jpayne@0: <tool id="bio2srr" name="Bioproject to SRR" version="0.1.0">
jpayne@0: 	<description>Retrieve SRR accessions from BioProject or BioSample.</description>
jpayne@0:     <requirements>
jpayne@1:         <requirement type="package">package_python_3_4</requirement>
jpayne@0:     	<requirement type="package" version="2.18.4">requests</requirement>
jpayne@0:     </requirements>
jpayne@0:     <command detect_errors="exit_code"><![CDATA[
jpayne@0:         $__tool_directory__/bio2srr.py "$input1" > "$output"
jpayne@0:     ]]></command>
jpayne@0:     <inputs>
jpayne@0:         <param type="text" name="input1" label="BioProject or BioSample" />
jpayne@0:     </inputs>
jpayne@0:     <outputs>
jpayne@0:     	<data format="txt" name="output" />
jpayne@0:     </outputs>
jpayne@0:     <tests>
jpayne@0:     	<test>
jpayne@0:     		<param name="input1" value="NOTHING" />
jpayne@0:     		<output name="output" file="test.txt" />
jpayne@0:     	</test>
jpayne@0:     </tests>
jpayne@0:     <help><![CDATA[
jpayne@0:         Retrieve SRR accessions by BioSample or BioProject.
jpayne@0:     ]]></help>
jpayne@0:     <citations>
jpayne@0:     </citations>
jpayne@0: </tool>