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1 params {
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2 workflow_conceived_by = 'Kranti Konganti'
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3 workflow_built_by = 'Kranti Konganti'
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4 workflow_version = '1.0.0'
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5 pdg_release = 'PDG000000002.3082'
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6 ncbi_asm_suffix = '_genomic.fna.gz'
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7 wcomp_serocol = false
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8 wcomp_seronamecol = false
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9 wcomp_acc_col = false
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10 wcomp_target_acc_col = false
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11 wcomp_complete_sero = false
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12 wcomp_not_null_serovar = false
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13 wcomp_num = false
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14 wcomp_min_contig_size = false
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15 wcomp_i = false
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16 wsnp_serocol = false
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17 wsnp_seronamecol = false
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18 wsnp_acc_col = false
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19 wsnp_target_acc_col = false
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20 wsnp_complete_sero = true
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21 wsnp_not_null_serovar = false
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22 wsnp_num = false
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23 wsnp_i = "'I 4,[5],12:i:-'"
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24 genomes_chunk = 100
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25 mashsketch_run = true
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26 mashsketch_l = true
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27 mashsketch_I = false
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28 mashsketch_C = false
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29 mashsketch_k = 21
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30 mashsketch_s = 1000
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31 mashsketch_i = false
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32 mashsketch_S = false
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33 mashsketch_w = false
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34 mashsketch_r = false
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35 mashsketch_b = false
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36 mashsketch_m = false
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37 mashsketch_c = false
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38 mashsketch_g = false
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39 mashsketch_n = false
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40 mashsketch_a = false
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41 mashsketch_z = false
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42 mashsketch_Z = false
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43 }
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