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comparison test-data/test/resistance/NCTC11351_resfinder/resfinder.json @ 0:91bc7378c1c5 draft

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planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
author jpayne
date Mon, 11 Aug 2025 15:37:26 +0000
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1 {"type": "software_result", "databases": {"ResFinder-2.4.0": {"type": "database", "database_name": "ResFinder", "database_version": "2.4.0", "key": "ResFinder-2.4.0", "database_commit": "unknown"}}, "seq_regions": {}, "seq_variations": {}, "phenotypes": {"gentamicin": {"type": "phenotype", "amr_classes": ["aminoglycoside"], "seq_regions": [], "seq_variations": [], "ref_database": [], "category": "amr", "key": "gentamicin", "amr_resistance": "gentamicin", "amr_resistant": false, "amr_species_relevant": true, "grade": 0}, "tobramycin": {"type": "phenotype", "amr_classes": ["aminoglycoside"], "seq_regions": [], "seq_variations": [], "ref_database": [], "category": "amr", "key": "tobramycin", "amr_resistance": "tobramycin", "amr_resistant": false, "amr_species_relevant": false, "grade": 0}, "streptomycin": {"type": "phenotype", "amr_classes": ["aminoglycoside"], "seq_regions": [], "seq_variations": [], "ref_database": [], "category": "amr", "key": "streptomycin", "amr_resistance": "streptomycin", "amr_resistant": false, "amr_species_relevant": true, "grade": 0}, "amikacin": {"type": "phenotype", "amr_classes": ["aminoglycoside"], "seq_regions": [], "seq_variations": [], "ref_database": [], "category": "amr", "key": "amikacin", "amr_resistance": "amikacin", "amr_resistant": false, "amr_species_relevant": false, "grade": 0}, "isepamicin": {"type": "phenotype", "amr_classes": ["aminoglycoside"], "seq_regions": [], "seq_variations": [], "ref_database": [], "category": "amr", "key": "isepamicin", "amr_resistance": "isepamicin", "amr_resistant": false, "amr_species_relevant": false, "grade": 0}, "dibekacin": {"type": "phenotype", "amr_classes": ["aminoglycoside"], "seq_regions": [], "seq_variations": [], "ref_database": [], "category": "amr", "key": "dibekacin", "amr_resistance": "dibekacin", "amr_resistant": false, "amr_species_relevant": false, "grade": 0}, "kanamycin": {"type": "phenotype", "amr_classes": ["aminoglycoside"], "seq_regions": [], "seq_variations": [], 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