Mercurial > repos > galaxytrakr > hfp_centriflaken_awsbatch

comparison 0.4.2/workflows/conf/spades_only.config @ 0:082e0091e813 draft default tip

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author galaxytrakr
date Fri, 29 May 2026 13:27:47 +0000
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-1:000000000000 0:082e0091e813
1 params {
2 workflow_built_by = 'Kranti.Konganti@fda.hhs.gov'
3 workflow_version = '0.1.0'
4 spades_run = true
5 spades_isolate = false
6 spades_sc = false
7 spades_meta = false
8 spades_bio = false
9 spades_corona = false
10 spades_rna = false
11 spades_plasmid = false
12 spades_metaviral = false
13 spades_metaplasmid = false
14 spades_rnaviral = false
15 spades_iontorrent = false
16 spades_only_assembler = false
17 spades_careful = false
18 spades_cov_cutoff = false
19 spades_k = false
20 spades_hmm = false
21 fq_filter_by_len = 75
22 fq_suffix = '_R1_001.fastq.gz'
23 fq2_suffix = '_R2_001.fastq.gz'
24 }