annotate test-data/2019-08-27.1/AMR_DNA-Campylobacter @ 3:dddde93d5c20

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author estrain
date Fri, 06 Mar 2020 10:43:40 -0500
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estrain@3 1 >NC_022347.1:1040292-1037381
estrain@3 2 aaaaaaggtaagctactaagagcgaatggtggatgccttgactggtaaaggcgatgaaggacgtactagactgcgataag
estrain@3 3 ctacggggagctgtcaagaagctttgatccgtagatttccgaatggggcaacccaatgtatagagatatacattacctat
estrain@3 4 ataggagcgaacgaggggaattgaaacatcttagtaccctcaggaaaagaaatcaatagagattgcgtcagtagcggcga
estrain@3 5 gcgaaagcgcaagagggcaaacccagtgcttgcactgggggttgtaggactgcaatgtgcaagaggtaagtttagcagaa
estrain@3 6 cattctggaaagtatagccatagagggtgatagtcccgtatgcgaaaaacaaaccttagctagcagtatcctgagtaggg
estrain@3 7 cgggacacgagaaatcctgtctgaagctgggtcgaccacgatccaaccctaaatactaataccagatcgatagtgcacaa
estrain@3 8 gtaccgtgagggaaaggtgaaaagaactgaggtgatcagagtgaaatagaacctgaaaccatttgcttacaatcattcag
estrain@3 9 agccctatgtagcaatacagggtgatggactgccttttgcataatgagcctgcgagttgtggtgtctggcaaggttaagc
estrain@3 10 aaacgcgaagccgtagcgaaagcgagtctgaatagggcgcttagtcagatgctgcagacccgaaacgaagtgatctatcc
estrain@3 11 atgagcaagttgaagctagtgtaagaactagtggaggactgaacccataggcgttgaaaagccccgggatgacttgtgga
estrain@3 12 taggggtgaaaggccaatcaaacttcgtgatagctggttctctccgaaatatatttaggtatagcgttgtgtcgtaatat
estrain@3 13 aagggggtagagcactgaatgggctagggcatacaccaatgtaccaaaccctatcaaactccgaataccttatatgtaat
estrain@3 14 cacagcagtcaggcggcgagtgataaaatccgtcgtcaagagggaaacaacccagactaccagctaaggtccctaaatct
estrain@3 15 tacttaagtggaaaacgatgtgaagttacttaaacaaccaggaggttggcttagaagcagccatcctttaaagaaagcgt
estrain@3 16 aatagctcactggtctagtgattttgcgcggaaaatataacggggctaaagtaagtaccgaagctgtagacttgcgcaca
estrain@3 17 acttagattatttaagtttagaatatgagaaactaagttatatgtttagttatatttttactgatttttatagagtaaag
estrain@3 18 atagaaataaaacttagtaaaatcagtaaaaatattcttagactaaagttaagtagtttaagttgtgtgcaagtggtagg
estrain@3 19 agagcgttctatttgcgtcgaaggtataccggtaaggagtgctggagcgaatagaagtgagcatgcaggcatgagtagcg
estrain@3 20 ataattaatgtgagaatcattaacgccgtaaacccaaggtttcctacgcgatgctcgtcatcgtagggttagtcgggtcc
estrain@3 21 taagtcgagtccgaaaggggtagacgatggcaaattggttaatattccaataccaacattagtgtgcgatggaaggacgc
estrain@3 22 ttagggctaagggggctagcggatggaagtgctagtctaaggtcgtaggaggttatacaggcaaatccgtataacaatac
estrain@3 23 tccgagaactgaaaggctttttgaagtcttcggatggatagaagaacccctgatgccgtcgagccaagaaaagtttctaa
estrain@3 24 gtttagctaatgttgcccgtaccgtaaaccgacacaggtgggtgggatgagtattctaaggcgcgtggaagaactctctt
estrain@3 25 taaggaactctgcaaaatagcaccgtatcttcggtataaggtgtggttcgcttcgtattaggatttactccgaaagcgaa
estrain@3 26 gaaacttacaacaaagagtccctcccgactgtttaccaaaaacacagcactctgctaactcgtaagaggatgtatagggt
estrain@3 27 gtgacgcctgcccggtgctcgaaggttaattgatggggttagcattagcgaagctcttgatcgaagcccgagtaaacggc
estrain@3 28 ggccgtaactataacggtcctaaggtagcgaaattccttgtcggttaaataccgacctgcatgaatggcgtaacgagatg
estrain@3 29 ggagctgtctcaaagagggatccagtgaaattgtagtggaggtgaaaattcctcctacccgcggcaagacggaaagaccc
estrain@3 30 cgtggacctttactacagcttgacactgctatttggataagaatgtgcaggataggtgggaggctttgagtatatgacgc
estrain@3 31 cagttgtatatgagccattgttgagataccactctttcttatttgggtagctaaccagcttgagttatcctcaagtggga
estrain@3 32 caatgtctggtgggtagtttgactggggcggtcgcctcccaaataataacggaggcttacaaaggttggctcagaacggt
estrain@3 33 tggaaatcgttcgtagagtataaaggtataagccagcttaactgcaagacatacaagtcaagcagagacgaaagtcggtc
estrain@3 34 ttagtgatccggtggttctgcgtggaagggccatcgctcaaaggataaaaggtaccccggggataacaggctgatctccc
estrain@3 35 ccaagagctcacatcgacggggaggtttggcacctcgatgtcggctcatcgcatcctggggctggagcaggtcccaaggg
estrain@3 36 tatggctgttcgccatttaaagcggtacgcgagctgggttcagaacgtcgtgagacagttcggtccctatctgccgtggg
estrain@3 37 cgtaagaagattgaagagatttgaccctagtacgagaggaccgggttgaacaaaccactggtgtagctgttgttctgcca
estrain@3 38 agagcatcgcagcgtagctaagtttggaaagg
estrain@3 39 >NC_002163.1:396449-399360
estrain@3 40 agctactaagagcgaatggtggatgccttgactggtaaaggcgatgaaggacgtactagactgcgataagctacggggag
estrain@3 41 ctgtcaagaagctttgatccgtagatttccgaatggggcaacccaatgtatagagatatacattacctatataggagcga
estrain@3 42 acgaggggaattgaaacatcttagtaccctcaggaaaagaaatcaatagagattgcgtcagtagcggcgagcgaaagcgc
estrain@3 43 aagagggcaaacccagtgcttgcactgggggttgtaggactgcaatgtgcaagagctgagtttagcagaacattctggaa
estrain@3 44 agtatagccatagagggtgatagtcccgtatgcgaaaaacaaagcttagctagcagtatcctgagtagggcgggacacga
estrain@3 45 ggaatcctgtctgaatccgggtcgaccacgatccaaccctaaatactaataccagatcgatagtgcacaagtaccgtgag
estrain@3 46 ggaaaggtgaaaagaactgaggtgatcagagtgaaatagaacctgaaaccatttgcttacaatcattcagagcactatgt
estrain@3 47 agcaatacagtgtgatggactgccttttgcataatgagcctgcgagttgtggtgtctggcaaggttaagcaaacgcgaag
estrain@3 48 ccgtagcgaaagcgagtctgaatagggcgcttagtcagatgctgcagacccgaaacgaagtgatctatccatgagcaagt
estrain@3 49 tgaagctagtgtaagaactagtggaggactgaacccataggcgttgaaaagccccgggatgacttgtggataggggtgaa
estrain@3 50 aggccaatcaaacttcgtgatagctggttctctccgaaatatatttaggtatagcgttgtgtcgtaatataagggggtag
estrain@3 51 agcactgaatgggctagggcatacaccaatgtaccaaaccctatcaaactccgaataccttatatgtaatcacagcagtc
estrain@3 52 aggcggcgagtgataaaatccgtcgtcaagagggaaacaacccagactaccagctaaggtccctaaatcttacttaagtg
estrain@3 53 gaaaacgatgtgaagttacttaaacaaccaggaggttggcttagaagcagccatcctttaaagaaagcgtaatagctcac
estrain@3 54 tggtctagtgattttgcgcggaaaatataacggggctaaagtaagtaccgaagctgtagacttagtttactaagtggtag
estrain@3 55 gagagcgttctatttgcgtcgaaggtataccggtaaggagtgctggagcgaatagaagtgagcatgcaggcatgagtagc
estrain@3 56 gataattaatgtgagaatcattaacgccgtaaacccaaggtttcctacgcgatgctcgtcatcgtagggttagtcgggtc
estrain@3 57 ctaagtcgagtccgaaaggggtagacgatggcaaattggttaatattccaataccaacattagtgtgcgatggaaggacg
estrain@3 58 cttagggctaagggggctagcggatggaagtgctagtctaaggtcgtaggaggttatacaggcaaatccgtataacaata
estrain@3 59 ctccgagaactgaaaggctttttgaagtcttcggatggatagaagaacccctgatgccgtcgagccaagaaaagtttcta
estrain@3 60 agtttagctaatgttgcccgtaccgtaaaccgacacaggtgggtgggatgagtattctaaggcgcgtggaagaactctct
estrain@3 61 ttaaggaactctgcaaaatagcaccgtatcttcggtataaggtgtggttagctttgtattaggatttactctgaaagcaa
estrain@3 62 ggaaacttacaacaaagagtccctcccgactgtttaccaaaaacacagcactctgctaactcgtaagaggatgtataggg
estrain@3 63 tgtgacgcctgcccggtgctcgaaggttaattgatggggttagcattagcgaagctcttgatcgaagcccgagtaaacgg
estrain@3 64 cggccgtaactataacggtcctaaggtagcgaaattccttgtcggttaaataccgacctgcatgaatggcgtaacgagat
estrain@3 65 gggagctgtctcaaagagggatccagtgaaattgtagtggaggtgaaaattcctcctacccgcggcaagacggaaagacc
estrain@3 66 ccgtggacctttactacagcttgacactgctacttggataagaatgtgcaggataggtgggaggctttgagtatatgacg
estrain@3 67 ccagttgtatatgagccattgttgagataccactctttcttatttgggtagctaaccagcttgagttatcctcaagtggg
estrain@3 68 acaatgtctggtgggtagtttgactggggcggtcgcctcccaaataataacggaggcttacaaaggttggctcagaacgg
estrain@3 69 ttggaaatcgttcgtagagtataaaggtataagccagcttaactgcaagacatacaagtcaagcagagacgaaagtcggt
estrain@3 70 cttagtgatccggtggttctgtgtggaagggccatcgctcaaaggataaaaggtaccccggggataacaggctgatctcc
estrain@3 71 cccaagagctcacatcgacggggaggtttggcacctcgatgtcggctcatcgcatcctggggctggagcaggtcccaagg
estrain@3 72 gtatggctgttcgccatttaaagcggtacgcgagctgggttcagaacgtcgtgagacagttcggtccctatctgccgtgg
estrain@3 73 gcgtaagaagattgaagagatttgaccctagtacgagaggaccgggttgaacaaaccactggtgtagctgttgttctgcc
estrain@3 74 aagagcatcgcagcgtagctaagtttggaaaggataaacgctgaaagcatctaagcgtgaagccaactctaagatgaatc
estrain@3 75 ttctctaagctctctagaagactactagtttgataggctgggtgtgtaatggatgaaagtcctttagctgaccagtacta
estrain@3 76 atagagcgtttggcttatctttaataaagcat