Mercurial > repos > galaxytrakr > hfp_cronology_awsbatch

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author galaxytrakr
date Fri, 29 May 2026 13:32:17 +0000
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-1:000000000000 0:9e8b1c747a6a
1 cff-version: 1.2.0
2 abstract: "cronology is an automated workflow for Cronobacter whole genome sequence assembly, subtyping and isolate clustering based on NCBI Pathogen Detection Project for Cronobacter."
3 message: "If you use this software, please cite it as below."
4 authors:
5 - family-names: "Konganti"
6 given-names: "Kranti"
7 - family-names: "Ramachandran"
8 given-names: "Padmini"
9 - family-names: "Pava-Ripoll"
10 given-names: "Monica"
11 - family-names: "Jarvis"
12 given-names: "Karen"
13 - family-names: "Balkey"
14 given-names: "Maria"
15 - family-names: "Timme"
16 given-names: "Ruth"
17 - family-names: "Gopinathrao"
18 given-names: "Gopal"
19 - family-names: "Chen"
20 given-names: "Yi"
21 - family-names: "Grim"
22 given-names: "Christopher"
23 title: "cronology: An automated bioinformatics workflow for Cronobacter whole genome sequence assembly, subtyping and isolate clustering."
24 version: 0.1.0
25 date-released: 2024-01-04
26 url: "https://github.com/CFSAN-Biostatistics/cronology"
27 keywords:
28 - "nextflow"
29 - "cronobacter"
30 - "subtyping"
31 - "RMLST"
32 - "PubMLST"
33 - "ncbi-pathogens"
34 - "mlst"
35 - "nextflow-pipelines"
36 license:
37 - MIT