Mercurial > repos > estrain > ncbi_amrfinderplus

diff amrfinderplus/test-data/test_prot.gff @ 4:6cab26b67987

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author estrain
date Fri, 06 Mar 2020 10:45:32 -0500
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/amrfinderplus/test-data/test_prot.gff	Fri Mar 06 10:45:32 2020 -0500
@@ -0,0 +1,16 @@
+##gff-version 3
+##sequence-region contig1 1-50000
+contig01	.	gene	101	961	.	+	.	ID=gene1;Name=blaTEM-156
+contigX	.	gene	1	501	.	+	.	ID=gene2;Name=nimIJ_hmm
+contig02	.	gene	1	1191	.	+	.	ID=gene3;Name=blaPDC-114_blast
+contig03	.	gene	101	802	.	+	.	ID=gene4;Name=blaOXA-436_partial
+contig04	.	gene	101	1147	.	+	.	ID=gene5;Name=vanG
+contig06	.	gene	31	2616	.	+	.	ID=gene6;Name=gyrA
+contig07	.	gene	101	526	.	+	.	ID=gene7;Name=50S_L22
+contig09	.	gene	1	675	.	-	.	Name=aph3pp-Ib_partial_5p_neg
+contig09	.	gene	715	1377	.	-	.	Name=sul2_partial_3p_neg
+contig11	.	gene	113	547	.	+	.	Name=blaTEM-internal_stop
+contig12	.	gene	71	637	.	+	.	Name=qacR-curated_blast
+contig13	.	gene	1	1137	.	+	.	Name=emrD3-suppressed-in-vibrio
+contig13	.	gene	1141	1491	.	+	.	Name=arsR-suppressed-in-escherichia
+contig14	.	gene	1093	2181	.	+	.	Name=pmrB_C84R