diff test-data/test/identify/example.fasta @ 0:91bc7378c1c5 draft

planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
author jpayne
date Mon, 11 Aug 2025 15:37:26 +0000
parents
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/test/identify/example.fasta	Mon Aug 11 15:37:26 2025 +0000
@@ -0,0 +1,88 @@
+>contig00071 len=545 cov=151.8 corr=0 origname=Contig_8_151.781 sw=shovill-skesa/1.1.0 date=20241107
+ACATCTGGTATCCATTGCCGGATGGTTCGCTGTATGTCGGCGGTGCAGAAAAGGCGCTGT
+TTGCCGGACGCCCGGTAGAAATCCCGGCAGAGTTCAGCCAGGGAACGGCGGGCGGTAATT
+CCATGACATTGCCGGTGATCCAGAGTCTTCGTCCGGGCGTGGACGTGAACGGGGAACGCG
+TGACCAAAGTTCATCTGGCGAATGACACAATGACCATCACGTGGACACCACGGAACCGCG
+CCACAGGTCAACCATTGCAGAAAACACCGGCGCAGCGTCAGATAGAAAGCCATTACCCGG
+AACTGGCTTCAGGTCTTCACCTGCCCAAACTGGCCAGGGTGGTGGCACCCAGCGAGGCCG
+TAAAAAGCGGTAATTTTGCCGACCCGTTCCGGCCACGGTACGCCGTTGACGTGCAGCTGC
+TTGACGCGGACGGCAACCCGGATAACCAGACGCCGGTATATTCCGCTGTACCGCTGCCGG
+TGCCAATGGCCGGTAACGATTCGGGAATGTTCCAGTTTCCACCGGAAGGAACGCTGGTAG
+AGGTG
+>contig00072 len=543 cov=106.6 corr=0 origname=Contig_28_106.627 sw=shovill-skesa/1.1.0 date=20241107
+CATACAGCATTATGTGTTTGCGGTGGCGGGTATTGATGAAAACGGCAATATTACGGATTT
+ACGCCCGAAAGGGACGCTGAATGAGCAGCAGGCCAGCGATGCGCTGAGAAAACATGAACA
+ATCCCGTAATCATCCGGACGCCACAACCCGCGAAAAAGGGTTTGTGCAGTTAAGCAGTGA
+AACAAACAGCGATTCGGAGATGCTGGCCGCAACGCCGAAAGCGGTTAAAGCGGCTATGGA
+TAATGCGAACGGACGACTGGAGAAAAACAGTAATGGCGGCGATATTCCGGACAAAAAACA
+ATTTGCGAGAACTATCGGCGCGGTAACGTCGACCACCATTACACTTGGCGAATCAGGCTG
+GTTCAAAATCGCCACGGTTGTAATGCCGCAGTCCACATCAACAGCGGTAATTAAGCTTTA
+TGGAGGTTCGGGGTATAACGTTGGATCATTTGAGCAAGCGGCAATCAGTGAACTGGTACT
+GCGTGCCGGTAATGGTTCACCTGTTGGAATAACCGCCACATTATGGAGGCGTTCACCTTC
+TGC
+>contig00073 len=524 cov=155.9 corr=0 origname=Contig_22_155.913 sw=shovill-skesa/1.1.0 date=20241107
+ATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGG
+GTCCCAATGGGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATA
+GTTTTCGCGCCCAAATACCGAAGACAAGCGTTCTATGGAGAGAAGCGTAGGGCAGTAGGC
+AGCATATTAAGAAAATTGTGTGAATGGAAAAACGTACGAATTCTGGAAGCAGAATGTTGT
+GCAGATCATATTCACATGCTTCTGGAGATCCCGCCGAAGATGAGTGTGTCGAGTTTCATG
+GGATATCTGAAGGGTAAAAGTAGTCTGATGCTTTACGAGCAGTTTGGGGATCTAAAATTC
+AAATACAGGAACAGGGAGTTCTGGTGCAGAGGGTACTATGTCGATACGGTGGGTAAGAAC
+ACGGCGAAGATACAGGACTACATAAAGCACCAGCTTGAAGAGGATAAAATGGGTGAGCAA
+TTATCGATCCCGTATCCGGGCAGCCCGTTTACGGGCCGTAAGTA
+>contig00074 len=482 cov=192.6 corr=0 origname=Contig_11_192.645 sw=shovill-skesa/1.1.0 date=20241107
+AGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGG
+AATTACTGGGCGTAAAGCGCACGCAGGCGGTCTGTCAAGTCGGATGTGAAATCCCCGGGC
+TCAACCTGGGAACTGCATTCGAAACTGGCAGGCTTGAGTCTTGTAGAGGGGGGTAGAATT
+CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCC
+CTGGACAAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT
+GGTAGTCCACGCCGTAAACGATGTCTACTTGGAGGTTGTGCCCTTGAGGCGTGGCTTCCG
+GAGCTAACGCGTTAAGTAGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGA
+ATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA
+CC
+>contig00075 len=470 cov=113.9 corr=0 origname=Contig_78_113.92 sw=shovill-skesa/1.1.0 date=20241107
+TTTGAAGATATGGCCAATGAAGAAGGGCTGGCCGGTGAGTTTTACACTATCACCGCGCCA
+TCTCGTTTCCATGCGGTACACAGCAAAGGGGGCTTTGTATCGCAATGGGATGGAAGTACG
+CCGCAGGATACCCAGCGCTATTTATGTGGCGTATGGGCAAAAGCCCGCGCCGCGATCTCG
+CGTGCGGGTATCCATGTATTTGGGTTCAGGGTTGTCGAACCTCACCATGACGGGACACCG
+CACTGGCATATGTTGCTGTTCATGCGCCCGCAGGACGTGGACACGGTGCGAGATATTCTT
+TGTTATCACGCCAGAATTACCGATTCCGAAGAACTGCAAACGCCAAATGCGCTAAAGGCA
+CGTTTCCATGTTGAAGCCATCGATCCCGCTAAAGGGTCAGCGACGGGCTACATCGCCAAA
+TACATTTCCAAAAACATTGATGGATTCGCGCTGGATGGCGAGCAGGACGA
+>contig00076 len=417 cov=130.8 corr=0 origname=Contig_4_130.793 sw=shovill-skesa/1.1.0 date=20241107
+AAAGATGCTGCGGAACTGTTGAATGCGTATCTTGAAATTTATGGTCAGTGCGCAGCACGC
+CATAATCAGTTAATAGATGAAATTAATCGTAGAGAGAGTCTTTTATATGGAAAAAATTAA
+ACTGTGTGTCTGTGGGACTGATATTATTTTTGAACCAAATCAGACCGCCTATAATAAGTT
+TATTAATGAAATGGCAATGGACAATAAAGTGGCACCTGCGCATAACTACCTGACGCGTAT
+TGTTGCAACGGAAAGCAAGGAAGCTTTAGCTGAAATATTAAAACGTCCGGGCGCTGCGCT
+TCAGCTTGTCAGTAAGGTTAATGATATTTACGCCCCTGAACTGGAAATTGAAGTAAAAAA
+CTGACAAAGCGAGTCCGGGCAATTGAACAGAACGGACTCGAACAATATTTAATACTT
+>contig00077 len=370 cov=274.2 corr=0 origname=Contig_27_274.194 sw=shovill-skesa/1.1.0 date=20241107
+CAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGG
+GCTACACACGTGCTACAATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGAC
+CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAAT
+CGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCG
+CCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCG
+CTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACC
+TGCGGTTGGA
+>contig00078 len=352 cov=130.9 corr=0 origname=Contig_73_130.895 sw=shovill-skesa/1.1.0 date=20241107
+TTCTCCTGAAAAAAAGCGGTCAGGCTTTGGATCTGCGTCTGGCTCATACTTTTTTCACCG
+TTGCCCGTTTAAGCCCCTTCATGCGACGGATCACCACGGACGCCTCAGCCAGTAACCCGG
+CCCGTGTCTCCTGGCTTTCCTGCCCCGGATGGGTATCACGCCGTCCGATAGTGGCGAACT
+CACCCAACAGATCCGCTTTTGCCCTGGCAAAAACGGCTTTCATGTACTGGGCGCACAGGC
+TGTTAAGTCCGCCCATCTTTACACCCGGCACATCTGCCGCCAGCGTATGGCCTTTCGCTT
+TCCAGCTGGCCTCCACGTTTTCCAGCTCGGCATTCACCTCCGCGACAGCGGC
+>contig00079 len=350 cov=131.8 corr=0 origname=Contig_52_131.758 sw=shovill-skesa/1.1.0 date=20241107
+GATACCCTACTGTCAGAACCGACTATCGTGCTGGACAACACGGACGACAGCGGAACAAAA
+GGCGATAACCTGACCAACGTAAATAAGCCGACGTTTTTACTGGGCAATATTGACGCAGAC
+GCGCGGTATGTCACGGTTGAGGTGCAGCATGGCGGCACGAAAGAAGTGCTGACGGCCACC
+AAAGACGCGACCGGCAACTGGAGCGTGACACCGACCGGCACATGGGCAGATGGCGACTAT
+ACGCTGACGGTGAGGGTGGAAGATGAGGCGGGGAACGAAAAACACTCAGCGTCGCTGACG
+GTCACTGTTGATACCCAAATCACCATTGATGCTATTGAACTGGTTAATGA
+>contig00080 len=340 cov=103.7 corr=0 origname=Contig_79_103.706 sw=shovill-skesa/1.1.0 date=20241107
+TTTTCGTAACGACAGCCAAAATACCCTGCTAACCAGTCGGGTATTTCATGCAGGTATTGA
+GCACGCCATTTATGATCCTGCGGGTTTACAGCCCACAGGCGGCGCTCCGTGATTGTCACG
+TCTGCCGGTGTACCTGGCGCGAAGGTTTCACGCCGCCAGGCATCAACGGCGTAGCAATCT
+TCGTTTATTGCCAGCGTCATGCGCTGGCCTCAGGATTCGTCGGTAAAGGCCATTTAAGTA
+TCAGTTCTGCCGCCATTTTCGGGCTTGCAGCTGCCGCACCAACACTACGCGGCGCATTAA
+CCTTTAAGGCTTCAAACCCTGCATAAAGGTAATGCACCAT
\ No newline at end of file