Mercurial > repos > estrain > seqsero2_v1_0_1

diff SeqSero2_package.py @ 42:1afc8c8d16b1 tip

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
Uploaded
author estrain
date Sat, 07 Sep 2019 20:38:09 -0400
parents 4fcd9834e66b
children
line wrap: on
line diff
--- a/SeqSero2_package.py	Sat Sep 07 19:47:49 2019 -0400
+++ b/SeqSero2_package.py	Sat Sep 07 20:38:09 2019 -0400
@@ -1217,7 +1217,6 @@
   salmID_output=subprocess.Popen("python "+ dirpath + "/SalmID.py -i "+fnameA,shell=True,stdout=subprocess.PIPE,stderr=subprocess.PIPE)
   out, err = salmID_output.communicate()
   out=out.decode("utf-8")
-  err=err.decode("utf-8")
   file=open("data_log.txt","a")
   file.write(out)
   file.close()