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annotate test-data/Isolate_Data.tsv @ 0:1c1e01265e0f draft default tip

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planemo upload commit 7f3c6fb6db52daedaa0c59d6ca7f39710778f242-dirty
author jpayne
date Mon, 11 Aug 2025 15:46:24 +0000
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1c1e01265e0f planemo upload commit 7f3c6fb6db52daedaa0c59d6ca7f39710778f242-dirty
jpayne
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1 Isolate_ID Isolate_Type Assembly_Path Contig_Count Assembly_Bases N50 N90 L50 L90 SHA256
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2 Sample_A.fasta Reference /tmp/tmph6evuq6r/job_working_directory/000/16/working/references/Sample_A.fasta.fasta 50 4626313 285283 80168 7 20 dae2379030db9c465040198216d2976ef11fcea1a5739c2dc47950253842bd4b
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3 Sample_C Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_C.fasta 49 4668385 235009 69689 7 22 c4676142f6ab101d74ffea7d9315433ccaacee08df481f019cdc2cf29969f52b
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jpayne
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4 Sample_H Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_H.fasta 54 4728796 285283 57940 6 22 7f3d73397edee903cfea5b796e4f1a257cc50b63233dcb68a5379ec4fad22953
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jpayne
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5 Sample_D Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_D.fasta 55 4627990 238061 54649 7 23 0a8824d9ecda9632b817d421c082e8bf87b613a8032e6e41ce02fb8a8167d8c0
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jpayne
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6 Sample_O Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_O.fasta 83 4623444 104612 43315 13 40 cbcc76d3c8bd2e8c61daeb1abeeab82b5f6285b1b52ec3211252fe8fa721df78
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jpayne
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7 Sample_K Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_K.fasta 38 4632444 259526 83199 6 16 eb45e2ad3c47422df1d3bb56c8900d89daf2e623e00389a94d77f2099e6288ff
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8 Sample_M Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_M.fasta 805 4587464 11490 2756 113 423 43cb745a1d68479c4c5478bc92d6dbe3c8c999be665ce6394243b7b659a7fa1f
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jpayne
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9 Sample_L Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_L.fasta 61 4627094 169488 51870 9 27 c0c473f21eb8c605b2bd77299e5cbff8d7e6944d62937f0202efb6425f7a1f2c
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10 Sample_G Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_G.fasta 254 4584986 41813 13112 38 110 aae3a07d055bff2fa66127ca77cae35dd5cce5cc42dafea481787d4010c7dbef
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11 Sample_I Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_I.fasta 47 4668267 222472 69687 7 21 e05093575566fd4d00f1e50534435fc38b757b0f26ff73c3046ac9f436fd6208
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12 Sample_J Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_J.fasta 170 4730789 55413 21547 28 79 f4b68669533ce36a0f19f97ed11ffa0ea40daa27767f9b094cca7d4ffff53225
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13 Sample_N Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_N.fasta 63 4667287 173213 40058 8 27 d32b34cc2dd9824e5381b505505ff44d510d4e9d5e7352eab60ec2878d3a688b
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jpayne
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14 Sample_B Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_B.fasta 40 4631086 285283 87355 6 17 2486ab6c17c1c7997a5707111aa8e2cac41c578382aff413fa66086a31fbde38
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jpayne
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15 Sample_F Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_F.fasta 275 4582721 36325 11886 40 120 1f9e26d3f5ea00ac336292f5877077fcf74f8fbfa13c7e64c594f9808fd392ef
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jpayne
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16 Sample_E Query /tmp/tmph6evuq6r/job_working_directory/000/16/working/queries/Sample_E.fasta 84 4624417 95783 45157 16 43 342f8303aafabca5c3e3f175b975cab322eb91fa1f0aabb72340f07bd4740623