Mercurial > repos > jpayne > refchooser
diff test-data/test/resistance/UCLA_1626_resfinder/resfinder.json @ 1:dcf6c2409ebb draft default tip
planemo upload commit 0afa3db59f582bebcb1aed2cc0f3dc2ade807d86-dirty
| author | jpayne |
|---|---|
| date | Mon, 08 Dec 2025 20:28:57 +0000 |
| parents | 91bc7378c1c5 |
| children |
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--- a/test-data/test/resistance/UCLA_1626_resfinder/resfinder.json Mon Aug 11 15:37:26 2025 +0000 +++ /dev/null Thu Jan 01 00:00:00 1970 +0000 @@ -1,1 +0,0 @@ -{"type": "software_result", "databases": {"ResFinder-2.4.0": {"type": "database", "database_name": "ResFinder", "database_version": "2.4.0", "key": "ResFinder-2.4.0", "database_commit": "unknown"}}, "seq_regions": {"blaOXA-193;;1;;CP013032": {"type": "seq_region", "phenotypes": ["unknown beta-lactam"], "ref_database": ["ResFinder-2.4.0"], "gene": true, "ref_id": "blaOXA-193_1_CP013032", "name": "blaOXA-193", "ref_acc": "CP013032", "identity": 99.87080103359173, "alignment_length": 774, "ref_seq_length": 774, "ref_start_pos": 1, "ref_end_pos": 774, "query_id": "Contig_17_116.474", "query_start_pos": 33449, "query_end_pos": 34222, "pmids": ["unpublished"], "notes": ["Class D;OXA-61-like;Natural in Campylobacter coli;Alternative name CJ0299;"], "coverage": 100.0, "grade": 2, "key": "blaOXA-193;;1;;CP013032"}, 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