Mercurial > repos > galaxytrakr > data_manager_build_staramr

diff test-data/staramr_database.loc.test @ 0:a964ea1aac78 draft default tip

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planemo upload commit ba464c236e59b583ea262564bb7e2b21aa7353ff
author galaxytrakr
date Thu, 26 Mar 2026 19:31:12 +0000
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/staramr_database.loc.test	Thu Mar 26 19:31:12 2026 +0000
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+#This is a tab separated file describing the location of StarAMR databases 
+#used for the StarAMR tool
+#
+#file has this format (white space characters are TAB characters)
+#
+#The columns are:
+#value name path resfinder_commit pointfinder_commit plasmidfinder_commit
+#
+#For example
+#staramr_downloaded_20241004_resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502 ResFinder: tag 4.6.0, commit d1e607b, 2024-08-06 - PointFinder: tag 4.1.1, commit 694919f, 2024-08-08 - PlasmidFinder: commit 3e77502, 2024-03-07 (downloaded 20241004) /path/to/data d1e607b 694919f 3e77502
+staramr_downloaded_13012025_resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502 starAMR databases with ResFinder: 2.4.0_d1e607b_2024-08-06, PointFinder: 4.1.1_694919f_2024-08-08, PlasmidFinder: 3e77502_2024-03-07 /tmp/tmpc6qeamum/galaxy-dev/tool-data/staramr/resfinder_d1e607b_pointfinder_694919f_plasmidfinder_3e77502 d1e607b 694919f 3e77502
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