Mercurial > repos > jpayne > refchooser
diff test-data/test/identify/example.fasta @ 1:dcf6c2409ebb draft default tip
planemo upload commit 0afa3db59f582bebcb1aed2cc0f3dc2ade807d86-dirty
| author | jpayne |
|---|---|
| date | Mon, 08 Dec 2025 20:28:57 +0000 |
| parents | 91bc7378c1c5 |
| children |
line wrap: on
line diff
--- a/test-data/test/identify/example.fasta Mon Aug 11 15:37:26 2025 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,88 +0,0 @@ ->contig00071 len=545 cov=151.8 corr=0 origname=Contig_8_151.781 sw=shovill-skesa/1.1.0 date=20241107 -ACATCTGGTATCCATTGCCGGATGGTTCGCTGTATGTCGGCGGTGCAGAAAAGGCGCTGT -TTGCCGGACGCCCGGTAGAAATCCCGGCAGAGTTCAGCCAGGGAACGGCGGGCGGTAATT -CCATGACATTGCCGGTGATCCAGAGTCTTCGTCCGGGCGTGGACGTGAACGGGGAACGCG -TGACCAAAGTTCATCTGGCGAATGACACAATGACCATCACGTGGACACCACGGAACCGCG -CCACAGGTCAACCATTGCAGAAAACACCGGCGCAGCGTCAGATAGAAAGCCATTACCCGG -AACTGGCTTCAGGTCTTCACCTGCCCAAACTGGCCAGGGTGGTGGCACCCAGCGAGGCCG -TAAAAAGCGGTAATTTTGCCGACCCGTTCCGGCCACGGTACGCCGTTGACGTGCAGCTGC -TTGACGCGGACGGCAACCCGGATAACCAGACGCCGGTATATTCCGCTGTACCGCTGCCGG -TGCCAATGGCCGGTAACGATTCGGGAATGTTCCAGTTTCCACCGGAAGGAACGCTGGTAG -AGGTG ->contig00072 len=543 cov=106.6 corr=0 origname=Contig_28_106.627 sw=shovill-skesa/1.1.0 date=20241107 -CATACAGCATTATGTGTTTGCGGTGGCGGGTATTGATGAAAACGGCAATATTACGGATTT -ACGCCCGAAAGGGACGCTGAATGAGCAGCAGGCCAGCGATGCGCTGAGAAAACATGAACA -ATCCCGTAATCATCCGGACGCCACAACCCGCGAAAAAGGGTTTGTGCAGTTAAGCAGTGA -AACAAACAGCGATTCGGAGATGCTGGCCGCAACGCCGAAAGCGGTTAAAGCGGCTATGGA -TAATGCGAACGGACGACTGGAGAAAAACAGTAATGGCGGCGATATTCCGGACAAAAAACA -ATTTGCGAGAACTATCGGCGCGGTAACGTCGACCACCATTACACTTGGCGAATCAGGCTG -GTTCAAAATCGCCACGGTTGTAATGCCGCAGTCCACATCAACAGCGGTAATTAAGCTTTA -TGGAGGTTCGGGGTATAACGTTGGATCATTTGAGCAAGCGGCAATCAGTGAACTGGTACT -GCGTGCCGGTAATGGTTCACCTGTTGGAATAACCGCCACATTATGGAGGCGTTCACCTTC -TGC ->contig00073 len=524 cov=155.9 corr=0 origname=Contig_22_155.913 sw=shovill-skesa/1.1.0 date=20241107 -ATTTGTTAAAACATCTTGCGGTCTGGCAACTGCAAAAGTTCAACAAGAAATCAAAAGGGG -GTCCCAATGGGGGACGAAAAGAGCTTAGCGCACACCCGATGGAACTGTAAATATCACATA -GTTTTCGCGCCCAAATACCGAAGACAAGCGTTCTATGGAGAGAAGCGTAGGGCAGTAGGC -AGCATATTAAGAAAATTGTGTGAATGGAAAAACGTACGAATTCTGGAAGCAGAATGTTGT -GCAGATCATATTCACATGCTTCTGGAGATCCCGCCGAAGATGAGTGTGTCGAGTTTCATG -GGATATCTGAAGGGTAAAAGTAGTCTGATGCTTTACGAGCAGTTTGGGGATCTAAAATTC -AAATACAGGAACAGGGAGTTCTGGTGCAGAGGGTACTATGTCGATACGGTGGGTAAGAAC -ACGGCGAAGATACAGGACTACATAAAGCACCAGCTTGAAGAGGATAAAATGGGTGAGCAA -TTATCGATCCCGTATCCGGGCAGCCCGTTTACGGGCCGTAAGTA ->contig00074 len=482 cov=192.6 corr=0 origname=Contig_11_192.645 sw=shovill-skesa/1.1.0 date=20241107 -AGCACCGGCTAACTCCGTGCCAGCAGCCGCGGTAATACGGAGGGTGCAAGCGTTAATCGG -AATTACTGGGCGTAAAGCGCACGCAGGCGGTCTGTCAAGTCGGATGTGAAATCCCCGGGC -TCAACCTGGGAACTGCATTCGAAACTGGCAGGCTTGAGTCTTGTAGAGGGGGGTAGAATT -CCAGGTGTAGCGGTGAAATGCGTAGAGATCTGGAGGAATACCGGTGGCGAAGGCGGCCCC -CTGGACAAAGACTGACGCTCAGGTGCGAAAGCGTGGGGAGCAAACAGGATTAGATACCCT -GGTAGTCCACGCCGTAAACGATGTCTACTTGGAGGTTGTGCCCTTGAGGCGTGGCTTCCG -GAGCTAACGCGTTAAGTAGACCGCCTGGGGAGTACGGCCGCAAGGTTAAAACTCAAATGA -ATTGACGGGGGCCCGCACAAGCGGTGGAGCATGTGGTTTAATTCGATGCAACGCGAAGAA -CC ->contig00075 len=470 cov=113.9 corr=0 origname=Contig_78_113.92 sw=shovill-skesa/1.1.0 date=20241107 -TTTGAAGATATGGCCAATGAAGAAGGGCTGGCCGGTGAGTTTTACACTATCACCGCGCCA -TCTCGTTTCCATGCGGTACACAGCAAAGGGGGCTTTGTATCGCAATGGGATGGAAGTACG -CCGCAGGATACCCAGCGCTATTTATGTGGCGTATGGGCAAAAGCCCGCGCCGCGATCTCG -CGTGCGGGTATCCATGTATTTGGGTTCAGGGTTGTCGAACCTCACCATGACGGGACACCG -CACTGGCATATGTTGCTGTTCATGCGCCCGCAGGACGTGGACACGGTGCGAGATATTCTT -TGTTATCACGCCAGAATTACCGATTCCGAAGAACTGCAAACGCCAAATGCGCTAAAGGCA -CGTTTCCATGTTGAAGCCATCGATCCCGCTAAAGGGTCAGCGACGGGCTACATCGCCAAA -TACATTTCCAAAAACATTGATGGATTCGCGCTGGATGGCGAGCAGGACGA ->contig00076 len=417 cov=130.8 corr=0 origname=Contig_4_130.793 sw=shovill-skesa/1.1.0 date=20241107 -AAAGATGCTGCGGAACTGTTGAATGCGTATCTTGAAATTTATGGTCAGTGCGCAGCACGC -CATAATCAGTTAATAGATGAAATTAATCGTAGAGAGAGTCTTTTATATGGAAAAAATTAA -ACTGTGTGTCTGTGGGACTGATATTATTTTTGAACCAAATCAGACCGCCTATAATAAGTT -TATTAATGAAATGGCAATGGACAATAAAGTGGCACCTGCGCATAACTACCTGACGCGTAT -TGTTGCAACGGAAAGCAAGGAAGCTTTAGCTGAAATATTAAAACGTCCGGGCGCTGCGCT -TCAGCTTGTCAGTAAGGTTAATGATATTTACGCCCCTGAACTGGAAATTGAAGTAAAAAA -CTGACAAAGCGAGTCCGGGCAATTGAACAGAACGGACTCGAACAATATTTAATACTT ->contig00077 len=370 cov=274.2 corr=0 origname=Contig_27_274.194 sw=shovill-skesa/1.1.0 date=20241107 -CAGTGATAAACTGGAGGAAGGTGGGGATGACGTCAAGTCATCATGGCCCTTACGACCAGG -GCTACACACGTGCTACAATGGCGCATACAAAGAGAAGCGACCTCGCGAGAGCAAGCGGAC -CTCATAAAGTGCGTCGTAGTCCGGATTGGAGTCTGCAACTCGACTCCATGAAGTCGGAAT -CGCTAGTAATCGTGGATCAGAATGCCACGGTGAATACGTTCCCGGGCCTTGTACACACCG -CCCGTCACACCATGGGAGTGGGTTGCAAAAGAAGTAGGTAGCTTAACCTTCGGGAGGGCG -CTTACCACTTTGTGATTCATGACTGGGGTGAAGTCGTAACAAGGTAACCGTAGGGGAACC -TGCGGTTGGA ->contig00078 len=352 cov=130.9 corr=0 origname=Contig_73_130.895 sw=shovill-skesa/1.1.0 date=20241107 -TTCTCCTGAAAAAAAGCGGTCAGGCTTTGGATCTGCGTCTGGCTCATACTTTTTTCACCG -TTGCCCGTTTAAGCCCCTTCATGCGACGGATCACCACGGACGCCTCAGCCAGTAACCCGG -CCCGTGTCTCCTGGCTTTCCTGCCCCGGATGGGTATCACGCCGTCCGATAGTGGCGAACT -CACCCAACAGATCCGCTTTTGCCCTGGCAAAAACGGCTTTCATGTACTGGGCGCACAGGC -TGTTAAGTCCGCCCATCTTTACACCCGGCACATCTGCCGCCAGCGTATGGCCTTTCGCTT -TCCAGCTGGCCTCCACGTTTTCCAGCTCGGCATTCACCTCCGCGACAGCGGC ->contig00079 len=350 cov=131.8 corr=0 origname=Contig_52_131.758 sw=shovill-skesa/1.1.0 date=20241107 -GATACCCTACTGTCAGAACCGACTATCGTGCTGGACAACACGGACGACAGCGGAACAAAA -GGCGATAACCTGACCAACGTAAATAAGCCGACGTTTTTACTGGGCAATATTGACGCAGAC -GCGCGGTATGTCACGGTTGAGGTGCAGCATGGCGGCACGAAAGAAGTGCTGACGGCCACC -AAAGACGCGACCGGCAACTGGAGCGTGACACCGACCGGCACATGGGCAGATGGCGACTAT -ACGCTGACGGTGAGGGTGGAAGATGAGGCGGGGAACGAAAAACACTCAGCGTCGCTGACG -GTCACTGTTGATACCCAAATCACCATTGATGCTATTGAACTGGTTAATGA ->contig00080 len=340 cov=103.7 corr=0 origname=Contig_79_103.706 sw=shovill-skesa/1.1.0 date=20241107 -TTTTCGTAACGACAGCCAAAATACCCTGCTAACCAGTCGGGTATTTCATGCAGGTATTGA -GCACGCCATTTATGATCCTGCGGGTTTACAGCCCACAGGCGGCGCTCCGTGATTGTCACG -TCTGCCGGTGTACCTGGCGCGAAGGTTTCACGCCGCCAGGCATCAACGGCGTAGCAATCT -TCGTTTATTGCCAGCGTCATGCGCTGGCCTCAGGATTCGTCGGTAAAGGCCATTTAAGTA -TCAGTTCTGCCGCCATTTTCGGGCTTGCAGCTGCCGCACCAACACTACGCGGCGCATTAA -CCTTTAAGGCTTCAAACCCTGCATAAAGGTAATGCACCAT \ No newline at end of file
