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comparison test-data/test/identify/example.fasta @ 1:dcf6c2409ebb draft default tip

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planemo upload commit 0afa3db59f582bebcb1aed2cc0f3dc2ade807d86-dirty
author jpayne
date Mon, 08 Dec 2025 20:28:57 +0000
parents 91bc7378c1c5
children
comparison
equal deleted inserted replaced
0:91bc7378c1c5 1:dcf6c2409ebb
1 >contig00071 len=545 cov=151.8 corr=0 origname=Contig_8_151.781 sw=shovill-skesa/1.1.0 date=20241107
2 ACATCTGGTATCCATTGCCGGATGGTTCGCTGTATGTCGGCGGTGCAGAAAAGGCGCTGT
3 TTGCCGGACGCCCGGTAGAAATCCCGGCAGAGTTCAGCCAGGGAACGGCGGGCGGTAATT
4 CCATGACATTGCCGGTGATCCAGAGTCTTCGTCCGGGCGTGGACGTGAACGGGGAACGCG
5 TGACCAAAGTTCATCTGGCGAATGACACAATGACCATCACGTGGACACCACGGAACCGCG
6 CCACAGGTCAACCATTGCAGAAAACACCGGCGCAGCGTCAGATAGAAAGCCATTACCCGG
7 AACTGGCTTCAGGTCTTCACCTGCCCAAACTGGCCAGGGTGGTGGCACCCAGCGAGGCCG
8 TAAAAAGCGGTAATTTTGCCGACCCGTTCCGGCCACGGTACGCCGTTGACGTGCAGCTGC
9 TTGACGCGGACGGCAACCCGGATAACCAGACGCCGGTATATTCCGCTGTACCGCTGCCGG
10 TGCCAATGGCCGGTAACGATTCGGGAATGTTCCAGTTTCCACCGGAAGGAACGCTGGTAG
11 AGGTG
12 >contig00072 len=543 cov=106.6 corr=0 origname=Contig_28_106.627 sw=shovill-skesa/1.1.0 date=20241107
13 CATACAGCATTATGTGTTTGCGGTGGCGGGTATTGATGAAAACGGCAATATTACGGATTT
14 ACGCCCGAAAGGGACGCTGAATGAGCAGCAGGCCAGCGATGCGCTGAGAAAACATGAACA
15 ATCCCGTAATCATCCGGACGCCACAACCCGCGAAAAAGGGTTTGTGCAGTTAAGCAGTGA
16 AACAAACAGCGATTCGGAGATGCTGGCCGCAACGCCGAAAGCGGTTAAAGCGGCTATGGA
17 TAATGCGAACGGACGACTGGAGAAAAACAGTAATGGCGGCGATATTCCGGACAAAAAACA
18 ATTTGCGAGAACTATCGGCGCGGTAACGTCGACCACCATTACACTTGGCGAATCAGGCTG
19 GTTCAAAATCGCCACGGTTGTAATGCCGCAGTCCACATCAACAGCGGTAATTAAGCTTTA
20 TGGAGGTTCGGGGTATAACGTTGGATCATTTGAGCAAGCGGCAATCAGTGAACTGGTACT
21 GCGTGCCGGTAATGGTTCACCTGTTGGAATAACCGCCACATTATGGAGGCGTTCACCTTC
22 TGC
23 >contig00073 len=524 cov=155.9 corr=0 origname=Contig_22_155.913 sw=shovill-skesa/1.1.0 date=20241107
24 ATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGG
25 GTCCCAATGGGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATA
26 GTTTTCGCGCCCAAATACCGAAGACAAGCGTTCTATGGAGAGAAGCGTAGGGCAGTAGGC
27 AGCATATTAAGAAAATTGTGTGAATGGAAAAACGTACGAATTCTGGAAGCAGAATGTTGT
28 GCAGATCATATTCACATGCTTCTGGAGATCCCGCCGAAGATGAGTGTGTCGAGTTTCATG
29 GGATATCTGAAGGGTAAAAGTAGTCTGATGCTTTACGAGCAGTTTGGGGATCTAAAATTC
30 AAATACAGGAACAGGGAGTTCTGGTGCAGAGGGTACTATGTCGATACGGTGGGTAAGAAC
31 ACGGCGAAGATACAGGACTACATAAAGCACCAGCTTGAAGAGGATAAAATGGGTGAGCAA
32 TTATCGATCCCGTATCCGGGCAGCCCGTTTACGGGCCGTAAGTA
33 >contig00074 len=482 cov=192.6 corr=0 origname=Contig_11_192.645 sw=shovill-skesa/1.1.0 date=20241107
34 AGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGG
35 AATTACTGGGCGTAAAGCGCACGCAGGCGGTCTGTCAAGTCGGATGTGAAATCCCCGGGC
36 TCAACCTGGGAACTGCATTCGAAACTGGCAGGCTTGAGTCTTGTAGAGGGGGGTAGAATT
37 CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCC
38 CTGGACAAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT
39 GGTAGTCCACGCCGTAAACGATGTCTACTTGGAGGTTGTGCCCTTGAGGCGTGGCTTCCG
40 GAGCTAACGCGTTAAGTAGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGA
41 ATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA
42 CC
43 >contig00075 len=470 cov=113.9 corr=0 origname=Contig_78_113.92 sw=shovill-skesa/1.1.0 date=20241107
44 TTTGAAGATATGGCCAATGAAGAAGGGCTGGCCGGTGAGTTTTACACTATCACCGCGCCA
45 TCTCGTTTCCATGCGGTACACAGCAAAGGGGGCTTTGTATCGCAATGGGATGGAAGTACG
46 CCGCAGGATACCCAGCGCTATTTATGTGGCGTATGGGCAAAAGCCCGCGCCGCGATCTCG
47 CGTGCGGGTATCCATGTATTTGGGTTCAGGGTTGTCGAACCTCACCATGACGGGACACCG
48 CACTGGCATATGTTGCTGTTCATGCGCCCGCAGGACGTGGACACGGTGCGAGATATTCTT
49 TGTTATCACGCCAGAATTACCGATTCCGAAGAACTGCAAACGCCAAATGCGCTAAAGGCA
50 CGTTTCCATGTTGAAGCCATCGATCCCGCTAAAGGGTCAGCGACGGGCTACATCGCCAAA
51 TACATTTCCAAAAACATTGATGGATTCGCGCTGGATGGCGAGCAGGACGA
52 >contig00076 len=417 cov=130.8 corr=0 origname=Contig_4_130.793 sw=shovill-skesa/1.1.0 date=20241107
53 AAAGATGCTGCGGAACTGTTGAATGCGTATCTTGAAATTTATGGTCAGTGCGCAGCACGC
54 CATAATCAGTTAATAGATGAAATTAATCGTAGAGAGAGTCTTTTATATGGAAAAAATTAA
55 ACTGTGTGTCTGTGGGACTGATATTATTTTTGAACCAAATCAGACCGCCTATAATAAGTT
56 TATTAATGAAATGGCAATGGACAATAAAGTGGCACCTGCGCATAACTACCTGACGCGTAT
57 TGTTGCAACGGAAAGCAAGGAAGCTTTAGCTGAAATATTAAAACGTCCGGGCGCTGCGCT
58 TCAGCTTGTCAGTAAGGTTAATGATATTTACGCCCCTGAACTGGAAATTGAAGTAAAAAA
59 CTGACAAAGCGAGTCCGGGCAATTGAACAGAACGGACTCGAACAATATTTAATACTT
60 >contig00077 len=370 cov=274.2 corr=0 origname=Contig_27_274.194 sw=shovill-skesa/1.1.0 date=20241107
61 CAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGG
62 GCTACACACGTGCTACAATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGAC
63 CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAAT
64 CGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCG
65 CCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCG
66 CTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACC
67 TGCGGTTGGA
68 >contig00078 len=352 cov=130.9 corr=0 origname=Contig_73_130.895 sw=shovill-skesa/1.1.0 date=20241107
69 TTCTCCTGAAAAAAAGCGGTCAGGCTTTGGATCTGCGTCTGGCTCATACTTTTTTCACCG
70 TTGCCCGTTTAAGCCCCTTCATGCGACGGATCACCACGGACGCCTCAGCCAGTAACCCGG
71 CCCGTGTCTCCTGGCTTTCCTGCCCCGGATGGGTATCACGCCGTCCGATAGTGGCGAACT
72 CACCCAACAGATCCGCTTTTGCCCTGGCAAAAACGGCTTTCATGTACTGGGCGCACAGGC
73 TGTTAAGTCCGCCCATCTTTACACCCGGCACATCTGCCGCCAGCGTATGGCCTTTCGCTT
74 TCCAGCTGGCCTCCACGTTTTCCAGCTCGGCATTCACCTCCGCGACAGCGGC
75 >contig00079 len=350 cov=131.8 corr=0 origname=Contig_52_131.758 sw=shovill-skesa/1.1.0 date=20241107
76 GATACCCTACTGTCAGAACCGACTATCGTGCTGGACAACACGGACGACAGCGGAACAAAA
77 GGCGATAACCTGACCAACGTAAATAAGCCGACGTTTTTACTGGGCAATATTGACGCAGAC
78 GCGCGGTATGTCACGGTTGAGGTGCAGCATGGCGGCACGAAAGAAGTGCTGACGGCCACC
79 AAAGACGCGACCGGCAACTGGAGCGTGACACCGACCGGCACATGGGCAGATGGCGACTAT
80 ACGCTGACGGTGAGGGTGGAAGATGAGGCGGGGAACGAAAAACACTCAGCGTCGCTGACG
81 GTCACTGTTGATACCCAAATCACCATTGATGCTATTGAACTGGTTAATGA
82 >contig00080 len=340 cov=103.7 corr=0 origname=Contig_79_103.706 sw=shovill-skesa/1.1.0 date=20241107
83 TTTTCGTAACGACAGCCAAAATACCCTGCTAACCAGTCGGGTATTTCATGCAGGTATTGA
84 GCACGCCATTTATGATCCTGCGGGTTTACAGCCCACAGGCGGCGCTCCGTGATTGTCACG
85 TCTGCCGGTGTACCTGGCGCGAAGGTTTCACGCCGCCAGGCATCAACGGCGTAGCAATCT
86 TCGTTTATTGCCAGCGTCATGCGCTGGCCTCAGGATTCGTCGGTAAAGGCCATTTAAGTA
87 TCAGTTCTGCCGCCATTTTCGGGCTTGCAGCTGCCGCACCAACACTACGCGGCGCATTAA
88 CCTTTAAGGCTTCAAACCCTGCATAAAGGTAATGCACCAT