|
estrain@4
|
1 >contig01 blaTEM-156_cds
|
|
estrain@4
|
2 AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGATACAATAACCCTGATAA
|
|
estrain@4
|
3 ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTT
|
|
estrain@4
|
4 TTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCA
|
|
estrain@4
|
5 GTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
|
|
estrain@4
|
6 GAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTGTTGACG
|
|
estrain@4
|
7 CCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCAC
|
|
estrain@4
|
8 AGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
|
|
estrain@4
|
9 ACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATAG
|
|
estrain@4
|
10 GGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGA
|
|
estrain@4
|
11 CACCACGATGCCTGCAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
|
|
estrain@4
|
12 TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGCAGGACCACTTCTGCGCTCGGCCCTTC
|
|
estrain@4
|
13 CGGCTGGCTGGTTTATTGCTGATAAATCTGGAGCCGGTGAGCGTGGGTCTCGCGGTATCATTGCAGCACT
|
|
estrain@4
|
14 GGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTACACGACGGGGAGTCAGGCAACTATGGATGAA
|
|
estrain@4
|
15 CGAAATAGACAGATCGCTGAGATAGGTGCCTCACTGATTAAGCATTGGTAACTGTCAGACCAAGTTTACT
|
|
estrain@4
|
16 CATA
|
|
estrain@4
|
17
|
|
estrain@4
|
18 >contig02 blaPDC-114_blast_cds
|
|
estrain@4
|
19 ATGCGCGATACCAGATTCCCCTGCCTGTGCGGCATCGCCGCTTCCACACTGCTGTTCGCCACCACCCCGG
|
|
estrain@4
|
20 CCATTGCCGGCGAGGCCCCGGCGGATCGCCTGAAGGCACTGGTCGACGCCGCCGTACAACCGGTGATGAA
|
|
estrain@4
|
21 GGCCAATGACATTCCGGGCCTGGCCGTAGCCATCAGCCTGAAAGGAGAACCGCATTACTTCAGCTATGGG
|
|
estrain@4
|
22 CTGGCCTCGAAAGAGGACGGCCGCCGGGTGACGCCGGAGACCCTGTTCGAGATCGGCTCGGTGAGCAAGA
|
|
estrain@4
|
23 CCTTCACCGCCACCCTCGCCGGCTATGCCCTGACCCAGGACAAGATGCGCCTCGACGACCGCGCCAGCCA
|
|
estrain@4
|
24 GCACTGGCCGGCACTGCAGGGCAGCCGCTTCGACGGCATCAGCCTGCTCGACCTCGCGACCTATACCGCC
|
|
estrain@4
|
25 GGCGGCTTGCCGCTGCAGaTCCCCGACTCGGTGCAGAAGGACCAGGCACAGATCCGCGACTACTACCGCC
|
|
estrain@4
|
26 AGTGGCAGCCGACCTACGCGCCGGGCAGCCAGCGCCTCTATTCCAACCCGAGCATCGGCCTGTTCGGCTA
|
|
estrain@4
|
27 TCTCGCCGCGCGCAGCCTGGGCCAGCCGTTCGAACGGCTCATGGAGCAGCAAGTGTTCCCGGCACTGGGC
|
|
estrain@4
|
28 CTCGAACAGACCCACCTCGACGTGCCCGAGGCGGCGTTGGCGCAGTACGCCCAGGGCTACGGCAAGGACG
|
|
estrain@4
|
29 ACCGCCCGCTACGGGCCGGTCCCGGCCCGCTGGATGCCGAAGGCTACGGGGTGAAGACCAGCGCGGCCGA
|
|
estrain@4
|
30 CCTGCTGCGCTTCGTCGATGCCAACCTGCATCCGGAGCGCCTGGACAGGCCCTGGGCGCAGGCGCTCGAT
|
|
estrain@4
|
31 GCCACCCATCGCGGTTACTACAAGGTCGGCGACATGACCCAGGGCCTGGGCTGGGAAGCCTACGACTGGC
|
|
estrain@4
|
32 CGATCTCCCTGAAGCGCCTGCAGGCCGGCAACTCGACGCCGATGGCGCTGCAACCGCACAGGATCGCCAG
|
|
estrain@4
|
33 GCTGCCCGCGCCACAGGCGCTGGAGGGCCAGCGCCTGCTGAACAAGACCGGTTCCACCAACGGCTTCGGC
|
|
estrain@4
|
34 GCCTACGTGGCGTTCGTCCCGGGCCGCGACCTGGGACTGGTGATCCTGGCCAACCGCAACTATCCCAATG
|
|
estrain@4
|
35 CCGAGCGGGTGAAGATCGCCTACGCCATCCTCAGCGGCCTGGAGCAGCAGGGCAAGGTGCCGCTGAAGCG
|
|
estrain@4
|
36 CTGA
|
|
estrain@4
|
37
|
|
estrain@4
|
38 >contig03 blaOXA-436_partial_cds
|
|
estrain@4
|
39 GCCACAATTGGTCAGCAGTTTGCTATTGAAAGCCCGCCAAGACGGTGCTACTCTTAGCGCCTCATTTTTATGGATTTATTGCATTAGGCAAGGGGACATTATGCGTGCGTTAGCCTTATCGGCTGTGTTGATGGTGACAACGATGATTGGCATGCCTGCGGTGGCAAAGGAGTGGCAAGAGAACAAGAGTTGGAATGCTCACTTTAGCGAACATAAAACCCAAGGCGTGGTTGTGCTCTGGAACGAGAATACACAGCAGGGTTTTACCAACGATCTTAAACGGGCAAACCAAGCATTTTTACCTGCATCGACCTTTAAGATCCCAAACAGTTTAATTGCCTTGGACTTAGGTGTGGTTAAGGATGAGCATCAAGTCTTTAAATGGGATGGACAGACGCGAGATATCGCCGCGTGGAATCGCGACCATGACTTAATCACCGCGATGAAGTATTCGGTTGTGCCTGTTTATCAAGAATTTGCCCGCCAAATTGGCGAGGCCCGTATGAGTAAAATGTTGCACGCCTTCGATTATGGTAATGAGGATATCTCGGGCAATTTGGACAGTTTTTGGCTCGATGGTGGTATTCGCATTTCGGCTACCCAGCAAATCGCTTTTTTACGCAAGCTGTACCACAACAAGTTGCACGTTTCTGAGCGTAGTCAGCGCATCGTTAAACAAGCCATGCTGACCGAGGCAAATGCCGACTATATCATCCGGGCGAAAACTGGCTATTCGGTCAGAATTGAACCGAAAATCGGTTGGTGGGTTGGCTGGATCGAACTGGATGACAATGTGTGGTTCAAGTGGTTAGCGGCGCATTTGTGTAAAATAGCCGTCATATAAGCTGTAAAGTTATATGGACAAAATACTTATAGTCGATGCGCTTATCGCTAATGGCTCA
|
|
estrain@4
|
40
|
|
estrain@4
|
41
|
|
estrain@4
|
42 >contig04 vanG_cds exact
|
|
estrain@4
|
43 ATGACTGGTAGTCAGACGGAAAAAGAATTGTATGTCAACCAATGTAAAATAGCCTATAAGCTACCCGATG
|
|
estrain@4
|
44 GTGTAAAAATTGAAGAAAGAGGTGTGTAAAATGCAAAATAAAAAAATAGCAGTTATTTTTGGAGGCAATT
|
|
estrain@4
|
45 CAACAGAGTACGAGGTGTCATTGCAATCGGCATCCGCTGTTTTTGAAAATATCAATACCAATAAATTTGA
|
|
estrain@4
|
46 CATAATTCCAATAGGAATTACAAGAAGTGGTGAATGGTATCACTATACGGGAGAAAAGGAGAAAATCCTA
|
|
estrain@4
|
47 AACAATACTTGGTTTGAAGATAGCAAAAATCTATGCCCTGTTGTCGTTTCCCAAAATCGTTCCGTTAAAG
|
|
estrain@4
|
48 GCTTTTTAGAAATTGCTTCAGACAAATACCGTATTATAAAAGTTGATTTGGTATTCCCCGTATTGCATGG
|
|
estrain@4
|
49 CAAAAACGGCGAAAATGGGACTTTGCAGGGCATATTTGAATTGGCAGGAATACCTGTTGTTGGCTGCGAT
|
|
estrain@4
|
50 ACACTCTCATCAGCTCTTTGTATGGATAAGGACAGGGCACATAAACTCGTTAGCCTTGCGGGTATATCTG
|
|
estrain@4
|
51 TTCCTAAATCGGTAACATTCAAACGCTTTAACGAAGAAGCAGCGATGAAAGAGATTGAAGCGAATTTAAC
|
|
estrain@4
|
52 TTATCCGCTGTTTATTAAACCTGTTCGTGCAGGCTCTTCCTTTGGAATAACAAAAGTAATTGAAAAGCAA
|
|
estrain@4
|
53 GAGCTTGATGCTGCCATAGAGTTGGCATTTGAACACGATACAGAAGTCATCGTTGAAGAAACAATAAACG
|
|
estrain@4
|
54 GCTTTGAAGTCGGTTGTGCCGTACTTGGCATAGATGAGCTCATTGTTGGCAGAGTTGATGAAATCGAACT
|
|
estrain@4
|
55 GTCAAGCGGCTTTTTTGATTATACAGAGAAATATACGCTTAAATCTTCAAAGATATATATGCCTGCAAGG
|
|
estrain@4
|
56 ATTGATGCCGAAGCAGAAAAACGGATACAAGAAGCGGCTGTAACCATATATAAAGCTCTGGGCTGTTCGG
|
|
estrain@4
|
57 GTTTTTCCAGAGTGGATATGTTTTATACACCGTCTGGCGAAATTGTATTTAATGAGGTAAACACAATACC
|
|
estrain@4
|
58 AGGCTTTACCTCGCACAGTCGCTATCCAAATATGATGAAAGGCATTGGTCTATCGTTCTCCCAAATGTTG
|
|
estrain@4
|
59 GATAAGCTGATAGGTCTGTATGTGGAATGATGAAAACGATTGAGCTTGAAAAGGAAGAAATTTATTGTGG
|
|
estrain@4
|
60 AAATTTGCTGCTCGTCAACAAAAATTATCCGCTACGAGATAACAATGTAAAGGGTTTAGT
|
|
estrain@4
|
61
|
|
estrain@4
|
62 >contig06 gyrA:T86I
|
|
estrain@4
|
63 TCAAAACTTTGAACTAATAGAAGGATTTTTATGGAGAATATTTTTAGCAAAGATTCTGAT
|
|
estrain@4
|
64 ATTGAACTTGTAGATATAGAAAATTCTATAAAAGGTAGTTACTTAGACTATTCTATGAGT
|
|
estrain@4
|
65 GTTATTATAGGTCGTGCTTTGCCTGACGCAAGAGATGGTTTAAAGCCTGTTCATAGAAGA
|
|
estrain@4
|
66 ATTTTATATGCTATGCAAAATGATGAGGCAAAAAGTAGAACAGATTTTGTCAAATCAGCC
|
|
estrain@4
|
67 CGTATAGTGGGTGCTGTTATAGGTCGTTATCATCCACATGGAGATATAGCAGTTTATGAT
|
|
estrain@4
|
68 GCTTTGGTTAGAATGGCTCAAGATTTTTCTATGAGATATCCAAGTATTACAGGACAAGGC
|
|
estrain@4
|
69 AACTTTGGATCTATAGATGGTGATAGCGCTGCTGCGATGCGTTATACTGAAGCAAAAATG
|
|
estrain@4
|
70 AGTAAACTTTCTCATGAGCTTTTAAAAGATATAGATAAAGATACGGTCGATTTTGTTCCA
|
|
estrain@4
|
71 AATTATGATGGTTCAGAAAGTGAACCTGATGTCTTACCTTCTAGGGTTCCAAATTTATTA
|
|
estrain@4
|
72 TTAAATGGTTCAAGTGGTATAGCTGTAGGTATGGCGACAAACATCCCACCTCATAGTTTA
|
|
estrain@4
|
73 AATGAGTTGATAGATGGACTTTTATATTTGCTTGATAGTAAAGATGCAAGCTTAGAAGAG
|
|
estrain@4
|
74 ATTATGCAGTTTATCAAAGGTCCAGATTTTCCAACAGGTGGAATAATTTATGGTAAAAAA
|
|
estrain@4
|
75 GGTATTATAGAAGCTTATCGCACAGGGCGTGGTCGCGTGAAAGTGCGCGCTAAAACTCAT
|
|
estrain@4
|
76 ATTGAAAAAAAGACAAATAAAGATGTTATTGTTATAGATGAGCTTCCTTATCAAACCAAT
|
|
estrain@4
|
77 AAAGCTAGGCTTATAGAACAGATTGCAGAGCTTGTTAAAGAAAAGCAAATTGAAGGAATA
|
|
estrain@4
|
78 TCTGAAGTAAGAGATGAGAGCAATAAAGAAGGAATCCGCGTTGTTATAGAGCTTAAACGT
|
|
estrain@4
|
79 GAGGCTATGAGTGAAATTGTTTTAAACAATCTATTTAAATCTACTACTATGGAAAGTACT
|
|
estrain@4
|
80 TTTGGTGTGATTATGTTGGCAATTCACAATAAAGAACCTAAAATTTTCTCTTTGTTAGAA
|
|
estrain@4
|
81 CTTTTAAATCTTTTCTTAACCCATAGAAAAACAGTTATTATTAGAAGAACGATTTTTGAA
|
|
estrain@4
|
82 CTTCAAAAGGCAAGAGCAAGAGCTCATATTTTAGAAGGTCTTAAAATTGCACTTGATAAT
|
|
estrain@4
|
83 ATAGATGAAGTGATTGCTTTAATTAAAAATAGTTCTGATAATAATACCGCAAGAGATTCT
|
|
estrain@4
|
84 TTGGTAGCTAAATTTGGTCTTAGTGAGCTTCAAGCCAATGCTATTTTAGATATGAAACTT
|
|
estrain@4
|
85 GGTCGTTTAACAGGACTTGAAAGAGAAAAAATCGAAAATGAACTTGCAGAATTAATGAAA
|
|
estrain@4
|
86 GAAATTGCAAGACTTGAAGAAATTTTAAAAAGTGAAACCTTGCTTGAAAATTTAATTCGC
|
|
estrain@4
|
87 GATGAATTAAAAGAAATTAGAAGTAAATTTGATGTGCCACGTATTACTCAAATTGAAGAT
|
|
estrain@4
|
88 GATTATGATGATATTGATATTGAAGATTTGATTCCTAATGAAAATATGGTTGTAACTATT
|
|
estrain@4
|
89 ACGCATCGTGGTTATATTAAGCGTGTGCCTAGTAAACAATATGAAAAGCAAAAACGAGGC
|
|
estrain@4
|
90 GGAAAAGGAAAATTAGCCGTTACGACTTATGATGATGATTTTATAGAAAGTTTCTTTACG
|
|
estrain@4
|
91 GCAAATACACATGATACACTTATGTTTGTAACAGATCGTGGACAGCTTTATTGGCTTAAA
|
|
estrain@4
|
92 GTTTATAAAATTCCTGAAGGCTCAAGAACGGCTAAAGGAAAAGCAGTGGTAAATCTTATT
|
|
estrain@4
|
93 AATTTACAAGCTGAAGAAAAAATCATGGCTATTATTCCAACCACGGATTTTGATGAGAGT
|
|
estrain@4
|
94 AAATCTTTATGTTTCTTTACTAAAAATGGTATTGTAAAGCGTACAAATTTGAGTGAATAT
|
|
estrain@4
|
95 CAAAATATCAGAAGTGTAGGAGTTAGAGCGATCAACTTGGATGAAAATGATGAGTTGGTA
|
|
estrain@4
|
96 ACTGCTATTATTGTTCAAAGAGATGAAGATGAAATTTTTGCCACTGGTGGTGAAGAAAAT
|
|
estrain@4
|
97 TTAGAAAATCAAGAAATTGAAAATTTAGATGATGAAAATCTTGAAAATGAAGAAAGTGTA
|
|
estrain@4
|
98 AGCACACAAGGTAAAATGCTCTTTGCAGTAACCAAAAAAGGTATGTGTATCAAATTCCCA
|
|
estrain@4
|
99 CTTGCTAAAGTGCGTGAAATCGGCCGTGTAAGTCGTGGGGTGACGGCTATTAAGTTTAAA
|
|
estrain@4
|
100 GAGAAAAATGACGAATTAGTAGGTGCAGTTGTTATAGAAAATGATGAGCAAGAAATTTTA
|
|
estrain@4
|
101 AGCATAAGTGCAAAAGGTATAGGAAAACGCACAAATGCTGGAGAATATAGATTGCAAAGC
|
|
estrain@4
|
102 AGAGGTGGTAAGGGTGTAATTTGTATGAAACTTACAGAAAAAACCAAAGATCTTATTAGC
|
|
estrain@4
|
103 GTAGTTATAGTAGATGAAACTATGGATTTGATGGCTCTTACAAGTTCAGGCAAGATGATA
|
|
estrain@4
|
104 CGTGTTGATATGCAAAGCATTAGAAAAGCAGGGCGTAATACGAGTGGTGTCATTGTAGTT
|
|
estrain@4
|
105 AATGTGGAAAATGACGAGGTGGTTAGCATCGCTAAGTGTCCTAAAGAGGAAAATGATGAG
|
|
estrain@4
|
106 GATGAGTTAAGCGATGAAAACTTTGGTTTAGATTTGTAATAAGTTTAAA
|
|
estrain@4
|
107 AGGGCATAAAGGCTCTGTGCAAAAGAAAATTGGTAAGTAAGGGATAAGATATGAGTAAAG
|
|
estrain@4
|
108 CATTAATTAAATTCATAAGATTATCTTCAACTAAAGCAAGATTGATTGCTAGAGAAGTTC
|
|
estrain@4
|
109 AGGGGATGAATGCAGAATTAGCTATGGCTAGTTTAAAATTTATGCCAAATAAAGGTGCAA
|
|
estrain@4
|
110 AATATATCGCAAATGCAATTTCAAGTGCAGTAGCAAATGGTGGCTTTGAAGCAAACGAAG
|
|
estrain@4
|
111 TGATTGTAAAAAGTTGTCGTGTTGACGCAGCTGCGGTATTAAAAAGATTTAGACCAAGAG
|
|
estrain@4
|
112 CTAGAGGAAGTGCAAGTCGTATTAGAAAACCAACTTCACATATTTTAGTAGAAGTGGTAA
|
|
estrain@4
|
113 AAGCGGAAGTGAAAGCTGAAGAGAAAAAAACAGTAGCTAAAAAAACTACTACAACAAAAG
|
|
estrain@4
|
114 CTCCAGCTAAAAAAACAACAAGCACTAAAAAAGCAACAGCGAAAAAGGAAAGCTAATGGG
|
|
estrain@4
|
115 ACAAAAAGTTAATCCAATTGGTCTAAGACTAGGAATCAATAGAAAC
|
|
estrain@4
|
116
|
|
estrain@4
|
117
|
|
estrain@4
|
118 >contig05 Campylobacter 23S:A2075G
|
|
estrain@4
|
119 TAAGAGCAAGTTCTAATACAAACTCTACTTGAAAGATTTCTATTAAACTCTAAATATTAT
|
|
estrain@4
|
120 CTATATTCAAAGTCTTCTTAAAAACCTTAACAAGGAAGTGATGCTTTATTAAAGATAAGC
|
|
estrain@4
|
121 CAAACGCTCTATTAGTACTGGTCAGCTAAAGGACTTTCATCCATTACACACCCAGCCTAT
|
|
estrain@4
|
122 CAAACTAGTAGTCTTCTAGAGAGCTTAGAGAAGATTCATCTTAGAGTTGGCTTCACGCTT
|
|
estrain@4
|
123 AGATGCTTTCAGCGTTTATCCTTTCCAAACTTAGCTACGCTGCGATGCTCTTGGCAGAAC
|
|
estrain@4
|
124 AACAGCTACACCAGTGGTTTGTTCAACCCGGTCCTCTCGTACTAGGGTCAAATCTCTTCA
|
|
estrain@4
|
125 ATCTTCTTACGCCCACGGCAGATAGGGACCGAACTGTCTCACGACGTTCTGAACCCAGCT
|
|
estrain@4
|
126 CGCGTACCGCTTTAAATGGCGAACAGCCATACCCTTGGGACCTGCTCCAGCCCCAGGATG
|
|
estrain@4
|
127 CGATGAGCCGACATCGAGGTGCCAAACCTCCCCGTCGATGTGAGCTCTTGGGGGAGATCA
|
|
estrain@4
|
128 GCCTGTTATCCCCGGGGTACCTTTTATCCTTTGAGCGATGGCCCTTCCACACAGAACCAC
|
|
estrain@4
|
129 CGGATCACTAAGACCGACTTTCGTCTCTGCTTGACTTGTATGTCTTGCAGTTAAGCTGGC
|
|
estrain@4
|
130 TTATACCTTTATACTCTACGAACGATTTCCAACCGTTCTGAGCCAACCTTTGTAAGCCTC
|
|
estrain@4
|
131 CGTTATTATTTGGGAGGCGACCGCCCCAGTCAAACTACCCACCAGACATTGTCCCACTTG
|
|
estrain@4
|
132 AGGATAACTCAAGCTGGTTAGCTACCCAAATAAGAAAGAGTGGTATCTCAACAATGGCTC
|
|
estrain@4
|
133 ATATACAACTGGCGTCATATACTCAAAGCCTCCCACCTATCCTGCACATTCTTATCCAAA
|
|
estrain@4
|
134 TAGCAGTGTCAAGCTGTAGTAAAGGTCCACGGGGTCTCTCCGTCTTGCCGCGGGTAGGAG
|
|
estrain@4
|
135 GAATTTTCACCTCCACTACAATTTCACTGGATCCCTCTTTGAGACAGCTCCCATCTCGTT
|
|
estrain@4
|
136 ACGCCATTCATGCAGGTCGGTATTTAACCGACAAGGAATTTCGCTACCTTAGGACCGTTA
|
|
estrain@4
|
137 TAGTTACGGCCGCCGTTTACTCGGGCTTCGATCAAGAGCTTCGCTAATGCTAACCCCATC
|
|
estrain@4
|
138 AATTAACCTTCGAGCACCGGGCAGGCGTCACACCCTATACATCCTCTTACGAGTTAGCAG
|
|
estrain@4
|
139 AGTGCTGTGTTTTTGGTAAACAGTCGGGAGGGACTCTTTGTTGTAAGTTTCTTCGCTTTC
|
|
estrain@4
|
140 GGAGTAAATCCTAATACGAAGCGAACCACACCTTATACCGAAGATACGGTGCTATTTTGC
|
|
estrain@4
|
141 AGAGTTCCTTAAAGAGAGTTCTTCCACGCGCCTTAGAATACTCATCCCACCCACCTGTGT
|
|
estrain@4
|
142 CGGTTTACGGTACGGGCAACATTAGCTAAACTTAGAAACTTTTCTTGGCTCGATGGCATC
|
|
estrain@4
|
143 AGGGGTTCTTCTATCCATCCGAAGACTTCAAAAAGCCTTTCAGTTCTCGGAGTATTGTTA
|
|
estrain@4
|
144 TACGGATTTGCCTGTATAACCTCCTACGACCTTAGACTAGCACTTCCATCCGCTAGCCCC
|
|
estrain@4
|
145 CTTAGCCCTAAGCGTCCTTCCATCGCACACTAATGTTGGTATTGGAATATTAACCAATTT
|
|
estrain@4
|
146 GCCATCGTCTACCCCTTTCGGACTCGACTTAGGACCCGACTAACCCTACGATGACGAGCA
|
|
estrain@4
|
147 TCGCGTAGGAAACCTTGGGTTTACGGCGTTAATGATTCTCACATTAATTATCGCTACTCA
|
|
estrain@4
|
148 TGCCTGCATGCTCACTTCTATTCGCTCCAGCACTCCTTACCGGTATACCTTCGACGCAAA
|
|
estrain@4
|
149 TAGAACGCTCTCCTACCACTTGCACACAACTTAAACTACTTAACTTTAGTCTAAGAATAT
|
|
estrain@4
|
150 TTTTACTGATTTTACTAAGTTTTATTTCTATCTTTACTCTATAAAAATCAGTAAAAATAT
|
|
estrain@4
|
151 AACTAAACATATAACTTAGTTTCTCATATTCTAAACTTAAATAATCTAAGTTGTGCGCAA
|
|
estrain@4
|
152 GTCTACAGCTTCGGTACTTACTTTAGCCCCGTTATATTTTC
|
|
estrain@4
|
153
|
|
estrain@4
|
154 >contig07 Campylobacter 50S_L22:A103V NZ_CUUA01000002.1 Campylobacter jejuni strain OXC6585, whole genome shotgun sequence 59884-60509
|
|
estrain@4
|
155 AATCACATCGGTTATAAGCTTGGTGAATTTGCTCCAACACGCACATTTAAAGGGCATAAA
|
|
estrain@4
|
156 GGCTCTGTGCAAAAGAAAATTGGTAAGTAAGGGATAAGATATGAGTAAAGCATTAATTAA
|
|
estrain@4
|
157 ATTCATAAGATTATCTTCAACTAAAGCAAGATTGATTGCTAGAGAAGTTCAGGGGATGAA
|
|
estrain@4
|
158 TGCAGAATTAGCTATGGCTAGTTTAAAATTTATGCCAAATAAAGGTGCAAAATATATCGC
|
|
estrain@4
|
159 AAATGCAATTTCAAGTGCAGTAGCAAATGGTGGCTTTGAAGCAAACGAAGTGATTGTAAA
|
|
estrain@4
|
160 AAGTTGTCGTGTTGACGCAGCTGCGGTATTAAAAAGATTTAGACCAAGAGCTAGAGGAAG
|
|
estrain@4
|
161 TGCAAGTCGTATTAGAAAACCAACTTCACATATTTTAGTAGAAGTGGTAAAAGCGGAAGT
|
|
estrain@4
|
162 GAAAGCTGAAGAGAAAAAAACAGTAGCTAAAAAAACTACTACAACAAAAGCTCCAGCTAA
|
|
estrain@4
|
163 AAAAACAACAAGCACTAAAAAAGCAACAGCGAAAAAGGAAAGCTAATGGGACAAAAAGTT
|
|
estrain@4
|
164 AATCCAATTGGTCTAAGACTAGGAATCAATAGAAACTGGGAATCAAGATGGTTTCCAACT
|
|
estrain@4
|
165 AAAGCAAATTTAGTAGAAAATATCGG
|
|
estrain@4
|
166
|
|
estrain@4
|
167 >contigX nimIJ_hmm NZ_JHXM01000017.1:91300-91800 Prevotella brevis ATCC 19188 T433DRAFT_scaffold00015.15_C, whole genome shotgun sequence
|
|
estrain@4
|
168 CTAATTACCACCGCGCTGCCTTACCAACTCAATAGCCTCTTTACCTGTCAGGTGCTCAATGTCCATACGG
|
|
estrain@4
|
169 ATGGCCAGCATATGTGCAAGGCCGCTTTCCAGTTCTTTCTGCAAGGCGTCGTCATGGTTGGGATTAAAGC
|
|
estrain@4
|
170 GATTACCCATCATATGCATGATGGTTCGTTTCTCGGCTTCATCCTCTACAATTTCAATTCTGCCAAAGGC
|
|
estrain@4
|
171 TATCACACTACGAAAGTAGGTGGTGTACTTCTCTGGTCTCACATCGTCCTTTTCTATAACACAAAAAGAG
|
|
estrain@4
|
172 GCTTTGTTGCATCTGCGGATGGCATCCACTTTATGGCCAGCCATAGCACTGTGGAAGTATAGTTTGCCGT
|
|
estrain@4
|
173 TGTCATAGACATAGCTGATGGGCACGGCATAGGGATAGTCATTATCGCCCAACAAGGCTAATGTGCCAGA
|
|
estrain@4
|
174 AGTAGCCTTCTGCAGAACGGCGATGCTGTCTGCGTCAGTCAGTTGCTGACGCTTTCGTCTCATTTCTCGG
|
|
estrain@4
|
175 AACTCACTCAT
|
|
estrain@4
|
176
|
|
estrain@4
|
177 >contig08 Partial DNA only blaTEM-156
|
|
estrain@4
|
178 AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTCATGATACAATAACCCTGATAA
|
|
estrain@4
|
179 ATGCTTCAATAATATTGAAAAAGGAAGAGTATGAGTATTCAACATTTCCGTGTCGCCCTTATTCCCTTTT
|
|
estrain@4
|
180 TTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCA
|
|
estrain@4
|
181 GTTGGGTGCACGAGTGGGTTACATCGAACTGGATCTCAACAGCGGTAAGATCCTTGAGAGTTTTCGCCCC
|
|
estrain@4
|
182 GAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCCCGTGTTGACG
|
|
estrain@4
|
183 CCGGGCAAGAGCAACTCGGTCGCCGCATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCAC
|
|
estrain@4
|
184 AGAAAAGCATCTTACGGATGGCATGACAGTAAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
|
|
estrain@4
|
185 ACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTTTTTGCACAACATAG
|
|
estrain@4
|
186 GGGATCATGTAACTCGCCTTGATCGTTGGGAACCGGAGCTGAATGAAGCCATACCAAACGACGAGCGTGA
|
|
estrain@4
|
187 CACCACGATGCCTGCAGCAATGGCAACAACGTTGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
|
|
estrain@4
|
188
|
|
estrain@4
|
189 >contig09 >case4_case6_sul2_aph3pp-Ib Providencia rettgeri strain Pret_2032, whole genome shotgun sequence 2160922-2162737 150-1527 (reverse comp'd)
|
|
estrain@4
|
190 CAAATCGGCATAGCGATCTGCTGTTCCGAGCCGCCCAAGGTCGATCAGACCCGTGCATTGAAGAGTTTTA
|
|
estrain@4
|
191 GGGTCCACCATGAAGTTCGGCATGCAGGGATCACCATGGCAAACAACCATATCGGTGCGCTCTTGGTCGA
|
|
estrain@4
|
192 GCCGCACCGGTAGCTCTCGTTCGACACGAGCCAAAAGATCGAGCTGCGGCGTACTCTTGTCCTCGTCCGG
|
|
estrain@4
|
193 TAAGAAGTCGGGATTGACGGCATTGCGGGACACCACATCAACGGCGCGTCCGAACATTCGCGACAGCCTG
|
|
estrain@4
|
194 CGCTCAAACGGACATTGATCAACCGATAGGCTGTGAACAGCGCCAAGTTGCTGCCCCATTGACGGCCACG
|
|
estrain@4
|
195 CTTTGAGCAAATCCGCTCCAGACAGATCAGCCGCCGGTACTCCCGGAATTGCCGTTATCACCAAGCATGC
|
|
estrain@4
|
196 ACCCTCCTGTTCCTCCTGCCAGTTGATGACCTCGGGGCAAGCCACACCTCGACCTTTGAGCCAAATGAGG
|
|
estrain@4
|
197 CGGTCACGCTCTCCAGCGAGCTCACCGCGGCGGGAAGCAGGTGCGATTTTCGCGAAGGCATGCCCGTCAC
|
|
estrain@4
|
198 CACGTCGAAAAACAAAATCACCAGATTCTCCGCCTCTGACAGGCAACCAGTCAGAATGCGATTCACCAAA
|
|
estrain@4
|
199 AAAAATATTAGTTCGATTCAATGGAGGTTCCTTCAGTTTTCTGATGAAGCGCGAATATAGAGAAATATCC
|
|
estrain@4
|
200 CGAATGTGCAGTTAACGAATTCTTGCGGTTTCTTTTAGCGCCGCCAATACCGCCAGCCCGTCGCGCAAGG
|
|
estrain@4
|
201 GGCGCGGCTCGTGTGTGCGGATGAAGTCAGCTCCACCTGCGGCGGCGGCAAGCTCTGCAGCGAGTGTCGC
|
|
estrain@4
|
202 GGCCCCGACATCCCCCGGACCACGGCCTGTGAGCGCGCGCAGAAAGGATTTGCGCGAAACAGACAGAAGC
|
|
estrain@4
|
203 ACCGGCAAATCGAAGCGCAGCCGCAATTCATCGAACCGCGCCAGCACCGAGAGCGAGGTTTCGGGAGCAG
|
|
estrain@4
|
204 CCCCCAGAAAAAACCCCATGCCGGGATCAAGGACAAGGCGGTTGCGTTTGATACCGGCACCCGTCAGCGC
|
|
estrain@4
|
205 CGCGATGCGCGCGTCAAAGAACGCCGCAATGTGATCCATGATGTCGCCAGCGGGTGCCTCGCGCCGATCT
|
|
estrain@4
|
206 GCCTGCCCGTCTTGCACCGAATGCATAACGACGAGTTTGGCAGATGATTTCGCCAATTGCGGATAGAACG
|
|
estrain@4
|
207 CAGCGTCTGGAAAACCGCGAATATCATTGAGATAGGCCACACCACGCGACAAGGCATAGGCTTGCGTCGC
|
|
estrain@4
|
208 GGGTTGATAACTGTCGAGCGAGACGGGAATGCCATCTGCCTTGAGCGCGTCCAGCACCGGCGCGATACGC
|
|
estrain@4
|
209 TCGATTTCTGTGTCGGACGAAACAGGCGCGGCGTCGGGGTTGCTGGAT
|
|
estrain@4
|
210
|
|
estrain@4
|
211 >contig10 blaOXA_internal_stop >NZ_CP008798.1 Klebsiella pneumoniae subsp. pneumoniae KPNIH24 plasmid pKPC-484, complete sequence 44200-45800
|
|
estrain@4
|
212 TTGCTCTGCTCAAACGCGAAGGCCGGTGCCCGTCTGACGTTGAACACCGACAGATTAAGT
|
|
estrain@4
|
213 ACCGGAACAACGTGATTGAATGCGATCATGGCAAACTGAAACGGATAATCGGCGCCACGC
|
|
estrain@4
|
214 TGGGATTTAAATCCATGAAGACGGCTTACGCCACCATCAAAGGTATTGAGGTGATGCGTG
|
|
estrain@4
|
215 CACTACGCAAAGGCCAGGCCTCAGCATTTTATTATGGTGATCCCCTGGGCGAAATGCGCC
|
|
estrain@4
|
216 TGGTAAGCAGAGTTTTTGAAATGTAAGGCCTTTGAATAAGACAAAAGGCTGCCTCATCGC
|
|
estrain@4
|
217 TAACTTTGCAACAGTGCCAGGCAGGCTTATCTTGGACAAGAAGATCGCTTGGCCTCGCGC
|
|
estrain@4
|
218 GCAGATCAGTTGGAAGAATTTGTTCACTACGTGAAAGGCGAGATCACCAAGGTAGTCGGC
|
|
estrain@4
|
219 AAATAATGTCTAAAACAAAGTTATGCACCTATTAAGCGCACAGCGGAGCAATGAAGGATA
|
|
estrain@4
|
220 CCTTGATGAAAAAAATTTTGCTGCTGCATATGTTGGTGTTCGTTTCCGCCACTCTCCCAA
|
|
estrain@4
|
221 TCAGTTCCGTGGCTTCTGATGAGGTTGAAACGCTTAAATGCACCATCATCGCAGACGCCA
|
|
estrain@4
|
222 TTACCGGAAATACCTTATATGAGACCGGAGAATGTGCCCGTCGTGTGTCTCCGTGCTCGT
|
|
estrain@4
|
223 CTTTTAAACTTCCATTGGCAATCATGGGGTTTGATAGTGGAATCTTGCAGTCGCCAAAAT
|
|
estrain@4
|
224 CACCTACGTGGGAATTGAAGCCGGAATACAACCCGTCTCCGAGAGATCGCACATACAAAC
|
|
estrain@4
|
225 AAGTCTATCCGGCGCTATGGCAAAGCGACTCTGTTGTCTAGTTCTCGCAGCAATTAACAA
|
|
estrain@4
|
226 GCCGTCTGGGAGTTGATCGGTTCACGGAATACGTAAAGAAATTTGAGTACGGTAATCAAG
|
|
estrain@4
|
227 ATGTTTCCGGTGACTCGGGGAAGCATAACGGCTTGACCCAGTCATGGCTGATGTCGTCGC
|
|
estrain@4
|
228 TCACCATATCTCCCAAGGAGCAAATTCAGTTTCTTCTACGCTTTGTCGCGCATAAGCTGC
|
|
estrain@4
|
229 CTGTATCCGAAGCGGCTTATGACATGGCGTATGCCACAATCCCGCAGTACCAGGCAGCCG
|
|
estrain@4
|
230 AAGGATGGGCTGTACATGGAAAAAGCGGCAGCGGCTGGCTTCGGGACAATAACGGCAAGA
|
|
estrain@4
|
231 TAAATGAAAGTCGTCCGCAGGGCTGGTTCGTGGGCTGGGCTGAAAAAAACGGACGGCAAG
|
|
estrain@4
|
232 TTGTTTTCGCCCGATTGGAAATAGGAAAGGAAAAGTCCGATATTCCCGGCGGGTCTAAAG
|
|
estrain@4
|
233 CACGAGAGGATATTCTCGTGGAATTACCCGTGTTGATGGGTAACAAATGATATGTGGCGT
|
|
estrain@4
|
234 CATCGAGAGCAGATGCATAACCCTGCGCTCGAGCGGACCTCGCGCATAAAGCCGCGCGAG
|
|
estrain@4
|
235 TCCGCTCACCTTGAACGTTAGATGCACTAAGCACATAATTGCTCACAGCCAAACTATCAG
|
|
estrain@4
|
236 GTCAAGTCTGCTTTTATTATTTTTAAGCGTGCATAATAAGCCCTACACAAATTGGGAGAT
|
|
estrain@4
|
237 ATATCATGAAAAGAGTTTGATGCTCAGGGTGTAGCGGTTCGGTTTATTGACGACGGGATC
|
|
estrain@4
|
238 AGTACCGACGGTGATATGGGGCAAATGGTGGTCACCATCCT
|
|
estrain@4
|
239
|
|
estrain@4
|
240 >contig11 blaTEM divergent, with internal stop codon
|
|
estrain@4
|
241 AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTTAAGATACAATAACCCTAATAA
|
|
estrain@4
|
242 ATGCTTCAATAATATTGAAAAAGGAAGAGTATAAGTATTTAACATTTCCGTGTCGCCCTTATTCCCTTTT
|
|
estrain@4
|
243 TTGCGGCATTTTGCCTTCCTGTTTTTGCTCACCCAGAAACGCTGGTGAAAGTAAAAGATGCTGAAGATCA
|
|
estrain@4
|
244 GTTGGGTGCACGAGTGAATTACATCGAACTGGATCTCAACAGTGGTAAGATCCTTGAGAGTTTTCGCCCC
|
|
estrain@4
|
245 GAAGAACGTTTTCCAATGATGAGCACTTTTAAAGTTCTGCTATGTGGCGCGGTATTATCTTGTGTTGACG
|
|
estrain@4
|
246 CCGGGCAAGAGCAACTCGGTCGCAGTATACACTATTCTCAGAATGACTTGGTTGAGTACTCACCAGTCAC
|
|
estrain@4
|
247 AGAAAAGCATCTTACGGATGGCATGACACTTAGAGAATTATGCAGTGCTGCCATAACCATGAGTGATAAC
|
|
estrain@4
|
248 ACTGCGGCCAACTTACTTCTGACAACGATCGGAGGACCGAAGGAGCTAACCGCTTAATTGCACAACATAG
|
|
estrain@4
|
249 GGGATCATGTAACTCGCCTTGATCGTCCGGAACCGGAGCTGTATGAAGTTATACCAAACGACGAGCGTGA
|
|
estrain@4
|
250 CACCACGATGCCTGCAGCAATAACAACAACGAAGCGCAAACTATTAACTGGCGAACTACTTACTCTAGCT
|
|
estrain@4
|
251 TCCCGGCAACAATTAATAGACTGGATGGAGGCGGATAAAGTTGTAGGATTATTTCTGCGCTCGGCCCTTC
|
|
estrain@4
|
252 CGGCTGGCTGGTTTATTGCTGATAAATCTGGAGGGGGTGAGCGTGGGTCTCACGGTATCATTGCAGCACT
|
|
estrain@4
|
253 GGGGCCAGATGGTAAGCCCTCCCGTATCGTAGTTATCTATACGACGAGGAGTCAGGCAATTATGGATGAA
|
|
estrain@4
|
254 CGAAATAGACAGATCGCTGAGATAGGTGCCTCATTGATTAGGCATTGGTAACTGTCAGACCAAGTTTACT
|
|
estrain@4
|
255 CATA
|
|
estrain@4
|
256
|
|
estrain@4
|
257 >contig12 qacR test for blast rule NBR007712 300492196 21742-21176 plus 70 upstream and downstream
|
|
estrain@4
|
258 AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTTAAGATACAATAACCCTAATAA
|
|
estrain@4
|
259 atgaaAttgaaagataaaatactaggtgtcgcaaaggaattatttataaaaaatggatataatgccactactactggaga
|
|
estrain@4
|
260 aattgttaaattatcagaaagtagtaaagggaatctttattatcactttaaaacaaaagaaaatctatttttagaaattt
|
|
estrain@4
|
261 taaatatagaagaatctaaatggcaagaacagtggaaaaaggaacaaatcaaatgtaaaactaatagagaaaaattttat
|
|
estrain@4
|
262 ttatataatgaactatctttaacaaccgaatactattatccacttcaaaacgcaataattgaattttacactgaatatta
|
|
estrain@4
|
263 taaaactaatagcattaatgaaaaaatgaataaattagaaaacaaatatatagatgcttatcatgtaatttttaaggagg
|
|
estrain@4
|
264 gtaatttaaatggcgaatggtgtattaatgatgttaatgctgttagtaaaatagcagcaaacgctgttaatggaattgtt
|
|
estrain@4
|
265 acctttacacatgaacaaaatattaatgaaagaattaaacttatgaacaagttctctcaaatttttttaaatggacttag
|
|
estrain@4
|
266 taaataa
|
|
estrain@4
|
267 AACCCCTATTTGTTTATTTTTCTAAATACATTCAAATATGTATCCGCTTAAGATACAATAACCCTAATAA
|
|
estrain@4
|
268
|
|
estrain@4
|
269 >contig13 arsR-suppressed-in-escherichia and emrD3-suppressed-in-vibrio 1 NG_065418(1-268)
|
|
estrain@4
|
270 atgaagacgaagccttctctctggttgatggtgattatgttgatgtttccacaaatcgtcgaaaccatctatagcccggtgttgggctctattgcgcggtcattttcggtgagtgatgcccaagccgctcaaaccttgtcggtctattttttggcttttgcattgggagtggtgatatggggagtactcgcggataaatgggggcgtcggcctactatgttggtgggcctactgatttacgggagcgctacatttatcgcaatgcagacagacagtttcactatcttgatgttagcacgagtattcagcgcctttggtatcgctgtcggttccgtggtaacgcaaactattttacgcgatgtgttcagtggtcatgaactgagaaaagtttttagtttaatggggataggtatatctataagcccagtgctagggatgttgcttggtgggcagttagcgtttgcaggtgggcatcaattagtttttctggcgctattttttatagctctggtgctgttcgtttataacttgtgtcagcttcccgaaacgcaacaggtcaagccgaagatcgcattgggttgtttagtggctcgaatgtttaaagatagacaagtgctgctttcagcactgctagtggcgttatacaacgtggccttattttcttattaccagcttggtgcctttatctttagcgatttggggttagatgcggaacagtttggctatagtggtattgcacttggcctcggtagcttaatcgggagctttcttaacaaaacgttgcttgctaaacaggtgccacagcgtgcgctgcttttactggcagcactgttattaatcatgggaactataggcgtatctttgacgcttgattcgatcggttttgtggccgcaatgatattggttgtgatcgcttatggtatggcgattccgaatatcttgagcactgcactggtggagtataaatcgcaagcagggagtgctggagcgctgtttggcctgctctattatcttttgattggtagtggtttggcgctcacgggtttagtacaacgtttaggtgtcgtgcttctgatgtgcgctggtatcaccttgttggcaaccttagctcgctctagtcacatagcccgtctaccatga
|
|
estrain@4
|
271 atgtcatttctgttacccatccaattgttcaaaattcttgctgatgaaacccgtctgggcatcgttttactgctcagcga
|
|
estrain@4
|
272 actgggagagttatgcgtctgcgatctctgcactgctctcgaccagtcgcagcccaagatctcccgccacctggcattgc
|
|
estrain@4
|
273 tgcgtgaaagcgggctattgctggaccgcaagcaaggtaagtgggttcattaccgcttatcaccgcatattccagcatgg
|
|
estrain@4
|
274 gcggcgaaaattattgatgaggcctggcgatgtgaacaggaaaaggttcaggcgattgtccgcaacctggctcgacaaaa
|
|
estrain@4
|
275 ctgttccggggacagtaagaacatttgcagttaa
|
|
estrain@4
|
276
|
|
estrain@4
|
277
|
|
estrain@4
|
278 >contig14 pmrB_C84R twice, then pmrB wildtype >NC_000913.3:c4333272-4332181 Escherichia coli str. K-12 substr. MG1655, complete genome
|
|
estrain@4
|
279 ATGCATTTTCTGCGCCGACCAATATCGCTGCGCCAACGGCTGATATTGACCATCGGGGCCATTTTGTTGGTGTTTGAGCTGATCAGCGTCTTCTGGCTATGGCATGAAAGTACCGAGCAGATTCAGCTGTTTGAGCAGGCGCTACGCGACAATCGCAACAACGATCGCCACATCATGCGTGAGATCCGCGAGGCGGTCGCCAGCCTGATTGTCCCCGGCGTCTTTATGGTCAGCCTGACGCTATTTATCCGCTATCAGGCGGTACGCCGCATCACCCGCCCGCTGGCGGAGCTGCAAAAAGAGCTGGAAGCGCGCACCGCCGACAACTTAACGCCCATTGCCATTCACAGCGCCACCCTCGAAATCGAAGCGGTGGTTTCGGCGTTAAACGATCTGGTCAGTCGCCTGACCAGCACGCTGGATAACGAAAGGTTGTTTACCGCTGACGTCGCGCACGAACTGCGAACGCCACTGGCGGGGGTGCGTTTGCATCTGGAACTGCTGGCGAAAACGCATCACATTGATGTAGCACCGTTAGTGGCACGGCTTGATCAGATGATGGAGAGCGTCTCCCAGCTGCTGCAACTGGCGCGTGCCGGACAGTCATTTTCTTCCGGTAATTATCAACATGTAAAACTGCTGGAAGATGTCATTCTCCCCTCGTATGACGAACTCAGTACCATGCTCGACCAGCGACAGCAAACCCTGCTATTGCCAGAGAGCGCCGCCGACATCACCGTTCAGGGTGATGCAACCCTGCTGCGGATGTTATTGCGAAACCTGGTAGAAAACGCCCATCGTTACAGCCCGCAAGGCAGCAACATTATGATTAAGCTGCAAGAAGATGACGGAGCGGTCATGGCAGTTGAAGATGAAGGACCAGGTATTGATGAGAGTAAATGCGGGGAGTTGAGTAAAGCGTTTGTACGTATGGACAGCCGTTATGGCGGGATTGGTCTGGGGTTAAGTATTGTCAGCCGCATTACACAGTTGCATCACGGGCAGTTTTTCCTGCAAAACCGGCAAGAGACTTCCGGCACGCGGGCCTGGGTACGGCTGAAGAAAGATCAGTACGTGGCAAACCAGATATAA
|
|
estrain@4
|
280 ATGCATTTTCTGCGCCGACCAATATCGCTGCGCCAACGGCTGATATTGACCATCGGGGCCATTTTGTTGGTGTTTGAGCTGATCAGCGTCTTCTGGCTATGGCATGAAAGTACCGAGCAGATTCAGCTGTTTGAGCAGGCGCTACGCGACAATCGCAACAACGATCGCCACATCATGCGTGAGATCCGCGAGGCGGTCGCCAGCCTGATTGTCCCCGGCGTCTTTATGGTCAGCCTGACGCTATTTATCCGCTATCAGGCGGTACGCCGCATCACCCGCCCGCTGGCGGAGCTGCAAAAAGAGCTGGAAGCGCGCACCGCCGACAACTTAACGCCCATTGCCATTCACAGCGCCACCCTCGAAATCGAAGCGGTGGTTTCGGCGTTAAACGATCTGGTCAGTCGCCTGACCAGCACGCTGGATAACGAAAGGTTGTTTACCGCTGACGTCGCGCACGAACTGCGAACGCCACTGGCGGGGGTGCGTTTGCATCTGGAACTGCTGGCGAAAACGCATCACATTGATGTAGCACCGTTAGTGGCACGGCTTGATCAGATGATGGAGAGCGTCTCCCAGCTGCTGCAACTGGCGCGTGCCGGACAGTCATTTTCTTCCGGTAATTATCAACATGTAAAACTGCTGGAAGATGTCATTCTCCCCTCGTATGACGAACTCAGTACCATGCTCGACCAGCGACAGCAAACCCTGCTATTGCCAGAGAGCGCCGCCGACATCACCGTTCAGGGTGATGCAACCCTGCTGCGGATGTTATTGCGAAACCTGGTAGAAAACGCCCATCGTTACAGCCCGCAAGGCAGCAACATTATGATTAAGCTGCAAGAAGATGACGGAGCGGTCATGGCAGTTGAAGATGAAGGACCAGGTATTGATGAGAGTAAATGCGGGGAGTTGAGTAAAGCGTTTGTACGTATGGACAGCCGTTATGGCGGGATTGGTCTGGGGTTAAGTATTGTCAGCCGCATTACACAGTTGCATCACGGGCAGTTTTTCCTGCAAAACCGGCAAGAGACTTCCGGCACGCGGGCCTGGGTACGGCTGAAGAAAGATCAGTACGTGGCAAACCAGATATAA
|
|
estrain@4
|
281 ATGCATTTTCTGCGCCGACCAATATCGCTGCGCCAACGGCTGATATTGACCATCGGGGCCATTTTGTTGG
|
|
estrain@4
|
282 TGTTTGAGCTGATCAGCGTCTTCTGGCTATGGCATGAAAGTACCGAGCAGATTCAGCTGTTTGAGCAGGC
|
|
estrain@4
|
283 GCTACGCGACAATCGCAACAACGATCGCCACATCATGCGTGAGATCCGCGAGGCGGTCGCCAGCCTGATT
|
|
estrain@4
|
284 GTCCCCGGCGTCTTTATGGTCAGCCTGACGCTATTTATCTGCTATCAGGCGGTACGCCGCATCACCCGCC
|
|
estrain@4
|
285 CGCTGGCGGAGCTGCAAAAAGAGCTGGAAGCGCGCACCGCCGACAACTTAACGCCCATTGCCATTCACAG
|
|
estrain@4
|
286 CGCCACCCTCGAAATCGAAGCGGTGGTTTCGGCGTTAAACGATCTGGTCAGTCGCCTGACCAGCACGCTG
|
|
estrain@4
|
287 GATAACGAAAGGTTGTTTACCGCTGACGTCGCGCACGAACTGCGAACGCCACTGGCGGGGGTGCGTTTGC
|
|
estrain@4
|
288 ATCTGGAACTGCTGGCGAAAACGCATCACATTGATGTAGCACCGTTAGTGGCACGGCTTGATCAGATGAT
|
|
estrain@4
|
289 GGAGAGCGTCTCCCAGCTGCTGCAACTGGCGCGTGCCGGACAGTCATTTTCTTCCGGTAATTATCAACAT
|
|
estrain@4
|
290 GTAAAACTGCTGGAAGATGTCATTCTCCCCTCGTATGACGAACTCAGTACCATGCTCGACCAGCGACAGC
|
|
estrain@4
|
291 AAACCCTGCTATTGCCAGAGAGCGCCGCCGACATCACCGTTCAGGGTGATGCAACCCTGCTGCGGATGTT
|
|
estrain@4
|
292 ATTGCGAAACCTGGTAGAAAACGCCCATCGTTACAGCCCGCAAGGCAGCAACATTATGATTAAGCTGCAA
|
|
estrain@4
|
293 GAAGATGACGGAGCGGTCATGGCAGTTGAAGATGAAGGACCAGGTATTGATGAGAGTAAATGCGGGGAGT
|
|
estrain@4
|
294 TGAGTAAAGCGTTTGTACGTATGGACAGCCGTTATGGCGGGATTGGTCTGGGGTTAAGTATTGTCAGCCG
|
|
estrain@4
|
295 CATTACACAGTTGCATCACGGGCAGTTTTTCCTGCAAAACCGGCAAGAGACTTCCGGCACGCGGGCCTGG
|
|
estrain@4
|
296 GTACGGCTGAAGAAAGATCAGTACGTGGCAAACCAGATATAA
|
|
estrain@4
|
297
|
|
estrain@4
|
298 >contig15 23S_A2058T then 23S_A2058A (wildtype) NC_004431.1:237160-240064
|
|
estrain@4
|
299 ggttaagcgactaagcgtacacggtggatgccctggcagtcagaggcgatgaaggacgtgctaatctgcgataagcgtcggtaaggtgatatgaaccgttataaccggcgatttccgaatggggaaacccagtgtgtttcgacacactatcattaactgaatccataggttaatgaggcgaaccgggggaactgaaacatctaagtaccccgaggaaaagaaatcaaccgagattcccccagtagcggcgagcgaacggggaggagcccagagcctgaatcagtgtgtgtgttagtggaagcgtctggaaaggcgcgcgatacagggtgacagccccgtacacaaaaatgcacatgctgtgagctcgatgagtagggcgggacacgtggtatcctgtctgaatatggggggaccatcctccaaggctaaatactcctgactgaccgatagtgaaccagtaccgtgagggaaaggcgaaaagaaccccggcgaggggagtgaaaaagaacctgaaaccgtgtacgtacaagcagtgggagcatgcttaggcgtgtgactgcgtaccttttgtataatgggtcagcgacttatattctgtagcaaggttaaccgaataggggagccgaagggaaaccgagtcttaactgggcgttaagttgcagggtatagacccgaaacccggtgatctagccatgggcaggttgaaggttgggtaacactaactggaggaccgaaccgactaatgttgaaaaattagcggatgacttgtggctgggggtgaaaggccaatcaaaccgggagatagctggttctccccgaaagctatttaggtagcgcctcgtgaactcatctccgggggtagagcactgtttcggcaagggggtcatcccgacttaccaacccgatgcaaactgcgaataccggagaatgttatcacgggagacacacggcgggtgctaacgtccgtcgngaagagggaaacaacccagaccgccagctaaggtcccaaagtcatggttaagtgggaaacgatgtgggaaggcccagacagccaggatgttggcttagaagcagccatcatttaaagaaagcgtaatagctcactggtcgagtcggcctgcgcggaagatgtaacggggctaaaccatgcaccgaagctgcggcagcgacgcttatgcgttgttgggtaggggagcgttctgtaagcctgtgaaggtgtactgtgaggtatgctggaggtatcagaagtgcgaatgctgacataagtaacgataaagcgggtgaaaagcccgctcgccggaagaccaagggttcctgtccaacgttaatcggggcagggtgagtcgacccctaaggcgaggccgaaaggcgtagtcgatgggaaacaggttaatattcctgtacttggtgttactgcgaaggggggacggagaaggctatgttggccgggcgacggttgtcccggtttaagcgtgtaggctggttttccaggcaaatccggaaaatcaaggctgaggcgtgatgacgaggcactacggtgctgaagcaacaaatgccctgcttccaggaaaagcctctaagcatcaggtaacatcaaatcgtaccccaaaccgacacaggtggtcaggtagagaataccaaggcgcttgagagaactcgggtgaaggaactaggcaaaatggtgccgtaacttcgggagaaggcacgctgatatgtaggtgaagcgacttgctcgtggagctgaaatcagtcgaagataccagctggctgcaactgtttattaaaaacacagcactgtgcaaacacgaaagtggacgtatacggtgtgacgcctgcccggtgccggaaggttaattgatggggttagcgcaagcgaagctcttgatcgaagccccggtaaacggcggccgtaactataacggtcctaaggtagcgaaattccttgtcgggtaagttccgacctgcacgaatggcgtaatgatggccaggctgtctccacccgagactcagtgaaattgaactcgctgtgaagatgcagtgtacccgcggcaagacggTaagaccccgtgaacctttactatagcttgacactgaacattgagccttgatgtgtaggataggtgggaggctttgaagtgtggacgccagtctgcatggagccgaccttgaaataccaccctttaatgtttgatgttctaacgttgacccgtaatccgggttgcggacagtgtctggtgggtagtttgactggggcggtctcctcctaaagagtaacggaggagcacgaaggttggctaatcctggtcggacatcaggaggttagtgcaatggcataagccagcttgactgcgagcgtgacggcgcgagcaggtgcgaaagcaggtcatagtgatccggtggttctgaatggaagggccatcgctcaacggataaaaggtactccggggataacaggctgataccgcccaagagttcatatcgacggcggtgtttggcacctcgatgtcggctcatcacatcctggggctgaagtaggtcccaagggtatggctgttcgccatttaaagtggtacgcgagctgggtttagaacgtcgtgagacagttcggtccctatctgccgtgggcgctggagaactgaggggggctgctcctagtacgagaggaccggagtggacgcatcactggtgttcgggttgtcatgccaatggcactgcccggtagctaaatgcggaagagataagtgctgaaagcatctaagcacgaaacttgccccgagatgagttctccctgactccttgagggtcctgaaggaacgttgaagacgacgacgttgataggccgggtgtgtaagcgcagcgatgcgttgagctaaccggtactaatgaaccgtgaggcttaacctta
|
|
estrain@4
|
300 ggttaagcgactaagcgtacacggtggatgccctggcagtcagaggcgatgaaggacgtgctaatctgcgataagcgtcg
|
|
estrain@4
|
301 gtaaggtgatatgaaccgttataaccggcgatttccgaatggggaaacccagtgtgtttcgacacactatcattaactga
|
|
estrain@4
|
302 atccataggttaatgaggcgaaccgggggaactgaaacatctaagtaccccgaggaaaagaaatcaaccgagattccccc
|
|
estrain@4
|
303 agtagcggcgagcgaacggggaggagcccagagcctgaatcagtgtgtgtgttagtggaagcgtctggaaaggcgcgcga
|
|
estrain@4
|
304 tacagggtgacagccccgtacacaaaaatgcacatgctgtgagctcgatgagtagggcgggacacgtggtatcctgtctg
|
|
estrain@4
|
305 aatatggggggaccatcctccaaggctaaatactcctgactgaccgatagtgaaccagtaccgtgagggaaaggcgaaaa
|
|
estrain@4
|
306 gaaccccggcgaggggagtgaaaaagaacctgaaaccgtgtacgtacaagcagtgggagcatgcttaggcgtgtgactgc
|
|
estrain@4
|
307 gtaccttttgtataatgggtcagcgacttatattctgtagcaaggttaaccgaataggggagccgaagggaaaccgagtc
|
|
estrain@4
|
308 ttaactgggcgttaagttgcagggtatagacccgaaacccggtgatctagccatgggcaggttgaaggttgggtaacact
|
|
estrain@4
|
309 aactggaggaccgaaccgactaatgttgaaaaattagcggatgacttgtggctgggggtgaaaggccaatcaaaccggga
|
|
estrain@4
|
310 gatagctggttctccccgaaagctatttaggtagcgcctcgtgaactcatctccgggggtagagcactgtttcggcaagg
|
|
estrain@4
|
311 gggtcatcccgacttaccaacccgatgcaaactgcgaataccggagaatgttatcacgggagacacacggcgggtgctaa
|
|
estrain@4
|
312 cgtccgtcgngaagagggaaacaacccagaccgccagctaaggtcccaaagtcatggttaagtgggaaacgatgtgggaa
|
|
estrain@4
|
313 ggcccagacagccaggatgttggcttagaagcagccatcatttaaagaaagcgtaatagctcactggtcgagtcggcctg
|
|
estrain@4
|
314 cgcggaagatgtaacggggctaaaccatgcaccgaagctgcggcagcgacgcttatgcgttgttgggtaggggagcgttc
|
|
estrain@4
|
315 tgtaagcctgtgaaggtgtactgtgaggtatgctggaggtatcagaagtgcgaatgctgacataagtaacgataaagcgg
|
|
estrain@4
|
316 gtgaaaagcccgctcgccggaagaccaagggttcctgtccaacgttaatcggggcagggtgagtcgacccctaaggcgag
|
|
estrain@4
|
317 gccgaaaggcgtagtcgatgggaaacaggttaatattcctgtacttggtgttactgcgaaggggggacggagaaggctat
|
|
estrain@4
|
318 gttggccgggcgacggttgtcccggtttaagcgtgtaggctggttttccaggcaaatccggaaaatcaaggctgaggcgt
|
|
estrain@4
|
319 gatgacgaggcactacggtgctgaagcaacaaatgccctgcttccaggaaaagcctctaagcatcaggtaacatcaaatc
|
|
estrain@4
|
320 gtaccccaaaccgacacaggtggtcaggtagagaataccaaggcgcttgagagaactcgggtgaaggaactaggcaaaat
|
|
estrain@4
|
321 ggtgccgtaacttcgggagaaggcacgctgatatgtaggtgaagcgacttgctcgtggagctgaaatcagtcgaagatac
|
|
estrain@4
|
322 cagctggctgcaactgtttattaaaaacacagcactgtgcaaacacgaaagtggacgtatacggtgtgacgcctgcccgg
|
|
estrain@4
|
323 tgccggaaggttaattgatggggttagcgcaagcgaagctcttgatcgaagccccggtaaacggcggccgtaactataac
|
|
estrain@4
|
324 ggtcctaaggtagcgaaattccttgtcgggtaagttccgacctgcacgaatggcgtaatgatggccaggctgtctccacc
|
|
estrain@4
|
325 cgagactcagtgaaattgaactcgctgtgaagatgcagtgtacccgcggcaagacggaaagaccccgtgaacctttacta
|
|
estrain@4
|
326 tagcttgacactgaacattgagccttgatgtgtaggataggtgggaggctttgaagtgtggacgccagtctgcatggagc
|
|
estrain@4
|
327 cgaccttgaaataccaccctttaatgtttgatgttctaacgttgacccgtaatccgggttgcggacagtgtctggtgggt
|
|
estrain@4
|
328 agtttgactggggcggtctcctcctaaagagtaacggaggagcacgaaggttggctaatcctggtcggacatcaggaggt
|
|
estrain@4
|
329 tagtgcaatggcataagccagcttgactgcgagcgtgacggcgcgagcaggtgcgaaagcaggtcatagtgatccggtgg
|
|
estrain@4
|
330 ttctgaatggaagggccatcgctcaacggataaaaggtactccggggataacaggctgataccgcccaagagttcatatc
|
|
estrain@4
|
331 gacggcggtgtttggcacctcgatgtcggctcatcacatcctggggctgaagtaggtcccaagggtatggctgttcgcca
|
|
estrain@4
|
332 tttaaagtggtacgcgagctgggtttagaacgtcgtgagacagttcggtccctatctgccgtgggcgctggagaactgag
|
|
estrain@4
|
333 gggggctgctcctagtacgagaggaccggagtggacgcatcactggtgttcgggttgtcatgccaatggcactgcccggt
|
|
estrain@4
|
334 agctaaatgcggaagagataagtgctgaaagcatctaagcacgaaacttgccccgagatgagttctccctgactccttga
|
|
estrain@4
|
335 gggtcctgaaggaacgttgaagacgacgacgttgataggccgggtgtgtaagcgcagcgatgcgttgagctaaccggtac
|
|
estrain@4
|
336 taatgaaccgtgaggcttaacctta
|
