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planemo upload for repository https://toolrepo.galaxytrakr.org/view/jpayne/bioproject_to_srr_2/556cac4fb538
author jpayne
date Mon, 20 May 2024 02:25:23 -0400
parents fc77995bc4da
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bioproject	biosample_accession	organism	taxid	package	Genus	ProjectAccession	PublicAccession	Species	attribute_package	collected_by	collection_date	geo_loc_name	isolate	isolate_name_alias	isolation_source	lat_lon	project_name	sequenced_by	sra_run_accession	strain	total_bases	total_spots
PRJNA681235	SAMN16946945	Escherichia coli O157:H7	83334	Pathogen.env.1.0	Escherichia	PRJNA681235	CFSAN091029	coli	environmental/food/other	CDC	2019	USA		CFSAN091029	missing	missing	GenomeTrakr	FDA Center for Food Safety and Applied Nutrition	SRR13160357	ECP19-2498	312756765	660858
PRJNA681235	SAMN16946945	Escherichia coli O157:H7	83334	Pathogen.env.1.0	Escherichia	PRJNA681235	CFSAN091029	coli	environmental/food/other	CDC	2019	USA		CFSAN091029	missing	missing	GenomeTrakr	FDA Center for Food Safety and Applied Nutrition	SRR13160358	ECP19-2498	327001270	704624
PRJNA681235	SAMN16946946	Escherichia coli O157:H7	83334	Pathogen.env.1.0	Escherichia	PRJNA681235	CFSAN091027	coli	environmental/food/other	CDC	2019	USA		CFSAN091027	missing	missing	GenomeTrakr	FDA Center for Food Safety and Applied Nutrition	SRR13160360	ECP19-598	316865532	683880
PRJNA681235	SAMN16946947	Escherichia coli O157:H7	83334	Pathogen.env.1.0	Escherichia	PRJNA681235	CFSAN091028	coli	environmental/food/other	CDC	2019	USA		CFSAN091028	missing	missing	GenomeTrakr	FDA Center for Food Safety and Applied Nutrition	SRR13160359	ECP19-798	473318585	1007158
PRJNA681235	SAMN16956340	Escherichia coli O157:H7	83334	Pathogen.env.1.0	Escherichia	PRJNA681235	CFSAN091030	coli	environmental/food/other	CDC	2019	USA		CFSAN091030	missing	missing	GenomeTrakr	FDA Center for Food Safety and Applied Nutrition	SRR13167188	ECP19-198	385043067	827691
PRJNA681235	SAMN17131267	Campylobacter jejuni	197	Pathogen.env.1.0						CDC	missing	missing	CFSAN091031		missing	missing	GenomeTrakr	FDA Center for Food Safety and Applied Nutrition		CJP19-D445		
PRJNA681235	SAMN17131268	Campylobacter jejuni	197	Pathogen.env.1.0						CDC	missing	missing	CFSAN091032		missing	missing	GenomeTrakr	FDA Center for Food Safety and Applied Nutrition		CJP19-D996