Mercurial > repos > jpayne > bioproject_to_srr_2

comparison bio2srr.xml @ 6:b2745907b1eb

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planemo upload for repository https://toolrepo.galaxytrakr.org/view/jpayne/bioproject_to_srr_2/556cac4fb538
author jpayne
date Fri, 03 May 2024 03:51:26 -0400
parents 1a3038b6d1dd
children 5eb2d5e3bf22
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5:1a3038b6d1dd 6:b2745907b1eb
1 <tool id="bio2srr" name="Bioproject to SRR" version="3.0.0"> 1 <tool id="bio2srr" name="Bioproject to SRR" version="3.0.0">
2 <description>Retrieve SRR accessions and sample metadata from BioProject. Recursively follows links to subprojects.</description> 2 <description>Retrieve SRR accessions and sample metadata from BioProject. Recursively follows links to subprojects.</description>
3 <requirements> 3 <requirements>
4 <requirement type="package" version="3.12">python</requirement> 4 <container type="docker">crashfrog/bio2srr</container>
5 <requirement type="package" version="2.2.1">urllib3</requirement>
6 <requirement type="package" version="2.31.0">requests</requirement>
7 </requirements> 5 </requirements>
8 <command detect_errors="exit_code"><![CDATA[ 6 <command detect_errors="exit_code"><![CDATA[
9 python $__tool_directory__/bio2srr.py "$input1" 7 python $__tool_directory__/bio2srr.py "$input1"
10 ]]></command> 8 ]]></command>
11 <inputs> 9 <inputs>