Mercurial > repos > galaxytrakr > cfsan2snp2
annotate tool-data/all_fasta.loc.sample @ 11:2f515550dc87 draft
planemo upload commit 27fcf68ceea4b7dadd35ea0b9ffd0ed3f967e9fc
| author | galaxytrakr |
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| date | Thu, 19 Mar 2026 14:17:50 +0000 |
| parents | 8e7a84e62b43 |
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8e7a84e62b43
planemo upload commit e734452c606dba89b6fe58c90c5f38e5ea067edd
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1 #This file lists the locations and dbkeys of all the fasta files |
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8e7a84e62b43
planemo upload commit e734452c606dba89b6fe58c90c5f38e5ea067edd
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2 #under the "genome" directory (a directory that contains a directory |
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planemo upload commit e734452c606dba89b6fe58c90c5f38e5ea067edd
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3 #for each build). The script extract_fasta.py will generate the file |
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8e7a84e62b43
planemo upload commit e734452c606dba89b6fe58c90c5f38e5ea067edd
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4 #all_fasta.loc. This file has the format (white space characters are |
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8e7a84e62b43
planemo upload commit e734452c606dba89b6fe58c90c5f38e5ea067edd
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5 #TAB characters): |
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8e7a84e62b43
planemo upload commit e734452c606dba89b6fe58c90c5f38e5ea067edd
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6 # |
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7 #<unique_build_id> <dbkey> <display_name> <file_path> |
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planemo upload commit e734452c606dba89b6fe58c90c5f38e5ea067edd
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8 # |
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planemo upload commit e734452c606dba89b6fe58c90c5f38e5ea067edd
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9 #So, all_fasta.loc could look something like this: |
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8e7a84e62b43
planemo upload commit e734452c606dba89b6fe58c90c5f38e5ea067edd
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10 #test1 test1 Test-Genome ./test-data/test1.fa |
