Mercurial > repos > jpayne > refchooser

annotate test-data/test/identify/example.fasta @ 0:91bc7378c1c5 draft

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planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
author jpayne
date Mon, 11 Aug 2025 15:37:26 +0000
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91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
jpayne
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1 >contig00071 len=545 cov=151.8 corr=0 origname=Contig_8_151.781 sw=shovill-skesa/1.1.0 date=20241107
91bc7378c1c5 planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
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2 ACATCTGGTATCCATTGCCGGATGGTTCGCTGTATGTCGGCGGTGCAGAAAAGGCGCTGT
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3 TTGCCGGACGCCCGGTAGAAATCCCGGCAGAGTTCAGCCAGGGAACGGCGGGCGGTAATT
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4 CCATGACATTGCCGGTGATCCAGAGTCTTCGTCCGGGCGTGGACGTGAACGGGGAACGCG
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5 TGACCAAAGTTCATCTGGCGAATGACACAATGACCATCACGTGGACACCACGGAACCGCG
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6 CCACAGGTCAACCATTGCAGAAAACACCGGCGCAGCGTCAGATAGAAAGCCATTACCCGG
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7 AACTGGCTTCAGGTCTTCACCTGCCCAAACTGGCCAGGGTGGTGGCACCCAGCGAGGCCG
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8 TAAAAAGCGGTAATTTTGCCGACCCGTTCCGGCCACGGTACGCCGTTGACGTGCAGCTGC
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9 TTGACGCGGACGGCAACCCGGATAACCAGACGCCGGTATATTCCGCTGTACCGCTGCCGG
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10 TGCCAATGGCCGGTAACGATTCGGGAATGTTCCAGTTTCCACCGGAAGGAACGCTGGTAG
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11 AGGTG
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12 >contig00072 len=543 cov=106.6 corr=0 origname=Contig_28_106.627 sw=shovill-skesa/1.1.0 date=20241107
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13 CATACAGCATTATGTGTTTGCGGTGGCGGGTATTGATGAAAACGGCAATATTACGGATTT
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14 ACGCCCGAAAGGGACGCTGAATGAGCAGCAGGCCAGCGATGCGCTGAGAAAACATGAACA
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15 ATCCCGTAATCATCCGGACGCCACAACCCGCGAAAAAGGGTTTGTGCAGTTAAGCAGTGA
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16 AACAAACAGCGATTCGGAGATGCTGGCCGCAACGCCGAAAGCGGTTAAAGCGGCTATGGA
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17 TAATGCGAACGGACGACTGGAGAAAAACAGTAATGGCGGCGATATTCCGGACAAAAAACA
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18 ATTTGCGAGAACTATCGGCGCGGTAACGTCGACCACCATTACACTTGGCGAATCAGGCTG
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19 GTTCAAAATCGCCACGGTTGTAATGCCGCAGTCCACATCAACAGCGGTAATTAAGCTTTA
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20 TGGAGGTTCGGGGTATAACGTTGGATCATTTGAGCAAGCGGCAATCAGTGAACTGGTACT
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21 GCGTGCCGGTAATGGTTCACCTGTTGGAATAACCGCCACATTATGGAGGCGTTCACCTTC
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22 TGC
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23 >contig00073 len=524 cov=155.9 corr=0 origname=Contig_22_155.913 sw=shovill-skesa/1.1.0 date=20241107
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24 ATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGG
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25 GTCCCAATGGGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATA
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26 GTTTTCGCGCCCAAATACCGAAGACAAGCGTTCTATGGAGAGAAGCGTAGGGCAGTAGGC
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27 AGCATATTAAGAAAATTGTGTGAATGGAAAAACGTACGAATTCTGGAAGCAGAATGTTGT
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28 GCAGATCATATTCACATGCTTCTGGAGATCCCGCCGAAGATGAGTGTGTCGAGTTTCATG
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29 GGATATCTGAAGGGTAAAAGTAGTCTGATGCTTTACGAGCAGTTTGGGGATCTAAAATTC
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30 AAATACAGGAACAGGGAGTTCTGGTGCAGAGGGTACTATGTCGATACGGTGGGTAAGAAC
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31 ACGGCGAAGATACAGGACTACATAAAGCACCAGCTTGAAGAGGATAAAATGGGTGAGCAA
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32 TTATCGATCCCGTATCCGGGCAGCCCGTTTACGGGCCGTAAGTA
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33 >contig00074 len=482 cov=192.6 corr=0 origname=Contig_11_192.645 sw=shovill-skesa/1.1.0 date=20241107
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34 AGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGG
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35 AATTACTGGGCGTAAAGCGCACGCAGGCGGTCTGTCAAGTCGGATGTGAAATCCCCGGGC
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36 TCAACCTGGGAACTGCATTCGAAACTGGCAGGCTTGAGTCTTGTAGAGGGGGGTAGAATT
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37 CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCC
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38 CTGGACAAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT
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39 GGTAGTCCACGCCGTAAACGATGTCTACTTGGAGGTTGTGCCCTTGAGGCGTGGCTTCCG
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40 GAGCTAACGCGTTAAGTAGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGA
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41 ATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA
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42 CC
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43 >contig00075 len=470 cov=113.9 corr=0 origname=Contig_78_113.92 sw=shovill-skesa/1.1.0 date=20241107
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44 TTTGAAGATATGGCCAATGAAGAAGGGCTGGCCGGTGAGTTTTACACTATCACCGCGCCA
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45 TCTCGTTTCCATGCGGTACACAGCAAAGGGGGCTTTGTATCGCAATGGGATGGAAGTACG
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46 CCGCAGGATACCCAGCGCTATTTATGTGGCGTATGGGCAAAAGCCCGCGCCGCGATCTCG
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47 CGTGCGGGTATCCATGTATTTGGGTTCAGGGTTGTCGAACCTCACCATGACGGGACACCG
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48 CACTGGCATATGTTGCTGTTCATGCGCCCGCAGGACGTGGACACGGTGCGAGATATTCTT
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49 TGTTATCACGCCAGAATTACCGATTCCGAAGAACTGCAAACGCCAAATGCGCTAAAGGCA
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50 CGTTTCCATGTTGAAGCCATCGATCCCGCTAAAGGGTCAGCGACGGGCTACATCGCCAAA
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51 TACATTTCCAAAAACATTGATGGATTCGCGCTGGATGGCGAGCAGGACGA
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52 >contig00076 len=417 cov=130.8 corr=0 origname=Contig_4_130.793 sw=shovill-skesa/1.1.0 date=20241107
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53 AAAGATGCTGCGGAACTGTTGAATGCGTATCTTGAAATTTATGGTCAGTGCGCAGCACGC
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54 CATAATCAGTTAATAGATGAAATTAATCGTAGAGAGAGTCTTTTATATGGAAAAAATTAA
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55 ACTGTGTGTCTGTGGGACTGATATTATTTTTGAACCAAATCAGACCGCCTATAATAAGTT
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56 TATTAATGAAATGGCAATGGACAATAAAGTGGCACCTGCGCATAACTACCTGACGCGTAT
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57 TGTTGCAACGGAAAGCAAGGAAGCTTTAGCTGAAATATTAAAACGTCCGGGCGCTGCGCT
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58 TCAGCTTGTCAGTAAGGTTAATGATATTTACGCCCCTGAACTGGAAATTGAAGTAAAAAA
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59 CTGACAAAGCGAGTCCGGGCAATTGAACAGAACGGACTCGAACAATATTTAATACTT
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60 >contig00077 len=370 cov=274.2 corr=0 origname=Contig_27_274.194 sw=shovill-skesa/1.1.0 date=20241107
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61 CAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGG
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62 GCTACACACGTGCTACAATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGAC
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63 CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAAT
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64 CGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCG
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65 CCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCG
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66 CTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACC
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67 TGCGGTTGGA
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68 >contig00078 len=352 cov=130.9 corr=0 origname=Contig_73_130.895 sw=shovill-skesa/1.1.0 date=20241107
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69 TTCTCCTGAAAAAAAGCGGTCAGGCTTTGGATCTGCGTCTGGCTCATACTTTTTTCACCG
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70 TTGCCCGTTTAAGCCCCTTCATGCGACGGATCACCACGGACGCCTCAGCCAGTAACCCGG
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71 CCCGTGTCTCCTGGCTTTCCTGCCCCGGATGGGTATCACGCCGTCCGATAGTGGCGAACT
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72 CACCCAACAGATCCGCTTTTGCCCTGGCAAAAACGGCTTTCATGTACTGGGCGCACAGGC
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73 TGTTAAGTCCGCCCATCTTTACACCCGGCACATCTGCCGCCAGCGTATGGCCTTTCGCTT
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74 TCCAGCTGGCCTCCACGTTTTCCAGCTCGGCATTCACCTCCGCGACAGCGGC
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75 >contig00079 len=350 cov=131.8 corr=0 origname=Contig_52_131.758 sw=shovill-skesa/1.1.0 date=20241107
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76 GATACCCTACTGTCAGAACCGACTATCGTGCTGGACAACACGGACGACAGCGGAACAAAA
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77 GGCGATAACCTGACCAACGTAAATAAGCCGACGTTTTTACTGGGCAATATTGACGCAGAC
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78 GCGCGGTATGTCACGGTTGAGGTGCAGCATGGCGGCACGAAAGAAGTGCTGACGGCCACC
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79 AAAGACGCGACCGGCAACTGGAGCGTGACACCGACCGGCACATGGGCAGATGGCGACTAT
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80 ACGCTGACGGTGAGGGTGGAAGATGAGGCGGGGAACGAAAAACACTCAGCGTCGCTGACG
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81 GTCACTGTTGATACCCAAATCACCATTGATGCTATTGAACTGGTTAATGA
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82 >contig00080 len=340 cov=103.7 corr=0 origname=Contig_79_103.706 sw=shovill-skesa/1.1.0 date=20241107
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83 TTTTCGTAACGACAGCCAAAATACCCTGCTAACCAGTCGGGTATTTCATGCAGGTATTGA
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84 GCACGCCATTTATGATCCTGCGGGTTTACAGCCCACAGGCGGCGCTCCGTGATTGTCACG
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85 TCTGCCGGTGTACCTGGCGCGAAGGTTTCACGCCGCCAGGCATCAACGGCGTAGCAATCT
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86 TCGTTTATTGCCAGCGTCATGCGCTGGCCTCAGGATTCGTCGGTAAAGGCCATTTAAGTA
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87 TCAGTTCTGCCGCCATTTTCGGGCTTGCAGCTGCCGCACCAACACTACGCGGCGCATTAA
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88 CCTTTAAGGCTTCAAACCCTGCATAAAGGTAATGCACCAT