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annotate tool-data/all_fasta.loc.sample @ 1:b747b2c8fdb6 draft default tip

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planemo upload commit 233f498f942f9253a7e6e1656157e59d38549c44-dirty
author jpayne
date Thu, 18 Sep 2025 22:57:05 +0000
parents 225680ef4cc1
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Ignore whitespace changes - Everywhere: Within whitespace: At end of lines:
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225680ef4cc1 planemo upload commit 233f498f942f9253a7e6e1656157e59d38549c44-dirty
jpayne
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1 #This file lists the locations and dbkeys of all the fasta files
225680ef4cc1 planemo upload commit 233f498f942f9253a7e6e1656157e59d38549c44-dirty
jpayne
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2 #under the "genome" directory (a directory that contains a directory
225680ef4cc1 planemo upload commit 233f498f942f9253a7e6e1656157e59d38549c44-dirty
jpayne
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3 #for each build). The script extract_fasta.py will generate the file
225680ef4cc1 planemo upload commit 233f498f942f9253a7e6e1656157e59d38549c44-dirty
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4 #all_fasta.loc. This file has the format (white space characters are
225680ef4cc1 planemo upload commit 233f498f942f9253a7e6e1656157e59d38549c44-dirty
jpayne
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5 #TAB characters):
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jpayne
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6 #
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jpayne
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7 #<unique_build_id> <dbkey> <display_name> <file_path>
225680ef4cc1 planemo upload commit 233f498f942f9253a7e6e1656157e59d38549c44-dirty
jpayne
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8 #
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jpayne
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9 #So, all_fasta.loc could look something like this:
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10 #test1 test1 Test-Genome ./test-data/test1.fa