanB-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_032489743.1 vanR-B VanB-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
|
|
estrain@4
|
454 Protein Modified: WP_063856719.1 vanR-B VanB-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_063856719.1 vanR-B VanB-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
|
|
estrain@4
|
455 Protein Modified: WP_063856723.1 vanR-B VanB-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_063856723.1 vanR-B VanB-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
|
|
estrain@4
|
456 Protein Modified: WP_063856729.1 vanR-O VanO-type_vancomycin_resistance_DNA-binding_response_regulator_VanR updated to WP_063856729.1 vanR-O VanO-type_vancomycin_resistance_response_regulator_transcription_factor_VanR
|
|
estrain@4
|
457 Protein Modified: WP_063860636.1 blaKPC carbapenem-hydrolyzing_class_A_beta-lactamase_KPC-14 updated to WP_063860636.1 blaKPC inhibitor-resistant_class_A_extended-spectrum_beta-lactamase_KPC-14
|
|
estrain@4
|
458 - AMR HMM library Changes:
|
|
estrain@4
|
459 Total: Added 5
|
|
estrain@4
|
460 Total: Prev. Release 610
|
|
estrain@4
|
461 Total: Removed 12
|
|
estrain@4
|
462 Total: This Release 603
|
|
estrain@4
|
463 HMM Removed: NF000252.1 MexX
|
|
estrain@4
|
464 HMM Removed: NF000282.2 RND_permease_1
|
|
estrain@4
|
465 HMM Removed: NF000314.1 adeB
|
|
estrain@4
|
466 HMM Removed: NF000315.1 adeC-adeK-oprM
|
|
estrain@4
|
467 HMM Removed: NF007842.1 PRK10555.1
|
|
estrain@4
|
468 HMM Removed: NF011706.2 PRK15127.1
|
|
estrain@4
|
469 HMM Removed: NF028537.1 P_eth_NH2_trans
|
|
estrain@4
|
470 HMM Removed: NF033086.2 penta_rpt_Qnr
|
|
estrain@4
|
471 HMM Removed: NF033134.0 cmlA_floR
|
|
estrain@4
|
472 HMM Removed: NF033143.1 efflux_OM_AdeK
|
|
estrain@4
|
473 HMM Removed: NF033643.1 EspJ_gen
|
|
estrain@4
|
474 HMM Removed: NF033651.1 cyto_nec_fctrs
|
|
estrain@4
|
475 HMM Added: NF000478.2 linco_LnuE
|
|
estrain@4
|
476 HMM Added: NF012180.1 tet_MFS_43
|
|
estrain@4
|
477 HMM Added: NF033866.1 blaCDD
|
|
estrain@4
|
478 HMM Added: NF033867.1 blaPAU
|
|
estrain@4
|
479 HMM Added: NF033868.0 trim_DfrA36
|
|
estrain@4
|
480 - Protein family changes:
|
|
estrain@4
|
481 Total: Added 11
|
|
estrain@4
|
482 Total: Prev. Release 1449
|
|
estrain@4
|
483 Total: Removed 6
|
|
estrain@4
|
484 Total: This Release 1454
|
|
estrain@4
|
485 Family Removed: NF011706.2 acrB
|
|
estrain@4
|
486 Family Removed: NF007842.1 acrD
|
|
estrain@4
|
487 Family Removed: NF000314.1 adeB/adeJ
|
|
estrain@4
|
488 Family Removed: NF033143.1 adeK
|
|
estrain@4
|
489 Family Removed: - lamda
|
|
estrain@4
|
490 Family Removed: - lamda-2
|
|
estrain@4
|
491 Family Added: - aadA1bt
|
|
estrain@4
|
492 Family Added: - arsB
|
|
estrain@4
|
493 Family Added: - arsB_R773
|
|
estrain@4
|
494 Family Added: NF033866.1 blaCDD
|
|
estrain@4
|
495 Family Added: NF033867.1 blaPAU
|
|
estrain@4
|
496 Family Added: NF033868.0 dfrA36
|
|
estrain@4
|
497 Family Added: - emrD3
|
|
estrain@4
|
498 Family Added: - lambda
|
|
estrain@4
|
499 Family Added: - lambda-2
|
|
estrain@4
|
500 Family Added: NF000478.2 lnu(E)
|
|
estrain@4
|
501 Family Added: NF012180.1 tet(43)
|
|
estrain@4
|
502 Family Changed: NF030466.1 MerP_Gneg updated to TIGR02052.1 MerP_Gneg
|
|
estrain@4
|
503 Family Changed: NF030467.1 merA updated to TIGR02053.1 merA
|
|
estrain@4
|
504
|
|
estrain@4
|
505
|
|
estrain@4
|
506 ---------------------------------------------------------------------
|
|
estrain@4
|
507 Changes included in 2019-06-18.1
|
|
estrain@4
|
508 ---------------------------------------------------------------------
|
|
estrain@4
|
509
|
|
estrain@4
|
510 This the first alpha release of the AMRFinderPlus database. For this and all
|
|
estrain@4
|
511 following releases there is a distinction between "core" proteins which
|
|
estrain@4
|
512 correspond to the genes that would previously have been reported by AMRFinder
|
|
estrain@4
|
513 and "plus" proteins that are new genes and classes of genes. The "core"
|
|
estrain@4
|
514 designation is given to proteins where we believe their presence is likely to
|
|
estrain@4
|
515 have an important effect on antimicrobial resistance.
|
|
estrain@4
|
516
|
|
estrain@4
|
517 * Screen for select point mutations for antibiotic resistance from Salmonella,
|
|
estrain@4
|
518 E. coli, and Campylobacter
|
|
estrain@4
|
519 * Protein mutations in: 50S_L22 protein, acrB, acrR, basR, cmeR, cyaA,
|
|
estrain@4
|
520 fabG, fabI, folP, gyrA, gyrB, lon, marR, murA, nfsA, ompF, parC, parE,
|
|
estrain@4
|
521 pmrA, pmrB, ptsI, ramR, rpoB, rpsL, soxR, soxS, tufA, uhpA, uhpT
|
|
estrain@4
|
522 * Nucleotide mutations in 16S and 23S rRNA
|
|
estrain@4
|
523 * Included point mutations are listed in the reference gene database
|
|
estrain@4
|
524 (https://www.ncbi.nlm.nih.gov/pathogens/isolates#/refgene/)
|
|
estrain@4
|
525 * New "Plus" genes
|
|
estrain@4
|
526 * virulence factors
|
|
estrain@4
|
527 * biocide resistance
|
|
estrain@4
|
528 * metal resistance
|
|
estrain@4
|
529 * heat resistance
|
|
estrain@4
|
530 * acid resistance
|
|
estrain@4
|
531 * Combined and integrated results from nucleotide and protein searches
|
|
estrain@4
|
532
|
|
estrain@4
|
533 File formats have changed significantly. See https://github.com/evolarjun/amr/wiki
|
|
estrain@4
|
534 for details.
|
|
estrain@4
|
535
|
|
estrain@4
|
536 Since release 2019-04-29.1 only one change has been made to the core AMR
|
|
estrain@4
|
537 proteins. Qac's are now categorized under Type STRESS and Subtype BIOCIDE.
|
|
estrain@4
|
538
|
|
estrain@4
|
539 - Protein changes:
|
|
estrain@4
|
540 Prev. Release: 4942
|
|
estrain@4
|
541 This Release: 5718
|
|
estrain@4
|
542 Added: 776
|
|
estrain@4
|
543 Modified: 0
|
|
estrain@4
|
544
|
|
estrain@4
|
545 Protein Added: ABF69110.1 eae intimin type beta
|
|
estrain@4
|
546 Protein Added: ABF69117.1 eae intimin type epsilon
|
|
estrain@4
|
547 Protein Added: ABF69121.1 eae intimin type epsilon
|
|
estrain@4
|
548 Protein Added: ABF69122.1 eae intimin type alpha
|
|
estrain@4
|
549 Protein Added: KYU89760.1 subB subtilase AB5 cytotoxin subunit B
|
|
estrain@4
|
550 Protein Added: AAG16664.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
551 Protein Added: AAG16667.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
552 Protein Added: AAG16676.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
553 Protein Added: AAB09625.1 arsD arsenite efflux transporter metallochaperone ArsD
|
|
estrain@4
|
554 Protein Added: AAB09626.1 arsA arsenite efflux transporter ATPase subunit ArsA
|
|
estrain@4
|
555 Protein Added: CAJ76690.1 stx1Aa Shiga toxin Stx1a subunit A
|
|
estrain@4
|
556 Protein Added: CAJ76692.1 stx1Aa Shiga toxin Stx1a subunit A
|
|
estrain@4
|
557 Protein Added: AAA98291.1 terC tellurium resistance membrane protein TerC
|
|
estrain@4
|
558 Protein Added: AAA98293.1 terE tellurium resistance cAMP binding protein TerE
|
|
estrain@4
|
559 Protein Added: AAG27731.1 norM sodium-coupled multidrug efflux MATE transporter NorM
|
|
estrain@4
|
560 Protein Added: ABF02983.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
|
|
estrain@4
|
561 Protein Added: ABF04028.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
|
|
estrain@4
|
562 Protein Added: BAE98279.1 bfpA bundle-forming pilus major subunit BfpA
|
|
estrain@4
|
563 Protein Added: BAE98281.1 bfpA bundle-forming pilus major subunit BfpA
|
|
estrain@4
|
564 Protein Added: CAC14596.1 smeF multidrug efflux RND transporter outer membrane subunit SmeF
|
|
estrain@4
|
565 Protein Added: AAA83973.1 merR1 mercury resistance transcriptional regulator MerR1
|
|
estrain@4
|
566 Protein Added: AAA83975.1 merT mercuric transport protein MerT
|
|
estrain@4
|
567 Protein Added: AAA98292.1 terD tellurium resistance membrane protein TerD
|
|
estrain@4
|
568 Protein Added: AAG34504.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
569 Protein Added: APX31172.1 yfdX1 heat resistance protein YfdX1
|
|
estrain@4
|
570 Protein Added: APX31174.1 hdeD-GI heat resistance membrane protein HdeD-GI
|
|
estrain@4
|
571 Protein Added: APX31176.1 trxLHR heat resistance system thioredoxin Trx-GI
|
|
estrain@4
|
572 Protein Added: APX31177.1 kefB-GI heat resistance system K+/H+ antiporter KefB-GI
|
|
estrain@4
|
573 Protein Added: APX31178.1 psi-GI heat resistance protein PsiE-GI
|
|
estrain@4
|
574 Protein Added: AAA85087.1 f17a F17A fimbrial adhesin
|
|
estrain@4
|
575 Protein Added: AAA85196.1 cnf1 cytotoxic necrotizing factor CNF1
|
|
estrain@4
|
576 Protein Added: AAG37043.1 espC serine protease autotransporter toxin EspC
|
|
estrain@4
|
577 Protein Added: ABI93207.1 fedF F18 fimbrial adhesin subunit FedF
|
|
estrain@4
|
578 Protein Added: BAF33872.1 capU putative hexosyltransferase CapU
|
|
estrain@4
|
579 Protein Added: BAF33878.1 aggR aggregative adherence transcriptional regulator AggR
|
|
estrain@4
|
580 Protein Added: BAF33885.1 sepA serine protease autotransporter toxin SepA
|
|
estrain@4
|
581 Protein Added: BAF33888.1 agg4D aggregative adherence fimbria 4 chaperone Agg4D/HdaD
|
|
estrain@4
|
582 Protein Added: BAF33891.1 agg4A aggregative adherence fimbria 4 major subunit Agg4A/HdaA
|
|
estrain@4
|
583 Protein Added: BAF33901.1 aatA dispersin export ABC transporter outer membrane protein AatA
|
|
estrain@4
|
584 Protein Added: BAF34018.1 aap dispersin Aap
|
|
estrain@4
|
585 Protein Added: ABJ00546.1 iss increased serum survival lipoprotein Iss
|
|
estrain@4
|
586 Protein Added: ABJ02430.1 ireA TonB-dependent siderophore receptor IreA
|
|
estrain@4
|
587 Protein Added: OPH66324.1 lpfA1 long polar fimbria major subunit LpfA1
|
|
estrain@4
|
588 Protein Added: ABJ90288.1 fedF F18 fimbrial adhesin subunit FedF
|
|
estrain@4
|
589 Protein Added: AAA86846.1 terZ tellurium resistance-associated protein TerZ
|
|
estrain@4
|
590 Protein Added: ABC67318.2 stx2Aa Shiga toxin Stx2a subunit A
|
|
estrain@4
|
591 Protein Added: AAG40758.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
592 Protein Added: AAA88371.1 merE broad-spectrum mercury transporter MerE
|
|
estrain@4
|
593 Protein Added: AAG42788.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
594 Protein Added: ASF80766.1 yfdX2 heat resistance protein YfdX2
|
|
estrain@4
|
595 Protein Added: ASF80771.1 shsP small heat shock protein sHSP20-GI
|
|
estrain@4
|
596 Protein Added: CAM11313.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
597 Protein Added: CAM11314.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
598 Protein Added: CAM11315.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
599 Protein Added: CAM11317.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
600 Protein Added: CAM11321.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
601 Protein Added: CAM11323.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
602 Protein Added: CAM11324.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
603 Protein Added: CAM11325.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
604 Protein Added: AAA92618.1 f17a F17A fimbrial adhesin
|
|
estrain@4
|
605 Protein Added: AAA92621.1 f17g F17G fimbrial adhesin
|
|
estrain@4
|
606 Protein Added: AAA93060.1 arsD arsenite efflux transporter metallochaperone ArsD
|
|
estrain@4
|
607 Protein Added: AAG53662.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
608 Protein Added: BAF45432.1 tccP Tir-cytoskeleton coupling protein TccP
|
|
estrain@4
|
609 Protein Added: BAF45437.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
610 Protein Added: BAF45439.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
611 Protein Added: BAF45440.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
612 Protein Added: BAF45447.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
613 Protein Added: BAF45451.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
614 Protein Added: BAF45459.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
615 Protein Added: ABM90581.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
616 Protein Added: ABM90583.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
617 Protein Added: ABM90587.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
618 Protein Added: ABM90589.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
619 Protein Added: ABM90597.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
620 Protein Added: ABM90605.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
621 Protein Added: ABM90615.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
622 Protein Added: AAC46147.1 yfeA iron/manganese ABC transporter substrate-binding protein YfeA
|
|
estrain@4
|
623 Protein Added: AAC46148.1 yfeB iron/manganese ABC transporter ATP-binding protein YfeB
|
|
estrain@4
|
624 Protein Added: AAC46150.1 yfeD iron/manganese ABC transporter permease subunit YfeD
|
|
estrain@4
|
625 Protein Added: ATE69525.1 acr3 arsenite efflux transporter Acr3
|
|
estrain@4
|
626 Protein Added: AAG55141.1 nleC type III secretion system effector zinc metalloprotease NleC
|
|
estrain@4
|
627 Protein Added: AAG56990.1 espJ type III secretion system effector ADP-ribosyltransferase EspJ
|
|
estrain@4
|
628 Protein Added: AAG58695.1 lpfA1 long polar fimbria major subunit LpfA1
|
|
estrain@4
|
629 Protein Added: AAG58814.1 espF type III secretion system LEE effector EspF
|
|
estrain@4
|
630 Protein Added: AAG58818.1 espB type III secretion system LEE translocon pore-forming subunit EspB
|
|
estrain@4
|
631 Protein Added: AAG58825.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
632 Protein Added: AAK15050.1 ttgR efflux transport transcriptional regulator TtgR
|
|
estrain@4
|
633 Protein Added: AAK16940.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
634 Protein Added: AAK17180.1 nfaE Dr family non-fimbrial adhesin I chaperone NfaE
|
|
estrain@4
|
635 Protein Added: AAK18385.1 sepA serine protease autotransporter toxin SepA
|
|
estrain@4
|
636 Protein Added: AAK18444.1 ipaD type III secretion system needle tip complex protein IpaD
|
|
estrain@4
|
637 Protein Added: BAB37280.1 nleB type III secretion system effector arginine glycosyltransferase NleB
|
|
estrain@4
|
638 Protein Added: BAB38093.1 lpfA2 long polar fimbria major subunit LpfA2
|
|
estrain@4
|
639 Protein Added: AAC44736.1 terW tellurium resistance protein TerW
|
|
estrain@4
|
640 Protein Added: AVL28824.1 aar AggR-activated transcriptional regulator Aar
|
|
estrain@4
|
641 Protein Added: SPD96882.1 silS copper/silver sensor histidine kinase SilS
|
|
estrain@4
|
642 Protein Added: SPD96883.1 silR copper/silver response regulator transcription factor SilR
|
|
estrain@4
|
643 Protein Added: SPD96884.1 silC Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC
|
|
estrain@4
|
644 Protein Added: CAA57177.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
645 Protein Added: CAA57175.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
646 Protein Added: CAA57173.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
647 Protein Added: CAA57171.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
648 Protein Added: BAB43874.1 cadD cadmium resistance transporter CadD
|
|
estrain@4
|
649 Protein Added: AAK48830.1 cadR cadmium resistance transcriptional regulator CadR
|
|
estrain@4
|
650 Protein Added: BAF52034.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
651 Protein Added: BAF52035.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
652 Protein Added: BAF52033.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
653 Protein Added: BAF52358.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
654 Protein Added: BAF52360.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
655 Protein Added: BAF52362.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
656 Protein Added: BAF52363.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
657 Protein Added: BAF52364.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
658 Protein Added: BAF52365.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
659 Protein Added: BAF52366.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
660 Protein Added: BAF52367.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
661 Protein Added: BAF52370.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
662 Protein Added: BAF52374.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
663 Protein Added: BAF52377.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
664 Protein Added: BAF52548.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
665 Protein Added: BAF52549.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
666 Protein Added: BAB47641.1 merB organomercurial lyase MerB
|
|
estrain@4
|
667 Protein Added: AAK56853.1 chrR class I chromate reductase ChrR
|
|
estrain@4
|
668 Protein Added: CAC39286.1 espI serine protease autotransporter EspI
|
|
estrain@4
|
669 Protein Added: AAA83977.1 merA mercury(II) reductase
|
|
estrain@4
|
670 Protein Added: AAA23405.1 fasA F6 fimbrial major subunit FasA
|
|
estrain@4
|
671 Protein Added: AAA23421.1 fim41a fimbrial adhesin F41 protein Fim41a
|
|
estrain@4
|
672 Protein Added: AAK66972.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
673 Protein Added: AAC41416.1 cfaC CFA/I pilus usher protein CfaC
|
|
estrain@4
|
674 Protein Added: CAB54534.2 mchB microcin H47
|
|
estrain@4
|
675 Protein Added: AAK69562.1 srpS solvent efflux transporter transcriptional repressor SrpS
|
|
estrain@4
|
676 Protein Added: AAA23734.1 fedA F18 fimbrial major subunit FedA
|
|
estrain@4
|
677 Protein Added: ABQ02454.1 eae intimin type rho
|
|
estrain@4
|
678 Protein Added: AAA24032.1 faeG F4 fimbrial adhesin subunit FaeG
|
|
estrain@4
|
679 Protein Added: AAA24035.1 faeG F4 fimbrial adhesin subunit FaeG
|
|
estrain@4
|
680 Protein Added: AAA24390.1 faeG F4 fimbrial adhesin subunit FaeG
|
|
estrain@4
|
681 Protein Added: AXV27948.1 agg3C aggregative adherence fimbria 3 usher protein Agg3C
|
|
estrain@4
|
682 Protein Added: AAA19189.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
683 Protein Added: AAA19190.1 stx2Be Shiga toxin Stx2e subunit B
|
|
estrain@4
|
684 Protein Added: AAA24632.1 stx2Af Shiga toxin Stx2f subunit A
|
|
estrain@4
|
685 Protein Added: AAA24633.1 stx2Bf Shiga toxin Stx2f subunit B
|
|
estrain@4
|
686 Protein Added: AAA71893.1 stx1Aa Shiga toxin Stx1a subunit A
|
|
estrain@4
|
687 Protein Added: AAA71894.1 stx1Ba Shiga toxin Stx1a subunit B
|
|
estrain@4
|
688 Protein Added: AAA24653.1 sta1 heat-stable enterotoxin ST-I group a
|
|
estrain@4
|
689 Protein Added: ABR09925.1 stx2Ba Shiga toxin Stx2a subunit B
|
|
estrain@4
|
690 Protein Added: ABR09934.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
691 Protein Added: ABR09935.1 stx2Bc Shiga toxin Stx2c subunit B
|
|
estrain@4
|
692 Protein Added: ABR09936.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
693 Protein Added: ABR09937.1 stx2Bd Shiga toxin Stx2d subunit B
|
|
estrain@4
|
694 Protein Added: ABR09945.1 stx2Ba Shiga toxin Stx2a subunit B
|
|
estrain@4
|
695 Protein Added: ABR09961.1 stx2Ba Shiga toxin Stx2a subunit B
|
|
estrain@4
|
696 Protein Added: ABR09963.1 stx2Ba Shiga toxin Stx2a subunit B
|
|
estrain@4
|
697 Protein Added: ABR10024.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
698 Protein Added: CAA30714.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
699 Protein Added: CAA30715.1 stx2Ba Shiga toxin Stx2a subunit B
|
|
estrain@4
|
700 Protein Added: AAB59075.1 merT mercuric transport protein MerT
|
|
estrain@4
|
701 Protein Added: AAA88369.1 merB organomercurial lyase MerB
|
|
estrain@4
|
702 Protein Added: AAA88370.1 merD mercury resistance co-regulator MerD
|
|
estrain@4
|
703 Protein Added: AAA98222.1 merT mercuric transport protein MerT
|
|
estrain@4
|
704 Protein Added: AAA98223.1 merP mercury resistance system periplasmic binding protein MerP
|
|
estrain@4
|
705 Protein Added: AAA25638.1 arsC thioredoxin-dependent arsenate reductase
|
|
estrain@4
|
706 Protein Added: AAA88432.1 chrA chromate resistance efflux protein ChrA
|
|
estrain@4
|
707 Protein Added: AAA25803.1 copR heavy metal response regulator transcription factor CopR
|
|
estrain@4
|
708 Protein Added: AAA25804.1 copS copper resistance membrane spanning protein CopS
|
|
estrain@4
|
709 Protein Added: AAA25806.1 copA laccase-like oxidase CopA
|
|
estrain@4
|
710 Protein Added: AAA25807.1 copB copper-binding protein CopB
|
|
estrain@4
|
711 Protein Added: CAC48396.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
712 Protein Added: CAC48398.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
713 Protein Added: AAA21094.1 arsA arsenite efflux transporter ATPase subunit ArsA
|
|
estrain@4
|
714 Protein Added: BAB62897.1 cofA type IV pilus CFA/III major pilin
|
|
estrain@4
|
715 Protein Added: BAB62907.1 cofA type IV pilus CFA/III major pilin
|
|
estrain@4
|
716 Protein Added: CAA63849.1 ehxA enterohemolysin
|
|
estrain@4
|
717 Protein Added: AAA26402.1 klaB tellurium resistance system protein klaB
|
|
estrain@4
|
718 Protein Added: AAA26403.1 klaC tellurium resistance system protein klaC
|
|
estrain@4
|
719 Protein Added: AAK97136.1 cfaC CFA/I pilus usher protein CfaC
|
|
estrain@4
|
720 Protein Added: AAK99679.1 pmrA multidrug efflux MFS transporter PmrA
|
|
estrain@4
|
721 Protein Added: CAC69248.1 merR mercury resistance transcriptional regulator MerR
|
|
estrain@4
|
722 Protein Added: CAC69249.1 merT mercuric transport protein MerT
|
|
estrain@4
|
723 Protein Added: CAC69250.1 merP mercury resistance system periplasmic binding protein MerP
|
|
estrain@4
|
724 Protein Added: CAC69251.1 merA mercury(II) reductase
|
|
estrain@4
|
725 Protein Added: BAB64566.1 bexA multidrug efflux MATE transporter BexA
|
|
estrain@4
|
726 Protein Added: AAA27589.1 arsC thioredoxin-dependent arsenate reductase
|
|
estrain@4
|
727 Protein Added: ABU55302.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
728 Protein Added: BAF76383.1 ttgA toluene efflux RND transporter periplasmic adaptor subunit TtgA
|
|
estrain@4
|
729 Protein Added: BAF76384.1 ttgB multidrug efflux RND transporter permease subunit TtgB
|
|
estrain@4
|
730 Protein Added: ABV01314.1 ltcA heat-labile enterotoxin LT subunit A
|
|
estrain@4
|
731 Protein Added: BAF79679.1 smdA multidrug efflux ABC transporter permease/ATP-binding subunit SmdA
|
|
estrain@4
|
732 Protein Added: BAF79680.1 smdB multidrug efflux ABC transporter permease/ATP-binding subunit SmdB
|
|
estrain@4
|
733 Protein Added: ABV16438.1 eatA serine protease autotransporter toxin EatA
|
|
estrain@4
|
734 Protein Added: BAB68369.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
735 Protein Added: BAB68370.1 stx2Bc Shiga toxin Stx2c subunit B
|
|
estrain@4
|
736 Protein Added: BAF80121.1 ssmE multidrug efflux SMR transporter SsmE
|
|
estrain@4
|
737 Protein Added: AAL06376.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
738 Protein Added: AAL06381.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
739 Protein Added: AAL06387.1 espF type III secretion system LEE effector EspF
|
|
estrain@4
|
740 Protein Added: AAC23256.1 hmrM sodium-coupled multidrug efflux MATE transporter HmrM
|
|
estrain@4
|
741 Protein Added: ABQ02442.1 ehxA enterohemolysin
|
|
estrain@4
|
742 Protein Added: ABQ02443.1 ehxA enterohemolysin
|
|
estrain@4
|
743 Protein Added: ABQ02445.1 ehxA enterohemolysin
|
|
estrain@4
|
744 Protein Added: ABQ02447.1 ehxA enterohemolysin
|
|
estrain@4
|
745 Protein Added: ABQ02448.1 ehxA enterohemolysin
|
|
estrain@4
|
746 Protein Added: AAL08400.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
747 Protein Added: BAF92845.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
748 Protein Added: AAL14441.1 adeC multidrug efflux RND transporter AdeABC outer membrane channel subunit AdeC
|
|
estrain@4
|
749 Protein Added: CAP17609.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
750 Protein Added: CAP17610.1 stx2Be Shiga toxin Stx2e subunit B
|
|
estrain@4
|
751 Protein Added: AAL18821.1 epeA serine protease autotransporter EpeA
|
|
estrain@4
|
752 Protein Added: AAL19305.1 mdsB multidrug efflux RND transporter permease subunit MdsB
|
|
estrain@4
|
753 Protein Added: AAL19306.1 mdsA multidrug efflux RND transporter periplasmic adaptor subunit MdsA
|
|
estrain@4
|
754 Protein Added: AAL19307.1 golT gold/copper-translocating P-type ATPase GolT
|
|
estrain@4
|
755 Protein Added: AAL19308.1 golS Au(I) sensor transcriptional regulator GolS
|
|
estrain@4
|
756 Protein Added: BAF96525.1 espJ type III secretion system effector ADP-ribosyltransferase EspJ
|
|
estrain@4
|
757 Protein Added: BAF96538.1 nleB2 type III secretion system effector arginine glycosyltransferase NleB2
|
|
estrain@4
|
758 Protein Added: BAF96541.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
759 Protein Added: BAA18405.1 acr3 arsenite efflux transporter Acr3
|
|
estrain@4
|
760 Protein Added: BAA18407.1 arsC thioredoxin-dependent arsenate reductase
|
|
estrain@4
|
761 Protein Added: AAL26283.1 saa autoagglutinating adhesin Saa
|
|
estrain@4
|
762 Protein Added: CAA65654.1 espB type III secretion system LEE translocon pore-forming subunit EspB
|
|
estrain@4
|
763 Protein Added: AAC45964.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
764 Protein Added: AAC45965.1 stx2Be Shiga toxin Stx2e subunit B
|
|
estrain@4
|
765 Protein Added: ACA34793.1 tsh temperature-sensitive protease autotransporter hemagglutinin Tsh
|
|
estrain@4
|
766 Protein Added: BAG11995.1 tccP Tir-cytoskeleton coupling protein TccP
|
|
estrain@4
|
767 Protein Added: BAG11997.1 tccP Tir-cytoskeleton coupling protein TccP
|
|
estrain@4
|
768 Protein Added: BAG12001.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
769 Protein Added: ACB16424.1 lpfA long polar fimbria major subunit LpfA-O113
|
|
estrain@4
|
770 Protein Added: ACB16655.1 eilA HilA family transcriptional regulator EilA
|
|
estrain@4
|
771 Protein Added: ACB17037.1 air inverse autotransporter adhesin EaeX/Air
|
|
estrain@4
|
772 Protein Added: CAA70196.1 merT mercuric transport protein MerT
|
|
estrain@4
|
773 Protein Added: ACB72721.1 faeG F4 fimbrial adhesin subunit FaeG
|
|
estrain@4
|
774 Protein Added: AAC44731.1 espC serine protease autotransporter toxin EspC
|
|
estrain@4
|
775 Protein Added: AAC74250.1 ymgB biofilm/acid-resistance regulator AriR
|
|
estrain@4
|
776 Protein Added: AAC76298.1 acrF multidrug efflux RND transporter permease subunit AcrF
|
|
estrain@4
|
777 Protein Added: AAC77293.1 mdtM multidrug efflux MFS transporter MdtM
|
|
estrain@4
|
778 Protein Added: AAL57565.1 nleB type III secretion system effector arginine glycosyltransferase NleB
|
|
estrain@4
|
779 Protein Added: BAB82994.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
780 Protein Added: BAB82996.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
781 Protein Added: BAB82998.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
782 Protein Added: BAB83000.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
783 Protein Added: BAB83002.1 stx2Ag Shiga toxin Stx2g subunit A
|
|
estrain@4
|
784 Protein Added: BAB83003.1 stx2Bg Shiga toxin Stx2g subunit B
|
|
estrain@4
|
785 Protein Added: BAB83005.1 stx2Bb Shiga toxin Stx2b subunit B
|
|
estrain@4
|
786 Protein Added: BAB83007.1 stx2Bb Shiga toxin Stx2b subunit B
|
|
estrain@4
|
787 Protein Added: BAB83020.1 stx2Ag Shiga toxin Stx2g subunit A
|
|
estrain@4
|
788 Protein Added: BAB83022.1 stx1Ac Shiga toxin Stx1c subunit A
|
|
estrain@4
|
789 Protein Added: BAB83023.1 stx1Bc Shiga toxin Stx1c subunit B
|
|
estrain@4
|
790 Protein Added: BAB83024.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
791 Protein Added: AAL72309.1 sepA serine protease autotransporter toxin SepA
|
|
estrain@4
|
792 Protein Added: AAL72350.1 ipaD type III secretion system needle tip complex protein IpaD
|
|
estrain@4
|
793 Protein Added: AAL05407.1 tcrB copper-translocating P-type ATPase TcrB
|
|
estrain@4
|
794 Protein Added: ACD06066.1 capU putative hexosyltransferase CapU
|
|
estrain@4
|
795 Protein Added: ACD06132.1 ipaD type III secretion system needle tip complex protein IpaD
|
|
estrain@4
|
796 Protein Added: ACD07996.1 ipaH3 T3SS effector E3 ubiquitin-protein ligase IpaH3
|
|
estrain@4
|
797 Protein Added: ACD09076.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
|
|
estrain@4
|
798 Protein Added: BAA11821.1 chrR class I chromate reductase ChrR
|
|
estrain@4
|
799 Protein Added: CAQ45062.1 emrC multidrug efflux transporter outer membrane subunit EmrC
|
|
estrain@4
|
800 Protein Added: CAQ45063.1 emrA multidrug efflux MFS transporter periplasmic adaptor subunit EmrA
|
|
estrain@4
|
801 Protein Added: CAQ45064.1 emrB multidrug efflux MFS transporter permease subunit EmrB
|
|
estrain@4
|
802 Protein Added: ACF05260.1 agg4A aggregative adherence fimbria 4 major subunit Agg4A/HdaA
|
|
estrain@4
|
803 Protein Added: ACF30254.1 mtrR multidrug efflux system transcriptional repressor MtrR
|
|
estrain@4
|
804 Protein Added: ACF30256.1 mtrF AbgT family antimetabolite efflux transporter MtrF
|
|
estrain@4
|
805 Protein Added: BAG66379.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
806 Protein Added: BAG66729.1 espB type III secretion system LEE translocon pore-forming subunit EspB
|
|
estrain@4
|
807 Protein Added: BAG66736.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
808 Protein Added: ACG59623.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
809 Protein Added: ACG59674.1 espB type III secretion system LEE translocon pore-forming subunit EspB
|
|
estrain@4
|
810 Protein Added: ACG59676.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
811 Protein Added: ACG59681.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
812 Protein Added: ACG59730.1 espB type III secretion system LEE translocon pore-forming subunit EspB
|
|
estrain@4
|
813 Protein Added: ACG59732.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
814 Protein Added: ACG59737.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
815 Protein Added: ACG76368.1 arsP organoarsenical efflux permease ArsP
|
|
estrain@4
|
816 Protein Added: ACI12150.1 terB tellurium resistance membrane protein TerB
|
|
estrain@4
|
817 Protein Added: BAG76115.1 iss increased serum survival lipoprotein Iss
|
|
estrain@4
|
818 Protein Added: AAA98099.1 stx1Aa Shiga toxin Stx1a subunit A
|
|
estrain@4
|
819 Protein Added: CAS08589.1 nleB2 type III secretion system effector arginine glycosyltransferase NleB2
|
|
estrain@4
|
820 Protein Added: CAS08990.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
821 Protein Added: CAS10463.1 espC serine protease autotransporter toxin EspC
|
|
estrain@4
|
822 Protein Added: CAS06720.1 eae intimin type gamma
|
|
estrain@4
|
823 Protein Added: CAS06721.1 eae intimin type alpha
|
|
estrain@4
|
824 Protein Added: CAS06723.1 eae intimin type alpha
|
|
estrain@4
|
825 Protein Added: BAA20334.1 merR mercury resistance transcriptional regulator MerR
|
|
estrain@4
|
826 Protein Added: BAA20336.1 merP mercury resistance system periplasmic binding protein MerP
|
|
estrain@4
|
827 Protein Added: BAA20337.1 merA mercury(II) reductase
|
|
estrain@4
|
828 Protein Added: AAM70045.1 stx2Aa Shiga toxin Stx2a subunit A
|
|
estrain@4
|
829 Protein Added: CAQ87187.1 iroN siderophore salmochelin receptor IroN
|
|
estrain@4
|
830 Protein Added: CAV00478.1 lpfA long polar fimbria major subunit LpfA
|
|
estrain@4
|
831 Protein Added: CAV00812.1 lpfA long polar fimbria major subunit LpfA-O113
|
|
estrain@4
|
832 Protein Added: CAV02025.1 capU putative hexosyltransferase CapU
|
|
estrain@4
|
833 Protein Added: CAQ90194.1 iss increased serum survival lipoprotein Iss
|
|
estrain@4
|
834 Protein Added: CAU95796.1 aatA dispersin export ABC transporter outer membrane protein AatA
|
|
estrain@4
|
835 Protein Added: CAU95824.1 agg3D aggregative adherence fimbria 3 chaperone Agg3D
|
|
estrain@4
|
836 Protein Added: CAQ97644.1 iss increased serum survival lipoprotein Iss
|
|
estrain@4
|
837 Protein Added: CAR01635.1 vactox vacuolating autotransporter toxin Vat
|
|
estrain@4
|
838 Protein Added: CAR09703.2 ireA TonB-dependent siderophore receptor IreA
|
|
estrain@4
|
839 Protein Added: CAR12622.1 iss increased serum survival lipoprotein Iss
|
|
estrain@4
|
840 Protein Added: CAR15326.1 air inverse autotransporter adhesin EaeX/Air
|
|
estrain@4
|
841 Protein Added: CAW30811.1 nfaE Dr family non-fimbrial adhesin I chaperone NfaE
|
|
estrain@4
|
842 Protein Added: CAW30815.1 nfaE Dr family non-fimbrial adhesin I chaperone NfaE
|
|
estrain@4
|
843 Protein Added: ACL13561.1 copR heavy metal response regulator transcription factor CopR
|
|
estrain@4
|
844 Protein Added: ACL13562.1 copS copper resistance membrane spanning protein CopS
|
|
estrain@4
|
845 Protein Added: ACL51961.1 ehxA enterohemolysin
|
|
estrain@4
|
846 Protein Added: ACL51990.1 toxB toxin B
|
|
estrain@4
|
847 Protein Added: AAM88296.1 agg3C aggregative adherence fimbria 3 usher protein Agg3C
|
|
estrain@4
|
848 Protein Added: AAM88297.1 agg3B aggregative adherence fimbria 3 minor subunit Agg3B
|
|
estrain@4
|
849 Protein Added: AAM88298.1 agg3A aggregative adherence fimbria 3 major subunit Agg3A
|
|
estrain@4
|
850 Protein Added: AAM88299.1 astA heat-stable enterotoxin EAST1
|
|
estrain@4
|
851 Protein Added: AAM88302.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
852 Protein Added: BAA14138.2 merC organomercurial transporter MerC
|
|
estrain@4
|
853 Protein Added: AAM88668.1 cueA copper resistance metal-translocating P1-type ATPase CueA
|
|
estrain@4
|
854 Protein Added: AAM90978.1 stx2Ba Shiga toxin Stx2a subunit B
|
|
estrain@4
|
855 Protein Added: CAX18553.1 nleB type III secretion system effector arginine glycosyltransferase NleB
|
|
estrain@4
|
856 Protein Added: CAX18626.1 nleB type III secretion system effector arginine glycosyltransferase NleB
|
|
estrain@4
|
857 Protein Added: CAX18635.1 espF type III secretion system LEE effector EspF
|
|
estrain@4
|
858 Protein Added: CAX18641.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
859 Protein Added: CAX18646.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
860 Protein Added: CAX18721.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
861 Protein Added: CAX18726.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
862 Protein Added: ACM67143.1 eae intimin type alpha
|
|
estrain@4
|
863 Protein Added: ACM67145.1 eae intimin type iota
|
|
estrain@4
|
864 Protein Added: ACM67146.1 eae intimin type alpha
|
|
estrain@4
|
865 Protein Added: ACM67148.1 eae intimin type gamma
|
|
estrain@4
|
866 Protein Added: ACM67149.1 eae intimin type gamma
|
|
estrain@4
|
867 Protein Added: ACM67152.1 eae intimin type beta
|
|
estrain@4
|
868 Protein Added: ACM67153.1 eae intimin type lambda
|
|
estrain@4
|
869 Protein Added: ACM67154.1 eae intimin type gamma
|
|
estrain@4
|
870 Protein Added: ACM67155.1 eae intimin type epsilon
|
|
estrain@4
|
871 Protein Added: ACM67156.1 eae intimin type epsilon
|
|
estrain@4
|
872 Protein Added: ACM67157.1 eae intimin type beta
|
|
estrain@4
|
873 Protein Added: ACM67158.1 eae intimin type epsilon
|
|
estrain@4
|
874 Protein Added: ACM67160.1 eae intimin type beta
|
|
estrain@4
|
875 Protein Added: ACM67161.1 eae intimin type beta
|
|
estrain@4
|
876 Protein Added: ACM67162.1 eae intimin type gamma
|
|
estrain@4
|
877 Protein Added: ACM67163.1 eae intimin type rho
|
|
estrain@4
|
878 Protein Added: ACM67164.1 eae intimin type gamma
|
|
estrain@4
|
879 Protein Added: ACM67165.1 eae intimin type gamma
|
|
estrain@4
|
880 Protein Added: ACM67166.1 eae intimin type gamma
|
|
estrain@4
|
881 Protein Added: ACM67167.1 eae intimin type epsilon
|
|
estrain@4
|
882 Protein Added: ACM67168.1 eae intimin type alpha
|
|
estrain@4
|
883 Protein Added: ACM67169.1 eae intimin type gamma
|
|
estrain@4
|
884 Protein Added: ACM67172.1 eae intimin type epsilon
|
|
estrain@4
|
885 Protein Added: ACM67177.1 eae intimin type gamma
|
|
estrain@4
|
886 Protein Added: ACM67178.1 eae intimin type epsilon
|
|
estrain@4
|
887 Protein Added: BAH24012.1 toxB toxin B
|
|
estrain@4
|
888 Protein Added: CAB14520.2 acr3 arsenite efflux transporter Acr3
|
|
estrain@4
|
889 Protein Added: ACO06752.1 emhB efflux RND transporter permease subunit EmhB
|
|
estrain@4
|
890 Protein Added: AAN03785.1 cnf1 cytotoxic necrotizing factor CNF1
|
|
estrain@4
|
891 Protein Added: AAN03786.1 cnf1 cytotoxic necrotizing factor CNF1
|
|
estrain@4
|
892 Protein Added: AAN04250.1 dpsA non-specific DNA-binding protein DpsA
|
|
estrain@4
|
893 Protein Added: BAC10987.1 stx1Ac Shiga toxin Stx1c subunit A
|
|
estrain@4
|
894 Protein Added: BAC10988.1 stx1Bc Shiga toxin Stx1c subunit B
|
|
estrain@4
|
895 Protein Added: BAC10992.1 stx1Bc Shiga toxin Stx1c subunit B
|
|
estrain@4
|
896 Protein Added: CAY54182.1 bfpA bundle-forming pilus major subunit BfpA
|
|
estrain@4
|
897 Protein Added: AAN29240.1 bepD multidrug efflux RND transporter periplasmic adaptor subunit BepD
|
|
estrain@4
|
898 Protein Added: AAN29241.1 bepE multidrug efflux RND transporter permease subunit BepE
|
|
estrain@4
|
899 Protein Added: AAN29871.1 bepC multidrug efflux RND transporter outer membrane subunit BepC
|
|
estrain@4
|
900 Protein Added: AAN33534.1 bepG multidrug efflux RND transporter permease subunit BepG
|
|
estrain@4
|
901 Protein Added: AAN33535.1 bepF multidrug efflux RND transporter periplasmic adaptor subunit BepF
|
|
estrain@4
|
902 Protein Added: CAD48850.1 cdtB cytolethal distending toxin type III/V nuclease subunit CdtB
|
|
estrain@4
|
903 Protein Added: CAC86907.1 merB organomercurial lyase MerB
|
|
estrain@4
|
904 Protein Added: BAH65949.1 iroN siderophore salmochelin receptor IroN
|
|
estrain@4
|
905 Protein Added: BAH72965.1 cdtB cytolethal distending toxin type II nuclease subunit CdtB
|
|
estrain@4
|
906 Protein Added: AAN42986.1 ipaH3 T3SS effector E3 ubiquitin-protein ligase IpaH3
|
|
estrain@4
|
907 Protein Added: AAN43435.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
|
|
estrain@4
|
908 Protein Added: AAN44449.1 sigA serine protease autotransporter toxin SigA
|
|
estrain@4
|
909 Protein Added: CAQ68302.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
910 Protein Added: ACS88189.1 ipaD type III secretion system needle tip complex protein IpaD
|
|
estrain@4
|
911 Protein Added: AAC45719.1 f17a F17A fimbrial adhesin
|
|
estrain@4
|
912 Protein Added: AAC45722.1 f17g F17G fimbrial adhesin
|
|
estrain@4
|
913 Protein Added: AAN68576.1 mrdH Ni(II)/Co(II) efflux transporter permease subunit MrdH
|
|
estrain@4
|
914 Protein Added: AAN68577.1 mreA metal-sensing transcriptional repressor MreA
|
|
estrain@4
|
915 Protein Added: ACT33468.1 f17a F17A fimbrial adhesin
|
|
estrain@4
|
916 Protein Added: ACT33471.1 f17g F17G fimbrial adhesin
|
|
estrain@4
|
917 Protein Added: ACT72391.1 tccP Tir-cytoskeleton coupling protein TccP
|
|
estrain@4
|
918 Protein Added: CAR47993.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
919 Protein Added: CAR48009.1 nleB type III secretion system effector arginine glycosyltransferase NleB
|
|
estrain@4
|
920 Protein Added: BAH86759.1 stx2Af Shiga toxin Stx2f subunit A
|
|
estrain@4
|
921 Protein Added: BAH86760.1 stx2Bf Shiga toxin Stx2f subunit B
|
|
estrain@4
|
922 Protein Added: BAA20338.2 merB organomercurial lyase MerB
|
|
estrain@4
|
923 Protein Added: ACU32684.1 stx2Aa Shiga toxin Stx2a subunit A
|
|
estrain@4
|
924 Protein Added: ACU65296.1 merA mercury(II) reductase
|
|
estrain@4
|
925 Protein Added: CAX45702.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
926 Protein Added: CAX45706.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
927 Protein Added: CAX45714.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
928 Protein Added: CAX45718.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
929 Protein Added: CAX45737.1 stx2Bd Shiga toxin Stx2d subunit B
|
|
estrain@4
|
930 Protein Added: CAX45739.1 stx2Ba Shiga toxin Stx2a subunit B
|
|
estrain@4
|
931 Protein Added: CAX45746.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
932 Protein Added: CAX51714.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
933 Protein Added: AAB82330.1 aafA aggregative adherence fimbria II major subunit AafA
|
|
estrain@4
|
934 Protein Added: BAI25473.1 nleC type III secretion system effector zinc metalloprotease NleC
|
|
estrain@4
|
935 Protein Added: BAI31154.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
936 Protein Added: BAI32292.1 nleB type III secretion system effector arginine glycosyltransferase NleB
|
|
estrain@4
|
937 Protein Added: BAI32327.1 espB type III secretion system LEE translocon pore-forming subunit EspB
|
|
estrain@4
|
938 Protein Added: BAI32516.1 espI serine protease autotransporter EspI
|
|
estrain@4
|
939 Protein Added: BAI33940.1 etpD variant type II secretion system secretin EtpD
|
|
estrain@4
|
940 Protein Added: BAI36256.1 nleC type III secretion system effector zinc metalloprotease NleC
|
|
estrain@4
|
941 Protein Added: BAI36790.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
942 Protein Added: BAI37513.1 nleB type III secretion system effector arginine glycosyltransferase NleB
|
|
estrain@4
|
943 Protein Added: BAI37519.1 espF type III secretion system LEE effector EspF
|
|
estrain@4
|
944 Protein Added: BAI37525.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
945 Protein Added: BAA23166.1 merG phenylmercury resistance protein MerG
|
|
estrain@4
|
946 Protein Added: AAN76093.1 iroN siderophore salmochelin receptor IroN
|
|
estrain@4
|
947 Protein Added: AAN77057.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
948 Protein Added: AAN77061.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
949 Protein Added: AAN77063.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
950 Protein Added: BAI44131.1 agg5A aggregative adherence fimbria V major subunit Agg5A
|
|
estrain@4
|
951 Protein Added: AAD12176.1 srpB solvent efflux RND transporter permease subunit SrpB
|
|
estrain@4
|
952 Protein Added: AAD12177.1 ttgI solvent efflux RND transporter outer membrane subunit SrpC
|
|
estrain@4
|
953 Protein Added: AAD12178.1 srpA solvent efflux RND transporter periplasmic adaptor subunit SrpA
|
|
estrain@4
|
954 Protein Added: AAN78874.1 vactox vacuolating autotransporter toxin Vat
|
|
estrain@4
|
955 Protein Added: AAN79707.1 iroN siderophore salmochelin receptor IroN
|
|
estrain@4
|
956 Protein Added: AAN80033.1 iss increased serum survival lipoprotein Iss
|
|
estrain@4
|
957 Protein Added: AAN83596.1 ireA TonB-dependent siderophore receptor IreA
|
|
estrain@4
|
958 Protein Added: CAB14519.1 arsC thioredoxin-dependent arsenate reductase
|
|
estrain@4
|
959 Protein Added: AAB91079.1 copB copper-binding protein CopB
|
|
estrain@4
|
960 Protein Added: CAA05105.1 copP copper-binding metallochaperone CopP
|
|
estrain@4
|
961 Protein Added: AAB88410.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
962 Protein Added: EEZ94110.1 sdeA multidrug efflux RND transporter periplasmic adaptor subunit SdeA
|
|
estrain@4
|
963 Protein Added: AAO17297.1 eatA serine protease autotransporter toxin EatA
|
|
estrain@4
|
964 Protein Added: ADA73787.1 ipaH3 T3SS effector E3 ubiquitin-protein ligase IpaH3
|
|
estrain@4
|
965 Protein Added: ADA76801.1 sepA serine protease autotransporter toxin SepA
|
|
estrain@4
|
966 Protein Added: AAO19475.1 stx1Ad Shiga toxin Stx1d subunit A
|
|
estrain@4
|
967 Protein Added: AAO19476.1 stx1Bd Shiga toxin Stx1d subunit B
|
|
estrain@4
|
968 Protein Added: ADA79992.1 merT mercuric transport protein MerT
|
|
estrain@4
|
969 Protein Added: CBG87859.1 nleB type III secretion system effector arginine glycosyltransferase NleB
|
|
estrain@4
|
970 Protein Added: CBG89712.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
971 Protein Added: CAD66214.1 vactox vacuolating autotransporter toxin Vat
|
|
estrain@4
|
972 Protein Added: ADB20445.1 toxB toxin B
|
|
estrain@4
|
973 Protein Added: CBG36837.1 eilA HilA family transcriptional regulator EilA
|
|
estrain@4
|
974 Protein Added: CBG36838.1 air inverse autotransporter adhesin EaeX/Air
|
|
estrain@4
|
975 Protein Added: CBG37385.1 aaiC type VI secretion system protein AaiC/Hcp2
|
|
estrain@4
|
976 Protein Added: CBG27762.1 aatA dispersin export ABC transporter outer membrane protein AatA
|
|
estrain@4
|
977 Protein Added: CBG27784.1 aafB aggregative adherence fimbria II minor subunit AafB
|
|
estrain@4
|
978 Protein Added: CBG27798.1 aafD aggregative adherence fimbria II chaperone AafD
|
|
estrain@4
|
979 Protein Added: CBG27800.1 aafA aggregative adherence fimbria II major subunit AafA
|
|
estrain@4
|
980 Protein Added: CBG27804.1 aggR aggregative adherence transcriptional regulator AggR
|
|
estrain@4
|
981 Protein Added: CBG27807.1 aap dispersin Aap
|
|
estrain@4
|
982 Protein Added: CBG27812.1 aar AggR-activated transcriptional regulator Aar
|
|
estrain@4
|
983 Protein Added: AAD12174.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
984 Protein Added: AAO49780.1 ttgD toluene efflux RND transporter periplasmic adaptor subunit TtgD
|
|
estrain@4
|
985 Protein Added: AAC38390.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
986 Protein Added: AAC38394.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
987 Protein Added: AAC38400.1 espF type III secretion system LEE effector EspF
|
|
estrain@4
|
988 Protein Added: BAA24822.1 arsA arsenite efflux transporter ATPase subunit ArsA
|
|
estrain@4
|
989 Protein Added: AAA20885.1 astA heat-stable enterotoxin EAST1
|
|
estrain@4
|
990 Protein Added: AAA23736.1 f17g F17G fimbrial adhesin
|
|
estrain@4
|
991 Protein Added: AAA23737.1 f17a F17A fimbrial adhesin
|
|
estrain@4
|
992 Protein Added: ADD58872.1 espF type III secretion system LEE effector EspF
|
|
estrain@4
|
993 Protein Added: ADD58881.1 eae intimin type gamma
|
|
estrain@4
|
994 Protein Added: ADD58883.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
995 Protein Added: EFF39147.1 norM sodium-coupled multidrug efflux MATE transporter NorM
|
|
estrain@4
|
996 Protein Added: AAO66617.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
997 Protein Added: BAJ04486.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
998 Protein Added: BAJ04488.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
999 Protein Added: AAC38219.1 merP mercury resistance system periplasmic binding protein MerP
|
|
estrain@4
|
1000 Protein Added: AAC38220.1 merA mercury(II) reductase
|
|
estrain@4
|
1001 Protein Added: AAC38221.1 merD mercury resistance co-regulator MerD
|
|
estrain@4
|
1002 Protein Added: ADE90928.1 vactox vacuolating autotransporter toxin Vat
|
|
estrain@4
|
1003 Protein Added: AAC38229.1 merR mercury resistance transcriptional regulator MerR
|
|
estrain@4
|
1004 Protein Added: AAC38230.1 merB organomercurial lyase MerB
|
|
estrain@4
|
1005 Protein Added: AAC38231.1 merT mercuric transport protein MerT
|
|
estrain@4
|
1006 Protein Added: AAC38232.1 merP mercury resistance system periplasmic binding protein MerP
|
|
estrain@4
|
1007 Protein Added: AAC38233.1 merC organomercurial transporter MerC
|
|
estrain@4
|
1008 Protein Added: AAC38236.1 merE broad-spectrum mercury transporter MerE
|
|
estrain@4
|
1009 Protein Added: ADF64798.1 ncrC Ni(II)/Co(II) efflux transporter permease subunit NcrC
|
|
estrain@4
|
1010 Protein Added: CBK85583.1 iroN siderophore salmochelin receptor IroN
|
|
estrain@4
|
1011 Protein Added: CBL93318.1 capU putative hexosyltransferase CapU
|
|
estrain@4
|
1012 Protein Added: CBL93506.1 lngA type IV pilus longus major pilin
|
|
estrain@4
|
1013 Protein Added: ADI59685.1 astA heat-stable enterotoxin EAST1
|
|
estrain@4
|
1014 Protein Added: ADI95409.1 ttgE multidrug efflux RND transporter permease subunit TtgE
|
|
estrain@4
|
1015 Protein Added: ADI95411.1 ttgT efflux transport transcriptional regulator TtgT
|
|
estrain@4
|
1016 Protein Added: AAP03990.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
1017 Protein Added: AAP18950.1 lpfA long polar fimbria major subunit LpfA-O113
|
|
estrain@4
|
1018 Protein Added: ADK23698.1 qacR multidrug-binding transcriptional regulator QacR
|
|
estrain@4
|
1019 Protein Added: ADK73987.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1020 Protein Added: AAM22256.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
1021 Protein Added: AAM22257.1 stx2Bd Shiga toxin Stx2d subunit B
|
|
estrain@4
|
1022 Protein Added: CAD56174.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
1023 Protein Added: CAD56186.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
1024 Protein Added: AAA16360.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
1025 Protein Added: AAA16361.1 stx2Bb Shiga toxin Stx2b subunit B
|
|
estrain@4
|
1026 Protein Added: AAA16362.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1027 Protein Added: ADM83435.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
1028 Protein Added: ADN71659.1 iss increased serum survival lipoprotein Iss
|
|
estrain@4
|
1029 Protein Added: AAP37403.1 stx2Ag Shiga toxin Stx2g subunit A
|
|
estrain@4
|
1030 Protein Added: AAC26634.1 pet serine protease autotransporter toxin Pet
|
|
estrain@4
|
1031 Protein Added: CBJ04488.1 cfaC CFA/I pilus usher protein CfaC
|
|
estrain@4
|
1032 Protein Added: AAC15683.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1033 Protein Added: ADO96486.1 hmrM sodium-coupled multidrug efflux MATE transporter HmrM
|
|
estrain@4
|
1034 Protein Added: ADP02162.1 merA mercury(II) reductase
|
|
estrain@4
|
1035 Protein Added: CAA73506.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
1036 Protein Added: ADR26561.1 iss increased serum survival lipoprotein Iss
|
|
estrain@4
|
1037 Protein Added: ADR70747.1 copA laccase-like oxidase CopA
|
|
estrain@4
|
1038 Protein Added: ADR70748.1 copB copper-binding protein CopB
|
|
estrain@4
|
1039 Protein Added: BAC77251.1 sdeY multidrug efflux RND transporter permease subunit SdeY
|
|
estrain@4
|
1040 Protein Added: ADW66881.1 arsH arsenic resistance NADPH-dependent reductase ArsH
|
|
estrain@4
|
1041 Protein Added: AAP78989.1 ipaD type III secretion system needle tip complex protein IpaD
|
|
estrain@4
|
1042 Protein Added: BAC78639.1 stx1Aa Shiga toxin Stx1a subunit A
|
|
estrain@4
|
1043 Protein Added: BAC78640.1 stx1Ba Shiga toxin Stx1a subunit B
|
|
estrain@4
|
1044 Protein Added: AAC69314.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1045 Protein Added: AAC69318.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1046 Protein Added: BAJ79293.1 aafA aggregative adherence fimbria II major subunit AafA
|
|
estrain@4
|
1047 Protein Added: BAJ79295.1 aafA aggregative adherence fimbria II major subunit AafA
|
|
estrain@4
|
1048 Protein Added: BAJ79296.1 aafA aggregative adherence fimbria II major subunit AafA
|
|
estrain@4
|
1049 Protein Added: BAJ79297.1 aafA aggregative adherence fimbria II major subunit AafA
|
|
estrain@4
|
1050 Protein Added: BAJ79299.1 agg5A aggregative adherence fimbria V major subunit Agg5A
|
|
estrain@4
|
1051 Protein Added: BAJ79300.1 agg5A aggregative adherence fimbria V major subunit Agg5A
|
|
estrain@4
|
1052 Protein Added: ADY84088.1 nreB nickel resistance MFS transporter NreB
|
|
estrain@4
|
1053 Protein Added: AAC24352.1 ehxA enterohemolysin
|
|
estrain@4
|
1054 Protein Added: ADZ45128.1 ehxA enterohemolysin
|
|
estrain@4
|
1055 Protein Added: AAP88295.1 copA laccase-like oxidase CopA
|
|
estrain@4
|
1056 Protein Added: AEC46567.1 copA laccase-like oxidase CopA
|
|
estrain@4
|
1057 Protein Added: AEC46568.1 copB copper-binding protein CopB
|
|
estrain@4
|
1058 Protein Added: AAC38671.1 ttgB multidrug efflux RND transporter permease subunit TtgB
|
|
estrain@4
|
1059 Protein Added: BAA31774.1 ehxA enterohemolysin
|
|
estrain@4
|
1060 Protein Added: BAA31815.1 toxB toxin B
|
|
estrain@4
|
1061 Protein Added: BAA31832.1 katP catalase/peroxidase KatP
|
|
estrain@4
|
1062 Protein Added: BAA31836.1 espP serine protease autotransporter EspP
|
|
estrain@4
|
1063 Protein Added: AAQ17236.1 mco multi-copper oxidase Mco
|
|
estrain@4
|
1064 Protein Added: AAQ17546.1 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
1065 Protein Added: CAA74174.1 espB type III secretion system LEE translocon pore-forming subunit EspB
|
|
estrain@4
|
1066 Protein Added: AEG95593.1 iroN siderophore salmochelin receptor IroN
|
|
estrain@4
|
1067 Protein Added: AAQ20107.1 cfaC CFA/I pilus usher protein CfaC
|
|
estrain@4
|
1068 Protein Added: AEK01061.1 iroN siderophore salmochelin receptor IroN
|
|
estrain@4
|
1069 Protein Added: AAC31499.1 espB type III secretion system LEE translocon pore-forming subunit EspB
|
|
estrain@4
|
1070 Protein Added: AAY90617.2 emhA efflux RND transporter periplasmic adaptor subunit EmhA
|
|
estrain@4
|
1071 Protein Added: CAA12346.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
1072 Protein Added: CAA12348.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
1073 Protein Added: AEM17342.1 cdtB cytolethal distending toxin nuclease subunit CdtB
|
|
estrain@4
|
1074 Protein Added: AAC33154.1 lngA type IV pilus longus major pilin
|
|
estrain@4
|
1075 Protein Added: AEQ14997.1 eilA HilA family transcriptional regulator EilA
|
|
estrain@4
|
1076 Protein Added: AEQ15694.1 capU putative hexosyltransferase CapU
|
|
estrain@4
|
1077 Protein Added: AAC33908.1 merC organomercurial transporter MerC
|
|
estrain@4
|
1078 Protein Added: CCE21264.1 agg3A aggregative adherence fimbria 3 major subunit Agg3A
|
|
estrain@4
|
1079 Protein Added: EHE72460.1 pmrA multidrug efflux MFS transporter PmrA
|
|
estrain@4
|
1080 Protein Added: EHF16244.1 aatA dispersin export ABC transporter outer membrane protein AatA
|
|
estrain@4
|
1081 Protein Added: EHF16297.1 aggB aggregative adherence fimbria I minor subunit AggB
|
|
estrain@4
|
1082 Protein Added: EHF16298.1 aggA aggregative adherence fimbria I major subunit AggA
|
|
estrain@4
|
1083 Protein Added: AET11941.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
1084 Protein Added: AET11995.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
1085 Protein Added: AET12008.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
1086 Protein Added: BAL46940.1 eae intimin type alpha
|
|
estrain@4
|
1087 Protein Added: BAL46941.1 eae intimin type epsilon
|
|
estrain@4
|
1088 Protein Added: BAL47132.1 eae intimin type epsilon
|
|
estrain@4
|
1089 Protein Added: BAL47176.1 eae intimin type rho
|
|
estrain@4
|
1090 Protein Added: BAL47179.1 eae intimin type epsilon
|
|
estrain@4
|
1091 Protein Added: BAL47181.1 eae intimin type alpha
|
|
estrain@4
|
1092 Protein Added: AEZ42789.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1093 Protein Added: AEZ43710.1 nleA type III secretion system effector NleA
|
|
estrain@4
|
1094 Protein Added: AAQ92182.1 emhC efflux RND transporter outer membrane subunit EmhC
|
|
estrain@4
|
1095 Protein Added: CAA77068.1 aggA aggregative adherence fimbria I major subunit AggA
|
|
estrain@4
|
1096 Protein Added: AAR02190.1 aggA aggregative adherence fimbria I major subunit AggA
|
|
estrain@4
|
1097 Protein Added: BAL72684.1 cdtB cytolethal distending toxin nuclease subunit CdtB
|
|
estrain@4
|
1098 Protein Added: BAL72697.1 cdtB cytolethal distending toxin nuclease subunit CdtB
|
|
estrain@4
|
1099 Protein Added: AAR12207.1 cdtB cytolethal distending toxin type III/V nuclease subunit CdtB
|
|
estrain@4
|
1100 Protein Added: AAC69584.1 ybtQ yersiniabactin ABC transporter ATP-binding/permease protein YbtQ
|
|
estrain@4
|
1101 Protein Added: AAR13270.1 iroN siderophore salmochelin receptor IroN
|
|
estrain@4
|
1102 Protein Added: AFH14350.1 faeG F4 fimbrial adhesin subunit FaeG
|
|
estrain@4
|
1103 Protein Added: CAD87828.1 sta1 heat-stable enterotoxin ST-I group a
|
|
estrain@4
|
1104 Protein Added: BAA34299.1 mexX multidrug efflux RND transporter periplasmic adaptor subunit MexX
|
|
estrain@4
|
1105 Protein Added: AFK88558.1 auto-sat serine protease autotransporter toxin Sat
|
|
estrain@4
|
1106 Protein Added: AFM31243.1 tccP Tir-cytoskeleton coupling protein TccP2
|
|
estrain@4
|
1107 Protein Added: AFM70729.1 copA copper-translocating P-type ATPase CopA
|
|
estrain@4
|
1108 Protein Added: AFM70730.1 copB copper/silver-translocating P-type ATPase CopB
|
|
estrain@4
|
1109 Protein Added: AAC82360.1 espB type III secretion system LEE translocon pore-forming subunit EspB
|
|
estrain@4
|
1110 Protein Added: AAR82963.1 nirA nickel resistance membrane nickel efflux protein NirA
|
|
estrain@4
|
1111 Protein Added: AAR82964.1 nirB nickel-sensing transcriptional repressor NirB
|
|
estrain@4
|
1112 Protein Added: AAR82966.1 nirD nickel resistance OB fold protein NirD
|
|
estrain@4
|
1113 Protein Added: AFQ65076.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
1114 Protein Added: CAA50007.1 cnf1 cytotoxic necrotizing factor CNF1
|
|
estrain@4
|
1115 Protein Added: CAA12345.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
1116 Protein Added: CAA12350.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
1117 Protein Added: CAA12351.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
1118 Protein Added: AFS59871.1 sepA serine protease autotransporter toxin SepA
|
|
estrain@4
|
1119 Protein Added: AFS85685.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
1120 Protein Added: AAC99337.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
1121 Protein Added: CAA21388.1 ybtP yersiniabactin ABC transporter ATP-binding/permease protein YbtP
|
|
estrain@4
|
1122 Protein Added: BAA36431.1 merR mercury resistance transcriptional regulator MerR
|
|
estrain@4
|
1123 Protein Added: BAA36433.1 merD mercury resistance co-regulator MerD
|
|
estrain@4
|
1124 Protein Added: CAA40744.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
1125 Protein Added: CAA23532.1 ltcA heat-labile enterotoxin LT subunit A
|
|
estrain@4
|
1126 Protein Added: CAA32535.1 fim41a fimbrial adhesin F41 protein Fim41a
|
|
estrain@4
|
1127 Protein Added: AAD05936.1 copP copper-binding metallochaperone CopP
|
|
estrain@4
|
1128 Protein Added: AAS07580.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1129 Protein Added: AAS07581.1 stx2Bc Shiga toxin Stx2c subunit B
|
|
estrain@4
|
1130 Protein Added: AAS07582.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1131 Protein Added: AAS07586.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
1132 Protein Added: AAS07588.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
1133 Protein Added: AAS07589.1 stx2Bd Shiga toxin Stx2d subunit B
|
|
estrain@4
|
1134 Protein Added: AAS07590.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1135 Protein Added: AAS07596.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1136 Protein Added: AAS07600.1 stx2Aa Shiga toxin Stx2a subunit A
|
|
estrain@4
|
1137 Protein Added: AAS07606.1 stx2Aa Shiga toxin Stx2a subunit A
|
|
estrain@4
|
1138 Protein Added: AAD11743.1 silE silver-binding protein SilE
|
|
estrain@4
|
1139 Protein Added: AAD11746.1 silC Cu(+)/Ag(+) efflux RND transporter outer membrane channel SilC
|
|
estrain@4
|
1140 Protein Added: AAD11748.1 silB Cu(+)/Ag(+) efflux RND transporter periplasmic adaptor subunit SilB
|
|
estrain@4
|
1141 Protein Added: AAD11749.1 silA Cu(+)/Ag(+) efflux RND transporter permease subunit SilA
|
|
estrain@4
|
1142 Protein Added: AAD11750.1 silP Ag(+)-translocating P-type ATPase SilP
|
|
estrain@4
|
1143 Protein Added: AFX83959.1 subA subtilase AB5 cytotoxin subunit A
|
|
estrain@4
|
1144 Protein Added: AAS21297.1 tbtR tribuytltin resistance regulator TbtR
|
|
estrain@4
|
1145 Protein Added: CAA43585.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
1146 Protein Added: AAD15663.1 tbtA multidrug efflux RND transporter periplasmic adaptor subunit TbtA
|
|
estrain@4
|
1147 Protein Added: AAD15664.1 tbtB multidrug efflux RND transporter permease subunit TbtB
|
|
estrain@4
|
1148 Protein Added: AAD15665.1 tbtM multidrug efflux RND transporter outer membrane channel subunit TbtM
|
|
estrain@4
|
1149 Protein Added: AAD17509.1 f17a F17A fimbrial adhesin
|
|
estrain@4
|
1150 Protein Added: AAD17510.1 f17a F17A fimbrial adhesin
|
|
estrain@4
|
1151 Protein Added: AAD17511.1 f17a F17A fimbrial adhesin
|
|
estrain@4
|
1152 Protein Added: AAD17513.1 f17g F17G fimbrial adhesin
|
|
estrain@4
|
1153 Protein Added: AAD17514.1 f17g F17G fimbrial adhesin
|
|
estrain@4
|
1154 Protein Added: AAD17515.1 f17g F17G fimbrial adhesin
|
|
estrain@4
|
1155 Protein Added: AAA18786.1 cdtB cytolethal distending toxin type II nuclease subunit CdtB
|
|
estrain@4
|
1156 Protein Added: CAA77320.1 merR mercury resistance transcriptional regulator MerR
|
|
estrain@4
|
1157 Protein Added: CAA77324.1 merD mercury resistance co-regulator MerD
|
|
estrain@4
|
1158 Protein Added: CAA77325.1 merE broad-spectrum mercury transporter MerE
|
|
estrain@4
|
1159 Protein Added: CAA81047.1 mtrR multidrug efflux system transcriptional repressor MtrR
|
|
estrain@4
|
1160 Protein Added: AAA74436.1 mexA multidrug efflux RND transporter periplasmic adaptor subunit MexA
|
|
estrain@4
|
1161 Protein Added: AGC14252.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
1162 Protein Added: AAS47019.1 nleC type III secretion system effector zinc metalloprotease NleC
|
|
estrain@4
|
1163 Protein Added: AGC85979.1 iss increased serum survival lipoprotein Iss
|
|
estrain@4
|
1164 Protein Added: CCG33322.1 iroN siderophore salmochelin receptor IroN
|
|
estrain@4
|
1165 Protein Added: AAS50165.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
1166 Protein Added: AAO18187.2 sdeB multidrug efflux RND transporter permease subunit SdeB
|
|
estrain@4
|
1167 Protein Added: AAA98221.1 merR mercury resistance transcriptional regulator MerR
|
|
estrain@4
|
1168 Protein Added: AAS76847.1 fedA F18 fimbrial major subunit FedA
|
|
estrain@4
|
1169 Protein Added: AAD25959.1 merR2 mercury resistance transcriptional regulator MerR2
|
|
estrain@4
|
1170 Protein Added: AAA98245.1 merA mercury(II) reductase
|
|
estrain@4
|
1171 Protein Added: AAD27810.1 aafC aggregative adherence fimbria II usher protein AafC
|
|
estrain@4
|
1172 Protein Added: AAA24698.1 tsh temperature-sensitive protease autotransporter hemagglutinin Tsh
|
|
estrain@4
|
1173 Protein Added: CAE82650.1 faeG F4 fimbrial adhesin subunit FaeG
|
|
estrain@4
|
1174 Protein Added: CAE82653.1 faeG F4 fimbrial adhesin subunit FaeG
|
|
estrain@4
|
1175 Protein Added: CAE82670.1 faeG F4 fimbrial adhesin subunit FaeG
|
|
estrain@4
|
1176 Protein Added: AAD28079.1 hlyE hemolysin HlyE
|
|
estrain@4
|
1177 Protein Added: CAA83535.1 aggR aggregative adherence transcriptional regulator AggR
|
|
estrain@4
|
1178 Protein Added: EMS03085.1 aggA aggregative adherence fimbria I major subunit AggA
|
|
estrain@4
|
1179 Protein Added: CAE55775.1 auto-sat serine protease autotransporter toxin Sat
|
|
estrain@4
|
1180 Protein Added: AAT36311.1 rpeA serine protease autotransporter colonization factor RpeA
|
|
estrain@4
|
1181 Protein Added: BAA77749.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
1182 Protein Added: BAA77750.1 stx2Bb Shiga toxin Stx2b subunit B
|
|
estrain@4
|
1183 Protein Added: BAA77751.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
1184 Protein Added: CAA46767.1 stx2Ab Shiga toxin Stx2b subunit A
|
|
estrain@4
|
1185 Protein Added: CAA46768.1 stx2Bb Shiga toxin Stx2b subunit B
|
|
estrain@4
|
1186 Protein Added: CAA77936.1 emrE multidrug efflux SMR transporter EmrE
|
|
estrain@4
|
1187 Protein Added: AAT65972.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1188 Protein Added: AAT66000.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1189 Protein Added: AAT66010.1 stx2Aa Shiga toxin Stx2a subunit A
|
|
estrain@4
|
1190 Protein Added: AAT66011.1 stx2Ba Shiga toxin Stx2a subunit B
|
|
estrain@4
|
1191 Protein Added: AAT66012.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1192 Protein Added: AGL46515.1 merF mercury resistance system transport protein MerF
|
|
estrain@4
|
1193 Protein Added: AAT68784.1 subB subtilase AB5 cytotoxin subunit B
|
|
estrain@4
|
1194 Protein Added: AAT68785.1 subA subtilase AB5 cytotoxin subunit A
|
|
estrain@4
|
1195 Protein Added: AAT76975.1 lpfA long polar fimbria major subunit LpfA-O113
|
|
estrain@4
|
1196 Protein Added: AAD39553.1 ttgA toluene efflux RND transporter periplasmic adaptor subunit TtgA
|
|
estrain@4
|
1197 Protein Added: AAU01878.1 sepA serine protease autotransporter toxin SepA
|
|
estrain@4
|
1198 Protein Added: AAN38824.2 adeE multidrug efflux RND transporter permease subunit AdeE
|
|
estrain@4
|
1199 Protein Added: AAU10477.1 adeD multidrug efflux RND transporter periplasmic adaptor subunit AdeD
|
|
estrain@4
|
1200 Protein Added: AAU88208.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1201 Protein Added: AAU88264.1 cdtB cytolethal distending toxin nuclease subunit CdtB
|
|
estrain@4
|
1202 Protein Added: AAA57451.1 aggD aggregative adherence fimbria I chaperone AggD
|
|
estrain@4
|
1203 Protein Added: AAA57452.1 aggC aggregative adherence fimbria I usher protein AggC
|
|
estrain@4
|
1204 Protein Added: AAA57453.1 aggB aggregative adherence fimbria I minor subunit AggB
|
|
estrain@4
|
1205 Protein Added: AAA57454.1 aggA aggregative adherence fimbria I major subunit AggA
|
|
estrain@4
|
1206 Protein Added: CAA85366.1 stx1Aa Shiga toxin Stx1a subunit A
|
|
estrain@4
|
1207 Protein Added: CAA85368.1 stx1Aa Shiga toxin Stx1a subunit A
|
|
estrain@4
|
1208 Protein Added: CAA85370.1 stx1Ac Shiga toxin Stx1c subunit A
|
|
estrain@4
|
1209 Protein Added: CAA85371.1 stx1Bc Shiga toxin Stx1c subunit B
|
|
estrain@4
|
1210 Protein Added: EQX61716.1 aggA aggregative adherence fimbria I major subunit AggA
|
|
estrain@4
|
1211 Protein Added: AAU95470.1 nleB type III secretion system effector arginine glycosyltransferase NleB
|
|
estrain@4
|
1212 Protein Added: AAU95768.1 mepA multidrug efflux MATE transporter MepA
|
|
estrain@4
|
1213 Protein Added: CAG17536.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1214 Protein Added: CAG17541.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
1215 Protein Added: AAD43578.1 astA heat-stable enterotoxin EAST1
|
|
estrain@4
|
1216 Protein Added: AAD43579.1 astA heat-stable enterotoxin EAST1
|
|
estrain@4
|
1217 Protein Added: CAA85780.1 stx2Aa Shiga toxin Stx2a subunit A
|
|
estrain@4
|
1218 Protein Added: AAA80193.1 mtrC multidrug efflux RND transporter periplasmic adaptor subunit MtrC
|
|
estrain@4
|
1219 Protein Added: AAD44693.1 mtrA efflux transporter MtrCDE transcriptional activator MtrA
|
|
estrain@4
|
1220 Protein Added: AAD47284.1 terZ tellurium resistance-associated protein TerZ
|
|
estrain@4
|
1221 Protein Added: AAW38464.1 lmrS multidrug efflux MFS transporter LmrS
|
|
estrain@4
|
1222 Protein Added: CAI43856.1 espF type III secretion system LEE effector EspF
|
|
estrain@4
|
1223 Protein Added: CAI43860.1 espB type III secretion system LEE translocon pore-forming subunit EspB
|
|
estrain@4
|
1224 Protein Added: CAI43862.1 espA type III secretion system LEE translocon filament protein EspA
|
|
estrain@4
|
1225 Protein Added: CAI43865.1 eae intimin type epsilon
|
|
estrain@4
|
1226 Protein Added: CAI43867.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1227 Protein Added: AAD54074.1 farB fatty acid resistance MFS efflux transporter permease subunit FarB
|
|
estrain@4
|
1228 Protein Added: BAA84838.1 bfpA bundle-forming pilus major subunit BfpA
|
|
estrain@4
|
1229 Protein Added: BAA84859.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
1230 Protein Added: AAT35241.2 tsh temperature-sensitive protease autotransporter hemagglutinin Tsh
|
|
estrain@4
|
1231 Protein Added: AAF03351.1 espF type III secretion system LEE effector EspF
|
|
estrain@4
|
1232 Protein Added: AHW84565.1 aaiC type VI secretion system protein AaiC/Hcp2
|
|
estrain@4
|
1233 Protein Added: AHW84567.1 aaiC type VI secretion system protein AaiC/Hcp2
|
|
estrain@4
|
1234 Protein Added: AAX47728.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1235 Protein Added: AAX47729.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1236 Protein Added: AAX47730.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1237 Protein Added: AAX47731.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1238 Protein Added: CAA58525.1 pcoA multicopper oxidase PcoA
|
|
estrain@4
|
1239 Protein Added: CAA58526.1 pcoB copper-binding protein PcoB
|
|
estrain@4
|
1240 Protein Added: CAA58527.1 pcoC copper resistance system metallochaperone PcoC
|
|
estrain@4
|
1241 Protein Added: CAA58528.1 pcoD copper resistance inner membrane protein PcoD
|
|
estrain@4
|
1242 Protein Added: CAA58529.1 pcoR copper response regulator transcription factor PcoR
|
|
estrain@4
|
1243 Protein Added: CAA58530.1 pcoS copper resistance membrane spanning protein PcoS
|
|
estrain@4
|
1244 Protein Added: CAA58532.1 pcoE copper resistance system metallochaperone PcoE
|
|
estrain@4
|
1245 Protein Added: AAX63244.1 fedF F18 fimbrial adhesin subunit FedF
|
|
estrain@4
|
1246 Protein Added: AAX63245.1 fedF F18 fimbrial adhesin subunit FedF
|
|
estrain@4
|
1247 Protein Added: AAX63259.1 fedF F18 fimbrial adhesin subunit FedF
|
|
estrain@4
|
1248 Protein Added: AAX63270.1 fedF F18 fimbrial adhesin subunit FedF
|
|
estrain@4
|
1249 Protein Added: AAY25390.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1250 Protein Added: AAY25394.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1251 Protein Added: AAY25395.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1252 Protein Added: AAF14522.1 mexX multidrug efflux RND transporter periplasmic adaptor subunit MexX
|
|
estrain@4
|
1253 Protein Added: CAI91198.1 stx2Ag Shiga toxin Stx2g subunit A
|
|
estrain@4
|
1254 Protein Added: AAF16681.1 srpS solvent efflux transporter transcriptional repressor SrpS
|
|
estrain@4
|
1255 Protein Added: AAF16682.1 srpR solvent efflux transporter antirepressor SrpR
|
|
estrain@4
|
1256 Protein Added: CAA54115.1 nfaE Dr family non-fimbrial adhesin I chaperone NfaE
|
|
estrain@4
|
1257 Protein Added: AAF23359.1 eae intimin type epsilon
|
|
estrain@4
|
1258 Protein Added: CAB64953.1 stx2Af Shiga toxin Stx2f subunit A
|
|
estrain@4
|
1259 Protein Added: AAY63864.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
1260 Protein Added: AAY63865.1 stx2Bd Shiga toxin Stx2d subunit B
|
|
estrain@4
|
1261 Protein Added: CDY80020.1 hsp20 small heat shock protein sHSP20
|
|
estrain@4
|
1262 Protein Added: AAY90615.1 emhC efflux RND transporter outer membrane subunit EmhC
|
|
estrain@4
|
1263 Protein Added: KGL71342.1 silF Ag(+)/Cu(+) efflux RND transporter periplasmic metallochaperone SilF
|
|
estrain@4
|
1264 Protein Added: AAF40764.1 farB fatty acid resistance MFS efflux transporter permease subunit FarB
|
|
estrain@4
|
1265 Protein Added: AAF42063.1 mtrC multidrug efflux RND transporter periplasmic adaptor subunit MtrC
|
|
estrain@4
|
1266 Protein Added: AAB26855.2 nfaE Dr family non-fimbrial adhesin I chaperone NfaE
|
|
estrain@4
|
1267 Protein Added: CAB82448.1 cnrY nickel resistance system anti-sigma factor CnrY
|
|
estrain@4
|
1268 Protein Added: AAZ76497.1 ehxA enterohemolysin
|
|
estrain@4
|
1269 Protein Added: AAZ76514.1 espP serine protease autotransporter EspP
|
|
estrain@4
|
1270 Protein Added: AAZ76524.1 subA subtilase AB5 cytotoxin subunit A
|
|
estrain@4
|
1271 Protein Added: AAZ87985.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
|
|
estrain@4
|
1272 Protein Added: AAZ88030.1 ipaH3 T3SS effector E3 ubiquitin-protein ligase IpaH3
|
|
estrain@4
|
1273 Protein Added: AAZ89804.1 sigA serine protease autotransporter toxin SigA
|
|
estrain@4
|
1274 Protein Added: AAZ91108.1 ipaD type III secretion system needle tip complex protein IpaD
|
|
estrain@4
|
1275 Protein Added: ABA25986.1 merF mercury resistance system transport protein MerF
|
|
estrain@4
|
1276 Protein Added: AAX22079.2 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
1277 Protein Added: AAA65102.1 nccX periplasmic metal sensor NccX
|
|
estrain@4
|
1278 Protein Added: AAA65103.1 nccH nickel/cobalt/cadmium resistance ECF sigma factor NccH
|
|
estrain@4
|
1279 Protein Added: ABB16332.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1280 Protein Added: ABB36584.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1281 Protein Added: ABB36586.1 stx2Ad Shiga toxin Stx2d subunit A
|
|
estrain@4
|
1282 Protein Added: ABB61187.1 iroN siderophore salmochelin receptor IroN
|
|
estrain@4
|
1283 Protein Added: ABB62096.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
|
|
estrain@4
|
1284 Protein Added: ABB62098.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
|
|
estrain@4
|
1285 Protein Added: ABB64677.1 ipaD type III secretion system needle tip complex protein IpaD
|
|
estrain@4
|
1286 Protein Added: ABB65884.1 ipaH3 T3SS effector E3 ubiquitin-protein ligase IpaH3
|
|
estrain@4
|
1287 Protein Added: ABB66229.1 ipaH9.8 T3SS effector E3 ubiquitin-protein ligase IpaH9.8
|
|
estrain@4
|
1288 Protein Added: ABB68924.1 virF AraC family invasion system transcriptional regulator VirF
|
|
estrain@4
|
1289 Protein Added: KLB41245.1 copL transcriptional regulator CopL
|
|
estrain@4
|
1290 Protein Added: CAI79539.1 eatA serine protease autotransporter toxin EatA
|
|
estrain@4
|
1291 Protein Added: CAJ44959.1 mchF microcin H47 export transporter peptidase/ATP-binding subunit MchF
|
|
estrain@4
|
1292 Protein Added: CAB77169.2 stx2Ae Shiga toxin Stx2e subunit A
|
|
estrain@4
|
1293 Protein Added: CAB94149.1 stx2Ba Shiga toxin Stx2a subunit B
|
|
estrain@4
|
1294 Protein Added: AAC34727.1 faeG F4 fimbrial adhesin subunit FaeG
|
|
estrain@4
|
1295 Protein Added: BAA96815.1 tir type III secretion system LEE translocated intimin receptor Tir
|
|
estrain@4
|
1296 Protein Added: AAA69514.1 f17g F17G fimbrial adhesin
|
|
estrain@4
|
1297 Protein Added: CAA88252.1 sepA serine protease autotransporter toxin SepA
|
|
estrain@4
|
1298 Protein Added: BAE79899.1 smfY multidrug efflux MFS transporter SmfY
|
|
estrain@4
|
1299 Protein Added: ABE06598.1 sfaS S-fimbrial adhesin minor subunit SfaS
|
|
estrain@4
|
1300 Protein Added: ABE10324.1 cnf1 cytotoxic necrotizing factor CNF1
|
|
estrain@4
|
1301 Protein Added: CAJ34994.1 bfpA bundle-forming pilus major subunit BfpA
|
|
estrain@4
|
1302 Protein Added: ABF13034.1 merD mercury resistance co-regulator MerD
|
|
estrain@4
|
1303 Protein Added: ABF13067.1 cnrC nickel efflux RND transporter outer membrane subunit CnrC
|
|
estrain@4
|
1304 Protein Added: ABF13069.1 cnrA nickel efflux RND transporter permease subunit CnrA
|
|
estrain@4
|
1305 Protein Added: ABF13070.1 cnrT nickel diffusion facilitator CnrT
|
|
estrain@4
|
1306 Protein Added: ABF14406.1 ncrA Metal Resistance
|
|
estrain@4
|
1307 Protein Added: ABF14407.1 ncrB nickel-sensing transcriptional repressor NcrB
|
|
estrain@4
|
1308 Protein Added: CAK02719.1 cnf1 cytotoxic necrotizing factor CNF1
|
|
estrain@4
|
1309 Protein Added: CAA90630.1 stx2Aa Shiga toxin Stx2a subunit A
|
|
estrain@4
|
1310 Protein Added: BAT41861.1 eae intimin type alpha
|
|
estrain@4
|
1311 Protein Added: CAK15125.1 mexE MexE family multidrug efflux RND transporter periplasmic adaptor subunit
|
|
estrain@4
|
1312 Protein Added: AAG01033.1 stx2Ac Shiga toxin Stx2c subunit A
|
|
estrain@4
|
1313 Protein Added: AAB59153.1 cadC Cd(II)/Pb(II)/Zn(II)-sensing metalloregulatory transcriptional repressor CadC
|
|
estrain@4
|
1314 Protein Added: ABF61434.1 ncrA Metal Resistance
|
|
estrain@4
|
1315 Protein Added: ABF61435.1 ncrB nickel-sensing transcriptional repressor NcrB
|
|
estrain@4
|
1316 Protein Added: ABF61437.1 ncrY nickel resistance OB fold protein NcrY
|
|
estrain@4
|
1317 Protein Added: AAG05881.1 mexE MexE family multidrug efflux RND transporter periplasmic adaptor subunit
|
|
estrain@4
|
1318 Protein Added: AAG10695.1 perA BFP system transcriptional regulator PerA
|
|
estrain@4
|
1319 Protein Added: WP_000697899.1 pmrA pmrA
|
|
estrain@4
|
1320 Protein Added: WP_097509477.1 acrB acrB
|
|
estrain@4
|
1321
|
|
estrain@4
|
1322 - AMRFinder HMM library Changes:
|
|
estrain@4
|
1323 Prev. Release: 574
|
|
estrain@4
|
1324 This Release: 610
|
|
estrain@4
|
1325 Removed: 2
|
|
estrain@4
|
1326 Added: 38
|
|
estrain@4
|
1327 Changed: 572
|
|
estrain@4
|
1328 HMM Removed: NF000478.2 linco_LnuE
|
|
estrain@4
|
1329 HMM Removed: NF012180.1 tet_MFS_43
|
|
estrain@4
|
1330 HMM Added: NF000131.1 MATE_multi_MepA
|
|
estrain@4
|
1331 HMM Added: NF000249.1 MexE
|
|
estrain@4
|
1332 HMM Added: NF000252.1 MexX
|
|
estrain@4
|
1333 HMM Added: NF000263.1 MATE_multi_NorM
|
|
estrain@4
|
1334 HMM Added: NF000282.2 RND_permease_1
|
|
estrain@4
|
1335 HMM Added: NF000314.1 adeB
|
|
estrain@4
|
1336 HMM Added: NF000315.1 adeC-adeK-oprM
|
|
estrain@4
|
1337 HMM Added: NF000336.1 emrE
|
|
estrain@4
|
1338 HMM Added: NF007842.1 PRK10555.1
|
|
estrain@4
|
1339 HMM Added: NF010310.2 PRK13747.1
|
|
estrain@4
|
1340 HMM Added: NF010315.0 PRK13752.1
|
|
estrain@4
|
1341 HMM Added: NF011706.2 PRK15127.1
|
|
estrain@4
|
1342 HMM Added: NF028537.1 P_eth_NH2_trans
|
|
estrain@4
|
1343 HMM Added: NF033086.2 penta_rpt_Qnr
|
|
estrain@4
|
1344 HMM Added: NF033134.0 cmlA_floR
|
|
estrain@4
|
1345 HMM Added: NF033142.1 efflux_OM_AdeC
|
|
estrain@4
|
1346 HMM Added: NF033143.1 efflux_OM_AdeK
|
|
estrain@4
|
1347 HMM Added: NF033555.1 lyase_MerB
|
|
estrain@4
|
1348 HMM Added: NF033560.1 merT_RC607
|
|
estrain@4
|
1349 HMM Added: NF033565.0 trans_MerF
|
|
estrain@4
|
1350 HMM Added: NF033627.3 intimin_all
|
|
estrain@4
|
1351 HMM Added: NF033637.1 transloc_TIR
|
|
estrain@4
|
1352 HMM Added: NF033639.1 intimin_alpha
|
|
estrain@4
|
1353 HMM Added: NF033643.1 EspJ_gen
|
|
estrain@4
|
1354 HMM Added: NF033646.1 toxin_EAST1
|
|
estrain@4
|
1355 HMM Added: NF033651.1 cyto_nec_fctrs
|
|
estrain@4
|
1356 HMM Added: NF033658.1 Shiga_Stx1A
|
|
estrain@4
|
1357 HMM Added: NF033659.0 Shiga_Stx1B
|
|
estrain@4
|
1358 HMM Added: NF033660.0 Shiga_Stx2B
|
|
estrain@4
|
1359 HMM Added: NF033661.1 Shiga_Stx2A
|
|
estrain@4
|
1360 HMM Added: NF033727.1 chaperon_ArsD
|
|
estrain@4
|
1361 HMM Added: NF033781.1 chaper_CopP
|
|
estrain@4
|
1362 HMM Added: NF033783.1 coreg_MerD
|
|
estrain@4
|
1363 HMM Added: NF033784.1 transport_merC
|
|
estrain@4
|
1364 HMM Added: NF033786.1 phenyl_MerG
|
|
estrain@4
|
1365 HMM Added: NF033834.1 RND_adapt_MexA
|
|
estrain@4
|
1366 HMM Added: TIGR02052.1 TIGR02052
|
|
estrain@4
|
1367 HMM Added: TIGR02053.1 TIGR02053
|
|
estrain@4
|
1368 ---------------------------------------------------------------------
|
|
estrain@4
|
1369 Changes included in 2019-04-29.1
|
|
estrain@4
|
1370 ---------------------------------------------------------------------
|
|
estrain@4
|
1371
|
|
estrain@4
|
1372 Summary: In addition to the usual addition of 134 new genes and alleles
|
|
estrain@4
|
1373 community feedback led to the renaming of a few dfr genes. The family
|
|
estrain@4
|
1374 heirarchy file (fam.tab) was cleaned up by removing a number of superfluous
|
|
estrain@4
|
1375 entries.
|
|
estrain@4
|
1376
|
|
estrain@4
|
1377 Changes included in 2019-04-29.1
|
|
estrain@4
|
1378 - Protein changes:
|
|
estrain@4
|
1379 Prev. Release: 4810
|
|
estrain@4
|
1380 This Release: 4942
|
|
estrain@4
|
1381 Removed: 1
|
|
estrain@4
|
1382 Added: 134
|
|
estrain@4
|
1383 Modified: 3
|
|
estrain@4
|
1384 Protein Removed: WP_109545040.1 chrB
|
|
estrain@4
|
1385 Protein Added: WP_000054744.1 satA_Ba
|
|
estrain@4
|
1386 Protein Added: WP_001211209.1 blaADC-140
|
|
estrain@4
|
1387 Protein Added: WP_001211210.1 blaADC-185
|
|
estrain@4
|
1388 Protein Added: WP_001211214.1 blaADC-144
|
|
estrain@4
|
1389 Protein Added: WP_001211215.1 blaADC-115
|
|
estrain@4
|
1390 Protein Added: WP_001572373.1 mcr-9.1
|
|
estrain@4
|
1391 Protein Added: WP_002126587.1 blaADC-120
|
|
estrain@4
|
1392 Protein Added: WP_002157727.1 blaADC-117
|
|
estrain@4
|
1393 Protein Added: WP_003112187.1 blaADC-191
|
|
estrain@4
|
1394 Protein Added: WP_003242546.1 satA_Bs
|
|
estrain@4
|
1395 Protein Added: WP_004643536.1 blaADC-128
|
|
estrain@4
|
1396 Protein Added: WP_004700205.1 blaADC-133
|
|
estrain@4
|
1397 Protein Added: WP_004707701.1 blaADC-131
|
|
estrain@4
|
1398 Protein Added: WP_004712857.1 blaADC-119
|
|
estrain@4
|
1399 Protein Added: WP_004790939.1 blaADC-135
|
|
estrain@4
|
1400 Protein Added: WP_004840559.1 blaADC-123
|
|
estrain@4
|
1401 Protein Added: WP_004886093.1 blaADC-130
|
|
estrain@4
|
1402 Protein Added: WP_005039111.1 blaADC-129
|
|
estrain@4
|
1403 Protein Added: WP_005046018.1 blaADC-127
|
|
estrain@4
|
1404 Protein Added: WP_005068074.1 blaADC-132
|
|
estrain@4
|
1405 Protein Added: WP_005109685.1 blaADC-121
|
|
estrain@4
|
1406 Protein Added: WP_005123276.1 blaADC-122
|
|
estrain@4
|
1407 Protein Added: WP_005131186.1 blaADC-125
|
|
estrain@4
|
1408 Protein Added: WP_005307218.1 blaADC-134
|
|
estrain@4
|
1409 Protein Added: WP_005404206.1 blaOXA-813
|
|
estrain@4
|
1410 Protein Added: WP_005405613.1 blaOXA-814
|
|
estrain@4
|
1411 Protein Added: WP_013197184.1 blaADC-193
|
|
estrain@4
|
1412 Protein Added: WP_014207272.1 blaADC-149
|
|
estrain@4
|
1413 Protein Added: WP_016137488.1 blaADC-136
|
|
estrain@4
|
1414 Protein Added: WP_016140427.1 blaADC-137
|
|
estrain@4
|
1415 Protein Added: WP_016146025.1 blaADC-138
|
|
estrain@4
|
1416 Protein Added: WP_017386568.1 blaADC-150
|
|
estrain@4
|
1417 Protein Added: WP_017778762.1 mcr-3.27
|
|
estrain@4
|
1418 Protein Added: WP_017816757.1 blaADC-116
|
|
estrain@4
|
1419 Protein Added: WP_026382828.1 blaOXA-114i
|
|
estrain@4
|
1420 Protein Added: WP_026444036.1 blaOXA-816
|
|
estrain@4
|
1421 Protein Added: WP_032039838.1 blaADC-139
|
|
estrain@4
|
1422 Protein Added: WP_032053762.1 blaOXA-819
|
|
estrain@4
|
1423 Protein Added: WP_032057042.1 blaOXA-820
|
|
estrain@4
|
1424 Protein Added: WP_032062810.1 blaADC-141
|
|
estrain@4
|
1425 Protein Added: WP_032625176.1 blaACT-66
|
|
estrain@4
|
1426 Protein Added: WP_033502167.1 blaADC-143
|
|
estrain@4
|
1427 Protein Added: WP_034670108.1 blaOXA-818
|
|
estrain@4
|
1428 Protein Added: WP_034688190.1 blaOXA-812
|
|
estrain@4
|
1429 Protein Added: WP_036299413.1 sulR
|
|
estrain@4
|
1430 Protein Added: WP_039246976.1 blaADC-148
|
|
estrain@4
|
1431 Protein Added: WP_039258389.1 blaADC-146
|
|
estrain@4
|
1432 Protein Added: WP_039270258.1 blaADC-145
|
|
estrain@4
|
1433 Protein Added: WP_044718369.1 blaADC-147
|
|
estrain@4
|
1434 Protein Added: WP_047726486.1 blaACT-65
|
|
estrain@4
|
1435 Protein Added: WP_053498400.1 blaOXA-114h
|
|
estrain@4
|
1436 Protein Added: WP_054437016.1 blaOXA-114j
|
|
estrain@4
|
1437 Protein Added: WP_054471662.1 blaOXA-114m
|
|
estrain@4
|
1438 Protein Added: WP_054500785.1 blaOXA-789
|
|
estrain@4
|
1439 Protein Added: WP_054517040.1 blaOXA-114l
|
|
estrain@4
|
1440 Protein Added: WP_057061999.1 blaOXA-821
|
|
estrain@4
|
1441 Protein Added: WP_059247009.1 blaADC-184
|
|
estrain@4
|
1442 Protein Added: WP_063099318.1 blaADC-151
|
|
estrain@4
|
1443 Protein Added: WP_063147148.1 blaACT-67
|
|
estrain@4
|
1444 Protein Added: WP_072292271.1 blaADC-186
|
|
estrain@4
|
1445 Protein Added: WP_075040046.1 blaOXA-817
|
|
estrain@4
|
1446 Protein Added: WP_076412384.1 blaOXA-114p
|
|
estrain@4
|
1447 Protein Added: WP_099595307.1 dfrA35
|
|
estrain@4
|
1448 Protein Added: WP_103663397.1 sulX
|
|
estrain@4
|
1449 Protein Added: WP_106743337.1 mcr-1.18
|
|
estrain@4
|
1450 Protein Added: WP_109545052.1 mcr-1.14
|
|
estrain@4
|
1451 Protein Added: WP_110612827.1 blaOXA-796
|
|
estrain@4
|
1452 Protein Added: WP_111280830.1 blaOXA-815
|
|
estrain@4
|
1453 Protein Added: WP_115470049.1 blaKPC-40
|
|
estrain@4
|
1454 Protein Added: WP_117664257.1 cfxA6
|
|
estrain@4
|
1455 Protein Added: WP_125052776.1 blaADC-114
|
|
estrain@4
|
1456 Protein Added: WP_136512051.1 blaACT-68
|
|
estrain@4
|
1457 Protein Added: WP_136512052.1 blaADC-109
|
|
estrain@4
|
1458 Protein Added: WP_136512053.1 blaADC-110
|
|
estrain@4
|
1459 Protein Added: WP_136512054.1 blaADC-112
|
|
estrain@4
|
1460 Protein Added: WP_136512055.1 blaADC-113
|
|
estrain@4
|
1461 Protein Added: WP_136512056.1 blaADC-187
|
|
estrain@4
|
1462 Protein Added: WP_136512057.1 blaADC-188
|
|
estrain@4
|
1463 Protein Added: WP_136512058.1 blaADC-189
|
|
estrain@4
|
1464 Protein Added: WP_136512059.1 blaADC-190
|
|
estrain@4
|
1465 Protein Added: WP_136512060.1 blaADC-192
|
|
estrain@4
|
1466 Protein Added: WP_136512061.1 blaADC-24
|
|
estrain@4
|
1467 Protein Added: WP_136512062.1 blaADC-65
|
|
estrain@4
|
1468 Protein Added: WP_136512063.1 blaADC-66
|
|
estrain@4
|
1469 Protein Added: WP_136512064.1 blaCTX-M-225
|
|
estrain@4
|
1470 Protein Added: WP_136512065.1 blaCTX-M-226
|
|
estrain@4
|
1471 Protein Added: WP_136512066.1 blaFRI-7
|
|
estrain@4
|
1472 Protein Added: WP_136512067.1 blaIMI-18
|
|
estrain@4
|
1473 Protein Added: WP_136512068.1 blaIMP-39
|
|
estrain@4
|
1474 Protein Added: WP_136512069.1 blaIMP-46
|
|
estrain@4
|
1475 Protein Added: WP_136512070.1 blaKPC-42
|
|
estrain@4
|
1476 Protein Added: WP_136512071.1 blaKPC-43
|
|
estrain@4
|
1477 Protein Added: WP_136512072.1 blaNDM-28
|
|
estrain@4
|
1478 Protein Added: WP_136512073.1 blaOXA-114k
|
|
estrain@4
|
1479 Protein Added: WP_136512074.1 blaOXA-114n
|
|
estrain@4
|
1480 Protein Added: WP_136512075.1 blaOXA-114q
|
|
estrain@4
|
1481 Protein Added: WP_136512076.1 blaOXA-114r
|
|
estrain@4
|
1482 Protein Added: WP_136512077.1 blaOXA-114s
|
|
estrain@4
|
1483 Protein Added: WP_136512078.1 blaOXA-114t
|
|
estrain@4
|
1484 Protein Added: WP_136512079.1 blaOXA-114u
|
|
estrain@4
|
1485 Protein Added: WP_136512080.1 blaOXA-114v
|
|
estrain@4
|
1486 Protein Added: WP_136512081.1 blaOXA-114w
|
|
estrain@4
|
1487 Protein Added: WP_136512082.1 blaOXA-114x
|
|
estrain@4
|
1488 Protein Added: WP_136512083.1 blaOXA-787
|
|
estrain@4
|
1489 Protein Added: WP_136512084.1 blaOXA-788
|
|
estrain@4
|
1490 Protein Added: WP_136512085.1 blaOXA-793
|
|
estrain@4
|
1491 Protein Added: WP_136512086.1 blaOXA-794
|
|
estrain@4
|
1492 Protein Added: WP_136512087.1 blaOXA-795
|
|
estrain@4
|
1493 Protein Added: WP_136512088.1 blaOXA-797
|
|
estrain@4
|
1494 Protein Added: WP_136512089.1 blaOXA-798
|
|
estrain@4
|
1495 Protein Added: WP_136512090.1 blaOXA-799
|
|
estrain@4
|
1496 Protein Added: WP_136512091.1 blaOXA-800
|
|
estrain@4
|
1497 Protein Added: WP_136512092.1 blaOXA-801
|
|
estrain@4
|
1498 Protein Added: WP_136512093.1 blaOXA-802
|
|
estrain@4
|
1499 Protein Added: WP_136512094.1 blaOXA-803
|
|
estrain@4
|
1500 Protein Added: WP_136512095.1 blaOXA-804
|
|
estrain@4
|
1501 Protein Added: WP_136512096.1 blaOXA-805
|
|
estrain@4
|
1502 Protein Added: WP_136512097.1 blaOXA-806
|
|
estrain@4
|
1503 Protein Added: WP_136512098.1 blaOXA-807
|
|
estrain@4
|
1504 Protein Added: WP_136512099.1 blaOXA-808
|
|
estrain@4
|
1505 Protein Added: WP_136512100.1 blaOXA-809
|
|
estrain@4
|
1506 Protein Added: WP_136512101.1 blaOXA-810
|
|
estrain@4
|
1507 Protein Added: WP_136512102.1 blaOXA-811
|
|
estrain@4
|
1508 Protein Added: WP_136512103.1 blaOXA-823
|
|
estrain@4
|
1509 Protein Added: WP_136512104.1 blaOXA-824
|
|
estrain@4
|
1510 Protein Added: WP_136512105.1 blaPER-13
|
|
estrain@4
|
1511 Protein Added: WP_136512106.1 blaVIM-48
|
|
estrain@4
|
1512 Protein Added: WP_136512107.1 blaVIM-55
|
|
estrain@4
|
1513 Protein Added: WP_136512108.1 blaVIM-63
|
|
estrain@4
|
1514 Protein Added: WP_136512109.1 blaVIM-66
|
|
estrain@4
|
1515 Protein Added: WP_136512110.1 mcr-1.16
|
|
estrain@4
|
1516 Protein Added: WP_136512111.1 mcr-1.17
|
|
estrain@4
|
1517 Protein Added: WP_136512112.1 mcr-3.29
|
|
estrain@4
|
1518 Protein Modified: WP_001031075.1 dfr18 updated to WP_001031075.1 dfrA18
|
|
estrain@4
|
1519 Protein Modified: WP_032490189.1 dfrA18 updated to WP_032490189.1 dfrA19
|
|
estrain@4
|
1520 Protein Modified: WP_063843245.1 chrB updated to WP_063843245.1 chrB_rRNA_meth
|
|
estrain@4
|
1521 - AMR HMM library Changes:
|
|
estrain@4
|
1522 Prev. Release: 571
|
|
estrain@4
|
1523 This Release: 574
|
|
estrain@4
|
1524 Removed: 0
|
|
estrain@4
|
1525 Added: 3
|
|
estrain@4
|
1526 Changed: 571
|
|
estrain@4
|
1527 HMM Added: NF033818.0 blaOXA-114_like
|
|
estrain@4
|
1528 HMM Added: NF033836.1 polymyxin_MCR9
|
|
estrain@4
|
1529 HMM Added: NF033851.1 trim_DfrA35
|
|
estrain@4
|
1530 HMM Modified: NF000039.1 trim_Dfr18 renamed to NF000039.1 trim_DfrA18
|
|
estrain@4
|
1531 HMM Modified: NF000041.1 trim_DfrA18_A19 renamed to NF000041.1 trim_DfrA19
|
|
estrain@4
|
1532 HMM Modified: NF000422.2 blaPDC updated to NF000422.6 blaPDC
|
|
estrain@4
|
1533 - Protein family changes:
|
|
estrain@4
|
1534 Prev. Release: 1177
|
|
estrain@4
|
1535 This Release: 1119
|
|
estrain@4
|
1536 Removed: 68
|
|
estrain@4
|
1537 Added: 10
|
|
estrain@4
|
1538 Modified: 4
|
|
estrain@4
|
1539 Family Removed: - PORIN
|
|
estrain@4
|
1540 Family Removed: - aac(1)
|
|
estrain@4
|
1541 Family Removed: - aac(3')-IIe
|
|
estrain@4
|
1542 Family Removed: - aac(3)-Ie
|
|
estrain@4
|
1543 Family Removed: - aac(3)-VI
|
|
estrain@4
|
1544 Family Removed: - aac(3)-Vb
|
|
estrain@4
|
1545 Family Removed: - aac(6')-Ib8
|
|
estrain@4
|
1546 Family Removed: - aacA44
|
|
estrain@4
|
1547 Family Removed: - aadA1bt
|
|
estrain@4
|
1548 Family Removed: - aadA1r
|
|
estrain@4
|
1549 Family Removed: - aadA24
|
|
estrain@4
|
1550 Family Removed: - ampC_Eae
|
|
estrain@4
|
1551 Family Removed: - ampH
|
|
estrain@4
|
1552 Family Removed: - ampS
|
|
estrain@4
|
1553 Family Removed: - ant(3'')(9)
|
|
estrain@4
|
1554 Family Removed: - ant(3'')-Ii
|
|
estrain@4
|
1555 Family Removed: - aph(3')-Ic
|
|
estrain@4
|
1556 Family Removed: - arr-Cb
|
|
estrain@4
|
1557 Family Removed: - blaCMG
|
|
estrain@4
|
1558 Family Removed: - blaKLUG
|
|
estrain@4
|
1559 Family Removed: - blaLMB
|
|
estrain@4
|
1560 Family Removed: - blaMSI-OXA
|
|
estrain@4
|
1561 Family Removed: - blaOXA_missing
|
|
estrain@4
|
1562 Family Removed: - blaPNGM
|
|
estrain@4
|
1563 Family Removed: - blaZEG
|
|
estrain@4
|
1564 Family Removed: - blmS
|
|
estrain@4
|
1565 Family Removed: - catA12
|
|
estrain@4
|
1566 Family Removed: - ccrA
|
|
estrain@4
|
1567 Family Removed: NF000488.1 chrB
|
|
estrain@4
|
1568 Family Removed: - cml
|
|
estrain@4
|
1569 Family Removed: - cmlA7
|
|
estrain@4
|
1570 Family Removed: - cmlA9
|
|
estrain@4
|
1571 Family Removed: NF000039.1 dfr18
|
|
estrain@4
|
1572 Family Removed: NF000041.1 dfrA18_dfrA19
|
|
estrain@4
|
1573 Family Removed: - dfrA1_var
|
|
estrain@4
|
1574 Family Removed: - dfrA29
|
|
estrain@4
|
1575 Family Removed: - dfrA33
|
|
estrain@4
|
1576 Family Removed: - dfrB7
|
|
estrain@4
|
1577 Family Removed: - flo
|
|
estrain@4
|
1578 Family Removed: - mef(E)
|
|
estrain@4
|
1579 Family Removed: - mef(G)
|
|
estrain@4
|
1580 Family Removed: - mef(I)
|
|
estrain@4
|
1581 Family Removed: - mph(D)
|
|
estrain@4
|
1582 Family Removed: - nimF
|
|
estrain@4
|
1583 Family Removed: - nimH
|
|
estrain@4
|
1584 Family Removed: - omp35
|
|
estrain@4
|
1585 Family Removed: - ompE35
|
|
estrain@4
|
1586 Family Removed: - otr(C)
|
|
estrain@4
|
1587 Family Removed: - penA
|
|
estrain@4
|
1588 Family Removed: - sat2A
|
|
estrain@4
|
1589 Family Removed: - sat3A
|
|
estrain@4
|
1590 Family Removed: - spc
|
|
estrain@4
|
1591 Family Removed: - sul1delta
|
|
estrain@4
|
1592 Family Removed: - vanH-Ac2
|
|
estrain@4
|
1593 Family Removed: - vanH-F
|
|
estrain@4
|
1594 Family Removed: - vanR-Pt
|
|
estrain@4
|
1595 Family Removed: - vanR-Pt2
|
|
estrain@4
|
1596 Family Removed: - vanS-I
|
|
estrain@4
|
1597 Family Removed: - vanSc
|
|
estrain@4
|
1598 Family Removed: - vanTc4
|
|
estrain@4
|
1599 Family Removed: - vanX-Ac2
|
|
estrain@4
|
1600 Family Removed: - vanX-F
|
|
estrain@4
|
1601 Family Removed: - vanX-Pt2
|
|
estrain@4
|
1602 Family Removed: - vanY-40021673
|
|
estrain@4
|
1603 Family Removed: - vanY-D4
|
|
estrain@4
|
1604 Family Removed: - vanY-D5
|
|
estrain@4
|
1605 Family Removed: - vanY-M
|
|
estrain@4
|
1606 Family Removed: - vanY-Pt2
|
|
estrain@4
|
1607 Family Added: NF033818.0 blaOXA-114_like
|
|
estrain@4
|
1608 Family Added: NF033851.1 dfrA35
|
|
estrain@4
|
1609 Family Added: NF033124.1 estX
|
|
estrain@4
|
1610 Family Added: NF033836.1 mcr-9
|
|
estrain@4
|
1611 Family Added: - satA_Bs
|
|
estrain@4
|
1612 Family Added: - sulR
|
|
estrain@4
|
1613 Family Added: - sulX
|
|
estrain@4
|
1614 Family Changed: NF000422.2 blaPDC updated to NF000422.6 blaPDC
|
|
estrain@4
|
1615 Family Changed: NF000488.1 chrB renamed to chrB_rRNA_meth
|
|
estrain@4
|
1616 Family Changed: NF000039.1 dfr18 renamed to dfrA18
|
|
estrain@4
|
1617 Family Changed: NF000041.1 dfrA18_dfrA19 renamed to dfrA19
|
|
estrain@4
|
1618 ---------------------------------------------------------------------
|
|
estrain@4
|
1619 Changes included in 2019-02-08.1
|
|
estrain@4
|
1620 ---------------------------------------------------------------------
|
|
estrain@4
|
1621
|
|
estrain@4
|
1622 Two incorrectly assigned proteins were accidentally released. They are not
|
|
estrain@4
|
1623 AMR proteins and should not have been released. This release simply removes
|
|
estrain@4
|
1624 them and is otherwise unchanged.
|
|
estrain@4
|
1625
|
|
estrain@4
|
1626 - Protein changes:
|
|
estrain@4
|
1627 Prev. Release: 4812
|
|
estrain@4
|
1628 This Release: 4810
|
|
estrain@4
|
1629 Removed: 2
|
|
estrain@4
|
1630 Added: 0
|
|
estrain@4
|
1631 Changed: 4810
|
|
estrain@4
|
1632 Protein Removed: WP_000122253.1 sat
|
|
estrain@4
|
1633 Protein Removed: WP_001045652.1 sat
|
|
estrain@4
|
1634 ---------------------------------------------------------------------
|
|
estrain@4
|
1635 Changes included in 2019-02-04.1
|
|
estrain@4
|
1636 ---------------------------------------------------------------------
|
|
estrain@4
|
1637 - Protein name changes:
|
|
estrain@4
|
1638 "inhibitor-resistant" was added to the names of:
|
|
estrain@4
|
1639 blaKPC-8
|
|
estrain@4
|
1640 blaKPC-30
|
|
estrain@4
|
1641 blaKPC-31
|
|
estrain@4
|
1642 blaKPC-32
|
|
estrain@4
|
1643 blaKPC-33
|
|
estrain@4
|
1644 - Protein changes:
|
|
estrain@4
|
1645 Prev. Release: 4730
|
|
estrain@4
|
1646 This Release: 4812
|
|
estrain@4
|
1647 Removed: 0
|
|
estrain@4
|
1648 Added: 82
|
|
estrain@4
|
1649 Protein modified: WP_063855700.1 tet(35) replaced with WP_005480402.1
|
|
estrain@4
|
1650 Protein Added: WP_000122253.1 sat
|
|
estrain@4
|
1651 Protein Added: WP_001045652.1 sat
|
|
estrain@4
|
1652 Protein Added: WP_002415638.1 poxtA
|
|
estrain@4
|
1653 Protein Added: WP_003234144.1 vmlR
|
|
estrain@4
|
1654 Protein Added: WP_029728367.1 blaB
|
|
estrain@4
|
1655 Protein Added: WP_044103626.1 blaVEB-21
|
|
estrain@4
|
1656 Protein Added: WP_046693238.1 blaADC-181
|
|
estrain@4
|
1657 Protein Added: WP_049637206.1 blaOXA-780
|
|
estrain@4
|
1658 Protein Added: WP_057691114.1 blaADC-182
|
|
estrain@4
|
1659 Protein Added: WP_058492019.1 vanI
|
|
estrain@4
|
1660 Protein Added: WP_065980086.1 blaOXA-784
|
|
estrain@4
|
1661 Protein Added: WP_069953510.1 blaAFM-1
|
|
estrain@4
|
1662 Protein Added: WP_069996660.1 mecC3
|
|
estrain@4
|
1663 Protein Added: WP_071223118.1 taeA
|
|
estrain@4
|
1664 Protein Added: WP_087343787.1 ant(6)-Ic
|
|
estrain@4
|
1665 Protein Added: WP_087344360.1 blaBBI
|
|
estrain@4
|
1666 Protein Added: WP_087344902.1 catV
|
|
estrain@4
|
1667 Protein Added: WP_087346196.1 ant(4')-Ic
|
|
estrain@4
|
1668 Protein Added: WP_087347987.1 rphC
|
|
estrain@4
|
1669 Protein Added: WP_087348261.1 rphD
|
|
estrain@4
|
1670 Protein Added: WP_087349244.1 mphJ
|
|
estrain@4
|
1671 Protein Added: WP_087349651.1 aac(6')-35
|
|
estrain@4
|
1672 Protein Added: WP_114225343.1 blaOXA-739
|
|
estrain@4
|
1673 Protein Added: WP_123002100.1 blaGES-40
|
|
estrain@4
|
1674 Protein Added: WP_123002101.1 blaKPC-38
|
|
estrain@4
|
1675 Protein Added: WP_123002102.1 blaNDM-27
|
|
estrain@4
|
1676 Protein Added: WP_123002103.1 blaVIM-61
|
|
estrain@4
|
1677 Protein Added: WP_126205827.1 blaOXA-785
|
|
estrain@4
|
1678 Protein Added: WP_127728991.1 blaFRI-6
|
|
estrain@4
|
1679 Protein Added: WP_128268231.1 mecC2
|
|
estrain@4
|
1680 Protein Added: WP_128268232.1 blaADC-183
|
|
estrain@4
|
1681 Protein Added: WP_128268233.1 blaCARB-50
|
|
estrain@4
|
1682 Protein Added: WP_128268234.1 blaCFE-2
|
|
estrain@4
|
1683 Protein Added: WP_128268235.1 blaCTX-M-215
|
|
estrain@4
|
1684 Protein Added: WP_128268236.1 blaDHA-28
|
|
estrain@4
|
1685 Protein Added: WP_128268237.1 blaKPC-39
|
|
estrain@4
|
1686 Protein Added: WP_128268238.1 blaOXA-738
|
|
estrain@4
|
1687 Protein Added: WP_128268239.1 blaOXA-740
|
|
estrain@4
|
1688 Protein Added: WP_128268240.1 blaOXA-741
|
|
estrain@4
|
1689 Protein Added: WP_128268241.1 blaOXA-742
|
|
estrain@4
|
1690 Protein Added: WP_128268242.1 blaOXA-743
|
|
estrain@4
|
1691 Protein Added: WP_128268243.1 blaOXA-744
|
|
estrain@4
|
1692 Protein Added: WP_128268244.1 blaOXA-745
|
|
estrain@4
|
1693 Protein Added: WP_128268245.1 blaOXA-746
|
|
estrain@4
|
1694 Protein Added: WP_128268246.1 blaOXA-747
|
|
estrain@4
|
1695 Protein Added: WP_128268247.1 blaOXA-748
|
|
estrain@4
|
1696 Protein Added: WP_128268248.1 blaOXA-749
|
|
estrain@4
|
1697 Protein Added: WP_128268249.1 blaOXA-750
|
|
estrain@4
|
1698 Protein Added: WP_128268250.1 blaOXA-751
|
|
estrain@4
|
1699 Protein Added: WP_128268251.1 blaOXA-752
|
|
estrain@4
|
1700 Protein Added: WP_128268252.1 blaOXA-753
|
|
estrain@4
|
1701 Protein Added: WP_128268253.1 blaOXA-754
|
|
estrain@4
|
1702 Protein Added: WP_128268254.1 blaOXA-755
|
|
estrain@4
|
1703 Protein Added: WP_128268255.1 blaOXA-756
|
|
estrain@4
|
1704 Protein Added: WP_128268256.1 blaOXA-757
|
|
estrain@4
|
1705 Protein Added: WP_128268257.1 blaOXA-758
|
|
estrain@4
|
1706 Protein Added: WP_128268258.1 blaOXA-759
|
|
estrain@4
|
1707 Protein Added: WP_128268259.1 blaOXA-760
|
|
estrain@4
|
1708 Protein Added: WP_128268260.1 blaOXA-761
|
|
estrain@4
|
1709 Protein Added: WP_128268261.1 blaOXA-762
|
|
estrain@4
|
1710 Protein Added: WP_128268262.1 blaOXA-763
|
|
estrain@4
|
1711 Protein Added: WP_128268263.1 blaOXA-764
|
|
estrain@4
|
1712 Protein Added: WP_128268264.1 blaOXA-765
|
|
estrain@4
|
1713 Protein Added: WP_128268265.1 blaOXA-766
|
|
estrain@4
|
1714 Protein Added: WP_128268266.1 blaOXA-767
|
|
estrain@4
|
1715 Protein Added: WP_128268267.1 blaOXA-768
|
|
estrain@4
|
1716 Protein Added: WP_128268268.1 blaOXA-769
|
|
estrain@4
|
1717 Protein Added: WP_128268269.1 blaOXA-770
|
|
estrain@4
|
1718 Protein Added: WP_128268270.1 blaOXA-771
|
|
estrain@4
|
1719 Protein Added: WP_128268271.1 blaOXA-772
|
|
estrain@4
|
1720 Protein Added: WP_128268272.1 blaOXA-773
|
|
estrain@4
|
1721 Protein Added: WP_128268273.1 blaOXA-774
|
|
estrain@4
|
1722 Protein Added: WP_128268274.1 blaOXA-775
|
|
estrain@4
|
1723 Protein Added: WP_128268275.1 blaOXA-776
|
|
estrain@4
|
1724 Protein Added: WP_128268276.1 blaOXA-781
|
|
estrain@4
|
1725 Protein Added: WP_128268277.1 blaOXA-782
|
|
estrain@4
|
1726 Protein Added: WP_128268278.1 blaOXA-783
|
|
estrain@4
|
1727 Protein Added: WP_128268279.1 blaOXA-786
|
|
estrain@4
|
1728 Protein Added: WP_128268280.1 blaPDC-317
|
|
estrain@4
|
1729 Protein Added: WP_128268286.1 blaVEB-20
|
|
estrain@4
|
1730 Protein Added: WP_128268287.1 blaVIM-62
|
|
estrain@4
|
1731 Protein Added: WP_128268288.1 qnrS15
|
|
estrain@4
|
1732 - AMR HMM library Changes:
|
|
estrain@4
|
1733 Prev. Release: 568
|
|
estrain@4
|
1734 This Release: 571
|
|
estrain@4
|
1735 Removed: 0
|
|
estrain@4
|
1736 Added: 3
|
|
estrain@4
|
1737 HMM Added: NF033714.1 blaBBI
|
|
estrain@4
|
1738 HMM Added: NF033736.1 blaAFM
|
|
estrain@4
|
1739 HMM Added: NF033815.0 blaOXA-364_like
|
|
estrain@4
|
1740 HMM Modified: NF000355.2 ribo_prot_ABC_F updated to NF000355.3 ribo_prot_ABC_F
|
|
estrain@4
|
1741 - Protein family changes:
|
|
estrain@4
|
1742 Prev. Release: 1161
|
|
estrain@4
|
1743 This Release: 1177
|
|
estrain@4
|
1744 Removed: 0
|
|
estrain@4
|
1745 Added: 16
|
|
estrain@4
|
1746 Family Added: - aac(6')-35
|
|
estrain@4
|
1747 Family Added: - ant(4')-Ic
|
|
estrain@4
|
1748 Family Added: - ant(6)-Ic
|
|
estrain@4
|
1749 Family Added: NF033736.1 blaAFM
|
|
estrain@4
|
1750 Family Added: NF033714.1 blaBBI
|
|
estrain@4
|
1751 Family Added: NF033815.0 blaOXA-364_like
|
|
estrain@4
|
1752 Family Added: - mecC2
|
|
estrain@4
|
1753 Family Added: - mecC3
|
|
estrain@4
|
1754 Family Added: - mphJ
|
|
estrain@4
|
1755 Family Added: - poxtA
|
|
estrain@4
|
1756 Family Added: - rphC
|
|
estrain@4
|
1757 Family Added: - rphD
|
|
estrain@4
|
1758 Family Added: - rph_gen
|
|
estrain@4
|
1759 Family Added: - satA_Ba
|
|
estrain@4
|
1760 Family Added: - taeA
|
|
estrain@4
|
1761 Family Added: - vmlR
|
|
estrain@4
|
1762 Family Changed: NF000355.2 abc-f updated to NF000355.3 abc-f
|
|
estrain@4
|
1763
|
|
estrain@4
|
1764 ---------------------------------------------------------------------
|
|
estrain@4
|
1765 Changes included in 2018-11-07.1
|
|
estrain@4
|
1766 ---------------------------------------------------------------------
|
|
estrain@4
|
1767
|
|
estrain@4
|
1768 Due to a communication error three blaOXA alleles in the AMR database have
|
|
estrain@4
|
1769 been reassigned. Alleles published by Tian, et al. (PMID:30247543) have
|
|
estrain@4
|
1770 replaced them.
|
|
estrain@4
|
1771
|
|
estrain@4
|
1772 AFY12006.1 JX846494.1 WP_072678505.1 NG_061615.1 were blaOXA-669, now they are blaOXA-732
|
|
estrain@4
|
1773 AAL47570.1 AY066004.1 WP_114699266.1 NG_061383.1 were blaOXA-666, now they are blaOXA-729
|
|
estrain@4
|
1774 AXH06203.1 MH684781.1 WP_116786836.1 NG_061623.1 were blaOXA-667, now they are blaOXA-730
|
|
estrain@4
|
1775
|
|
estrain@4
|
1776 - Protein changes:
|
|
estrain@4
|
1777 Prev. Release: 4579
|
|
estrain@4
|
1778 This Release: 4730
|
|
estrain@4
|
1779 Removed: 0
|
|
estrain@4
|
1780 Added: 151
|
|
estrain@4
|
1781 Protein Added: WP_004143591.1 blaSHV-206
|
|
estrain@4
|
1782 Protein Added: WP_004384957.1 blaCSA-2
|
|
estrain@4
|
1783 Protein Added: WP_007888761.1 blaCSA-1
|
|
estrain@4
|
1784 Protein Added: WP_011245929.1 clbB
|
|
estrain@4
|
1785 Protein Added: WP_011707905.1 blaOXA-725
|
|
estrain@4
|
1786 Protein Added: WP_012116915.1 clbA
|
|
estrain@4
|
1787 Protein Added: WP_015892743.1 clbC
|
|
estrain@4
|
1788 Protein Added: WP_016162389.1 blaOXA-673
|
|
estrain@4
|
1789 Protein Added: WP_016168805.1 blaOXA-664
|
|
estrain@4
|
1790 Protein Added: WP_016651348.1 blaOXA-670
|
|
estrain@4
|
1791 Protein Added: WP_016657654.1 blaOXA-665
|
|
estrain@4
|
1792 Protein Added: WP_016660101.1 blaOXA-671
|
|
estrain@4
|
1793 Protein Added: WP_016685888.1 blaOXA-715
|
|
estrain@4
|
1794 Protein Added: WP_017822040.1 qnrVC10
|
|
estrain@4
|
1795 Protein Added: WP_023271137.1 blaOXA-672
|
|
estrain@4
|
1796 Protein Added: WP_023341517.1 blaSHV-211
|
|
estrain@4
|
1797 Protein Added: WP_031998610.1 blaOXA-716
|
|
estrain@4
|
1798 Protein Added: WP_032018141.1 blaOXA-717
|
|
estrain@4
|
1799 Protein Added: WP_032495491.1 blaKLUC-3
|
|
estrain@4
|
1800 Protein Added: WP_032495492.1 blaKLUC-4
|
|
estrain@4
|
1801 Protein Added: WP_032974004.1 blaCMA-1
|
|
estrain@4
|
1802 Protein Added: WP_033179079.1 crpP
|
|
estrain@4
|
1803 Protein Added: WP_034612711.1 blaOXA-668
|
|
estrain@4
|
1804 Protein Added: WP_056517622.1 blaOXA-669
|
|
estrain@4
|
1805 Protein Added: WP_057097547.1 aph(2'')-If2
|
|
estrain@4
|
1806 Protein Added: WP_058652112.1 dfrA34
|
|
estrain@4
|
1807 Protein Added: WP_064733493.1 blaSHV-207
|
|
estrain@4
|
1808 Protein Added: WP_064760451.1 qepA4
|
|
estrain@4
|
1809 Protein Added: WP_064768701.1 qepA7
|
|
estrain@4
|
1810 Protein Added: WP_077096319.1 blaOXA-724
|
|
estrain@4
|
1811 Protein Added: WP_081406929.1 blaOXA-674
|
|
estrain@4
|
1812 Protein Added: WP_081853183.1 blaELM-1
|
|
estrain@4
|
1813 Protein Added: WP_092689909.1 blaOXA-666
|
|
estrain@4
|
1814 Protein Added: WP_094166899.1 blaCTX-M-224
|
|
estrain@4
|
1815 Protein Added: WP_096735335.1 blaOXA-667
|
|
estrain@4
|
1816 Protein Added: WP_096941464.1 qepA6
|
|
estrain@4
|
1817 Protein Added: WP_100663667.1 blaKLUC-5
|
|
estrain@4
|
1818 Protein Added: WP_101150415.1 blaOXA-726
|
|
estrain@4
|
1819 Protein Added: WP_104159136.1 blaSHV-224
|
|
estrain@4
|
1820 Protein Added: WP_105620838.1 blaCMA-2
|
|
estrain@4
|
1821 Protein Added: WP_109232473.1 blaSHV-220
|
|
estrain@4
|
1822 Protein Added: WP_109638756.1 qepA8
|
|
estrain@4
|
1823 Protein Added: WP_112021705.1 qepA9
|
|
estrain@4
|
1824 Protein Added: WP_113334341.1 qepA10
|
|
estrain@4
|
1825 Protein Added: WP_115196748.1 blaSHV-210
|
|
estrain@4
|
1826 Protein Added: WP_117241614.1 blaSHV-223
|
|
estrain@4
|
1827 Protein Added: WP_122630822.1 blaEFM-1
|
|
estrain@4
|
1828 Protein Added: WP_122630823.1 blaEVM-1
|
|
estrain@4
|
1829 Protein Added: WP_122630824.1 blaECM-1
|
|
estrain@4
|
1830 Protein Added: WP_122630825.1 blaEAM-1
|
|
estrain@4
|
1831 Protein Added: WP_122630826.1 blaGES-38
|
|
estrain@4
|
1832 Protein Added: WP_122630827.1 blaGES-39
|
|
estrain@4
|
1833 Protein Added: WP_122630828.1 blaVIM-53
|
|
estrain@4
|
1834 Protein Added: WP_122630829.1 blaDHT2-1
|
|
estrain@4
|
1835 Protein Added: WP_122630830.1 blaSPN79-1
|
|
estrain@4
|
1836 Protein Added: WP_122630831.1 blaCRD3-1
|
|
estrain@4
|
1837 Protein Added: WP_122630832.1 blaALG6-1
|
|
estrain@4
|
1838 Protein Added: WP_122630833.1 blaALG11-1
|
|
estrain@4
|
1839 Protein Added: WP_122630834.1 blaGRD33-1
|
|
estrain@4
|
1840 Protein Added: WP_122630835.1 blaGRD23-1
|
|
estrain@4
|
1841 Protein Added: WP_122630836.1 blaCMY-158
|
|
estrain@4
|
1842 Protein Added: WP_122630837.1 blaCMY-159
|
|
estrain@4
|
1843 Protein Added: WP_122630838.1 blaSHV-201
|
|
estrain@4
|
1844 Protein Added: WP_122630839.1 blaSHV-202
|
|
estrain@4
|
1845 Protein Added: WP_122630840.1 aph(2'')
|
|
estrain@4
|
1846 Protein Added: WP_122630841.1 blaTEM-237
|
|
estrain@4
|
1847 Protein Added: WP_122630842.1 blaOXA-655
|
|
estrain@4
|
1848 Protein Added: WP_122630843.1 blaOXA-656
|
|
estrain@4
|
1849 Protein Added: WP_122630844.1 blaOXA-733
|
|
estrain@4
|
1850 Protein Added: WP_122630845.1 blaPDC-307
|
|
estrain@4
|
1851 Protein Added: WP_122630846.1 blaPDC-308
|
|
estrain@4
|
1852 Protein Added: WP_122630847.1 blaPDC-309
|
|
estrain@4
|
1853 Protein Added: WP_122630848.1 blaPDC-310
|
|
estrain@4
|
1854 Protein Added: WP_122630849.1 blaPDC-311
|
|
estrain@4
|
1855 Protein Added: WP_122630850.1 blaPDC-312
|
|
estrain@4
|
1856 Protein Added: WP_122630851.1 blaPDC-313
|
|
estrain@4
|
1857 Protein Added: WP_122630852.1 blaPDC-314
|
|
estrain@4
|
1858 Protein Added: WP_122630853.1 blaOXA-734
|
|
estrain@4
|
1859 Protein Added: WP_122630854.1 blaOXA-735
|
|
estrain@4
|
1860 Protein Added: WP_122630855.1 blaOXA-736
|
|
estrain@4
|
1861 Protein Added: WP_122630856.1 blaOXA-737
|
|
estrain@4
|
1862 Protein Added: WP_122630857.1 blaOXA-675
|
|
estrain@4
|
1863 Protein Added: WP_122630858.1 blaOXA-676
|
|
estrain@4
|
1864 Protein Added: WP_122630859.1 blaOXA-677
|
|
estrain@4
|
1865 Protein Added: WP_122630860.1 blaOXA-678
|
|
estrain@4
|
1866 Protein Added: WP_122630861.1 blaIMP-80
|
|
estrain@4
|
1867 Protein Added: WP_122630862.1 blaCTX-M-223
|
|
estrain@4
|
1868 Protein Added: WP_122630863.1 blaSHV-205
|
|
estrain@4
|
1869 Protein Added: WP_122630864.1 blaOXA-680
|
|
estrain@4
|
1870 Protein Added: WP_122630865.1 blaSHV-208
|
|
estrain@4
|
1871 Protein Added: WP_122630866.1 blaSHV-209
|
|
estrain@4
|
1872 Protein Added: WP_122630867.1 blaSHV-212
|
|
estrain@4
|
1873 Protein Added: WP_122630868.1 blaSHV-213
|
|
estrain@4
|
1874 Protein Added: WP_122630869.1 blaSHV-214
|
|
estrain@4
|
1875 Protein Added: WP_122630870.1 blaSHV-215
|
|
estrain@4
|
1876 Protein Added: WP_122630871.1 blaSHV-216
|
|
estrain@4
|
1877 Protein Added: WP_122630872.1 blaSHV-217
|
|
estrain@4
|
1878 Protein Added: WP_122630873.1 blaSHV-218
|
|
estrain@4
|
1879 Protein Added: WP_122630874.1 blaSHV-219
|
|
estrain@4
|
1880 Protein Added: WP_122630875.1 blaSHV-221
|
|
estrain@4
|
1881 Protein Added: WP_122630876.1 blaSHV-222
|
|
estrain@4
|
1882 Protein Added: WP_122630877.1 blaSHV-225
|
|
estrain@4
|
1883 Protein Added: WP_122630878.1 blaSHV-226
|
|
estrain@4
|
1884 Protein Added: WP_122630879.1 blaSHV-227
|
|
estrain@4
|
1885 Protein Added: WP_122630880.1 blaSHV-228
|
|
estrain@4
|
1886 Protein Added: WP_122630881.1 blaOXA-681
|
|
estrain@4
|
1887 Protein Added: WP_122630882.1 blaPDC-315
|
|
estrain@4
|
1888 Protein Added: WP_122630883.1 blaPDC-316
|
|
estrain@4
|
1889 Protein Added: WP_122630884.1 blaOXA-682
|
|
estrain@4
|
1890 Protein Added: WP_122630885.1 blaOXA-683
|
|
estrain@4
|
1891 Protein Added: WP_122630886.1 blaOXA-684
|
|
estrain@4
|
1892 Protein Added: WP_122630887.1 blaOXA-685
|
|
estrain@4
|
1893 Protein Added: WP_122630888.1 blaOXA-686
|
|
estrain@4
|
1894 Protein Added: WP_122630889.1 blaOXA-687
|
|
estrain@4
|
1895 Protein Added: WP_122630890.1 blaOXA-688
|
|
estrain@4
|
1896 Protein Added: WP_122630891.1 blaOXA-689
|
|
estrain@4
|
1897 Protein Added: WP_122630892.1 blaOXA-690
|
|
estrain@4
|
1898 Protein Added: WP_122630893.1 blaOXA-691
|
|
estrain@4
|
1899 Protein Added: WP_122630894.1 blaOXA-692
|
|
estrain@4
|
1900 Protein Added: WP_122630895.1 blaOXA-693
|
|
estrain@4
|
1901 Protein Added: WP_122630896.1 blaOXA-694
|
|
estrain@4
|
1902 Protein Added: WP_122630897.1 blaOXA-695
|
|
estrain@4
|
1903 Protein Added: WP_122630898.1 blaOXA-696
|
|
estrain@4
|
1904 Protein Added: WP_122630899.1 blaOXA-697
|
|
estrain@4
|
1905 Protein Added: WP_122630900.1 blaOXA-698
|
|
estrain@4
|
1906 Protein Added: WP_122630901.1 blaOXA-699
|
|
estrain@4
|
1907 Protein Added: WP_122630902.1 blaOXA-700
|
|
estrain@4
|
1908 Protein Added: WP_122630903.1 blaOXA-701
|
|
estrain@4
|
1909 Protein Added: WP_122630904.1 blaOXA-702
|
|
estrain@4
|
1910 Protein Added: WP_122630905.1 blaOXA-703
|
|
estrain@4
|
1911 Protein Added: WP_122630906.1 blaOXA-704
|
|
estrain@4
|
1912 Protein Added: WP_122630907.1 blaOXA-705
|
|
estrain@4
|
1913 Protein Added: WP_122630908.1 blaOXA-706
|
|
estrain@4
|
1914 Protein Added: WP_122630909.1 blaOXA-707
|
|
estrain@4
|
1915 Protein Added: WP_122630910.1 blaOXA-718
|
|
estrain@4
|
1916 Protein Added: WP_122630911.1 blaOXA-719
|
|
estrain@4
|
1917 Protein Added: WP_122630912.1 blaOXA-720
|
|
estrain@4
|
1918 Protein Added: WP_122630913.1 blaOXA-721
|
|
estrain@4
|
1919 Protein Added: WP_122630914.1 blaOXA-722
|
|
estrain@4
|
1920 Protein Added: WP_122630915.1 blaOXA-723
|
|
estrain@4
|
1921 Protein Added: WP_122630916.1 blaOXA-708
|
|
estrain@4
|
1922 Protein Added: WP_122630917.1 blaOXA-709
|
|
estrain@4
|
1923 Protein Added: WP_122630918.1 blaOXA-710
|
|
estrain@4
|
1924 Protein Added: WP_122630919.1 blaOXA-711
|
|
estrain@4
|
1925 Protein Added: WP_122630920.1 blaOXA-712
|
|
estrain@4
|
1926 Protein Added: WP_122630921.1 blaOXA-713
|
|
estrain@4
|
1927 Protein Added: WP_122630922.1 blaOXA-714
|
|
estrain@4
|
1928 Protein Added: WP_122630923.1 blaOXA-777
|
|
estrain@4
|
1929 Protein Added: WP_122630924.1 blaOXA-778
|
|
estrain@4
|
1930 Protein Added: WP_122634438.1 blaOXA-779
|
|
estrain@4
|
1931 Protein Added: WP_122634439.1 blaOXA-679
|
|
estrain@4
|
1932 Gene Symbol Modified: WP_010890145.1 qacE_gen updated to WP_010890145.1 qacE
|
|
estrain@4
|
1933 Gene Symbol Modified: WP_053515552.1 qacE_gen updated to WP_053515552.1 qacE
|
|
estrain@4
|
1934 Gene Symbol Modified: WP_063844281.1 cphA updated to WP_063844281.1 cphA3
|
|
estrain@4
|
1935 Gene Symbol Modified: WP_063854778.1 qepA updated to WP_063854778.1 qepA5
|
|
estrain@4
|
1936 Gene Symbol Modified: WP_072678505.1 blaOXA-669 updated to WP_072678505.1 blaOXA-732
|
|
estrain@4
|
1937 Gene Symbol Modified: WP_114699266.1 blaOXA-666 updated to WP_114699266.1 blaOXA-729
|
|
estrain@4
|
1938 Gene Symbol Modified: WP_116786836.1 blaOXA-667 updated to WP_116786836.1 blaOXA-730
|
|
estrain@4
|
1939 - AMR HMM library Changes:
|
|
estrain@4
|
1940 Prev. Release: 563
|
|
estrain@4
|
1941 This Release: 568
|
|
estrain@4
|
1942 Removed: 0
|
|
estrain@4
|
1943 Added: 5
|
|
estrain@4
|
1944 HMM Added: NF033692.1 APH_2pp_I_a_f_h
|
|
estrain@4
|
1945 HMM Added: NF033693.0 AAC_6p_Ie_fam
|
|
estrain@4
|
1946 HMM Added: NF033698.1 blaCSA
|
|
estrain@4
|
1947 HMM Added: NF033700.1 blaCMA
|
|
estrain@4
|
1948 HMM Added: NF033702.0 blaOXA-12_like
|
|
estrain@4
|
1949 HMM Name Modified: NF033666.1 blaOXA-664_like updated to NF033666.1 blaOXA-727_like
|
|
estrain@4
|
1950 - Protein family changes:
|
|
estrain@4
|
1951 Prev. Release: 1133
|
|
estrain@4
|
1952 This Release: 1161
|
|
estrain@4
|
1953 Removed: 0
|
|
estrain@4
|
1954 Added: 28
|
|
estrain@4
|
1955 Family Added: - aac(6')-Ie2
|
|
estrain@4
|
1956 Family Added: NF033693.0 aac(6')-Ie_fam
|
|
estrain@4
|
1957 Family Added: NF011706.2 acrB
|
|
estrain@4
|
1958 Family Added: NF007842.1 acrD
|
|
estrain@4
|
1959 Family Added: NF000314.1 adeB/adeJ
|
|
estrain@4
|
1960 Family Added: NF033692.1 aph(2'')-I_a_f_h
|
|
estrain@4
|
1961 Family Added: - aph(2'')-If2
|
|
estrain@4
|
1962 Family Added: - blaALG11
|
|
estrain@4
|
1963 Family Added: - blaALG6
|
|
estrain@4
|
1964 Family Added: NF033700.1 blaCMA
|
|
estrain@4
|
1965 Family Added: - blaCRD3
|
|
estrain@4
|
1966 Family Added: NF033698.1 blaCSA
|
|
estrain@4
|
1967 Family Added: - blaCrA
|
|
estrain@4
|
1968 Family Added: - blaDHT2
|
|
estrain@4
|
1969 Family Added: - blaEAM
|
|
estrain@4
|
1970 Family Added: - blaECM
|
|
estrain@4
|
1971 Family Added: - blaEFM
|
|
estrain@4
|
1972 Family Added: - blaELM
|
|
estrain@4
|
1973 Family Added: - blaEVM
|
|
estrain@4
|
1974 Family Added: - blaGRD23
|
|
estrain@4
|
1975 Family Added: - blaGRD33
|
|
estrain@4
|
1976 Family Added: NF033702.0 blaOXA-12_like
|
|
estrain@4
|
1977 Family Added: - blaPNGM
|
|
estrain@4
|
1978 Family Added: - blaSPN79
|
|
estrain@4
|
1979 Family Added: - catV
|
|
estrain@4
|
1980 Family Added: - crpP
|
|
estrain@4
|
1981 Family Added: - dfrA34
|
|
estrain@4
|
1982 Family Added: - qacE
|
|
estrain@4
|
1983 Family Renamed: NF033666.1 blaOXA-664_like became blaOXA-727_like
|
|
estrain@4
|
1984
|
|
estrain@4
|
1985 ---------------------------------------------------------------------
|
|
estrain@4
|
1986 Changes included in 2018-09-14.1
|
|
estrain@4
|
1987 ----------------------------------------------------------------------
|
|
estrain@4
|
1988 - Protein changes:
|
|
estrain@4
|
1989 Prev. Release: 4569
|
|
estrain@4
|
1990 This Release: 4579
|
|
estrain@4
|
1991 Removed: 0
|
|
estrain@4
|
1992 Added: 10
|
|
estrain@4
|
1993 Protein Added: WP_116786828.1 mcr-4.6
|
|
estrain@4
|
1994 Protein Added: WP_116786829.1 blaCTX-M-222
|
|
estrain@4
|
1995 Protein Added: WP_116786830.1 mcr-1.15
|
|
estrain@4
|
1996 Protein Added: WP_116786831.1 blaTEM-236
|
|
estrain@4
|
1997 Protein Added: WP_116786832.1 blaKPC-37
|
|
estrain@4
|
1998 Protein Added: WP_116786834.1 blaPDC-304
|
|
estrain@4
|
1999 Protein Added: WP_116786836.1 blaOXA-667
|
|
estrain@4
|
2000 Protein Added: WP_116786837.1 blaPDC-305
|
|
estrain@4
|
2001 Protein Added: WP_116786838.1 blaPDC-306
|
|
estrain@4
|
2002 Protein Added: WP_116786839.1 blaIMP-79
|
|
estrain@4
|
2003 - AMR HMM library Changes:
|
|
estrain@4
|
2004 Prev. Release: 563
|
|
estrain@4
|
2005 This Release: 563
|
|
estrain@4
|
2006 Removed: 0
|
|
estrain@4
|
2007 Added: 0
|
|
estrain@4
|
2008 - Protein family changes:
|
|
estrain@4
|
2009 Prev. Release: 1133
|
|
estrain@4
|
2010 This Release: 1133
|
|
estrain@4
|
2011 Removed: 0
|
|
estrain@4
|
2012 Added: 0
|
|
estrain@4
|
2013
|
|
estrain@4
|
2014 ---------------------------------------------------------------------
|
|
estrain@4
|
2015 Changes included in 2018-08-24.1
|
|
estrain@4
|
2016 ---------------------------------------------------------------------
|
|
estrain@4
|
2017 - Protein changes:
|
|
estrain@4
|
2018 Prev. Release: 4563
|
|
estrain@4
|
2019 This Release: 4569
|
|
estrain@4
|
2020 Removed: 1
|
|
estrain@4
|
2021 Added: 7
|
|
estrain@4
|
2022 Protein Removed: WP_063843217.1 catA1
|
|
estrain@4
|
2023 Protein Added: WP_003436401.1 vanR-Cd
|
|
estrain@4
|
2024 Protein Added: WP_009889012.1 vanZ1
|
|
estrain@4
|
2025 Protein Added: WP_011861275.1 vanS-Cd
|
|
estrain@4
|
2026 Protein Added: WP_011861276.1 vanG-Cd
|
|
estrain@4
|
2027 Protein Added: WP_020924773.1 blaAXC-1
|
|
estrain@4
|
2028 Protein Added: WP_072310976.1 mcr-8.2
|
|
estrain@4
|
2029 Protein Added: WP_072678505.1 blaOXA-669
|
|
estrain@4
|
2030 - AMR HMM library Changes:
|
|
estrain@4
|
2031 Prev. Release: 563
|
|
estrain@4
|
2032 This Release: 563
|
|
estrain@4
|
2033 Removed: 0
|
|
estrain@4
|
2034 Added: 0
|
|
estrain@4
|
2035 - Protein family changes:
|
|
estrain@4
|
2036 Prev. Release: 1128
|
|
estrain@4
|
2037 This Release: 1133
|
|
estrain@4
|
2038 Removed: 0
|
|
estrain@4
|
2039 Added: 5
|
|
estrain@4
|
2040 Family Added: - blaAXC
|
|
estrain@4
|
2041 Family Added: - vanG-Cd
|
|
estrain@4
|
2042 Family Added: - vanR-Cd
|
|
estrain@4
|
2043 Family Added: - vanS-Cd
|
|
estrain@4
|
2044 Family Added: - vanZ1
|
|
estrain@4
|
2045
|
|
estrain@4
|
2046 ---------------------------------------------------------------------
|
|
estrain@4
|
2047 Changes included in 2018-08-01.1
|
|
estrain@4
|
2048 ---------------------------------------------------------------------
|
|
estrain@4
|
2049 - Protein changes:
|
|
estrain@4
|
2050 Prev. Release: 4528
|
|
estrain@4
|
2051 This Release: 4563
|
|
estrain@4
|
2052 Removed: 0
|
|
estrain@4
|
2053 Added: 35
|
|
estrain@4
|
2054 Protein Added: WP_000622776.1 qacA
|
|
estrain@4
|
2055 Protein Added: WP_001159761.1 blaADC-176
|
|
estrain@4
|
2056 Protein Added: WP_001211208.1 blaADC-175
|
|
estrain@4
|
2057 Protein Added: WP_010730188.1 qacZ
|
|
estrain@4
|
2058 Protein Added: WP_013095270.1 blaCMH-4
|
|
estrain@4
|
2059 Protein Added: WP_032410229.1 blaOXA-663
|
|
estrain@4
|
2060 Protein Added: WP_033487869.1 blaACT-56
|
|
estrain@4
|
2061 Protein Added: WP_046887417.1 blaCMH-5
|
|
estrain@4
|
2062 Protein Added: WP_047052637.1 blaACT-55
|
|
estrain@4
|
2063 Protein Added: WP_050861789.1 blaACT-64
|
|
estrain@4
|
2064 Protein Added: WP_070210118.1 blaOXA-658
|
|
estrain@4
|
2065 Protein Added: WP_094935119.1 blaACT-57
|
|
estrain@4
|
2066 Protein Added: WP_111772163.1 blaVIM-58
|
|
estrain@4
|
2067 Protein Added: WP_111976052.1 blaACT-60
|
|
estrain@4
|
2068 Protein Added: WP_112017656.1 blaACT-61
|
|
estrain@4
|
2069 Protein Added: WP_112792421.1 blaACT-59
|
|
estrain@4
|
2070 Protein Added: WP_114699266.1 blaOXA-666
|
|
estrain@4
|
2071 Protein Added: WP_114699267.1 blaKPC-36
|
|
estrain@4
|
2072 Protein Added: WP_114699268.1 blaADC-174
|
|
estrain@4
|
2073 Protein Added: WP_114699269.1 blaADC-177
|
|
estrain@4
|
2074 Protein Added: WP_114699270.1 blaADC-178
|
|
estrain@4
|
2075 Protein Added: WP_114699271.1 blaADC-179
|
|
estrain@4
|
2076 Protein Added: WP_114699272.1 blaADC-180
|
|
estrain@4
|
2077 Protein Added: WP_114699273.1 blaOXA-661
|
|
estrain@4
|
2078 Protein Added: WP_114699274.1 blaOXA-662
|
|
estrain@4
|
2079 Protein Added: WP_114699275.1 mcr-8.1
|
|
estrain@4
|
2080 Protein Added: WP_114699276.1 blaOXA-659
|
|
estrain@4
|
2081 Protein Added: WP_114699277.1 blaVIM-60
|
|
estrain@4
|
2082 Protein Added: WP_114699278.1 mcr-5.3
|
|
estrain@4
|
2083 Protein Added: WP_114699279.1 blaOXA-660
|
|
estrain@4
|
2084 Protein Added: WP_114699280.1 blaIMP-76
|
|
estrain@4
|
2085 Protein Added: WP_114699281.1 blaIMP-77
|
|
estrain@4
|
2086 Protein Added: WP_114699282.1 blaIMP-78
|
|
estrain@4
|
2087 Protein Added: WP_114699283.1 blaVIM-59
|
|
estrain@4
|
2088 Protein Added: WP_114699284.1 blaCTX-M-221
|
|
estrain@4
|
2089 - AMR HMM library Changes:
|
|
estrain@4
|
2090 Prev. Release: 557
|
|
estrain@4
|
2091 This Release: 563
|
|
estrain@4
|
2092 Removed: 0
|
|
estrain@4
|
2093 Added: 6
|
|
estrain@4
|
2094 HMM Added: NF033648.1 blaOXA-274_like
|
|
estrain@4
|
2095 HMM Added: NF033666.1 blaOXA-664_like
|
|
estrain@4
|
2096 HMM Added: NF033667.0 blaOXA-55_like
|
|
estrain@4
|
2097 HMM Added: NF033669.1 polymyxin_MCR8
|
|
estrain@4
|
2098 HMM Added: NF033670.1 polymyxin_MCR6
|
|
estrain@4
|
2099 HMM Added: NF033671.1 polymyxin_MCR7
|
|
estrain@4
|
2100 - Protein family changes:
|
|
estrain@4
|
2101 Prev. Release: 1123
|
|
estrain@4
|
2102 This Release: 1128
|
|
estrain@4
|
2103 Removed: 0
|
|
estrain@4
|
2104 Added: 5
|
|
estrain@4
|
2105 Family Added: - blaOXA-266_fam
|
|
estrain@4
|
2106 Family Added: NF033648.1 blaOXA-274_like
|
|
estrain@4
|
2107 Family Added: NF033667.1 blaOXA-55_like
|
|
estrain@4
|
2108 Family Added: NF033666.1 blaOXA-664_like
|
|
estrain@4
|
2109 Family Added: NF033669.1 mcr-8
|
|
estrain@4
|
2110 HMM Added: mcr-6 updated to NF033670.1 mcr-6
|
|
estrain@4
|
2111 HMM Added: mcr-7 updated to NF033671.1 mcr-7
|
|
estrain@4
|
2112
|
|
estrain@4
|
2113 Updates in 2018-07-07.1
|
|
estrain@4
|
2114 - Fix in amr_report.cpp to remove extra field from AMRFinder output
|
|
estrain@4
|
2115
|
|
estrain@4
|
2116 Updates in 2018-06-27.1
|
|
estrain@4
|
2117 - Summary:
|
|
estrain@4
|
2118 - Protein sequences
|
|
estrain@4
|
2119 - Removed 1 protein sequence
|
|
estrain@4
|
2120 - Added 290 protein sequences
|
|
estrain@4
|
2121 - Changed the names of 2 proteins
|
|
estrain@4
|
2122 - Gene families
|
|
estrain@4
|
2123 - cfr was reorganized
|
|
estrain@4
|
2124 - HMM library
|
|
estrain@4
|
2125 - 58 HMMs not in the AMR family hierarchy were removed. They were not
|
|
estrain@4
|
2126 used for AMR gene identification so this should have no effect on
|
|
estrain@4
|
2127 AMRFinder output.
|
|
estrain@4
|
2128 - The polymyxin_MCR3 HMM was updated
|
|
estrain@4
|
2129 - Details:
|
|
estrain@4
|
2130 Protein Removed: WP_063945333.1 aac(6')-IIa
|
|
estrain@4
|
2131 Protein Added: WP_000131886.1 aac(3)-VIa
|
|
estrain@4
|
2132 Protein Added: WP_000778180.1 varG
|
|
estrain@4
|
2133 Protein Added: WP_001100752.1 blaPER-10
|
|
estrain@4
|
2134 Protein Added: WP_002812372.1 blaOXA-578
|
|
estrain@4
|
2135 Protein Added: WP_002824679.1 blaOXA-595
|
|
estrain@4
|
2136 Protein Added: WP_002837769.1 blaOXA-579
|
|
estrain@4
|
2137 Protein Added: WP_002857546.1 blaOXA-592
|
|
estrain@4
|
2138 Protein Added: WP_002889704.1 blaOXA-591
|
|
estrain@4
|
2139 Protein Added: WP_002936877.1 blaOXA-623
|
|
estrain@4
|
2140 Protein Added: WP_011339581.1 blaRHO
|
|
estrain@4
|
2141 Protein Added: WP_011497575.1 blaSHN-1
|
|
estrain@4
|
2142 Protein Added: WP_011550565.1 blaMYX-1
|
|
estrain@4
|
2143 Protein Added: WP_011638903.1 mcr-4.3
|
|
estrain@4
|
2144 Protein Added: WP_012263521.1 mupA
|
|
estrain@4
|
2145 Protein Added: WP_012541790.1 blaLEN-28
|
|
estrain@4
|
2146 Protein Added: WP_012698469.1 blaLHK-7
|
|
estrain@4
|
2147 Protein Added: WP_013255389.1 blaSPS-1
|
|
estrain@4
|
2148 Protein Added: WP_013992183.1 blaZOG-1
|
|
estrain@4
|
2149 Protein Added: WP_014206564.1 blaOXA-642
|
|
estrain@4
|
2150 Protein Added: WP_015058260.1 qnrS11
|
|
estrain@4
|
2151 Protein Added: WP_015266427.1 blaECV-1
|
|
estrain@4
|
2152 Protein Added: WP_015431537.1 blaROB-2
|
|
estrain@4
|
2153 Protein Added: WP_015818996.1 blaTTU-1
|
|
estrain@4
|
2154 Protein Added: WP_016252988.1 blaPDC-286
|
|
estrain@4
|
2155 Protein Added: WP_021018581.1 catB8
|
|
estrain@4
|
2156 Protein Added: WP_025006557.1 blaOXA-580
|
|
estrain@4
|
2157 Protein Added: WP_026025287.1 blaALI-1
|
|
estrain@4
|
2158 Protein Added: WP_031192893.1 aadA31
|
|
estrain@4
|
2159 Protein Added: WP_034035338.1 blaPDC-240
|
|
estrain@4
|
2160 Protein Added: WP_035203840.1 catA10
|
|
estrain@4
|
2161 Protein Added: WP_038333643.1 blaEBR-2
|
|
estrain@4
|
2162 Protein Added: WP_038640920.1 qnrB12
|
|
estrain@4
|
2163 Protein Added: WP_041079981.1 erm(44)v
|
|
estrain@4
|
2164 Protein Added: WP_041258349.1 blaFIA-1
|
|
estrain@4
|
2165 Protein Added: WP_041385949.1 blaSGM-2
|
|
estrain@4
|
2166 Protein Added: WP_041449074.1 blaANA-1
|
|
estrain@4
|
2167 Protein Added: WP_043774378.1 catA13
|
|
estrain@4
|
2168 Protein Added: WP_043942497.1 blaPST-1
|
|
estrain@4
|
2169 Protein Added: WP_044600959.1 blaOXA-594
|
|
estrain@4
|
2170 Protein Added: WP_044779552.1 blaOXA-638
|
|
estrain@4
|
2171 Protein Added: WP_048236419.1 qnrB85
|
|
estrain@4
|
2172 Protein Added: WP_052259183.1 erm(42)
|
|
estrain@4
|
2173 Protein Added: WP_052781249.1 blaOXA-583
|
|
estrain@4
|
2174 Protein Added: WP_052788483.1 blaOXA-611
|
|
estrain@4
|
2175 Protein Added: WP_052788887.1 blaOXA-581
|
|
estrain@4
|
2176 Protein Added: WP_052794776.1 blaOXA-625
|
|
estrain@4
|
2177 Protein Added: WP_052798312.1 blaOXA-609
|
|
estrain@4
|
2178 Protein Added: WP_052800105.1 blaOXA-597
|
|
estrain@4
|
2179 Protein Added: WP_052803794.1 blaOXA-601
|
|
estrain@4
|
2180 Protein Added: WP_052858477.1 blaOXA-637
|
|
estrain@4
|
2181 Protein Added: WP_053872444.1 blaOXA-639
|
|
estrain@4
|
2182 Protein Added: WP_053921012.1 blaOXA-603
|
|
estrain@4
|
2183 Protein Added: WP_057036510.1 blaOXA-629
|
|
estrain@4
|
2184 Protein Added: WP_058157026.1 blaPDC-271
|
|
estrain@4
|
2185 Protein Added: WP_058174497.1 blaPDC-250
|
|
estrain@4
|
2186 Protein Added: WP_058870660.1 blaOXA-651
|
|
estrain@4
|
2187 Protein Added: WP_058951457.1 blaOXA-652
|
|
estrain@4
|
2188 Protein Added: WP_061193431.1 blaPDC-298
|
|
estrain@4
|
2189 Protein Added: WP_064186845.1 qnrS13
|
|
estrain@4
|
2190 Protein Added: WP_065597326.1 blaALI-2
|
|
estrain@4
|
2191 Protein Added: WP_065801616.1 mcr-3.20
|
|
estrain@4
|
2192 Protein Added: WP_065908739.1 qnrB91
|
|
estrain@4
|
2193 Protein Added: WP_070233680.1 blaOXA-614
|
|
estrain@4
|
2194 Protein Added: WP_070698497.1 blaPDC-278
|
|
estrain@4
|
2195 Protein Added: WP_071701819.1 qnrS12
|
|
estrain@4
|
2196 Protein Added: WP_071846333.1 aac(6')_Serra
|
|
estrain@4
|
2197 Protein Added: WP_073669325.1 blaPDC-285
|
|
estrain@4
|
2198 Protein Added: WP_075606311.1 blaROB-3
|
|
estrain@4
|
2199 Protein Added: WP_078207746.1 qnrE2
|
|
estrain@4
|
2200 Protein Added: WP_078318620.1 blaROB-4
|
|
estrain@4
|
2201 Protein Added: WP_080699425.1 blaTEM-229
|
|
estrain@4
|
2202 Protein Added: WP_081048762.1 blaMYO-1
|
|
estrain@4
|
2203 Protein Added: WP_081666691.1 blaLHK-1
|
|
estrain@4
|
2204 Protein Added: WP_085843691.1 qnrB95
|
|
estrain@4
|
2205 Protein Added: WP_087696200.1 blaOXA-576
|
|
estrain@4
|
2206 Protein Added: WP_087879616.1 mcr-3.19
|
|
estrain@4
|
2207 Protein Added: WP_088303859.1 blaOXA-624
|
|
estrain@4
|
2208 Protein Added: WP_094308975.1 mcr-3.22
|
|
estrain@4
|
2209 Protein Added: WP_094312656.1 mcr-3.21
|
|
estrain@4
|
2210 Protein Added: WP_094313523.1 mcr-3.23
|
|
estrain@4
|
2211 Protein Added: WP_094321595.1 mcr-3.24
|
|
estrain@4
|
2212 Protein Added: WP_094963248.1 aadA31
|
|
estrain@4
|
2213 Protein Added: WP_096170112.1 qnrS14
|
|
estrain@4
|
2214 Protein Added: WP_096865225.1 blaPER-12
|
|
estrain@4
|
2215 Protein Added: WP_100831609.1 blaPDC-245
|
|
estrain@4
|
2216 Protein Added: WP_103034696.1 blaROB-5
|
|
estrain@4
|
2217 Protein Added: WP_103252528.1 mcr-3.25
|
|
estrain@4
|
2218 Protein Added: WP_104009831.1 blaPER-11
|
|
estrain@4
|
2219 Protein Added: WP_104009832.1 blaPDC-234
|
|
estrain@4
|
2220 Protein Added: WP_104009833.1 blaPDC-235
|
|
estrain@4
|
2221 Protein Added: WP_104009834.1 blaPDC-236
|
|
estrain@4
|
2222 Protein Added: WP_104009835.1 blaPDC-237
|
|
estrain@4
|
2223 Protein Added: WP_104009836.1 blaPDC-238
|
|
estrain@4
|
2224 Protein Added: WP_104009837.1 blaPDC-239
|
|
estrain@4
|
2225 Protein Added: WP_104009838.1 blaPDC-241
|
|
estrain@4
|
2226 Protein Added: WP_104009839.1 blaPDC-242
|
|
estrain@4
|
2227 Protein Added: WP_104009840.1 blaPDC-243
|
|
estrain@4
|
2228 Protein Added: WP_104009841.1 blaPDC-244
|
|
estrain@4
|
2229 Protein Added: WP_104009842.1 blaPDC-246
|
|
estrain@4
|
2230 Protein Added: WP_104009843.1 blaPDC-247
|
|
estrain@4
|
2231 Protein Added: WP_104009844.1 blaPDC-248
|
|
estrain@4
|
2232 Protein Added: WP_104009846.1 blaVIM-56
|
|
estrain@4
|
2233 Protein Added: WP_104009847.1 blaCTX-M-178
|
|
estrain@4
|
2234 Protein Added: WP_104009848.1 blaCTX-M-187
|
|
estrain@4
|
2235 Protein Added: WP_104009849.1 blaCMY-156
|
|
estrain@4
|
2236 Protein Added: WP_104009850.1 mcr-1.12
|
|
estrain@4
|
2237 Protein Added: WP_104009851.1 mcr-7.1
|
|
estrain@4
|
2238 Protein Added: WP_104009852.1 blaIMP-71
|
|
estrain@4
|
2239 Protein Added: WP_104009853.1 blaOXA-575
|
|
estrain@4
|
2240 Protein Added: WP_104009854.1 blaTEM-230
|
|
estrain@4
|
2241 Protein Added: WP_104009855.1 blaTEM-231
|
|
estrain@4
|
2242 Protein Added: WP_104009856.1 blaPDC-227
|
|
estrain@4
|
2243 Protein Added: WP_104009857.1 blaPDC-228
|
|
estrain@4
|
2244 Protein Added: WP_104009858.1 blaPDC-229
|
|
estrain@4
|
2245 Protein Added: WP_104009859.1 blaPDC-230
|
|
estrain@4
|
2246 Protein Added: WP_104009860.1 blaPDC-231
|
|
estrain@4
|
2247 Protein Added: WP_104009861.1 blaPDC-232
|
|
estrain@4
|
2248 Protein Added: WP_104009862.1 blaPDC-233
|
|
estrain@4
|
2249 Protein Added: WP_104531863.1 blaBUT-1
|
|
estrain@4
|
2250 Protein Added: WP_104531864.1 blaBUT-2
|
|
estrain@4
|
2251 Protein Added: WP_104531865.1 blaLHK-2
|
|
estrain@4
|
2252 Protein Added: WP_104531866.1 blaLHK-3
|
|
estrain@4
|
2253 Protein Added: WP_104531867.1 blaLHK-4
|
|
estrain@4
|
2254 Protein Added: WP_104531868.1 blaLHK-5
|
|
estrain@4
|
2255 Protein Added: WP_104531869.1 blaLHK-6
|
|
estrain@4
|
2256 Protein Added: WP_106672612.1 blaCMY-150
|
|
estrain@4
|
2257 Protein Added: WP_106924209.1 blaCTX-M-213
|
|
estrain@4
|
2258 Protein Added: WP_109544237.1 tet(S)
|
|
estrain@4
|
2259 Protein Added: WP_109545031.1 dfrA14
|
|
estrain@4
|
2260 Protein Added: WP_109545032.1 qnrB11
|
|
estrain@4
|
2261 Protein Added: WP_109545033.1 vanY-D
|
|
estrain@4
|
2262 Protein Added: WP_109545034.1 qnrB22
|
|
estrain@4
|
2263 Protein Added: WP_109545035.1 qacF
|
|
estrain@4
|
2264 Protein Added: WP_109545038.1 tet(33)
|
|
estrain@4
|
2265 Protein Added: WP_109545039.1 blaSTA-1
|
|
estrain@4
|
2266 Protein Added: WP_109545040.1 chrB
|
|
estrain@4
|
2267 Protein Added: WP_109545041.1 aph(3'')-Ib
|
|
estrain@4
|
2268 Protein Added: WP_109545042.1 blaORR-1
|
|
estrain@4
|
2269 Protein Added: WP_109545044.1 blaKPC-34
|
|
estrain@4
|
2270 Protein Added: WP_109545045.1 qnrD3
|
|
estrain@4
|
2271 Protein Added: WP_109545046.1 qnrB81
|
|
estrain@4
|
2272 Protein Added: WP_109545047.1 qnrB82
|
|
estrain@4
|
2273 Protein Added: WP_109545048.1 blaOXA-542
|
|
estrain@4
|
2274 Protein Added: WP_109545049.1 blaNDM-20
|
|
estrain@4
|
2275 Protein Added: WP_109545050.1 blaCRH-2
|
|
estrain@4
|
2276 Protein Added: WP_109545051.1 blaCRH-3
|
|
estrain@4
|
2277 Protein Added: WP_109545053.1 blaIMP-73
|
|
estrain@4
|
2278 Protein Added: WP_109545054.1 mcr-4.5
|
|
estrain@4
|
2279 Protein Added: WP_109545055.1 mcr-4.4
|
|
estrain@4
|
2280 Protein Added: WP_109545056.1 mcr-1.13
|
|
estrain@4
|
2281 Protein Added: WP_109545057.1 mcr-5.2
|
|
estrain@4
|
2282 Protein Added: WP_109545058.1 mcr-4.2
|
|
estrain@4
|
2283 Protein Added: WP_109545059.1 blaTEM-232
|
|
estrain@4
|
2284 Protein Added: WP_109545060.1 blaCTX-M-208
|
|
estrain@4
|
2285 Protein Added: WP_109545061.1 blaCTX-M-209
|
|
estrain@4
|
2286 Protein Added: WP_109545062.1 blaCTX-M-210
|
|
estrain@4
|
2287 Protein Added: WP_109545063.1 blaCTX-M-211
|
|
estrain@4
|
2288 Protein Added: WP_109545064.1 blaCTX-M-212
|
|
estrain@4
|
2289 Protein Added: WP_109545065.1 blaCMY-161
|
|
estrain@4
|
2290 Protein Added: WP_109545066.1 blaFOX-16
|
|
estrain@4
|
2291 Protein Added: WP_109545067.1 blaDHA-27
|
|
estrain@4
|
2292 Protein Added: WP_109545068.1 blaDHA-26
|
|
estrain@4
|
2293 Protein Added: WP_109545069.1 blaCTX-M-214
|
|
estrain@4
|
2294 Protein Added: WP_109545070.1 mcr-3.12
|
|
estrain@4
|
2295 Protein Added: WP_109545071.1 blaOXA-649
|
|
estrain@4
|
2296 Protein Added: WP_109545072.1 blaOXA-641
|
|
estrain@4
|
2297 Protein Added: WP_109545073.1 blaFRI-5
|
|
estrain@4
|
2298 Protein Added: WP_109545074.1 blaGPC-1
|
|
estrain@4
|
2299 Protein Added: WP_109545075.1 blaOXA-619
|
|
estrain@4
|
2300 Protein Added: WP_109545076.1 blaOXA-620
|
|
estrain@4
|
2301 Protein Added: WP_109545077.1 blaOXA-636
|
|
estrain@4
|
2302 Protein Added: WP_109545078.1 blaOXA-635
|
|
estrain@4
|
2303 Protein Added: WP_109545079.1 blaOXA-631
|
|
estrain@4
|
2304 Protein Added: WP_109545080.1 blaOXA-626
|
|
estrain@4
|
2305 Protein Added: WP_109545081.1 blaOXA-627
|
|
estrain@4
|
2306 Protein Added: WP_109545082.1 blaOXA-633
|
|
estrain@4
|
2307 Protein Added: WP_109545083.1 blaOXA-628
|
|
estrain@4
|
2308 Protein Added: WP_109545084.1 blaOXA-634
|
|
estrain@4
|
2309 Protein Added: WP_109545085.1 blaOXA-630
|
|
estrain@4
|
2310 Protein Added: WP_109545086.1 blaOXA-632
|
|
estrain@4
|
2311 Protein Added: WP_109545087.1 blaOXA-608
|
|
estrain@4
|
2312 Protein Added: WP_109545088.1 blaOXA-584
|
|
estrain@4
|
2313 Protein Added: WP_109545089.1 blaOXA-585
|
|
estrain@4
|
2314 Protein Added: WP_109545090.1 blaOXA-586
|
|
estrain@4
|
2315 Protein Added: WP_109545091.1 blaOXA-577
|
|
estrain@4
|
2316 Protein Added: WP_109545092.1 blaOXA-587
|
|
estrain@4
|
2317 Protein Added: WP_109545093.1 blaOXA-596
|
|
estrain@4
|
2318 Protein Added: WP_109545094.1 blaOXA-600
|
|
estrain@4
|
2319 Protein Added: WP_109545095.1 blaOXA-588
|
|
estrain@4
|
2320 Protein Added: WP_109545096.1 blaOXA-589
|
|
estrain@4
|
2321 Protein Added: WP_109545097.1 blaOXA-593
|
|
estrain@4
|
2322 Protein Added: WP_109545098.1 blaOXA-599
|
|
estrain@4
|
2323 Protein Added: WP_109545099.1 blaOXA-610
|
|
estrain@4
|
2324 Protein Added: WP_109545100.1 blaOXA-612
|
|
estrain@4
|
2325 Protein Added: WP_109545101.1 blaOXA-598
|
|
estrain@4
|
2326 Protein Added: WP_109545102.1 blaOXA-607
|
|
estrain@4
|
2327 Protein Added: WP_109545103.1 blaOXA-590
|
|
estrain@4
|
2328 Protein Added: WP_109545104.1 blaOXA-604
|
|
estrain@4
|
2329 Protein Added: WP_109545105.1 blaOXA-602
|
|
estrain@4
|
2330 Protein Added: WP_109545106.1 blaOXA-606
|
|
estrain@4
|
2331 Protein Added: WP_109545107.1 blaOXA-582
|
|
estrain@4
|
2332 Protein Added: WP_109545108.1 blaOXA-605
|
|
estrain@4
|
2333 Protein Added: WP_109545109.1 blaOXA-640
|
|
estrain@4
|
2334 Protein Added: WP_109545110.1 blaOXA-616
|
|
estrain@4
|
2335 Protein Added: WP_109545111.1 blaOXA-613
|
|
estrain@4
|
2336 Protein Added: WP_109545112.1 blaOXA-622
|
|
estrain@4
|
2337 Protein Added: WP_109545113.1 blaOXA-618
|
|
estrain@4
|
2338 Protein Added: WP_109545114.1 blaOXA-617
|
|
estrain@4
|
2339 Protein Added: WP_109545115.1 blaOXA-615
|
|
estrain@4
|
2340 Protein Added: WP_109545116.1 blaOXA-621
|
|
estrain@4
|
2341 Protein Added: WP_109791184.1 blaTEM-233
|
|
estrain@4
|
2342 Protein Added: WP_109791185.1 blaPDC-251
|
|
estrain@4
|
2343 Protein Added: WP_109791186.1 blaPDC-252
|
|
estrain@4
|
2344 Protein Added: WP_109791187.1 blaPDC-253
|
|
estrain@4
|
2345 Protein Added: WP_109791188.1 blaPDC-254
|
|
estrain@4
|
2346 Protein Added: WP_109791189.1 blaPDC-255
|
|
estrain@4
|
2347 Protein Added: WP_109791190.1 blaPDC-256
|
|
estrain@4
|
2348 Protein Added: WP_109791191.1 blaPDC-257
|
|
estrain@4
|
2349 Protein Added: WP_109791192.1 blaPDC-258
|
|
estrain@4
|
2350 Protein Added: WP_109791193.1 blaPDC-259
|
|
estrain@4
|
2351 Protein Added: WP_109791194.1 blaPDC-260
|
|
estrain@4
|
2352 Protein Added: WP_109791195.1 blaPDC-261
|
|
estrain@4
|
2353 Protein Added: WP_109791196.1 blaPDC-262
|
|
estrain@4
|
2354 Protein Added: WP_109791197.1 blaPDC-263
|
|
estrain@4
|
2355 Protein Added: WP_109791198.1 blaPDC-264
|
|
estrain@4
|
2356 Protein Added: WP_109791199.1 blaPDC-265
|
|
estrain@4
|
2357 Protein Added: WP_109791200.1 blaPDC-266
|
|
estrain@4
|
2358 Protein Added: WP_109791201.1 blaPDC-267
|
|
estrain@4
|
2359 Protein Added: WP_109791202.1 blaPDC-268
|
|
estrain@4
|
2360 Protein Added: WP_109791203.1 blaPDC-270
|
|
estrain@4
|
2361 Protein Added: WP_109791204.1 blaPDC-272
|
|
estrain@4
|
2362 Protein Added: WP_109791205.1 blaPDC-273
|
|
estrain@4
|
2363 Protein Added: WP_109791206.1 blaPDC-274
|
|
estrain@4
|
2364 Protein Added: WP_109791207.1 blaIMP-74
|
|
estrain@4
|
2365 Protein Added: WP_109791208.1 blaIMP-75
|
|
estrain@4
|
2366 Protein Added: WP_109791209.1 blaCTX-M-216
|
|
estrain@4
|
2367 Protein Added: WP_109791210.1 blaTEM-234
|
|
estrain@4
|
2368 Protein Added: WP_109791211.1 blaCTX-M-217
|
|
estrain@4
|
2369 Protein Added: WP_109791212.1 blaSHV-204
|
|
estrain@4
|
2370 Protein Added: WP_109791213.1 blaNDM-22
|
|
estrain@4
|
2371 Protein Added: WP_109791214.1 blaCTX-M-218
|
|
estrain@4
|
2372 Protein Added: WP_109791215.1 blaCMY-160
|
|
estrain@4
|
2373 Protein Added: WP_109791216.1 blaOXA-654
|
|
estrain@4
|
2374 Protein Added: WP_109997726.1 qnrA9
|
|
estrain@4
|
2375 Protein Added: WP_110092882.1 blaCTX-M-219
|
|
estrain@4
|
2376 Protein Added: WP_111273842.1 mcr-3.13
|
|
estrain@4
|
2377 Protein Added: WP_111273843.1 mcr-3.14
|
|
estrain@4
|
2378 Protein Added: WP_111273844.1 mcr-3.15
|
|
estrain@4
|
2379 Protein Added: WP_111273845.1 mcr-3.16
|
|
estrain@4
|
2380 Protein Added: WP_111273846.1 mcr-3.17
|
|
estrain@4
|
2381 Protein Added: WP_111273847.1 mcr-3.18
|
|
estrain@4
|
2382 Protein Added: WP_111273848.1 blaGES-35
|
|
estrain@4
|
2383 Protein Added: WP_111273849.1 blaGES-36
|
|
estrain@4
|
2384 Protein Added: WP_111273850.1 blaGES-37
|
|
estrain@4
|
2385 Protein Added: WP_111273851.1 blaCMY-162
|
|
estrain@4
|
2386 Protein Added: WP_111273852.1 blaKPC-35
|
|
estrain@4
|
2387 Protein Added: WP_111672883.1 blaPDC-275
|
|
estrain@4
|
2388 Protein Added: WP_111672884.1 blaPDC-294
|
|
estrain@4
|
2389 Protein Added: WP_111672885.1 blaPDC-295
|
|
estrain@4
|
2390 Protein Added: WP_111672886.1 blaPDC-296
|
|
estrain@4
|
2391 Protein Added: WP_111672887.1 blaPDC-297
|
|
estrain@4
|
2392 Protein Added: WP_111672888.1 blaPDC-299
|
|
estrain@4
|
2393 Protein Added: WP_111672889.1 blaPDC-300
|
|
estrain@4
|
2394 Protein Added: WP_111672890.1 blaPDC-276
|
|
estrain@4
|
2395 Protein Added: WP_111672891.1 blaPDC-277
|
|
estrain@4
|
2396 Protein Added: WP_111672892.1 blaPDC-279
|
|
estrain@4
|
2397 Protein Added: WP_111672893.1 blaPDC-280
|
|
estrain@4
|
2398 Protein Added: WP_111672894.1 blaPDC-281
|
|
estrain@4
|
2399 Protein Added: WP_111672895.1 blaPDC-282
|
|
estrain@4
|
2400 Protein Added: WP_111672896.1 blaPDC-283
|
|
estrain@4
|
2401 Protein Added: WP_111672897.1 blaPDC-284
|
|
estrain@4
|
2402 Protein Added: WP_111672898.1 blaPDC-287
|
|
estrain@4
|
2403 Protein Added: WP_111672899.1 blaPDC-288
|
|
estrain@4
|
2404 Protein Added: WP_111672900.1 blaPDC-289
|
|
estrain@4
|
2405 Protein Added: WP_111672901.1 blaPDC-290
|
|
estrain@4
|
2406 Protein Added: WP_111672902.1 blaCTX-M-220
|
|
estrain@4
|
2407 Protein Added: WP_111672903.1 blaPDC-291
|
|
estrain@4
|
2408 Protein Added: WP_111672904.1 blaPDC-292
|
|
estrain@4
|
2409 Protein Added: WP_111672905.1 blaPDC-293
|
|
estrain@4
|
2410 Protein Added: WP_111672906.1 blaCMY-163
|
|
estrain@4
|
2411 Protein Added: WP_111672907.1 blaOXA-657
|
|
estrain@4
|
2412 Protein Added: WP_111672908.1 blaPDC-301
|
|
estrain@4
|
2413 Protein Added: WP_111672909.1 blaPDC-302
|
|
estrain@4
|
2414 Protein Added: WP_111672910.1 blaPDC-303
|
|
estrain@4
|
2415 Protein Added: WP_111672911.1 blaKPC-23
|
|
estrain@4
|
2416 Protein Added: WP_111672912.1 blaNDM-23
|
|
estrain@4
|
2417 Protein Added: WP_111672913.1 blaNDM-24
|
|
estrain@4
|
2418 Protein Added: WP_111672914.1 blaVIM-57
|
|
estrain@4
|
2419 Protein Added: WP_111690897.1 cfr(B)
|
|
estrain@4
|
2420 Protein Added: WP_111690898.1 cfr(C)
|
|
estrain@4
|
2421 Protein Modified: WP_011987126.1 cfrC updated to WP_011987126.1 cfr-Cb
|
|
estrain@4
|
2422 Protein Modified: WP_063854808.1 qnrS updated to WP_063854808.1 qnrS10
|
|
estrain@4
|
2423 HMM Removed: NF000031.1 MFS_efflux_LmrA
|
|
estrain@4
|
2424 HMM Removed: NF000040.1 172051428_tet
|
|
estrain@4
|
2425 HMM Removed: NF000058.1 Erm41
|
|
estrain@4
|
2426 HMM Removed: NF000060.1 MFS_efflux_LmrB
|
|
estrain@4
|
2427 HMM Removed: NF000106.1 40850658_otr
|
|
estrain@4
|
2428 HMM Removed: NF000131.1 MATE_multi_MepA
|
|
estrain@4
|
2429 HMM Removed: NF000140.3 AAC_6p_Salmo
|
|
estrain@4
|
2430 HMM Removed: NF000217.1 MATE_multi_FepA
|
|
estrain@4
|
2431 HMM Removed: NF000247.1 MexA
|
|
estrain@4
|
2432 HMM Removed: NF000249.1 MexE
|
|
estrain@4
|
2433 HMM Removed: NF000250.1 MexH
|
|
estrain@4
|
2434 HMM Removed: NF000251.1 MexW-MexI
|
|
estrain@4
|
2435 HMM Removed: NF000252.1 MexX
|
|
estrain@4
|
2436 HMM Removed: NF000263.1 MATE_multi_NorM
|
|
estrain@4
|
2437 HMM Removed: NF000282.2 RND_permease_1
|
|
estrain@4
|
2438 HMM Removed: NF000313.1 adeA-adeI
|
|
estrain@4
|
2439 HMM Removed: NF000314.1 adeB
|
|
estrain@4
|
2440 HMM Removed: NF000315.1 adeC-adeK-oprM
|
|
estrain@4
|
2441 HMM Removed: NF000334.3 drrA
|
|
estrain@4
|
2442 HMM Removed: NF000336.1 emrE
|
|
estrain@4
|
2443 HMM Removed: NF000342.3 glpA_Cterm
|
|
estrain@4
|
2444 HMM Removed: NF000344.1 macA
|
|
estrain@4
|
2445 HMM Removed: NF000345.1 macB
|
|
estrain@4
|
2446 HMM Removed: NF000349.1 mfpA_AE000516.2
|
|
estrain@4
|
2447 HMM Removed: NF000352.1 norA
|
|
estrain@4
|
2448 HMM Removed: NF000357.1 romA
|
|
estrain@4
|
2449 HMM Removed: NF000391.1 EmrB
|
|
estrain@4
|
2450 HMM Removed: NF010314.2 PRK13751.2
|
|
estrain@4
|
2451 HMM Removed: NF012135.0 ANT_3pp_9_crypt
|
|
estrain@4
|
2452 HMM Removed: NF012144.2 ramA_TF
|
|
estrain@4
|
2453 HMM Removed: NF012163.2 BaeS_SmeS
|
|
estrain@4
|
2454 HMM Removed: NF012168.1 BlaI_of_BCL
|
|
estrain@4
|
2455 HMM Removed: NF012198.0 MarA_TF
|
|
estrain@4
|
2456 HMM Removed: NF012208.0 SDR_dihy_bifunc
|
|
estrain@4
|
2457 HMM Removed: NF012226.0 AdeS_HK
|
|
estrain@4
|
2458 HMM Removed: NF012227.0 AdeR_RR
|
|
estrain@4
|
2459 HMM Removed: NF012228.1 RobA_TF
|
|
estrain@4
|
2460 HMM Removed: NF028537.1 P_eth_NH2_trans
|
|
estrain@4
|
2461 HMM Removed: NF030466.0 TIGR02052
|
|
estrain@4
|
2462 HMM Removed: NF030467.0 TIGR02053
|
|
estrain@4
|
2463 HMM Removed: NF033086.2 penta_rpt_Qnr
|
|
estrain@4
|
2464 HMM Removed: NF033124.1 estX
|
|
estrain@4
|
2465 HMM Removed: NF033134.0 cmlA_floR
|
|
estrain@4
|
2466 HMM Removed: NF033138.1 RND-peri-MexC
|
|
estrain@4
|
2467 HMM Removed: NF033142.1 efflux_OM_AdeC
|
|
estrain@4
|
2468 HMM Removed: NF033143.1 efflux_OM_AdeK
|
|
estrain@4
|
2469 HMM Removed: NF033184.1 B3_Acin_new1
|
|
estrain@4
|
2470 HMM Removed: NF033480.1 bifunc_MprF
|
|
estrain@4
|
2471 HMM Removed: NF033553.1 MerP_Gpos
|
|
estrain@4
|
2472 HMM Removed: NF033555.1 lyase_MerB
|
|
estrain@4
|
2473 HMM Removed: NF033556.1 MerTP_fusion
|
|
estrain@4
|
2474 HMM Removed: NF033560.1 merT_RC607
|
|
estrain@4
|
2475 HMM Removed: NF033565.0 trans_MerF
|
|
estrain@4
|
2476 HMM Removed: NF033606.1 heat_AAA_ClpK
|
|
estrain@4
|
2477 HMM Removed: NF033607.0 disagg_AAA_ClpG
|
|
estrain@4
|
2478 HMM Removed: NF033617.1 RND_permease_2
|
|
estrain@4
|
2479 HMM Removed: NF033627.1 intimin_all
|
|
estrain@4
|
2480 HMM Removed: NF033636.1 acid_shock_Asr
|
|
estrain@4
|
2481 HMM Modified: NF033408.2 polymyxin_MCR3 updated to NF033408.5 polymyxin_MCR3
|
|
estrain@4
|
2482 Family Removed: - cfrC
|
|
estrain@4
|
2483 Family Added: - cfr(B)
|
|
estrain@4
|
2484 Family Added: - cfr(C)
|
|
estrain@4
|
2485 Family Added: - cfr-Cb
|
|
estrain@4
|
2486 Family Changed: NF033408.2 mcr-3 updated to NF033408.5 mcr-3
|
|
estrain@4
|
2487
|
|
estrain@4
|
2488 ---------------------------------------------------------------------
|
|
estrain@4
|
2489 Changes included in 2018-05-15.1
|
|
estrain@4
|
2490 ---------------------------------------------------------------------
|
|
estrain@4
|
2491 - Data Changes:
|
|
estrain@4
|
2492 Protein Removed: WP_010886396.1 lmr(B)
|
|
estrain@4
|
2493 HMM Added: NF033614.1 APH_6_Ic_gen
|
|
estrain@4
|
2494 HMM Added: NF033617.1 RND_permease_2
|
|
estrain@4
|
2495 HMM Added: NF033626.1 blaBKC_GPC
|
|
estrain@4
|
2496 HMM Added: NF033627.1 intimin_all
|
|
estrain@4
|
2497 HMM Added: NF033636.1 acid_shock_Asr
|
|
estrain@4
|
2498 HMM Modified: NF000011.1 APH_6_Ic updated to NF000011.2 APH_6_Ic
|
|
estrain@4
|
2499 HMM Modified: NF000221.3 FosA updated to NF000221.4 FosA
|
|
estrain@4
|
2500 HMM Modified: NF000282.1 RND_permease_1 updated to NF000282.2 RND_permease_1
|
|
estrain@4
|
2501 HMM Modified: NF000428.2 blaFRI updated to NF000428.4 blaFRI
|
|
estrain@4
|
2502 HMM Modified: NF033582.0 blaALI updated to NF033582.2 blaALI
|
|
estrain@4
|
2503 Family Removed: NF000060.1 lmr(B)
|
|
estrain@4
|
2504 Family Added: NF033626.1 blaBKC_GPC
|
|
estrain@4
|
2505 Family Added: - blaGPC
|
|
estrain@4
|
2506 - Algorithm Changes:
|
|
estrain@4
|
2507 - Partial proteins identified as "Method" PARTIAL if length of blast
|
|
estrain@4
|
2508 alignment > 50% and < 90% of database protein.
|
|
estrain@4
|
2509
|
|
estrain@4
|
2510 ---------------------------------------------------------------------
|
|
estrain@4
|
2511 Changes included in 2018-05-08.1 RELEASE CANDIDATE
|
|
estrain@4
|
2512 ---------------------------------------------------------------------
|
|
estrain@4
|
2513 - Addition of handling for genbank plasmid gff
|
|
estrain@4
|
2514
|
|
estrain@4
|
2515 ---------------------------------------------------------------------
|
|
estrain@4
|
2516 Changes included in 2018-04-16.1
|
|
estrain@4
|
2517 ---------------------------------------------------------------------
|
|
estrain@4
|
2518 - Addition of file format checking for FASTA and GFF files before AMRFinder blast and HMM searches are run
|
|
estrain@4
|
2519 - Altered format of fam.tab file to include NF accessions for families
|
|
estrain@4
|
2520 - Removal of non-reportable families from fam.tab
|
