Mercurial > repos > galaxytrakr > hfp_bettercallsal_konda
diff 1.0.0/workflows/conf/bettercallsal_db.config @ 0:0a8dda29956e draft default tip
planemo upload
| author | galaxytrakr |
|---|---|
| date | Thu, 28 May 2026 20:41:10 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/1.0.0/workflows/conf/bettercallsal_db.config Thu May 28 20:41:10 2026 +0000 @@ -0,0 +1,43 @@ +params { + workflow_conceived_by = 'Kranti Konganti' + workflow_built_by = 'Kranti Konganti' + workflow_version = '1.0.0' + pdg_release = 'PDG000000002.3082' + ncbi_asm_suffix = '_genomic.fna.gz' + wcomp_serocol = false + wcomp_seronamecol = false + wcomp_acc_col = false + wcomp_target_acc_col = false + wcomp_complete_sero = false + wcomp_not_null_serovar = false + wcomp_num = false + wcomp_min_contig_size = false + wcomp_i = false + wsnp_serocol = false + wsnp_seronamecol = false + wsnp_acc_col = false + wsnp_target_acc_col = false + wsnp_complete_sero = true + wsnp_not_null_serovar = false + wsnp_num = false + wsnp_i = "'I 4,[5],12:i:-'" + genomes_chunk = 100 + mashsketch_run = true + mashsketch_l = true + mashsketch_I = false + mashsketch_C = false + mashsketch_k = 21 + mashsketch_s = 1000 + mashsketch_i = false + mashsketch_S = false + mashsketch_w = false + mashsketch_r = false + mashsketch_b = false + mashsketch_m = false + mashsketch_c = false + mashsketch_g = false + mashsketch_n = false + mashsketch_a = false + mashsketch_z = false + mashsketch_Z = false +}
