# HG changeset patch # User galaxytrakr # Date 1773927128 0 # Node ID ec50b4ed004cf920db39870247fe6945ae875cbb # Parent 0bf7e9b50206b562c4bdb8712d8de096a1c4ed61 planemo upload commit 73945687c1471741694cf99bbcdb8465ab5110f6 diff -r 0bf7e9b50206 -r ec50b4ed004c Dockerfile --- a/Dockerfile Thu Mar 19 13:22:33 2026 +0000 +++ b/Dockerfile Thu Mar 19 13:32:08 2026 +0000 @@ -40,7 +40,6 @@ pandas~=1.2.0 pybedtools refchooser scikit-learn # ---- Fetch sources/artifacts ---- - # bedtools ADD https://github.com/arq5x/bedtools2/archive/refs/tags/v${BEDTOOLS_VER}.tar.gz . # mummer diff -r 0bf7e9b50206 -r ec50b4ed004c cfsan2snp-screen.xml --- a/cfsan2snp-screen.xml Thu Mar 19 13:22:33 2026 +0000 +++ b/cfsan2snp-screen.xml Thu Mar 19 13:32:08 2026 +0000 @@ -1,4 +1,4 @@ - + Screen query assemblies against reference assemblies quay.io/galaxytrakr/cfsan2snp2:v.0.9.7.7 diff -r 0bf7e9b50206 -r ec50b4ed004c cfsan2snp-snp.xml --- a/cfsan2snp-snp.xml Thu Mar 19 13:22:33 2026 +0000 +++ b/cfsan2snp-snp.xml Thu Mar 19 13:32:08 2026 +0000 @@ -1,4 +1,4 @@ - + Run SNP Pipeline analysis on isolates using one or more references. quay.io/galaxytrakr/cfsan2snp2:v.0.9.7.7