Mercurial > repos > jpayne > refchooser
diff test-data/test/identify/example.fasta @ 0:91bc7378c1c5 draft
planemo upload commit c5b9a5678302366ab392fc9b24104509beb07c38-dirty
| author | jpayne |
|---|---|
| date | Mon, 11 Aug 2025 15:37:26 +0000 |
| parents | |
| children |
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--- /dev/null Thu Jan 01 00:00:00 1970 +0000 +++ b/test-data/test/identify/example.fasta Mon Aug 11 15:37:26 2025 +0000 @@ -0,0 +1,88 @@ +>contig00071 len=545 cov=151.8 corr=0 origname=Contig_8_151.781 sw=shovill-skesa/1.1.0 date=20241107 +ACATCTGGTATCCATTGCCGGATGGTTCGCTGTATGTCGGCGGTGCAGAAAAGGCGCTGT +TTGCCGGACGCCCGGTAGAAATCCCGGCAGAGTTCAGCCAGGGAACGGCGGGCGGTAATT +CCATGACATTGCCGGTGATCCAGAGTCTTCGTCCGGGCGTGGACGTGAACGGGGAACGCG +TGACCAAAGTTCATCTGGCGAATGACACAATGACCATCACGTGGACACCACGGAACCGCG +CCACAGGTCAACCATTGCAGAAAACACCGGCGCAGCGTCAGATAGAAAGCCATTACCCGG +AACTGGCTTCAGGTCTTCACCTGCCCAAACTGGCCAGGGTGGTGGCACCCAGCGAGGCCG +TAAAAAGCGGTAATTTTGCCGACCCGTTCCGGCCACGGTACGCCGTTGACGTGCAGCTGC +TTGACGCGGACGGCAACCCGGATAACCAGACGCCGGTATATTCCGCTGTACCGCTGCCGG +TGCCAATGGCCGGTAACGATTCGGGAATGTTCCAGTTTCCACCGGAAGGAACGCTGGTAG +AGGTG +>contig00072 len=543 cov=106.6 corr=0 origname=Contig_28_106.627 sw=shovill-skesa/1.1.0 date=20241107 +CATACAGCATTATGTGTTTGCGGTGGCGGGTATTGATGAAAACGGCAATATTACGGATTT +ACGCCCGAAAGGGACGCTGAATGAGCAGCAGGCCAGCGATGCGCTGAGAAAACATGAACA +ATCCCGTAATCATCCGGACGCCACAACCCGCGAAAAAGGGTTTGTGCAGTTAAGCAGTGA +AACAAACAGCGATTCGGAGATGCTGGCCGCAACGCCGAAAGCGGTTAAAGCGGCTATGGA +TAATGCGAACGGACGACTGGAGAAAAACAGTAATGGCGGCGATATTCCGGACAAAAAACA +ATTTGCGAGAACTATCGGCGCGGTAACGTCGACCACCATTACACTTGGCGAATCAGGCTG +GTTCAAAATCGCCACGGTTGTAATGCCGCAGTCCACATCAACAGCGGTAATTAAGCTTTA +TGGAGGTTCGGGGTATAACGTTGGATCATTTGAGCAAGCGGCAATCAGTGAACTGGTACT +GCGTGCCGGTAATGGTTCACCTGTTGGAATAACCGCCACATTATGGAGGCGTTCACCTTC +TGC +>contig00073 len=524 cov=155.9 corr=0 origname=Contig_22_155.913 sw=shovill-skesa/1.1.0 date=20241107 +ATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGG +GTCCCAATGGGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATA +GTTTTCGCGCCCAAATACCGAAGACAAGCGTTCTATGGAGAGAAGCGTAGGGCAGTAGGC +AGCATATTAAGAAAATTGTGTGAATGGAAAAACGTACGAATTCTGGAAGCAGAATGTTGT +GCAGATCATATTCACATGCTTCTGGAGATCCCGCCGAAGATGAGTGTGTCGAGTTTCATG +GGATATCTGAAGGGTAAAAGTAGTCTGATGCTTTACGAGCAGTTTGGGGATCTAAAATTC +AAATACAGGAACAGGGAGTTCTGGTGCAGAGGGTACTATGTCGATACGGTGGGTAAGAAC +ACGGCGAAGATACAGGACTACATAAAGCACCAGCTTGAAGAGGATAAAATGGGTGAGCAA +TTATCGATCCCGTATCCGGGCAGCCCGTTTACGGGCCGTAAGTA +>contig00074 len=482 cov=192.6 corr=0 origname=Contig_11_192.645 sw=shovill-skesa/1.1.0 date=20241107 +AGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGG +AATTACTGGGCGTAAAGCGCACGCAGGCGGTCTGTCAAGTCGGATGTGAAATCCCCGGGC +TCAACCTGGGAACTGCATTCGAAACTGGCAGGCTTGAGTCTTGTAGAGGGGGGTAGAATT +CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCC +CTGGACAAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT +GGTAGTCCACGCCGTAAACGATGTCTACTTGGAGGTTGTGCCCTTGAGGCGTGGCTTCCG +GAGCTAACGCGTTAAGTAGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGA +ATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA +CC +>contig00075 len=470 cov=113.9 corr=0 origname=Contig_78_113.92 sw=shovill-skesa/1.1.0 date=20241107 +TTTGAAGATATGGCCAATGAAGAAGGGCTGGCCGGTGAGTTTTACACTATCACCGCGCCA +TCTCGTTTCCATGCGGTACACAGCAAAGGGGGCTTTGTATCGCAATGGGATGGAAGTACG +CCGCAGGATACCCAGCGCTATTTATGTGGCGTATGGGCAAAAGCCCGCGCCGCGATCTCG +CGTGCGGGTATCCATGTATTTGGGTTCAGGGTTGTCGAACCTCACCATGACGGGACACCG +CACTGGCATATGTTGCTGTTCATGCGCCCGCAGGACGTGGACACGGTGCGAGATATTCTT +TGTTATCACGCCAGAATTACCGATTCCGAAGAACTGCAAACGCCAAATGCGCTAAAGGCA +CGTTTCCATGTTGAAGCCATCGATCCCGCTAAAGGGTCAGCGACGGGCTACATCGCCAAA +TACATTTCCAAAAACATTGATGGATTCGCGCTGGATGGCGAGCAGGACGA +>contig00076 len=417 cov=130.8 corr=0 origname=Contig_4_130.793 sw=shovill-skesa/1.1.0 date=20241107 +AAAGATGCTGCGGAACTGTTGAATGCGTATCTTGAAATTTATGGTCAGTGCGCAGCACGC +CATAATCAGTTAATAGATGAAATTAATCGTAGAGAGAGTCTTTTATATGGAAAAAATTAA +ACTGTGTGTCTGTGGGACTGATATTATTTTTGAACCAAATCAGACCGCCTATAATAAGTT +TATTAATGAAATGGCAATGGACAATAAAGTGGCACCTGCGCATAACTACCTGACGCGTAT +TGTTGCAACGGAAAGCAAGGAAGCTTTAGCTGAAATATTAAAACGTCCGGGCGCTGCGCT +TCAGCTTGTCAGTAAGGTTAATGATATTTACGCCCCTGAACTGGAAATTGAAGTAAAAAA +CTGACAAAGCGAGTCCGGGCAATTGAACAGAACGGACTCGAACAATATTTAATACTT +>contig00077 len=370 cov=274.2 corr=0 origname=Contig_27_274.194 sw=shovill-skesa/1.1.0 date=20241107 +CAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGG +GCTACACACGTGCTACAATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGAC +CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAAT +CGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCG +CCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCG +CTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACC +TGCGGTTGGA +>contig00078 len=352 cov=130.9 corr=0 origname=Contig_73_130.895 sw=shovill-skesa/1.1.0 date=20241107 +TTCTCCTGAAAAAAAGCGGTCAGGCTTTGGATCTGCGTCTGGCTCATACTTTTTTCACCG +TTGCCCGTTTAAGCCCCTTCATGCGACGGATCACCACGGACGCCTCAGCCAGTAACCCGG +CCCGTGTCTCCTGGCTTTCCTGCCCCGGATGGGTATCACGCCGTCCGATAGTGGCGAACT +CACCCAACAGATCCGCTTTTGCCCTGGCAAAAACGGCTTTCATGTACTGGGCGCACAGGC +TGTTAAGTCCGCCCATCTTTACACCCGGCACATCTGCCGCCAGCGTATGGCCTTTCGCTT +TCCAGCTGGCCTCCACGTTTTCCAGCTCGGCATTCACCTCCGCGACAGCGGC +>contig00079 len=350 cov=131.8 corr=0 origname=Contig_52_131.758 sw=shovill-skesa/1.1.0 date=20241107 +GATACCCTACTGTCAGAACCGACTATCGTGCTGGACAACACGGACGACAGCGGAACAAAA +GGCGATAACCTGACCAACGTAAATAAGCCGACGTTTTTACTGGGCAATATTGACGCAGAC +GCGCGGTATGTCACGGTTGAGGTGCAGCATGGCGGCACGAAAGAAGTGCTGACGGCCACC +AAAGACGCGACCGGCAACTGGAGCGTGACACCGACCGGCACATGGGCAGATGGCGACTAT +ACGCTGACGGTGAGGGTGGAAGATGAGGCGGGGAACGAAAAACACTCAGCGTCGCTGACG +GTCACTGTTGATACCCAAATCACCATTGATGCTATTGAACTGGTTAATGA +>contig00080 len=340 cov=103.7 corr=0 origname=Contig_79_103.706 sw=shovill-skesa/1.1.0 date=20241107 +TTTTCGTAACGACAGCCAAAATACCCTGCTAACCAGTCGGGTATTTCATGCAGGTATTGA +GCACGCCATTTATGATCCTGCGGGTTTACAGCCCACAGGCGGCGCTCCGTGATTGTCACG +TCTGCCGGTGTACCTGGCGCGAAGGTTTCACGCCGCCAGGCATCAACGGCGTAGCAATCT +TCGTTTATTGCCAGCGTCATGCGCTGGCCTCAGGATTCGTCGGTAAAGGCCATTTAAGTA +TCAGTTCTGCCGCCATTTTCGGGCTTGCAGCTGCCGCACCAACACTACGCGGCGCATTAA +CCTTTAAGGCTTCAAACCCTGCATAAAGGTAATGCACCAT \ No newline at end of file
