jpayne@1
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1 <?xml version="1.0"?>
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2 <!DOCTYPE BlastOutput PUBLIC "-//NCBI//NCBI BlastOutput/EN" "http://www.ncbi.nlm.nih.gov/dtd/NCBI_BlastOutput.dtd">
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3 <BlastOutput>
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4 <BlastOutput_program>blastn</BlastOutput_program>
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5 <BlastOutput_version>BLASTN 2.7.1+</BlastOutput_version>
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6 <BlastOutput_reference>Zheng Zhang, Scott Schwartz, Lukas Wagner, and Webb Miller (2000), "A greedy algorithm for aligning DNA sequences", J Comput Biol 2000; 7(1-2):203-14.</BlastOutput_reference>
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7 <BlastOutput_db>forward.fastq.gz_H_and_O_and_specific_genes.fasta_mem.fasta_db</BlastOutput_db>
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8 <BlastOutput_query-ID>Query_1</BlastOutput_query-ID>
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9 <BlastOutput_query-def>O-1,3,19_not_in_3,10__130</BlastOutput_query-def>
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10 <BlastOutput_query-len>130</BlastOutput_query-len>
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11 <BlastOutput_param>
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12 <Parameters>
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13 <Parameters_expect>10</Parameters_expect>
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14 <Parameters_sc-match>1</Parameters_sc-match>
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15 <Parameters_sc-mismatch>-2</Parameters_sc-mismatch>
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16 <Parameters_gap-open>0</Parameters_gap-open>
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17 <Parameters_gap-extend>0</Parameters_gap-extend>
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18 <Parameters_filter>L;m;</Parameters_filter>
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19 </Parameters>
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20 </BlastOutput_param>
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21 <BlastOutput_iterations>
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22 <Iteration>
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23 <Iteration_iter-num>1</Iteration_iter-num>
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24 <Iteration_query-ID>Query_1</Iteration_query-ID>
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25 <Iteration_query-def>O-1,3,19_not_in_3,10__130</Iteration_query-def>
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26 <Iteration_query-len>130</Iteration_query-len>
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27 <Iteration_hits>
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28 </Iteration_hits>
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29 <Iteration_stat>
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30 <Statistics>
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31 <Statistics_db-num>113</Statistics_db-num>
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32 <Statistics_db-len>56730</Statistics_db-len>
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33 <Statistics_hsp-len>15</Statistics_hsp-len>
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34 <Statistics_eff-space>6329025</Statistics_eff-space>
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35 <Statistics_kappa>0.46</Statistics_kappa>
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36 <Statistics_lambda>1.28</Statistics_lambda>
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37 <Statistics_entropy>0.85</Statistics_entropy>
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38 </Statistics>
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39 </Iteration_stat>
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40 <Iteration_message>No hits found</Iteration_message>
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41 </Iteration>
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42 <Iteration>
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43 <Iteration_iter-num>2</Iteration_iter-num>
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44 <Iteration_query-ID>Query_2</Iteration_query-ID>
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45 <Iteration_query-def>O-11_wzy__1080</Iteration_query-def>
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46 <Iteration_query-len>1080</Iteration_query-len>
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47 <Iteration_hits>
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48 </Iteration_hits>
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49 <Iteration_stat>
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50 <Statistics>
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51 <Statistics_db-num>113</Statistics_db-num>
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52 <Statistics_db-len>56730</Statistics_db-len>
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53 <Statistics_hsp-len>18</Statistics_hsp-len>
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54 <Statistics_eff-space>58087152</Statistics_eff-space>
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55 <Statistics_kappa>0.46</Statistics_kappa>
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56 <Statistics_lambda>1.28</Statistics_lambda>
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57 <Statistics_entropy>0.85</Statistics_entropy>
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58 </Statistics>
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59 </Iteration_stat>
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60 <Iteration_message>No hits found</Iteration_message>
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61 </Iteration>
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62 <Iteration>
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63 <Iteration_iter-num>3</Iteration_iter-num>
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64 <Iteration_query-ID>Query_3</Iteration_query-ID>
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65 <Iteration_query-def>O-11_wzy-new-from-CP019192__1080</Iteration_query-def>
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66 <Iteration_query-len>1080</Iteration_query-len>
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67 <Iteration_hits>
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68 </Iteration_hits>
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69 <Iteration_stat>
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70 <Statistics>
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71 <Statistics_db-num>113</Statistics_db-num>
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72 <Statistics_db-len>56730</Statistics_db-len>
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73 <Statistics_hsp-len>18</Statistics_hsp-len>
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74 <Statistics_eff-space>58087152</Statistics_eff-space>
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75 <Statistics_kappa>0.46</Statistics_kappa>
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76 <Statistics_lambda>1.28</Statistics_lambda>
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77 <Statistics_entropy>0.85</Statistics_entropy>
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78 </Statistics>
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79 </Iteration_stat>
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80 <Iteration_message>No hits found</Iteration_message>
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81 </Iteration>
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82 <Iteration>
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83 <Iteration_iter-num>4</Iteration_iter-num>
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84 <Iteration_query-ID>Query_4</Iteration_query-ID>
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85 <Iteration_query-def>O-13_wzx__1236</Iteration_query-def>
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86 <Iteration_query-len>1236</Iteration_query-len>
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87 <Iteration_hits>
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88 <Hit>
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89 <Hit_num>1</Hit_num>
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90 <Hit_id>gnl|BL_ORD_ID|2</Hit_id>
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91 <Hit_def>NODE_3_length_1633_cov_12.729084</Hit_def>
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92 <Hit_accession>2</Hit_accession>
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93 <Hit_len>1633</Hit_len>
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94 <Hit_hsps>
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95 <Hsp>
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96 <Hsp_num>1</Hsp_num>
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97 <Hsp_bit-score>2265.11</Hsp_bit-score>
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98 <Hsp_score>1226</Hsp_score>
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99 <Hsp_evalue>0</Hsp_evalue>
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100 <Hsp_query-from>1</Hsp_query-from>
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101 <Hsp_query-to>1236</Hsp_query-to>
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102 <Hsp_hit-from>1462</Hsp_hit-from>
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103 <Hsp_hit-to>228</Hsp_hit-to>
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104 <Hsp_query-frame>1</Hsp_query-frame>
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105 <Hsp_hit-frame>-1</Hsp_hit-frame>
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106 <Hsp_identity>1233</Hsp_identity>
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107 <Hsp_positive>1233</Hsp_positive>
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108 <Hsp_gaps>1</Hsp_gaps>
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109 <Hsp_align-len>1236</Hsp_align-len>
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110 <Hsp_qseq>ATGGAAAAGCGTATTTATATAAATACCATTGCTAATTTATGTGGGGTTTTTTGGCAGGGAGCTATAATTCTTTTAATGGCTCCTTTTTACCTGAAGTTATTAGGGAAAGAACAATGGGGTATGGTGGCTGCATGTTTATCCTTACAAGGGATATTATTACTGCTTGATGCAGGAATGTCACAAGTTATGCCAAGGGACTTTGCACAAAAAAAACAGAATATTAAAGAGATATATTCAAACTATATAGCTTTATATTTTTTGATTGCGCTTTGTGCTGTGTTTTTCTTGTATTTTTCTGCAGAGGCTATTGCTGAAAAATGGTTTAGATTGGATGCTTTTTCTGCAAAGCAACTTGAACTCGCTATAAAAATTTTTGCAGGGCAGTTTTTTTTCCAGTTTTGCAATAACGTTAATTTGGCATATTGGAATGGGAATGAAGAGCAAGTAAAAGCAAACTTATCGCAATGTATATTCATTTCTTTGAAAAATATTACAGCAGTAATTTTAATTCTAAACGTTAGCCGACAAACATATATTTATGTATTATCTTTCTTCCTAATTGCTATGATTGAGTTTATCTGTAATTTTTCTTTTATCGTATCAAGGATAGGAGCGTGTAAACCGTCATGGGGAAAAATCAAAAGAATTATTATTACTAACTATAAAATATCCTTAGGGATTCTGTTAGGCGTTTTTTCTTCACAATTAGATAGAATATTTATGTCAAGGTTTTTAAGCATTCAAAACTTTGGCTTGTATGTTATGACTATGCAATTTGGACTTGCGTTATTGCAGTTACAGTATCCAATGGTTAAAGCAATATTACCTCATATCGCAAAAATTGGCGATACAACTAAGTTGGGATTATATAAAACAATAGCTTTTTTTTGTGTCTTAATGCCATCTTGCATATTATTTTTTTGGGCAAAAGACATACTTTGGTTATGGAGTCATAATATTGAAGTTGTAGAGTATGGAGTTATTATTGTCAAAATTTTGAGCGTTGCTGTGCTGATAAACTTTTTTTATAACTTTATTCACGTTAAGTTAATTGTTGAAAATAGAGGTGGGGTGATATTTATTTCGCAACTTTTGATTATTATTATTAACTCTATTTTCCTAATATTCTTTTCCCCAAGAATTCATGAGGTGGCTGGAGCATTATCATGGATGATTAATTTTAGCATAGTCTTATTATGTGGTTTGTTTTTTCTCCATAAAGGAAAAAAAAGATAA</Hsp_qseq>
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111 <Hsp_hseq>ATGGAAAAGCGTATTTATATAAATACCATTGCTAATTTATGTGGGGTTTTTTGGCAGGGAGCTATAATTCTTTTAATGGCTCCTTTTTACCTGAAGTTATTAGGGAAAGAACAATGGGGTATGGTGGCTGCATGTTTATCCTTACAAGGGATATTATTACTGCTTGATGCAGGAATGTCACAAGTTATGCCAAGGGACTTTGCACAAAAAAAACAGAATATTAAAGAGATATATTCAAACTATATAGCTTTATATTTTTTGATTGCGCTTTGTGCTGTGTTTTTCTTGTATTTTTCTGCAGAGGCTATTGCTGAAAAATGGTTTAGATTGGATGCTTTTTCTGCAAAGCAACTTGAACTCGCTATAAAAATTTTTGCAGGGCAGTTTTTTTTCCAGTTTTGCAATAACGTTAATTTGGCATATTGGAATGGGAATGAAGAGCAAGTAAAAGCAAACTTATCGCAATGTATATTCATTTCTTTGAAAAATATTACAGCAGTAATTTTAATTCTAAACGTTAGCCGACAAACATATATTTATGTATTATCTTTCTTCCTAATTGCTATGATTGAGTTTATCTGTAATTTTTCTTTTATCGTATCAAGGATAGGAGCGTGTAAACCGTCATGGGGAAAAATCAAAAGAATTATTATTACTAACTATAAAATATCCTTAGGGATTCTGTTAGGCGTTTTTTCTTCACAATTAGATAGAATATTTATGTCAAGGTTTTTAAGCATTCAAAACTTTGGCTTGTATGTTATGACTATGCAATTTGGTCTTGCGTTATTGCAGTTACAGTATCCAATGGTTAAAGCAATATTACCTCATATCGCAAAAATTGGCGATACAACTAAGTTGGGATTATATAAAACAATAGCTTTTTTTTGTGTCTTAATGCCATCTTGCATATTATTTTTTTGGGCAAAAGACATACTTTGGTTATGGAGTCATAATATTGAAGTTGTAGAGTATGGAGTTATTATTGTCAAAATTTTGAGCGTTGCTGTGCTGATAAACTTTTTTTATAACTTTATTCACGTTAAGTTAATTGTTGAAAATAGAGGTGGGGTGATATTTATTTCGCAACTTTTGATTATTATTATTAATTCTATTTTCCTAATATTCTTTTCCCCAAGAATTCATGAGGTGGCTGGAGCATTATCATGGATGATTAATTTTAGCATAGTCTTATTATGTGGTTTGTTTTTTCTCCATAAAGGAAAAAAA-GATAA</Hsp_hseq>
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112 <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||</Hsp_midline>
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113 </Hsp>
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114 </Hit_hsps>
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115 </Hit>
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116 </Iteration_hits>
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117 <Iteration_stat>
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118 <Statistics>
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119 <Statistics_db-num>113</Statistics_db-num>
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120 <Statistics_db-len>56730</Statistics_db-len>
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jpayne@1
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121 <Statistics_hsp-len>18</Statistics_hsp-len>
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122 <Statistics_eff-space>66619728</Statistics_eff-space>
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123 <Statistics_kappa>0.46</Statistics_kappa>
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124 <Statistics_lambda>1.28</Statistics_lambda>
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125 <Statistics_entropy>0.85</Statistics_entropy>
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126 </Statistics>
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127 </Iteration_stat>
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128 </Iteration>
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129 <Iteration>
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130 <Iteration_iter-num>5</Iteration_iter-num>
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131 <Iteration_query-ID>Query_5</Iteration_query-ID>
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132 <Iteration_query-def>O-16_wzy__1233</Iteration_query-def>
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133 <Iteration_query-len>1233</Iteration_query-len>
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134 <Iteration_hits>
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135 </Iteration_hits>
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136 <Iteration_stat>
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137 <Statistics>
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138 <Statistics_db-num>113</Statistics_db-num>
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139 <Statistics_db-len>56730</Statistics_db-len>
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jpayne@1
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140 <Statistics_hsp-len>18</Statistics_hsp-len>
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jpayne@1
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141 <Statistics_eff-space>66455640</Statistics_eff-space>
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jpayne@1
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142 <Statistics_kappa>0.46</Statistics_kappa>
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jpayne@1
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143 <Statistics_lambda>1.28</Statistics_lambda>
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jpayne@1
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144 <Statistics_entropy>0.85</Statistics_entropy>
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jpayne@1
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145 </Statistics>
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146 </Iteration_stat>
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147 <Iteration_message>No hits found</Iteration_message>
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148 </Iteration>
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149 <Iteration>
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jpayne@1
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150 <Iteration_iter-num>6</Iteration_iter-num>
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151 <Iteration_query-ID>Query_6</Iteration_query-ID>
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152 <Iteration_query-def>O-17_wzx__1221</Iteration_query-def>
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jpayne@1
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153 <Iteration_query-len>1221</Iteration_query-len>
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jpayne@1
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154 <Iteration_hits>
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155 </Iteration_hits>
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jpayne@1
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156 <Iteration_stat>
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157 <Statistics>
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158 <Statistics_db-num>113</Statistics_db-num>
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jpayne@1
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159 <Statistics_db-len>56730</Statistics_db-len>
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jpayne@1
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160 <Statistics_hsp-len>18</Statistics_hsp-len>
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jpayne@1
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161 <Statistics_eff-space>65799288</Statistics_eff-space>
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jpayne@1
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162 <Statistics_kappa>0.46</Statistics_kappa>
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jpayne@1
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163 <Statistics_lambda>1.28</Statistics_lambda>
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jpayne@1
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164 <Statistics_entropy>0.85</Statistics_entropy>
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jpayne@1
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165 </Statistics>
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166 </Iteration_stat>
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jpayne@1
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167 <Iteration_message>No hits found</Iteration_message>
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168 </Iteration>
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169 <Iteration>
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jpayne@1
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170 <Iteration_iter-num>7</Iteration_iter-num>
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jpayne@1
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171 <Iteration_query-ID>Query_7</Iteration_query-ID>
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172 <Iteration_query-def>O-18_wzy__1323</Iteration_query-def>
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jpayne@1
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173 <Iteration_query-len>1323</Iteration_query-len>
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jpayne@1
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174 <Iteration_hits>
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jpayne@1
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175 </Iteration_hits>
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jpayne@1
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176 <Iteration_stat>
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jpayne@1
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177 <Statistics>
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jpayne@1
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178 <Statistics_db-num>113</Statistics_db-num>
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jpayne@1
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179 <Statistics_db-len>56730</Statistics_db-len>
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jpayne@1
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180 <Statistics_hsp-len>18</Statistics_hsp-len>
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jpayne@1
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181 <Statistics_eff-space>71378280</Statistics_eff-space>
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jpayne@1
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182 <Statistics_kappa>0.46</Statistics_kappa>
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jpayne@1
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183 <Statistics_lambda>1.28</Statistics_lambda>
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jpayne@1
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184 <Statistics_entropy>0.85</Statistics_entropy>
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jpayne@1
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185 </Statistics>
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jpayne@1
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186 </Iteration_stat>
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jpayne@1
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187 <Iteration_message>No hits found</Iteration_message>
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jpayne@1
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188 </Iteration>
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189 <Iteration>
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jpayne@1
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190 <Iteration_iter-num>8</Iteration_iter-num>
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jpayne@1
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191 <Iteration_query-ID>Query_8</Iteration_query-ID>
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jpayne@1
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192 <Iteration_query-def>O-21_wzy__1089</Iteration_query-def>
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jpayne@1
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193 <Iteration_query-len>1089</Iteration_query-len>
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jpayne@1
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194 <Iteration_hits>
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jpayne@1
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195 </Iteration_hits>
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jpayne@1
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196 <Iteration_stat>
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jpayne@1
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197 <Statistics>
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jpayne@1
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198 <Statistics_db-num>113</Statistics_db-num>
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jpayne@1
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199 <Statistics_db-len>56730</Statistics_db-len>
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jpayne@1
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200 <Statistics_hsp-len>18</Statistics_hsp-len>
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jpayne@1
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201 <Statistics_eff-space>58579416</Statistics_eff-space>
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jpayne@1
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202 <Statistics_kappa>0.46</Statistics_kappa>
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jpayne@1
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203 <Statistics_lambda>1.28</Statistics_lambda>
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jpayne@1
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204 <Statistics_entropy>0.85</Statistics_entropy>
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jpayne@1
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205 </Statistics>
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jpayne@1
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206 </Iteration_stat>
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jpayne@1
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207 <Iteration_message>No hits found</Iteration_message>
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jpayne@1
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208 </Iteration>
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jpayne@1
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209 <Iteration>
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jpayne@1
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210 <Iteration_iter-num>9</Iteration_iter-num>
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jpayne@1
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211 <Iteration_query-ID>Query_9</Iteration_query-ID>
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jpayne@1
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212 <Iteration_query-def>O-28_wzy__1317</Iteration_query-def>
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jpayne@1
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213 <Iteration_query-len>1317</Iteration_query-len>
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jpayne@1
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214 <Iteration_hits>
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jpayne@1
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215 </Iteration_hits>
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jpayne@1
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216 <Iteration_stat>
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jpayne@1
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217 <Statistics>
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jpayne@1
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218 <Statistics_db-num>113</Statistics_db-num>
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jpayne@1
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219 <Statistics_db-len>56730</Statistics_db-len>
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jpayne@1
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220 <Statistics_hsp-len>18</Statistics_hsp-len>
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jpayne@1
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221 <Statistics_eff-space>71050104</Statistics_eff-space>
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jpayne@1
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222 <Statistics_kappa>0.46</Statistics_kappa>
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jpayne@1
|
223 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
224 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
225 </Statistics>
|
jpayne@1
|
226 </Iteration_stat>
|
jpayne@1
|
227 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
228 </Iteration>
|
jpayne@1
|
229 <Iteration>
|
jpayne@1
|
230 <Iteration_iter-num>10</Iteration_iter-num>
|
jpayne@1
|
231 <Iteration_query-ID>Query_10</Iteration_query-ID>
|
jpayne@1
|
232 <Iteration_query-def>O-28_wzy-another-lineage__1296</Iteration_query-def>
|
jpayne@1
|
233 <Iteration_query-len>1296</Iteration_query-len>
|
jpayne@1
|
234 <Iteration_hits>
|
jpayne@1
|
235 </Iteration_hits>
|
jpayne@1
|
236 <Iteration_stat>
|
jpayne@1
|
237 <Statistics>
|
jpayne@1
|
238 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
239 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
240 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
241 <Statistics_eff-space>69901488</Statistics_eff-space>
|
jpayne@1
|
242 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
243 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
244 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
245 </Statistics>
|
jpayne@1
|
246 </Iteration_stat>
|
jpayne@1
|
247 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
248 </Iteration>
|
jpayne@1
|
249 <Iteration>
|
jpayne@1
|
250 <Iteration_iter-num>11</Iteration_iter-num>
|
jpayne@1
|
251 <Iteration_query-ID>Query_11</Iteration_query-ID>
|
jpayne@1
|
252 <Iteration_query-def>O-3,10_not_in_1,3,19__1519</Iteration_query-def>
|
jpayne@1
|
253 <Iteration_query-len>1519</Iteration_query-len>
|
jpayne@1
|
254 <Iteration_hits>
|
jpayne@1
|
255 </Iteration_hits>
|
jpayne@1
|
256 <Iteration_stat>
|
jpayne@1
|
257 <Statistics>
|
jpayne@1
|
258 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
259 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
260 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
261 <Statistics_eff-space>82098696</Statistics_eff-space>
|
jpayne@1
|
262 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
263 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
264 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
265 </Statistics>
|
jpayne@1
|
266 </Iteration_stat>
|
jpayne@1
|
267 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
268 </Iteration>
|
jpayne@1
|
269 <Iteration>
|
jpayne@1
|
270 <Iteration_iter-num>12</Iteration_iter-num>
|
jpayne@1
|
271 <Iteration_query-ID>Query_12</Iteration_query-ID>
|
jpayne@1
|
272 <Iteration_query-def>O-3,10_wzx__1539</Iteration_query-def>
|
jpayne@1
|
273 <Iteration_query-len>1539</Iteration_query-len>
|
jpayne@1
|
274 <Iteration_hits>
|
jpayne@1
|
275 </Iteration_hits>
|
jpayne@1
|
276 <Iteration_stat>
|
jpayne@1
|
277 <Statistics>
|
jpayne@1
|
278 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
279 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
280 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
281 <Statistics_eff-space>83192616</Statistics_eff-space>
|
jpayne@1
|
282 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
283 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
284 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
285 </Statistics>
|
jpayne@1
|
286 </Iteration_stat>
|
jpayne@1
|
287 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
288 </Iteration>
|
jpayne@1
|
289 <Iteration>
|
jpayne@1
|
290 <Iteration_iter-num>13</Iteration_iter-num>
|
jpayne@1
|
291 <Iteration_query-ID>Query_13</Iteration_query-ID>
|
jpayne@1
|
292 <Iteration_query-def>O-30_wzx__1392</Iteration_query-def>
|
jpayne@1
|
293 <Iteration_query-len>1392</Iteration_query-len>
|
jpayne@1
|
294 <Iteration_hits>
|
jpayne@1
|
295 </Iteration_hits>
|
jpayne@1
|
296 <Iteration_stat>
|
jpayne@1
|
297 <Statistics>
|
jpayne@1
|
298 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
299 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
300 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
301 <Statistics_eff-space>75152304</Statistics_eff-space>
|
jpayne@1
|
302 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
303 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
304 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
305 </Statistics>
|
jpayne@1
|
306 </Iteration_stat>
|
jpayne@1
|
307 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
308 </Iteration>
|
jpayne@1
|
309 <Iteration>
|
jpayne@1
|
310 <Iteration_iter-num>14</Iteration_iter-num>
|
jpayne@1
|
311 <Iteration_query-ID>Query_14</Iteration_query-ID>
|
jpayne@1
|
312 <Iteration_query-def>O-35_wzy__1065</Iteration_query-def>
|
jpayne@1
|
313 <Iteration_query-len>1065</Iteration_query-len>
|
jpayne@1
|
314 <Iteration_hits>
|
jpayne@1
|
315 </Iteration_hits>
|
jpayne@1
|
316 <Iteration_stat>
|
jpayne@1
|
317 <Statistics>
|
jpayne@1
|
318 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
319 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
320 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
321 <Statistics_eff-space>57266712</Statistics_eff-space>
|
jpayne@1
|
322 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
323 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
324 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
325 </Statistics>
|
jpayne@1
|
326 </Iteration_stat>
|
jpayne@1
|
327 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
328 </Iteration>
|
jpayne@1
|
329 <Iteration>
|
jpayne@1
|
330 <Iteration_iter-num>15</Iteration_iter-num>
|
jpayne@1
|
331 <Iteration_query-ID>Query_15</Iteration_query-ID>
|
jpayne@1
|
332 <Iteration_query-def>O-38_wzy__1083</Iteration_query-def>
|
jpayne@1
|
333 <Iteration_query-len>1083</Iteration_query-len>
|
jpayne@1
|
334 <Iteration_hits>
|
jpayne@1
|
335 </Iteration_hits>
|
jpayne@1
|
336 <Iteration_stat>
|
jpayne@1
|
337 <Statistics>
|
jpayne@1
|
338 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
339 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
340 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
341 <Statistics_eff-space>58251240</Statistics_eff-space>
|
jpayne@1
|
342 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
343 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
344 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
345 </Statistics>
|
jpayne@1
|
346 </Iteration_stat>
|
jpayne@1
|
347 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
348 </Iteration>
|
jpayne@1
|
349 <Iteration>
|
jpayne@1
|
350 <Iteration_iter-num>16</Iteration_iter-num>
|
jpayne@1
|
351 <Iteration_query-ID>Query_16</Iteration_query-ID>
|
jpayne@1
|
352 <Iteration_query-def>O-39_wzy__1341</Iteration_query-def>
|
jpayne@1
|
353 <Iteration_query-len>1341</Iteration_query-len>
|
jpayne@1
|
354 <Iteration_hits>
|
jpayne@1
|
355 </Iteration_hits>
|
jpayne@1
|
356 <Iteration_stat>
|
jpayne@1
|
357 <Statistics>
|
jpayne@1
|
358 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
359 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
360 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
361 <Statistics_eff-space>72362808</Statistics_eff-space>
|
jpayne@1
|
362 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
363 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
364 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
365 </Statistics>
|
jpayne@1
|
366 </Iteration_stat>
|
jpayne@1
|
367 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
368 </Iteration>
|
jpayne@1
|
369 <Iteration>
|
jpayne@1
|
370 <Iteration_iter-num>17</Iteration_iter-num>
|
jpayne@1
|
371 <Iteration_query-ID>Query_17</Iteration_query-ID>
|
jpayne@1
|
372 <Iteration_query-def>O-40_wzy__1368</Iteration_query-def>
|
jpayne@1
|
373 <Iteration_query-len>1368</Iteration_query-len>
|
jpayne@1
|
374 <Iteration_hits>
|
jpayne@1
|
375 </Iteration_hits>
|
jpayne@1
|
376 <Iteration_stat>
|
jpayne@1
|
377 <Statistics>
|
jpayne@1
|
378 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
379 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
380 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
381 <Statistics_eff-space>73839600</Statistics_eff-space>
|
jpayne@1
|
382 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
383 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
384 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
385 </Statistics>
|
jpayne@1
|
386 </Iteration_stat>
|
jpayne@1
|
387 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
388 </Iteration>
|
jpayne@1
|
389 <Iteration>
|
jpayne@1
|
390 <Iteration_iter-num>18</Iteration_iter-num>
|
jpayne@1
|
391 <Iteration_query-ID>Query_18</Iteration_query-ID>
|
jpayne@1
|
392 <Iteration_query-def>O-40_wzy-from-blake-2014K-0489__1368</Iteration_query-def>
|
jpayne@1
|
393 <Iteration_query-len>1368</Iteration_query-len>
|
jpayne@1
|
394 <Iteration_hits>
|
jpayne@1
|
395 </Iteration_hits>
|
jpayne@1
|
396 <Iteration_stat>
|
jpayne@1
|
397 <Statistics>
|
jpayne@1
|
398 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
399 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
400 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
401 <Statistics_eff-space>73839600</Statistics_eff-space>
|
jpayne@1
|
402 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
403 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
404 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
405 </Statistics>
|
jpayne@1
|
406 </Iteration_stat>
|
jpayne@1
|
407 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
408 </Iteration>
|
jpayne@1
|
409 <Iteration>
|
jpayne@1
|
410 <Iteration_iter-num>19</Iteration_iter-num>
|
jpayne@1
|
411 <Iteration_query-ID>Query_19</Iteration_query-ID>
|
jpayne@1
|
412 <Iteration_query-def>O-41_wzy__1221</Iteration_query-def>
|
jpayne@1
|
413 <Iteration_query-len>1221</Iteration_query-len>
|
jpayne@1
|
414 <Iteration_hits>
|
jpayne@1
|
415 </Iteration_hits>
|
jpayne@1
|
416 <Iteration_stat>
|
jpayne@1
|
417 <Statistics>
|
jpayne@1
|
418 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
419 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
420 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
421 <Statistics_eff-space>65799288</Statistics_eff-space>
|
jpayne@1
|
422 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
423 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
424 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
425 </Statistics>
|
jpayne@1
|
426 </Iteration_stat>
|
jpayne@1
|
427 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
428 </Iteration>
|
jpayne@1
|
429 <Iteration>
|
jpayne@1
|
430 <Iteration_iter-num>20</Iteration_iter-num>
|
jpayne@1
|
431 <Iteration_query-ID>Query_20</Iteration_query-ID>
|
jpayne@1
|
432 <Iteration_query-def>O-42_wzy__1017</Iteration_query-def>
|
jpayne@1
|
433 <Iteration_query-len>1017</Iteration_query-len>
|
jpayne@1
|
434 <Iteration_hits>
|
jpayne@1
|
435 </Iteration_hits>
|
jpayne@1
|
436 <Iteration_stat>
|
jpayne@1
|
437 <Statistics>
|
jpayne@1
|
438 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
439 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
440 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
441 <Statistics_eff-space>54809000</Statistics_eff-space>
|
jpayne@1
|
442 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
443 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
444 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
445 </Statistics>
|
jpayne@1
|
446 </Iteration_stat>
|
jpayne@1
|
447 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
448 </Iteration>
|
jpayne@1
|
449 <Iteration>
|
jpayne@1
|
450 <Iteration_iter-num>21</Iteration_iter-num>
|
jpayne@1
|
451 <Iteration_query-ID>Query_21</Iteration_query-ID>
|
jpayne@1
|
452 <Iteration_query-def>O-43_wzy__1344</Iteration_query-def>
|
jpayne@1
|
453 <Iteration_query-len>1344</Iteration_query-len>
|
jpayne@1
|
454 <Iteration_hits>
|
jpayne@1
|
455 </Iteration_hits>
|
jpayne@1
|
456 <Iteration_stat>
|
jpayne@1
|
457 <Statistics>
|
jpayne@1
|
458 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
459 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
460 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
461 <Statistics_eff-space>72526896</Statistics_eff-space>
|
jpayne@1
|
462 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
463 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
464 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
465 </Statistics>
|
jpayne@1
|
466 </Iteration_stat>
|
jpayne@1
|
467 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
468 </Iteration>
|
jpayne@1
|
469 <Iteration>
|
jpayne@1
|
470 <Iteration_iter-num>22</Iteration_iter-num>
|
jpayne@1
|
471 <Iteration_query-ID>Query_22</Iteration_query-ID>
|
jpayne@1
|
472 <Iteration_query-def>O-44_wzy__1134</Iteration_query-def>
|
jpayne@1
|
473 <Iteration_query-len>1134</Iteration_query-len>
|
jpayne@1
|
474 <Iteration_hits>
|
jpayne@1
|
475 </Iteration_hits>
|
jpayne@1
|
476 <Iteration_stat>
|
jpayne@1
|
477 <Statistics>
|
jpayne@1
|
478 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
479 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
480 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
481 <Statistics_eff-space>61040736</Statistics_eff-space>
|
jpayne@1
|
482 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
483 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
484 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
485 </Statistics>
|
jpayne@1
|
486 </Iteration_stat>
|
jpayne@1
|
487 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
488 </Iteration>
|
jpayne@1
|
489 <Iteration>
|
jpayne@1
|
490 <Iteration_iter-num>23</Iteration_iter-num>
|
jpayne@1
|
491 <Iteration_query-ID>Query_23</Iteration_query-ID>
|
jpayne@1
|
492 <Iteration_query-def>O-44_wzy2__1247</Iteration_query-def>
|
jpayne@1
|
493 <Iteration_query-len>1247</Iteration_query-len>
|
jpayne@1
|
494 <Iteration_hits>
|
jpayne@1
|
495 </Iteration_hits>
|
jpayne@1
|
496 <Iteration_stat>
|
jpayne@1
|
497 <Statistics>
|
jpayne@1
|
498 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
499 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
500 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
501 <Statistics_eff-space>67221384</Statistics_eff-space>
|
jpayne@1
|
502 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
503 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
504 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
505 </Statistics>
|
jpayne@1
|
506 </Iteration_stat>
|
jpayne@1
|
507 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
508 </Iteration>
|
jpayne@1
|
509 <Iteration>
|
jpayne@1
|
510 <Iteration_iter-num>24</Iteration_iter-num>
|
jpayne@1
|
511 <Iteration_query-ID>Query_24</Iteration_query-ID>
|
jpayne@1
|
512 <Iteration_query-def>O-45_wzy__1164</Iteration_query-def>
|
jpayne@1
|
513 <Iteration_query-len>1164</Iteration_query-len>
|
jpayne@1
|
514 <Iteration_hits>
|
jpayne@1
|
515 </Iteration_hits>
|
jpayne@1
|
516 <Iteration_stat>
|
jpayne@1
|
517 <Statistics>
|
jpayne@1
|
518 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
519 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
520 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
521 <Statistics_eff-space>62681616</Statistics_eff-space>
|
jpayne@1
|
522 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
523 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
524 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
525 </Statistics>
|
jpayne@1
|
526 </Iteration_stat>
|
jpayne@1
|
527 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
528 </Iteration>
|
jpayne@1
|
529 <Iteration>
|
jpayne@1
|
530 <Iteration_iter-num>25</Iteration_iter-num>
|
jpayne@1
|
531 <Iteration_query-ID>Query_25</Iteration_query-ID>
|
jpayne@1
|
532 <Iteration_query-def>O-47_wzy__1095</Iteration_query-def>
|
jpayne@1
|
533 <Iteration_query-len>1095</Iteration_query-len>
|
jpayne@1
|
534 <Iteration_hits>
|
jpayne@1
|
535 </Iteration_hits>
|
jpayne@1
|
536 <Iteration_stat>
|
jpayne@1
|
537 <Statistics>
|
jpayne@1
|
538 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
539 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
540 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
541 <Statistics_eff-space>58907592</Statistics_eff-space>
|
jpayne@1
|
542 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
543 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
544 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
545 </Statistics>
|
jpayne@1
|
546 </Iteration_stat>
|
jpayne@1
|
547 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
548 </Iteration>
|
jpayne@1
|
549 <Iteration>
|
jpayne@1
|
550 <Iteration_iter-num>26</Iteration_iter-num>
|
jpayne@1
|
551 <Iteration_query-ID>Query_26</Iteration_query-ID>
|
jpayne@1
|
552 <Iteration_query-def>O-48_wzy__1194</Iteration_query-def>
|
jpayne@1
|
553 <Iteration_query-len>1194</Iteration_query-len>
|
jpayne@1
|
554 <Iteration_hits>
|
jpayne@1
|
555 </Iteration_hits>
|
jpayne@1
|
556 <Iteration_stat>
|
jpayne@1
|
557 <Statistics>
|
jpayne@1
|
558 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
559 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
560 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
561 <Statistics_eff-space>64322496</Statistics_eff-space>
|
jpayne@1
|
562 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
563 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
564 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
565 </Statistics>
|
jpayne@1
|
566 </Iteration_stat>
|
jpayne@1
|
567 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
568 </Iteration>
|
jpayne@1
|
569 <Iteration>
|
jpayne@1
|
570 <Iteration_iter-num>27</Iteration_iter-num>
|
jpayne@1
|
571 <Iteration_query-ID>Query_27</Iteration_query-ID>
|
jpayne@1
|
572 <Iteration_query-def>O-48_wzy-from-blake-2014K-0232__1194</Iteration_query-def>
|
jpayne@1
|
573 <Iteration_query-len>1194</Iteration_query-len>
|
jpayne@1
|
574 <Iteration_hits>
|
jpayne@1
|
575 </Iteration_hits>
|
jpayne@1
|
576 <Iteration_stat>
|
jpayne@1
|
577 <Statistics>
|
jpayne@1
|
578 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
579 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
580 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
581 <Statistics_eff-space>64322496</Statistics_eff-space>
|
jpayne@1
|
582 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
583 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
584 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
585 </Statistics>
|
jpayne@1
|
586 </Iteration_stat>
|
jpayne@1
|
587 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
588 </Iteration>
|
jpayne@1
|
589 <Iteration>
|
jpayne@1
|
590 <Iteration_iter-num>28</Iteration_iter-num>
|
jpayne@1
|
591 <Iteration_query-ID>Query_28</Iteration_query-ID>
|
jpayne@1
|
592 <Iteration_query-def>O-48_wzy-from-2013K-0909__1194</Iteration_query-def>
|
jpayne@1
|
593 <Iteration_query-len>1194</Iteration_query-len>
|
jpayne@1
|
594 <Iteration_hits>
|
jpayne@1
|
595 </Iteration_hits>
|
jpayne@1
|
596 <Iteration_stat>
|
jpayne@1
|
597 <Statistics>
|
jpayne@1
|
598 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
599 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
600 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
601 <Statistics_eff-space>64322496</Statistics_eff-space>
|
jpayne@1
|
602 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
603 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
604 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
605 </Statistics>
|
jpayne@1
|
606 </Iteration_stat>
|
jpayne@1
|
607 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
608 </Iteration>
|
jpayne@1
|
609 <Iteration>
|
jpayne@1
|
610 <Iteration_iter-num>29</Iteration_iter-num>
|
jpayne@1
|
611 <Iteration_query-ID>Query_29</Iteration_query-ID>
|
jpayne@1
|
612 <Iteration_query-def>O-48_unknown-from-serveral-cdc-new-genomes__4477</Iteration_query-def>
|
jpayne@1
|
613 <Iteration_query-len>4477</Iteration_query-len>
|
jpayne@1
|
614 <Iteration_hits>
|
jpayne@1
|
615 </Iteration_hits>
|
jpayne@1
|
616 <Iteration_stat>
|
jpayne@1
|
617 <Statistics>
|
jpayne@1
|
618 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
619 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
620 <Statistics_hsp-len>19</Statistics_hsp-len>
|
jpayne@1
|
621 <Statistics_eff-space>243331014</Statistics_eff-space>
|
jpayne@1
|
622 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
623 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
624 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
625 </Statistics>
|
jpayne@1
|
626 </Iteration_stat>
|
jpayne@1
|
627 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
628 </Iteration>
|
jpayne@1
|
629 <Iteration>
|
jpayne@1
|
630 <Iteration_iter-num>30</Iteration_iter-num>
|
jpayne@1
|
631 <Iteration_query-ID>Query_30</Iteration_query-ID>
|
jpayne@1
|
632 <Iteration_query-def>O-4_wzx__1293</Iteration_query-def>
|
jpayne@1
|
633 <Iteration_query-len>1293</Iteration_query-len>
|
jpayne@1
|
634 <Iteration_hits>
|
jpayne@1
|
635 </Iteration_hits>
|
jpayne@1
|
636 <Iteration_stat>
|
jpayne@1
|
637 <Statistics>
|
jpayne@1
|
638 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
639 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
640 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
641 <Statistics_eff-space>69737400</Statistics_eff-space>
|
jpayne@1
|
642 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
643 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
644 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
645 </Statistics>
|
jpayne@1
|
646 </Iteration_stat>
|
jpayne@1
|
647 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
648 </Iteration>
|
jpayne@1
|
649 <Iteration>
|
jpayne@1
|
650 <Iteration_iter-num>31</Iteration_iter-num>
|
jpayne@1
|
651 <Iteration_query-ID>Query_31</Iteration_query-ID>
|
jpayne@1
|
652 <Iteration_query-def>O-50_wzy__978</Iteration_query-def>
|
jpayne@1
|
653 <Iteration_query-len>978</Iteration_query-len>
|
jpayne@1
|
654 <Iteration_hits>
|
jpayne@1
|
655 </Iteration_hits>
|
jpayne@1
|
656 <Iteration_stat>
|
jpayne@1
|
657 <Statistics>
|
jpayne@1
|
658 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
659 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
660 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
661 <Statistics_eff-space>52671449</Statistics_eff-space>
|
jpayne@1
|
662 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
663 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
664 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
665 </Statistics>
|
jpayne@1
|
666 </Iteration_stat>
|
jpayne@1
|
667 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
668 </Iteration>
|
jpayne@1
|
669 <Iteration>
|
jpayne@1
|
670 <Iteration_iter-num>32</Iteration_iter-num>
|
jpayne@1
|
671 <Iteration_query-ID>Query_32</Iteration_query-ID>
|
jpayne@1
|
672 <Iteration_query-def>O-51_wzy__1026</Iteration_query-def>
|
jpayne@1
|
673 <Iteration_query-len>1026</Iteration_query-len>
|
jpayne@1
|
674 <Iteration_hits>
|
jpayne@1
|
675 </Iteration_hits>
|
jpayne@1
|
676 <Iteration_stat>
|
jpayne@1
|
677 <Statistics>
|
jpayne@1
|
678 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
679 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
680 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
681 <Statistics_eff-space>55302281</Statistics_eff-space>
|
jpayne@1
|
682 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
683 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
684 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
685 </Statistics>
|
jpayne@1
|
686 </Iteration_stat>
|
jpayne@1
|
687 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
688 </Iteration>
|
jpayne@1
|
689 <Iteration>
|
jpayne@1
|
690 <Iteration_iter-num>33</Iteration_iter-num>
|
jpayne@1
|
691 <Iteration_query-ID>Query_33</Iteration_query-ID>
|
jpayne@1
|
692 <Iteration_query-def>O-52_wzy__1065</Iteration_query-def>
|
jpayne@1
|
693 <Iteration_query-len>1065</Iteration_query-len>
|
jpayne@1
|
694 <Iteration_hits>
|
jpayne@1
|
695 </Iteration_hits>
|
jpayne@1
|
696 <Iteration_stat>
|
jpayne@1
|
697 <Statistics>
|
jpayne@1
|
698 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
699 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
700 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
701 <Statistics_eff-space>57266712</Statistics_eff-space>
|
jpayne@1
|
702 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
703 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
704 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
705 </Statistics>
|
jpayne@1
|
706 </Iteration_stat>
|
jpayne@1
|
707 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
708 </Iteration>
|
jpayne@1
|
709 <Iteration>
|
jpayne@1
|
710 <Iteration_iter-num>34</Iteration_iter-num>
|
jpayne@1
|
711 <Iteration_query-ID>Query_34</Iteration_query-ID>
|
jpayne@1
|
712 <Iteration_query-def>O-53_wzy__1119</Iteration_query-def>
|
jpayne@1
|
713 <Iteration_query-len>1119</Iteration_query-len>
|
jpayne@1
|
714 <Iteration_hits>
|
jpayne@1
|
715 </Iteration_hits>
|
jpayne@1
|
716 <Iteration_stat>
|
jpayne@1
|
717 <Statistics>
|
jpayne@1
|
718 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
719 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
720 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
721 <Statistics_eff-space>60220296</Statistics_eff-space>
|
jpayne@1
|
722 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
723 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
724 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
725 </Statistics>
|
jpayne@1
|
726 </Iteration_stat>
|
jpayne@1
|
727 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
728 </Iteration>
|
jpayne@1
|
729 <Iteration>
|
jpayne@1
|
730 <Iteration_iter-num>35</Iteration_iter-num>
|
jpayne@1
|
731 <Iteration_query-ID>Query_35</Iteration_query-ID>
|
jpayne@1
|
732 <Iteration_query-def>O-54_wbbF__1380</Iteration_query-def>
|
jpayne@1
|
733 <Iteration_query-len>1380</Iteration_query-len>
|
jpayne@1
|
734 <Iteration_hits>
|
jpayne@1
|
735 </Iteration_hits>
|
jpayne@1
|
736 <Iteration_stat>
|
jpayne@1
|
737 <Statistics>
|
jpayne@1
|
738 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
739 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
740 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
741 <Statistics_eff-space>74495952</Statistics_eff-space>
|
jpayne@1
|
742 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
743 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
744 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
745 </Statistics>
|
jpayne@1
|
746 </Iteration_stat>
|
jpayne@1
|
747 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
748 </Iteration>
|
jpayne@1
|
749 <Iteration>
|
jpayne@1
|
750 <Iteration_iter-num>36</Iteration_iter-num>
|
jpayne@1
|
751 <Iteration_query-ID>Query_36</Iteration_query-ID>
|
jpayne@1
|
752 <Iteration_query-def>O-55_wzy__1128</Iteration_query-def>
|
jpayne@1
|
753 <Iteration_query-len>1128</Iteration_query-len>
|
jpayne@1
|
754 <Iteration_hits>
|
jpayne@1
|
755 </Iteration_hits>
|
jpayne@1
|
756 <Iteration_stat>
|
jpayne@1
|
757 <Statistics>
|
jpayne@1
|
758 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
759 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
760 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
761 <Statistics_eff-space>60712560</Statistics_eff-space>
|
jpayne@1
|
762 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
763 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
764 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
765 </Statistics>
|
jpayne@1
|
766 </Iteration_stat>
|
jpayne@1
|
767 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
768 </Iteration>
|
jpayne@1
|
769 <Iteration>
|
jpayne@1
|
770 <Iteration_iter-num>37</Iteration_iter-num>
|
jpayne@1
|
771 <Iteration_query-ID>Query_37</Iteration_query-ID>
|
jpayne@1
|
772 <Iteration_query-def>O-56_wzy__1179</Iteration_query-def>
|
jpayne@1
|
773 <Iteration_query-len>1179</Iteration_query-len>
|
jpayne@1
|
774 <Iteration_hits>
|
jpayne@1
|
775 </Iteration_hits>
|
jpayne@1
|
776 <Iteration_stat>
|
jpayne@1
|
777 <Statistics>
|
jpayne@1
|
778 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
779 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
780 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
781 <Statistics_eff-space>63502056</Statistics_eff-space>
|
jpayne@1
|
782 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
783 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
784 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
785 </Statistics>
|
jpayne@1
|
786 </Iteration_stat>
|
jpayne@1
|
787 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
788 </Iteration>
|
jpayne@1
|
789 <Iteration>
|
jpayne@1
|
790 <Iteration_iter-num>38</Iteration_iter-num>
|
jpayne@1
|
791 <Iteration_query-ID>Query_38</Iteration_query-ID>
|
jpayne@1
|
792 <Iteration_query-def>O-57_wzy__1038</Iteration_query-def>
|
jpayne@1
|
793 <Iteration_query-len>1038</Iteration_query-len>
|
jpayne@1
|
794 <Iteration_hits>
|
jpayne@1
|
795 </Iteration_hits>
|
jpayne@1
|
796 <Iteration_stat>
|
jpayne@1
|
797 <Statistics>
|
jpayne@1
|
798 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
799 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
800 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
801 <Statistics_eff-space>55959989</Statistics_eff-space>
|
jpayne@1
|
802 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
803 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
804 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
805 </Statistics>
|
jpayne@1
|
806 </Iteration_stat>
|
jpayne@1
|
807 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
808 </Iteration>
|
jpayne@1
|
809 <Iteration>
|
jpayne@1
|
810 <Iteration_iter-num>39</Iteration_iter-num>
|
jpayne@1
|
811 <Iteration_query-ID>Query_39</Iteration_query-ID>
|
jpayne@1
|
812 <Iteration_query-def>O-58_wzy__1263</Iteration_query-def>
|
jpayne@1
|
813 <Iteration_query-len>1263</Iteration_query-len>
|
jpayne@1
|
814 <Iteration_hits>
|
jpayne@1
|
815 </Iteration_hits>
|
jpayne@1
|
816 <Iteration_stat>
|
jpayne@1
|
817 <Statistics>
|
jpayne@1
|
818 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
819 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
820 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
821 <Statistics_eff-space>68096520</Statistics_eff-space>
|
jpayne@1
|
822 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
823 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
824 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
825 </Statistics>
|
jpayne@1
|
826 </Iteration_stat>
|
jpayne@1
|
827 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
828 </Iteration>
|
jpayne@1
|
829 <Iteration>
|
jpayne@1
|
830 <Iteration_iter-num>40</Iteration_iter-num>
|
jpayne@1
|
831 <Iteration_query-ID>Query_40</Iteration_query-ID>
|
jpayne@1
|
832 <Iteration_query-def>O-59_wzy__1236</Iteration_query-def>
|
jpayne@1
|
833 <Iteration_query-len>1236</Iteration_query-len>
|
jpayne@1
|
834 <Iteration_hits>
|
jpayne@1
|
835 </Iteration_hits>
|
jpayne@1
|
836 <Iteration_stat>
|
jpayne@1
|
837 <Statistics>
|
jpayne@1
|
838 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
839 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
840 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
841 <Statistics_eff-space>66619728</Statistics_eff-space>
|
jpayne@1
|
842 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
843 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
844 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
845 </Statistics>
|
jpayne@1
|
846 </Iteration_stat>
|
jpayne@1
|
847 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
848 </Iteration>
|
jpayne@1
|
849 <Iteration>
|
jpayne@1
|
850 <Iteration_iter-num>41</Iteration_iter-num>
|
jpayne@1
|
851 <Iteration_query-ID>Query_41</Iteration_query-ID>
|
jpayne@1
|
852 <Iteration_query-def>O-6,14_wzy__1344</Iteration_query-def>
|
jpayne@1
|
853 <Iteration_query-len>1344</Iteration_query-len>
|
jpayne@1
|
854 <Iteration_hits>
|
jpayne@1
|
855 </Iteration_hits>
|
jpayne@1
|
856 <Iteration_stat>
|
jpayne@1
|
857 <Statistics>
|
jpayne@1
|
858 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
859 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
860 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
861 <Statistics_eff-space>72526896</Statistics_eff-space>
|
jpayne@1
|
862 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
863 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
864 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
865 </Statistics>
|
jpayne@1
|
866 </Iteration_stat>
|
jpayne@1
|
867 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
868 </Iteration>
|
jpayne@1
|
869 <Iteration>
|
jpayne@1
|
870 <Iteration_iter-num>42</Iteration_iter-num>
|
jpayne@1
|
871 <Iteration_query-ID>Query_42</Iteration_query-ID>
|
jpayne@1
|
872 <Iteration_query-def>O-6,14_wzy-from-Stk2184__1344</Iteration_query-def>
|
jpayne@1
|
873 <Iteration_query-len>1344</Iteration_query-len>
|
jpayne@1
|
874 <Iteration_hits>
|
jpayne@1
|
875 </Iteration_hits>
|
jpayne@1
|
876 <Iteration_stat>
|
jpayne@1
|
877 <Statistics>
|
jpayne@1
|
878 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
879 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
880 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
881 <Statistics_eff-space>72526896</Statistics_eff-space>
|
jpayne@1
|
882 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
883 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
884 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
885 </Statistics>
|
jpayne@1
|
886 </Iteration_stat>
|
jpayne@1
|
887 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
888 </Iteration>
|
jpayne@1
|
889 <Iteration>
|
jpayne@1
|
890 <Iteration_iter-num>43</Iteration_iter-num>
|
jpayne@1
|
891 <Iteration_query-ID>Query_43</Iteration_query-ID>
|
jpayne@1
|
892 <Iteration_query-def>O-60_wzy__1050</Iteration_query-def>
|
jpayne@1
|
893 <Iteration_query-len>1050</Iteration_query-len>
|
jpayne@1
|
894 <Iteration_hits>
|
jpayne@1
|
895 </Iteration_hits>
|
jpayne@1
|
896 <Iteration_stat>
|
jpayne@1
|
897 <Statistics>
|
jpayne@1
|
898 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
899 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
900 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
901 <Statistics_eff-space>56446272</Statistics_eff-space>
|
jpayne@1
|
902 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
903 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
904 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
905 </Statistics>
|
jpayne@1
|
906 </Iteration_stat>
|
jpayne@1
|
907 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
908 </Iteration>
|
jpayne@1
|
909 <Iteration>
|
jpayne@1
|
910 <Iteration_iter-num>44</Iteration_iter-num>
|
jpayne@1
|
911 <Iteration_query-ID>Query_44</Iteration_query-ID>
|
jpayne@1
|
912 <Iteration_query-def>O-61_wzy__1326</Iteration_query-def>
|
jpayne@1
|
913 <Iteration_query-len>1326</Iteration_query-len>
|
jpayne@1
|
914 <Iteration_hits>
|
jpayne@1
|
915 </Iteration_hits>
|
jpayne@1
|
916 <Iteration_stat>
|
jpayne@1
|
917 <Statistics>
|
jpayne@1
|
918 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
919 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
920 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
921 <Statistics_eff-space>71542368</Statistics_eff-space>
|
jpayne@1
|
922 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
923 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
924 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
925 </Statistics>
|
jpayne@1
|
926 </Iteration_stat>
|
jpayne@1
|
927 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
928 </Iteration>
|
jpayne@1
|
929 <Iteration>
|
jpayne@1
|
930 <Iteration_iter-num>45</Iteration_iter-num>
|
jpayne@1
|
931 <Iteration_query-ID>Query_45</Iteration_query-ID>
|
jpayne@1
|
932 <Iteration_query-def>O-62_wzy__1023</Iteration_query-def>
|
jpayne@1
|
933 <Iteration_query-len>1023</Iteration_query-len>
|
jpayne@1
|
934 <Iteration_hits>
|
jpayne@1
|
935 </Iteration_hits>
|
jpayne@1
|
936 <Iteration_stat>
|
jpayne@1
|
937 <Statistics>
|
jpayne@1
|
938 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
939 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
940 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
941 <Statistics_eff-space>55137854</Statistics_eff-space>
|
jpayne@1
|
942 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
943 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
944 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
945 </Statistics>
|
jpayne@1
|
946 </Iteration_stat>
|
jpayne@1
|
947 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
948 </Iteration>
|
jpayne@1
|
949 <Iteration>
|
jpayne@1
|
950 <Iteration_iter-num>46</Iteration_iter-num>
|
jpayne@1
|
951 <Iteration_query-ID>Query_46</Iteration_query-ID>
|
jpayne@1
|
952 <Iteration_query-def>O-63_wzy__945</Iteration_query-def>
|
jpayne@1
|
953 <Iteration_query-len>945</Iteration_query-len>
|
jpayne@1
|
954 <Iteration_hits>
|
jpayne@1
|
955 </Iteration_hits>
|
jpayne@1
|
956 <Iteration_stat>
|
jpayne@1
|
957 <Statistics>
|
jpayne@1
|
958 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
959 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
960 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
961 <Statistics_eff-space>50862752</Statistics_eff-space>
|
jpayne@1
|
962 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
963 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
964 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
965 </Statistics>
|
jpayne@1
|
966 </Iteration_stat>
|
jpayne@1
|
967 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
968 </Iteration>
|
jpayne@1
|
969 <Iteration>
|
jpayne@1
|
970 <Iteration_iter-num>47</Iteration_iter-num>
|
jpayne@1
|
971 <Iteration_query-ID>Query_47</Iteration_query-ID>
|
jpayne@1
|
972 <Iteration_query-def>O-65_wzy__1125</Iteration_query-def>
|
jpayne@1
|
973 <Iteration_query-len>1125</Iteration_query-len>
|
jpayne@1
|
974 <Iteration_hits>
|
jpayne@1
|
975 </Iteration_hits>
|
jpayne@1
|
976 <Iteration_stat>
|
jpayne@1
|
977 <Statistics>
|
jpayne@1
|
978 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
979 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
980 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
981 <Statistics_eff-space>60548472</Statistics_eff-space>
|
jpayne@1
|
982 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
983 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
984 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
985 </Statistics>
|
jpayne@1
|
986 </Iteration_stat>
|
jpayne@1
|
987 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
988 </Iteration>
|
jpayne@1
|
989 <Iteration>
|
jpayne@1
|
990 <Iteration_iter-num>48</Iteration_iter-num>
|
jpayne@1
|
991 <Iteration_query-ID>Query_48</Iteration_query-ID>
|
jpayne@1
|
992 <Iteration_query-def>O-66_wzx__1257</Iteration_query-def>
|
jpayne@1
|
993 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
994 <Iteration_hits>
|
jpayne@1
|
995 </Iteration_hits>
|
jpayne@1
|
996 <Iteration_stat>
|
jpayne@1
|
997 <Statistics>
|
jpayne@1
|
998 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
999 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1000 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1001 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
1002 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1003 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1004 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1005 </Statistics>
|
jpayne@1
|
1006 </Iteration_stat>
|
jpayne@1
|
1007 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
1008 </Iteration>
|
jpayne@1
|
1009 <Iteration>
|
jpayne@1
|
1010 <Iteration_iter-num>49</Iteration_iter-num>
|
jpayne@1
|
1011 <Iteration_query-ID>Query_49</Iteration_query-ID>
|
jpayne@1
|
1012 <Iteration_query-def>O-67_wzt__741</Iteration_query-def>
|
jpayne@1
|
1013 <Iteration_query-len>741</Iteration_query-len>
|
jpayne@1
|
1014 <Iteration_hits>
|
jpayne@1
|
1015 </Iteration_hits>
|
jpayne@1
|
1016 <Iteration_stat>
|
jpayne@1
|
1017 <Statistics>
|
jpayne@1
|
1018 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1019 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1020 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
1021 <Statistics_eff-space>39681716</Statistics_eff-space>
|
jpayne@1
|
1022 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1023 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1024 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1025 </Statistics>
|
jpayne@1
|
1026 </Iteration_stat>
|
jpayne@1
|
1027 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
1028 </Iteration>
|
jpayne@1
|
1029 <Iteration>
|
jpayne@1
|
1030 <Iteration_iter-num>50</Iteration_iter-num>
|
jpayne@1
|
1031 <Iteration_query-ID>Query_50</Iteration_query-ID>
|
jpayne@1
|
1032 <Iteration_query-def>O-7_wzy__1080</Iteration_query-def>
|
jpayne@1
|
1033 <Iteration_query-len>1080</Iteration_query-len>
|
jpayne@1
|
1034 <Iteration_hits>
|
jpayne@1
|
1035 </Iteration_hits>
|
jpayne@1
|
1036 <Iteration_stat>
|
jpayne@1
|
1037 <Statistics>
|
jpayne@1
|
1038 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1039 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1040 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1041 <Statistics_eff-space>58087152</Statistics_eff-space>
|
jpayne@1
|
1042 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1043 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1044 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1045 </Statistics>
|
jpayne@1
|
1046 </Iteration_stat>
|
jpayne@1
|
1047 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
1048 </Iteration>
|
jpayne@1
|
1049 <Iteration>
|
jpayne@1
|
1050 <Iteration_iter-num>51</Iteration_iter-num>
|
jpayne@1
|
1051 <Iteration_query-ID>Query_51</Iteration_query-ID>
|
jpayne@1
|
1052 <Iteration_query-def>O-8_wzy__1200</Iteration_query-def>
|
jpayne@1
|
1053 <Iteration_query-len>1200</Iteration_query-len>
|
jpayne@1
|
1054 <Iteration_hits>
|
jpayne@1
|
1055 </Iteration_hits>
|
jpayne@1
|
1056 <Iteration_stat>
|
jpayne@1
|
1057 <Statistics>
|
jpayne@1
|
1058 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1059 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1060 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1061 <Statistics_eff-space>64650672</Statistics_eff-space>
|
jpayne@1
|
1062 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1063 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1064 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1065 </Statistics>
|
jpayne@1
|
1066 </Iteration_stat>
|
jpayne@1
|
1067 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
1068 </Iteration>
|
jpayne@1
|
1069 <Iteration>
|
jpayne@1
|
1070 <Iteration_iter-num>52</Iteration_iter-num>
|
jpayne@1
|
1071 <Iteration_query-ID>Query_52</Iteration_query-ID>
|
jpayne@1
|
1072 <Iteration_query-def>O-9,46,27_partial_wzy__1019</Iteration_query-def>
|
jpayne@1
|
1073 <Iteration_query-len>1019</Iteration_query-len>
|
jpayne@1
|
1074 <Iteration_hits>
|
jpayne@1
|
1075 </Iteration_hits>
|
jpayne@1
|
1076 <Iteration_stat>
|
jpayne@1
|
1077 <Statistics>
|
jpayne@1
|
1078 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1079 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1080 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
1081 <Statistics_eff-space>54918618</Statistics_eff-space>
|
jpayne@1
|
1082 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1083 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1084 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1085 </Statistics>
|
jpayne@1
|
1086 </Iteration_stat>
|
jpayne@1
|
1087 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
1088 </Iteration>
|
jpayne@1
|
1089 <Iteration>
|
jpayne@1
|
1090 <Iteration_iter-num>53</Iteration_iter-num>
|
jpayne@1
|
1091 <Iteration_query-ID>Query_53</Iteration_query-ID>
|
jpayne@1
|
1092 <Iteration_query-def>O-9,46_wbaV__1002</Iteration_query-def>
|
jpayne@1
|
1093 <Iteration_query-len>1002</Iteration_query-len>
|
jpayne@1
|
1094 <Iteration_hits>
|
jpayne@1
|
1095 </Iteration_hits>
|
jpayne@1
|
1096 <Iteration_stat>
|
jpayne@1
|
1097 <Statistics>
|
jpayne@1
|
1098 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1099 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1100 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
1101 <Statistics_eff-space>53986865</Statistics_eff-space>
|
jpayne@1
|
1102 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1103 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1104 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1105 </Statistics>
|
jpayne@1
|
1106 </Iteration_stat>
|
jpayne@1
|
1107 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
1108 </Iteration>
|
jpayne@1
|
1109 <Iteration>
|
jpayne@1
|
1110 <Iteration_iter-num>54</Iteration_iter-num>
|
jpayne@1
|
1111 <Iteration_query-ID>Query_54</Iteration_query-ID>
|
jpayne@1
|
1112 <Iteration_query-def>O-9,46_wzy__1191</Iteration_query-def>
|
jpayne@1
|
1113 <Iteration_query-len>1191</Iteration_query-len>
|
jpayne@1
|
1114 <Iteration_hits>
|
jpayne@1
|
1115 </Iteration_hits>
|
jpayne@1
|
1116 <Iteration_stat>
|
jpayne@1
|
1117 <Statistics>
|
jpayne@1
|
1118 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1119 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1120 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1121 <Statistics_eff-space>64158408</Statistics_eff-space>
|
jpayne@1
|
1122 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1123 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1124 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1125 </Statistics>
|
jpayne@1
|
1126 </Iteration_stat>
|
jpayne@1
|
1127 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
1128 </Iteration>
|
jpayne@1
|
1129 <Iteration>
|
jpayne@1
|
1130 <Iteration_iter-num>55</Iteration_iter-num>
|
jpayne@1
|
1131 <Iteration_query-ID>Query_55</Iteration_query-ID>
|
jpayne@1
|
1132 <Iteration_query-def>sdf-I_AF370707__333</Iteration_query-def>
|
jpayne@1
|
1133 <Iteration_query-len>333</Iteration_query-len>
|
jpayne@1
|
1134 <Iteration_hits>
|
jpayne@1
|
1135 </Iteration_hits>
|
jpayne@1
|
1136 <Iteration_stat>
|
jpayne@1
|
1137 <Statistics>
|
jpayne@1
|
1138 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1139 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1140 <Statistics_hsp-len>16</Statistics_hsp-len>
|
jpayne@1
|
1141 <Statistics_eff-space>17410274</Statistics_eff-space>
|
jpayne@1
|
1142 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1143 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1144 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1145 </Statistics>
|
jpayne@1
|
1146 </Iteration_stat>
|
jpayne@1
|
1147 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
1148 </Iteration>
|
jpayne@1
|
1149 <Iteration>
|
jpayne@1
|
1150 <Iteration_iter-num>56</Iteration_iter-num>
|
jpayne@1
|
1151 <Iteration_query-ID>Query_56</Iteration_query-ID>
|
jpayne@1
|
1152 <Iteration_query-def>fliC_z65_Salmonella.bongori_V.66:z65:-_AY353259_other.z65__1506</Iteration_query-def>
|
jpayne@1
|
1153 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
1154 <Iteration_hits>
|
jpayne@1
|
1155 <Hit>
|
jpayne@1
|
1156 <Hit_num>1</Hit_num>
|
jpayne@1
|
1157 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1158 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1159 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1160 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1161 <Hit_hsps>
|
jpayne@1
|
1162 <Hsp>
|
jpayne@1
|
1163 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1164 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
1165 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
1166 <Hsp_evalue>3.09286e-128</Hsp_evalue>
|
jpayne@1
|
1167 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1168 <Hsp_query-to>483</Hsp_query-to>
|
jpayne@1
|
1169 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1170 <Hsp_hit-to>1260</Hsp_hit-to>
|
jpayne@1
|
1171 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1172 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1173 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
1174 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
1175 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
1176 <Hsp_align-len>485</Hsp_align-len>
|
jpayne@1
|
1177 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCCCAGTCCGCTCTGGGCACTGCTATCGAACGTCTGTCTTCCGGTCTGCGTATCAACAGCGCAAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGTTTTACCGCCAACATCAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCACTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCGGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTTTCCGGCCAGACCCAGTTCAACGGCGTGAAAGTTCTGGCACAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG-AAA</Hsp_qseq>
|
jpayne@1
|
1178 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAA</Hsp_hseq>
|
jpayne@1
|
1179 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| | | ||||| || |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || | || |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| || ||||| ||||| |||||||||||||||||||||||||| || | |||||| | | ||| | || ||||| | || || || | || ||||||| ||||| || | | |||||| | |||||||| || ||||| ||||| || || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| ||||||||| |||</Hsp_midline>
|
jpayne@1
|
1180 </Hsp>
|
jpayne@1
|
1181 <Hsp>
|
jpayne@1
|
1182 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1183 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
1184 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
1185 <Hsp_evalue>3.43912e-53</Hsp_evalue>
|
jpayne@1
|
1186 <Hsp_query-from>1309</Hsp_query-from>
|
jpayne@1
|
1187 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
1188 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
1189 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1190 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1191 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1192 <Hsp_identity>169</Hsp_identity>
|
jpayne@1
|
1193 <Hsp_positive>169</Hsp_positive>
|
jpayne@1
|
1194 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1195 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
1196 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACCTCCGTTCTGGCACAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1197 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1198 <Hsp_midline>|||||||| | || || || |||||||| ||||| || |||| ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1199 </Hsp>
|
jpayne@1
|
1200 </Hit_hsps>
|
jpayne@1
|
1201 </Hit>
|
jpayne@1
|
1202 </Iteration_hits>
|
jpayne@1
|
1203 <Iteration_stat>
|
jpayne@1
|
1204 <Statistics>
|
jpayne@1
|
1205 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1206 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1207 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1208 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
1209 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1210 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1211 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1212 </Statistics>
|
jpayne@1
|
1213 </Iteration_stat>
|
jpayne@1
|
1214 </Iteration>
|
jpayne@1
|
1215 <Iteration>
|
jpayne@1
|
1216 <Iteration_iter-num>57</Iteration_iter-num>
|
jpayne@1
|
1217 <Iteration_query-ID>Query_57</Iteration_query-ID>
|
jpayne@1
|
1218 <Iteration_query-def>fliC_z81_Salmonella.bongori_66:z81:-_AY353260_other.z81__1485</Iteration_query-def>
|
jpayne@1
|
1219 <Iteration_query-len>1485</Iteration_query-len>
|
jpayne@1
|
1220 <Iteration_hits>
|
jpayne@1
|
1221 <Hit>
|
jpayne@1
|
1222 <Hit_num>1</Hit_num>
|
jpayne@1
|
1223 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1224 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1225 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1226 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1227 <Hit_hsps>
|
jpayne@1
|
1228 <Hsp>
|
jpayne@1
|
1229 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1230 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
1231 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
1232 <Hsp_evalue>6.55386e-130</Hsp_evalue>
|
jpayne@1
|
1233 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1234 <Hsp_query-to>483</Hsp_query-to>
|
jpayne@1
|
1235 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1236 <Hsp_hit-to>1260</Hsp_hit-to>
|
jpayne@1
|
1237 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1238 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1239 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
1240 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
1241 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
1242 <Hsp_align-len>485</Hsp_align-len>
|
jpayne@1
|
1243 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCCCAGTCCGCTCTGGGCACTGCTATCGAACGTCTGTCTTCCGGTCTGCGTATCAACAGCGCAAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGTTTTACCGCCAACATCAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCGGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTTTCCGGCCAGACCCAGTTCAACGGCGTGAAAGTTCTGGCACAGGACAACACCCTGACCATCCAGGTCGGCGCTAACGACGGTGAAACCATCGATATCGATCTG-AAA</Hsp_qseq>
|
jpayne@1
|
1244 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAA</Hsp_hseq>
|
jpayne@1
|
1245 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| | | ||||| || |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || | || |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| ||||| || | | |||||| | |||||||| || ||||| ||||| || || ||||| || ||||| ||| | ||||||||| ||| |||||||| || |||||||| ||||||||||| ||||||||| |||</Hsp_midline>
|
jpayne@1
|
1246 </Hsp>
|
jpayne@1
|
1247 <Hsp>
|
jpayne@1
|
1248 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1249 <Hsp_bit-score>191.325</Hsp_bit-score>
|
jpayne@1
|
1250 <Hsp_score>103</Hsp_score>
|
jpayne@1
|
1251 <Hsp_evalue>2.04061e-50</Hsp_evalue>
|
jpayne@1
|
1252 <Hsp_query-from>1230</Hsp_query-from>
|
jpayne@1
|
1253 <Hsp_query-to>1485</Hsp_query-to>
|
jpayne@1
|
1254 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
1255 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1256 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1257 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1258 <Hsp_identity>206</Hsp_identity>
|
jpayne@1
|
1259 <Hsp_positive>206</Hsp_positive>
|
jpayne@1
|
1260 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1261 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
1262 <Hsp_qseq>AATCGATGCTGCGCTGGCACAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTTTCCAACATGTCTCGCGCGCAGATCCTGCAGCAGGCAGGGACCTCCGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1263 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1264 <Hsp_midline>||| ||| |||| || || | ||||| || | |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||| ||||||||||| || || ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1265 </Hsp>
|
jpayne@1
|
1266 </Hit_hsps>
|
jpayne@1
|
1267 </Hit>
|
jpayne@1
|
1268 </Iteration_hits>
|
jpayne@1
|
1269 <Iteration_stat>
|
jpayne@1
|
1270 <Statistics>
|
jpayne@1
|
1271 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1272 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1273 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1274 <Statistics_eff-space>80239032</Statistics_eff-space>
|
jpayne@1
|
1275 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1276 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1277 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1278 </Statistics>
|
jpayne@1
|
1279 </Iteration_stat>
|
jpayne@1
|
1280 </Iteration>
|
jpayne@1
|
1281 <Iteration>
|
jpayne@1
|
1282 <Iteration_iter-num>58</Iteration_iter-num>
|
jpayne@1
|
1283 <Iteration_query-ID>Query_58</Iteration_query-ID>
|
jpayne@1
|
1284 <Iteration_query-def>fliC_z81_Salmonella.bongori_40:z81:-_AY353261_other.z81__1485</Iteration_query-def>
|
jpayne@1
|
1285 <Iteration_query-len>1485</Iteration_query-len>
|
jpayne@1
|
1286 <Iteration_hits>
|
jpayne@1
|
1287 <Hit>
|
jpayne@1
|
1288 <Hit_num>1</Hit_num>
|
jpayne@1
|
1289 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1290 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1291 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1292 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1293 <Hit_hsps>
|
jpayne@1
|
1294 <Hsp>
|
jpayne@1
|
1295 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1296 <Hsp_bit-score>475.709</Hsp_bit-score>
|
jpayne@1
|
1297 <Hsp_score>257</Hsp_score>
|
jpayne@1
|
1298 <Hsp_evalue>5.03073e-136</Hsp_evalue>
|
jpayne@1
|
1299 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1300 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
1301 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1302 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
1303 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1304 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1305 <Hsp_identity>398</Hsp_identity>
|
jpayne@1
|
1306 <Hsp_positive>398</Hsp_positive>
|
jpayne@1
|
1307 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1308 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
1309 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCCCAGTCCGCTCTGGGCACTGCTATCGAACGTCTGTCTTCCGGTCTGCGTATCAACAGCGCAAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGTTTTACCGCCAACATCAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCTGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCACAGGACAACACCCTGACCATCCAGGTCGGCGCTAACGACGGTGAAACCAT</Hsp_qseq>
|
jpayne@1
|
1310 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
1311 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| | | ||||| || |||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||| || || | || |||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || ||| ||||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||| || |||||||| |||||||||||</Hsp_midline>
|
jpayne@1
|
1312 </Hsp>
|
jpayne@1
|
1313 <Hsp>
|
jpayne@1
|
1314 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1315 <Hsp_bit-score>195.019</Hsp_bit-score>
|
jpayne@1
|
1316 <Hsp_score>105</Hsp_score>
|
jpayne@1
|
1317 <Hsp_evalue>1.57748e-51</Hsp_evalue>
|
jpayne@1
|
1318 <Hsp_query-from>1288</Hsp_query-from>
|
jpayne@1
|
1319 <Hsp_query-to>1485</Hsp_query-to>
|
jpayne@1
|
1320 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
1321 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1322 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1323 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1324 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
1325 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
1326 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1327 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
1328 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTTTCCAACATGTCTCGCGCGCAGATCCTGCAGCAGGCAGGGACCTCCGTTCTGGCACAGGCGAACCAGGTACCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1329 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1330 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||| ||||||||||| || || ||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1331 </Hsp>
|
jpayne@1
|
1332 </Hit_hsps>
|
jpayne@1
|
1333 </Hit>
|
jpayne@1
|
1334 </Iteration_hits>
|
jpayne@1
|
1335 <Iteration_stat>
|
jpayne@1
|
1336 <Statistics>
|
jpayne@1
|
1337 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1338 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1339 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1340 <Statistics_eff-space>80239032</Statistics_eff-space>
|
jpayne@1
|
1341 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1342 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1343 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1344 </Statistics>
|
jpayne@1
|
1345 </Iteration_stat>
|
jpayne@1
|
1346 </Iteration>
|
jpayne@1
|
1347 <Iteration>
|
jpayne@1
|
1348 <Iteration_iter-num>59</Iteration_iter-num>
|
jpayne@1
|
1349 <Iteration_query-ID>Query_59</Iteration_query-ID>
|
jpayne@1
|
1350 <Iteration_query-def>fliC_a_Salmonella.enterica_Paratyphi.A_AY353356_other.a__1488</Iteration_query-def>
|
jpayne@1
|
1351 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
1352 <Iteration_hits>
|
jpayne@1
|
1353 <Hit>
|
jpayne@1
|
1354 <Hit_num>1</Hit_num>
|
jpayne@1
|
1355 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1356 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1357 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1358 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1359 <Hit_hsps>
|
jpayne@1
|
1360 <Hsp>
|
jpayne@1
|
1361 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1362 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
1363 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
1364 <Hsp_evalue>6.47499e-140</Hsp_evalue>
|
jpayne@1
|
1365 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1366 <Hsp_query-to>483</Hsp_query-to>
|
jpayne@1
|
1367 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1368 <Hsp_hit-to>1260</Hsp_hit-to>
|
jpayne@1
|
1369 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1370 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1371 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
1372 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
1373 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
1374 <Hsp_align-len>485</Hsp_align-len>
|
jpayne@1
|
1375 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATTGATATCGATCTG-AAA</Hsp_qseq>
|
jpayne@1
|
1376 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAA</Hsp_hseq>
|
jpayne@1
|
1377 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||||||| ||||||||| |||</Hsp_midline>
|
jpayne@1
|
1378 </Hsp>
|
jpayne@1
|
1379 <Hsp>
|
jpayne@1
|
1380 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1381 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
1382 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
1383 <Hsp_evalue>3.37357e-58</Hsp_evalue>
|
jpayne@1
|
1384 <Hsp_query-from>1267</Hsp_query-from>
|
jpayne@1
|
1385 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
1386 <Hsp_hit-from>447</Hsp_hit-from>
|
jpayne@1
|
1387 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1388 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1389 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1390 <Hsp_identity>188</Hsp_identity>
|
jpayne@1
|
1391 <Hsp_positive>188</Hsp_positive>
|
jpayne@1
|
1392 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1393 <Hsp_align-len>223</Hsp_align-len>
|
jpayne@1
|
1394 <Hsp_qseq>CGTTCTGACT-TGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATCCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1395 <Hsp_hseq>CGTTCT-TCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1396 <Hsp_midline>|||||| || |||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1397 </Hsp>
|
jpayne@1
|
1398 </Hit_hsps>
|
jpayne@1
|
1399 </Hit>
|
jpayne@1
|
1400 </Iteration_hits>
|
jpayne@1
|
1401 <Iteration_stat>
|
jpayne@1
|
1402 <Statistics>
|
jpayne@1
|
1403 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1404 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1405 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1406 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
1407 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1408 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1409 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1410 </Statistics>
|
jpayne@1
|
1411 </Iteration_stat>
|
jpayne@1
|
1412 </Iteration>
|
jpayne@1
|
1413 <Iteration>
|
jpayne@1
|
1414 <Iteration_iter-num>60</Iteration_iter-num>
|
jpayne@1
|
1415 <Iteration_query-ID>Query_60</Iteration_query-ID>
|
jpayne@1
|
1416 <Iteration_query-def>fliC_a_Salmonella.enterica_Paratyphi.A_AY353357_other.a__1488</Iteration_query-def>
|
jpayne@1
|
1417 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
1418 <Iteration_hits>
|
jpayne@1
|
1419 <Hit>
|
jpayne@1
|
1420 <Hit_num>1</Hit_num>
|
jpayne@1
|
1421 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1422 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1423 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1424 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1425 <Hit_hsps>
|
jpayne@1
|
1426 <Hsp>
|
jpayne@1
|
1427 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1428 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
1429 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
1430 <Hsp_evalue>6.47499e-140</Hsp_evalue>
|
jpayne@1
|
1431 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1432 <Hsp_query-to>483</Hsp_query-to>
|
jpayne@1
|
1433 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1434 <Hsp_hit-to>1260</Hsp_hit-to>
|
jpayne@1
|
1435 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1436 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1437 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
1438 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
1439 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
1440 <Hsp_align-len>485</Hsp_align-len>
|
jpayne@1
|
1441 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATTGATATCGATCTG-AAA</Hsp_qseq>
|
jpayne@1
|
1442 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAA</Hsp_hseq>
|
jpayne@1
|
1443 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||||||| ||||||||| |||</Hsp_midline>
|
jpayne@1
|
1444 </Hsp>
|
jpayne@1
|
1445 <Hsp>
|
jpayne@1
|
1446 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1447 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
1448 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
1449 <Hsp_evalue>3.37357e-58</Hsp_evalue>
|
jpayne@1
|
1450 <Hsp_query-from>1267</Hsp_query-from>
|
jpayne@1
|
1451 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
1452 <Hsp_hit-from>447</Hsp_hit-from>
|
jpayne@1
|
1453 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1454 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1455 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1456 <Hsp_identity>188</Hsp_identity>
|
jpayne@1
|
1457 <Hsp_positive>188</Hsp_positive>
|
jpayne@1
|
1458 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1459 <Hsp_align-len>223</Hsp_align-len>
|
jpayne@1
|
1460 <Hsp_qseq>CGTTCTGACT-TGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATCCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1461 <Hsp_hseq>CGTTCT-TCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1462 <Hsp_midline>|||||| || |||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1463 </Hsp>
|
jpayne@1
|
1464 </Hit_hsps>
|
jpayne@1
|
1465 </Hit>
|
jpayne@1
|
1466 </Iteration_hits>
|
jpayne@1
|
1467 <Iteration_stat>
|
jpayne@1
|
1468 <Statistics>
|
jpayne@1
|
1469 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1470 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1471 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1472 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
1473 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1474 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1475 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1476 </Statistics>
|
jpayne@1
|
1477 </Iteration_stat>
|
jpayne@1
|
1478 </Iteration>
|
jpayne@1
|
1479 <Iteration>
|
jpayne@1
|
1480 <Iteration_iter-num>61</Iteration_iter-num>
|
jpayne@1
|
1481 <Iteration_query-ID>Query_61</Iteration_query-ID>
|
jpayne@1
|
1482 <Iteration_query-def>fliC_a_Salmonella.enterica_from-cdc-Stk2184_other.a__1488</Iteration_query-def>
|
jpayne@1
|
1483 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
1484 <Iteration_hits>
|
jpayne@1
|
1485 <Hit>
|
jpayne@1
|
1486 <Hit_num>1</Hit_num>
|
jpayne@1
|
1487 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1488 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1489 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1490 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1491 <Hit_hsps>
|
jpayne@1
|
1492 <Hsp>
|
jpayne@1
|
1493 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1494 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
1495 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
1496 <Hsp_evalue>1.41154e-131</Hsp_evalue>
|
jpayne@1
|
1497 <Hsp_query-from>1009</Hsp_query-from>
|
jpayne@1
|
1498 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
1499 <Hsp_hit-from>1264</Hsp_hit-from>
|
jpayne@1
|
1500 <Hsp_hit-to>1743</Hsp_hit-to>
|
jpayne@1
|
1501 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1502 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
1503 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
1504 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
1505 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1506 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
1507 <Hsp_qseq>CAGATCGATATCGATAGTTTCACCGTCATTGGCGCCAACCTGGATGGTCAGGGTGTTGTCCTGCGCCAGGACTTTCACGCCGTTGAACTGGGTCTGGCCGGATACACGGTCGATTTCGTTCAGACGCTGGGTG-ATTTCAGCCTGGATGGAGTCAAGGTCAGACTGGGAGTTGGTGCTGTTAGCAGACTGAACTGCCAGTTCACGCACGCGCTGCAAGTTGTTGTTGATTTCGTTCAGCGCGCCTTCAGTGGTCTGCGCAATAGAAATACCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTAATGTTCGCGGTGAAACGGTTAGCAATCGCCTGACCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCGGAAGACAAACGCTCGATAGCGGTGCCCAGTGCGGACTGGGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_qseq>
|
jpayne@1
|
1508 <Hsp_hseq>CAGATCGATGGTAATGGTTTCACCATCGTTAGCACCAACCTGGATTTTCATCTGGTTGTCCTGAGACAGGACTTTAACACCGTTAAATTGAGTCTGATTAGAAACGCGATCGATTTCTTCCAGACG-TTGCTGAATTTCATCCTGGATAGATTTCAGATCGGAATCAGAGTTAGTCCCGTTAGTGGCCTGAACAGACAACTCACGCACACGCTGCAGGTTGTTGTTAATTTCATTCAGCGCACCTTCAGTGGTCTGCGCAATAGAAATGCCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTGATATTAGAAGTGAAGCGGTTAGCAATCGCCTGGCCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAGGACAGACGCTCAATAGCGGAACTCAGTGAGGACTGAGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_hseq>
|
jpayne@1
|
1509 <Hsp_midline>||||||||| || |||||||| || || || ||||||||||| ||| ||||||||| | ||||||||| || ||||| || || ||||| || || || |||||||| | |||||| | | || |||||| ||||||| || | || || || | ||||| || | ||||| | |||||| | || |||||||| ||||||| ||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || | ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || |||| |||||| ||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1510 </Hsp>
|
jpayne@1
|
1511 <Hsp>
|
jpayne@1
|
1512 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1513 <Hsp_bit-score>222.718</Hsp_bit-score>
|
jpayne@1
|
1514 <Hsp_score>120</Hsp_score>
|
jpayne@1
|
1515 <Hsp_evalue>7.25101e-60</Hsp_evalue>
|
jpayne@1
|
1516 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1517 <Hsp_query-to>222</Hsp_query-to>
|
jpayne@1
|
1518 <Hsp_hit-from>226</Hsp_hit-from>
|
jpayne@1
|
1519 <Hsp_hit-to>447</Hsp_hit-to>
|
jpayne@1
|
1520 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1521 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
1522 <Hsp_identity>189</Hsp_identity>
|
jpayne@1
|
1523 <Hsp_positive>189</Hsp_positive>
|
jpayne@1
|
1524 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1525 <Hsp_align-len>223</Hsp_align-len>
|
jpayne@1
|
1526 <Hsp_qseq>TTAACGCAGTAAAGAGAGGACGTTTTGCGGAACCTGGTTAGCCTGCGCCAGAACGGAAGTACCGGCCTGTTGCAGAATCTGCGCGCGAGACATGTTGGAAACTTCAGTCGCATAGTCGGAATCTTCGATACGGCTACGCGCTTCAGA-CAGGTTGTTTACGGTATTGCCCAGGTTGGTGATAGCGGAGTTGAAACGGTTTTGTACCGCACCCAGATCAGAACG</Hsp_qseq>
|
jpayne@1
|
1527 <Hsp_hseq>TTAACGCAGTAAAGAGAGGACGTTTTGCGGAACCTGGTTCGCCTGCGCCAGAACGGAAGTACCAGCCTGCTGCAGAATCTGCGCTTTAGACATATTAGAAACTTCCGTTGCATAGTCAGCATCTTCGATACGGCTACGGGCGG-AGTTCAGATTGGTTACCGTATTGCCAAGGTTGGTAATGGCTGAATCAAAACGGTTTTGAATTGCCCCCAGAGAAGAACG</Hsp_hseq>
|
jpayne@1
|
1528 <Hsp_midline>||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||| |||||||||||||| |||||| || |||||||| || |||||||| | |||||||||||||||||| || || ||| ||| |||| |||||||| |||||||| || || || | ||||||||||| | || |||||| ||||||</Hsp_midline>
|
jpayne@1
|
1529 </Hsp>
|
jpayne@1
|
1530 </Hit_hsps>
|
jpayne@1
|
1531 </Hit>
|
jpayne@1
|
1532 </Iteration_hits>
|
jpayne@1
|
1533 <Iteration_stat>
|
jpayne@1
|
1534 <Statistics>
|
jpayne@1
|
1535 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1536 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1537 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1538 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
1539 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1540 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1541 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1542 </Statistics>
|
jpayne@1
|
1543 </Iteration_stat>
|
jpayne@1
|
1544 </Iteration>
|
jpayne@1
|
1545 <Iteration>
|
jpayne@1
|
1546 <Iteration_iter-num>62</Iteration_iter-num>
|
jpayne@1
|
1547 <Iteration_query-ID>Query_62</Iteration_query-ID>
|
jpayne@1
|
1548 <Iteration_query-def>fliC_b_Salmonella.enterica_Paratyphi.B_AY353358_b,d,j__1488</Iteration_query-def>
|
jpayne@1
|
1549 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
1550 <Iteration_hits>
|
jpayne@1
|
1551 <Hit>
|
jpayne@1
|
1552 <Hit_num>1</Hit_num>
|
jpayne@1
|
1553 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1554 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1555 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1556 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1557 <Hit_hsps>
|
jpayne@1
|
1558 <Hsp>
|
jpayne@1
|
1559 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1560 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
1561 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
1562 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
1563 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1564 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
1565 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1566 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
1567 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1568 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1569 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
1570 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
1571 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1572 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
1573 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
1574 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
1575 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
1576 </Hsp>
|
jpayne@1
|
1577 <Hsp>
|
jpayne@1
|
1578 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1579 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
1580 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
1581 <Hsp_evalue>3.37357e-58</Hsp_evalue>
|
jpayne@1
|
1582 <Hsp_query-from>1219</Hsp_query-from>
|
jpayne@1
|
1583 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
1584 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
1585 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1586 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1587 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1588 <Hsp_identity>221</Hsp_identity>
|
jpayne@1
|
1589 <Hsp_positive>221</Hsp_positive>
|
jpayne@1
|
1590 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
1591 <Hsp_align-len>272</Hsp_align-len>
|
jpayne@1
|
1592 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAAGTTGATGCGCTGCGTTCTGACT-TGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCCCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1593 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCT-TCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1594 <Hsp_midline>||||| |||||| ||||||| | || || | |||| || || | |||||| || |||| || |||| |||||||| | || || || |||||||| |||||||| |||| ||| ||| || ||||||||||||||||||||| | ||||| || || ||||| || || ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1595 </Hsp>
|
jpayne@1
|
1596 </Hit_hsps>
|
jpayne@1
|
1597 </Hit>
|
jpayne@1
|
1598 </Iteration_hits>
|
jpayne@1
|
1599 <Iteration_stat>
|
jpayne@1
|
1600 <Statistics>
|
jpayne@1
|
1601 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1602 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1603 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1604 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
1605 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1606 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1607 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1608 </Statistics>
|
jpayne@1
|
1609 </Iteration_stat>
|
jpayne@1
|
1610 </Iteration>
|
jpayne@1
|
1611 <Iteration>
|
jpayne@1
|
1612 <Iteration_iter-num>63</Iteration_iter-num>
|
jpayne@1
|
1613 <Iteration_query-ID>Query_63</Iteration_query-ID>
|
jpayne@1
|
1614 <Iteration_query-def>fliC_b_Salmonella.enterica_from-cdc_Stk1415_b,d,j__1488</Iteration_query-def>
|
jpayne@1
|
1615 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
1616 <Iteration_hits>
|
jpayne@1
|
1617 <Hit>
|
jpayne@1
|
1618 <Hit_num>1</Hit_num>
|
jpayne@1
|
1619 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1620 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1621 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1622 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1623 <Hit_hsps>
|
jpayne@1
|
1624 <Hsp>
|
jpayne@1
|
1625 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1626 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
1627 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
1628 <Hsp_evalue>3.03391e-133</Hsp_evalue>
|
jpayne@1
|
1629 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1630 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
1631 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1632 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
1633 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1634 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1635 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
1636 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
1637 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1638 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
1639 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGCGTGCGTGAACTGGCAGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACCCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
1640 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
1641 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||| || || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || || || |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
1642 </Hsp>
|
jpayne@1
|
1643 <Hsp>
|
jpayne@1
|
1644 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1645 <Hsp_bit-score>211.638</Hsp_bit-score>
|
jpayne@1
|
1646 <Hsp_score>114</Hsp_score>
|
jpayne@1
|
1647 <Hsp_evalue>1.56957e-56</Hsp_evalue>
|
jpayne@1
|
1648 <Hsp_query-from>1291</Hsp_query-from>
|
jpayne@1
|
1649 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
1650 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
1651 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1652 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1653 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1654 <Hsp_identity>171</Hsp_identity>
|
jpayne@1
|
1655 <Hsp_positive>171</Hsp_positive>
|
jpayne@1
|
1656 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1657 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
1658 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAACAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1659 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1660 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||| ||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1661 </Hsp>
|
jpayne@1
|
1662 </Hit_hsps>
|
jpayne@1
|
1663 </Hit>
|
jpayne@1
|
1664 </Iteration_hits>
|
jpayne@1
|
1665 <Iteration_stat>
|
jpayne@1
|
1666 <Statistics>
|
jpayne@1
|
1667 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1668 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1669 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1670 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
1671 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1672 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1673 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1674 </Statistics>
|
jpayne@1
|
1675 </Iteration_stat>
|
jpayne@1
|
1676 </Iteration>
|
jpayne@1
|
1677 <Iteration>
|
jpayne@1
|
1678 <Iteration_iter-num>64</Iteration_iter-num>
|
jpayne@1
|
1679 <Iteration_query-ID>Query_64</Iteration_query-ID>
|
jpayne@1
|
1680 <Iteration_query-def>fliC_b_Salmonella.enterica_Paratyphi.B_AY353359_b,d,j__1488</Iteration_query-def>
|
jpayne@1
|
1681 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
1682 <Iteration_hits>
|
jpayne@1
|
1683 <Hit>
|
jpayne@1
|
1684 <Hit_num>1</Hit_num>
|
jpayne@1
|
1685 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1686 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1687 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1688 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1689 <Hit_hsps>
|
jpayne@1
|
1690 <Hsp>
|
jpayne@1
|
1691 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1692 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
1693 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
1694 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
1695 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1696 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
1697 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1698 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
1699 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1700 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1701 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
1702 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
1703 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1704 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
1705 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
1706 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
1707 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
1708 </Hsp>
|
jpayne@1
|
1709 <Hsp>
|
jpayne@1
|
1710 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1711 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
1712 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
1713 <Hsp_evalue>3.37357e-58</Hsp_evalue>
|
jpayne@1
|
1714 <Hsp_query-from>1219</Hsp_query-from>
|
jpayne@1
|
1715 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
1716 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
1717 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1718 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1719 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1720 <Hsp_identity>221</Hsp_identity>
|
jpayne@1
|
1721 <Hsp_positive>221</Hsp_positive>
|
jpayne@1
|
1722 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
1723 <Hsp_align-len>272</Hsp_align-len>
|
jpayne@1
|
1724 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAAGTTGATGCGCTGCGTTCTGACT-TGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCCCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1725 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCT-TCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1726 <Hsp_midline>||||| |||||| ||||||| | || || | |||| || || | |||||| || |||| || |||| |||||||| | || || || |||||||| |||||||| |||| ||| ||| || ||||||||||||||||||||| | ||||| || || ||||| || || ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1727 </Hsp>
|
jpayne@1
|
1728 </Hit_hsps>
|
jpayne@1
|
1729 </Hit>
|
jpayne@1
|
1730 </Iteration_hits>
|
jpayne@1
|
1731 <Iteration_stat>
|
jpayne@1
|
1732 <Statistics>
|
jpayne@1
|
1733 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1734 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1735 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1736 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
1737 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1738 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1739 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1740 </Statistics>
|
jpayne@1
|
1741 </Iteration_stat>
|
jpayne@1
|
1742 </Iteration>
|
jpayne@1
|
1743 <Iteration>
|
jpayne@1
|
1744 <Iteration_iter-num>65</Iteration_iter-num>
|
jpayne@1
|
1745 <Iteration_query-ID>Query_65</Iteration_query-ID>
|
jpayne@1
|
1746 <Iteration_query-def>fliC_b_Salmonella.enterica_Niederoderwitz_AY353360_b,d,j__1488</Iteration_query-def>
|
jpayne@1
|
1747 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
1748 <Iteration_hits>
|
jpayne@1
|
1749 <Hit>
|
jpayne@1
|
1750 <Hit_num>1</Hit_num>
|
jpayne@1
|
1751 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1752 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1753 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1754 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1755 <Hit_hsps>
|
jpayne@1
|
1756 <Hsp>
|
jpayne@1
|
1757 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1758 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
1759 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
1760 <Hsp_evalue>6.47499e-140</Hsp_evalue>
|
jpayne@1
|
1761 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1762 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
1763 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1764 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
1765 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1766 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1767 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
1768 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
1769 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1770 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
1771 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCAGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGCTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
1772 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
1773 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
1774 </Hsp>
|
jpayne@1
|
1775 <Hsp>
|
jpayne@1
|
1776 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1777 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
1778 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
1779 <Hsp_evalue>3.37357e-58</Hsp_evalue>
|
jpayne@1
|
1780 <Hsp_query-from>1219</Hsp_query-from>
|
jpayne@1
|
1781 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
1782 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
1783 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1784 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1785 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1786 <Hsp_identity>220</Hsp_identity>
|
jpayne@1
|
1787 <Hsp_positive>220</Hsp_positive>
|
jpayne@1
|
1788 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1789 <Hsp_align-len>271</Hsp_align-len>
|
jpayne@1
|
1790 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAAGTTGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1791 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1792 <Hsp_midline>||||| |||||| ||||||| | || || | |||| || || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| ||| ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1793 </Hsp>
|
jpayne@1
|
1794 </Hit_hsps>
|
jpayne@1
|
1795 </Hit>
|
jpayne@1
|
1796 </Iteration_hits>
|
jpayne@1
|
1797 <Iteration_stat>
|
jpayne@1
|
1798 <Statistics>
|
jpayne@1
|
1799 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1800 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1801 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1802 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
1803 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1804 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1805 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1806 </Statistics>
|
jpayne@1
|
1807 </Iteration_stat>
|
jpayne@1
|
1808 </Iteration>
|
jpayne@1
|
1809 <Iteration>
|
jpayne@1
|
1810 <Iteration_iter-num>66</Iteration_iter-num>
|
jpayne@1
|
1811 <Iteration_query-ID>Query_66</Iteration_query-ID>
|
jpayne@1
|
1812 <Iteration_query-def>fliC_b_Salmonella.enterica_I.6,7:b:z33_AY353361_b,d,j__1488</Iteration_query-def>
|
jpayne@1
|
1813 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
1814 <Iteration_hits>
|
jpayne@1
|
1815 <Hit>
|
jpayne@1
|
1816 <Hit_num>1</Hit_num>
|
jpayne@1
|
1817 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1818 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1819 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1820 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1821 <Hit_hsps>
|
jpayne@1
|
1822 <Hsp>
|
jpayne@1
|
1823 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1824 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
1825 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
1826 <Hsp_evalue>1.40159e-136</Hsp_evalue>
|
jpayne@1
|
1827 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1828 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
1829 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1830 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
1831 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1832 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1833 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
1834 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
1835 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1836 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
1837 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCAGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGCTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
1838 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
1839 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
1840 </Hsp>
|
jpayne@1
|
1841 <Hsp>
|
jpayne@1
|
1842 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1843 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
1844 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
1845 <Hsp_evalue>3.37357e-58</Hsp_evalue>
|
jpayne@1
|
1846 <Hsp_query-from>1219</Hsp_query-from>
|
jpayne@1
|
1847 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
1848 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
1849 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1850 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1851 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1852 <Hsp_identity>220</Hsp_identity>
|
jpayne@1
|
1853 <Hsp_positive>220</Hsp_positive>
|
jpayne@1
|
1854 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1855 <Hsp_align-len>271</Hsp_align-len>
|
jpayne@1
|
1856 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAAGTTGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACTTGGGCAATACCGTAAACAACCTG-TCTGAAGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCCCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1857 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1858 <Hsp_midline>||||| |||||| ||||||| | || || | |||| || || | |||||| ||||| || |||| |||||||| | || || || |||||| | |||||||| |||| ||| ||| || ||||||||||||||||||||| | ||||| || || ||||| || || ||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1859 </Hsp>
|
jpayne@1
|
1860 </Hit_hsps>
|
jpayne@1
|
1861 </Hit>
|
jpayne@1
|
1862 </Iteration_hits>
|
jpayne@1
|
1863 <Iteration_stat>
|
jpayne@1
|
1864 <Statistics>
|
jpayne@1
|
1865 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1866 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1867 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1868 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
1869 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1870 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1871 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1872 </Statistics>
|
jpayne@1
|
1873 </Iteration_stat>
|
jpayne@1
|
1874 </Iteration>
|
jpayne@1
|
1875 <Iteration>
|
jpayne@1
|
1876 <Iteration_iter-num>67</Iteration_iter-num>
|
jpayne@1
|
1877 <Iteration_query-ID>Query_67</Iteration_query-ID>
|
jpayne@1
|
1878 <Iteration_query-def>fliC_b_Salmonella.enterica_IIIb.6,14:b:e,n,x,z15_AY353362_b,d,j__1488</Iteration_query-def>
|
jpayne@1
|
1879 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
1880 <Iteration_hits>
|
jpayne@1
|
1881 <Hit>
|
jpayne@1
|
1882 <Hit_num>1</Hit_num>
|
jpayne@1
|
1883 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1884 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1885 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1886 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1887 <Hit_hsps>
|
jpayne@1
|
1888 <Hsp>
|
jpayne@1
|
1889 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1890 <Hsp_bit-score>510.796</Hsp_bit-score>
|
jpayne@1
|
1891 <Hsp_score>276</Hsp_score>
|
jpayne@1
|
1892 <Hsp_evalue>1.3819e-146</Hsp_evalue>
|
jpayne@1
|
1893 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1894 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
1895 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1896 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
1897 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1898 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1899 <Hsp_identity>413</Hsp_identity>
|
jpayne@1
|
1900 <Hsp_positive>413</Hsp_positive>
|
jpayne@1
|
1901 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1902 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
1903 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAGGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCACAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
1904 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
1905 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
1906 </Hsp>
|
jpayne@1
|
1907 <Hsp>
|
jpayne@1
|
1908 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1909 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
1910 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
1911 <Hsp_evalue>3.39752e-53</Hsp_evalue>
|
jpayne@1
|
1912 <Hsp_query-from>1291</Hsp_query-from>
|
jpayne@1
|
1913 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
1914 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
1915 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1916 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1917 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1918 <Hsp_identity>169</Hsp_identity>
|
jpayne@1
|
1919 <Hsp_positive>169</Hsp_positive>
|
jpayne@1
|
1920 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1921 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
1922 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCTGATTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1923 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1924 <Hsp_midline>|||||||| | || || || |||||||| ||||| || |||| ||| ||| || || |||||||||||||||||| |||| ||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1925 </Hsp>
|
jpayne@1
|
1926 </Hit_hsps>
|
jpayne@1
|
1927 </Hit>
|
jpayne@1
|
1928 </Iteration_hits>
|
jpayne@1
|
1929 <Iteration_stat>
|
jpayne@1
|
1930 <Statistics>
|
jpayne@1
|
1931 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1932 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1933 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
1934 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
1935 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
1936 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
1937 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
1938 </Statistics>
|
jpayne@1
|
1939 </Iteration_stat>
|
jpayne@1
|
1940 </Iteration>
|
jpayne@1
|
1941 <Iteration>
|
jpayne@1
|
1942 <Iteration_iter-num>68</Iteration_iter-num>
|
jpayne@1
|
1943 <Iteration_query-ID>Query_68</Iteration_query-ID>
|
jpayne@1
|
1944 <Iteration_query-def>fliC_b_Salmonella.enterica_IIIa.47:b:-_AY353363_b,d,j__1488</Iteration_query-def>
|
jpayne@1
|
1945 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
1946 <Iteration_hits>
|
jpayne@1
|
1947 <Hit>
|
jpayne@1
|
1948 <Hit_num>1</Hit_num>
|
jpayne@1
|
1949 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
1950 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
1951 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
1952 <Hit_len>1962</Hit_len>
|
jpayne@1
|
1953 <Hit_hsps>
|
jpayne@1
|
1954 <Hsp>
|
jpayne@1
|
1955 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
1956 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
1957 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
1958 <Hsp_evalue>6.47499e-140</Hsp_evalue>
|
jpayne@1
|
1959 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
1960 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
1961 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
1962 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
1963 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1964 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1965 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
1966 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
1967 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1968 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
1969 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCAGCAGGTCAGGCCATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGCTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACTATCCAGGTTGGCGCCAACGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
1970 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
1971 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
1972 </Hsp>
|
jpayne@1
|
1973 <Hsp>
|
jpayne@1
|
1974 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
1975 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
1976 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
1977 <Hsp_evalue>3.39752e-53</Hsp_evalue>
|
jpayne@1
|
1978 <Hsp_query-from>1276</Hsp_query-from>
|
jpayne@1
|
1979 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
1980 <Hsp_hit-from>438</Hsp_hit-from>
|
jpayne@1
|
1981 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
1982 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
1983 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
1984 <Hsp_identity>179</Hsp_identity>
|
jpayne@1
|
1985 <Hsp_positive>179</Hsp_positive>
|
jpayne@1
|
1986 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
1987 <Hsp_align-len>214</Hsp_align-len>
|
jpayne@1
|
1988 <Hsp_qseq>CTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAATCTGGGCAATACTGTAAACAACTTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGTGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
1989 <Hsp_hseq>CTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
1990 <Hsp_midline>||||| || |||| |||||||| | || || || ||||| || |||||||| |||| ||| || || || |||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
1991 </Hsp>
|
jpayne@1
|
1992 </Hit_hsps>
|
jpayne@1
|
1993 </Hit>
|
jpayne@1
|
1994 </Iteration_hits>
|
jpayne@1
|
1995 <Iteration_stat>
|
jpayne@1
|
1996 <Statistics>
|
jpayne@1
|
1997 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
1998 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
1999 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2000 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
2001 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2002 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2003 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2004 </Statistics>
|
jpayne@1
|
2005 </Iteration_stat>
|
jpayne@1
|
2006 </Iteration>
|
jpayne@1
|
2007 <Iteration>
|
jpayne@1
|
2008 <Iteration_iter-num>69</Iteration_iter-num>
|
jpayne@1
|
2009 <Iteration_query-ID>Query_69</Iteration_query-ID>
|
jpayne@1
|
2010 <Iteration_query-def>fliC_b_Salmonella.enterica_Urbana_No-upload-yet_b,d,j__1488</Iteration_query-def>
|
jpayne@1
|
2011 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
2012 <Iteration_hits>
|
jpayne@1
|
2013 <Hit>
|
jpayne@1
|
2014 <Hit_num>1</Hit_num>
|
jpayne@1
|
2015 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2016 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2017 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2018 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2019 <Hit_hsps>
|
jpayne@1
|
2020 <Hsp>
|
jpayne@1
|
2021 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2022 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
2023 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
2024 <Hsp_evalue>3.03391e-133</Hsp_evalue>
|
jpayne@1
|
2025 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2026 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
2027 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2028 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
2029 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2030 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2031 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
2032 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
2033 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2034 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
2035 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
2036 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
2037 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
2038 </Hsp>
|
jpayne@1
|
2039 <Hsp>
|
jpayne@1
|
2040 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2041 <Hsp_bit-score>222.718</Hsp_bit-score>
|
jpayne@1
|
2042 <Hsp_score>120</Hsp_score>
|
jpayne@1
|
2043 <Hsp_evalue>7.25101e-60</Hsp_evalue>
|
jpayne@1
|
2044 <Hsp_query-from>1267</Hsp_query-from>
|
jpayne@1
|
2045 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
2046 <Hsp_hit-from>447</Hsp_hit-from>
|
jpayne@1
|
2047 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2048 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2049 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2050 <Hsp_identity>190</Hsp_identity>
|
jpayne@1
|
2051 <Hsp_positive>190</Hsp_positive>
|
jpayne@1
|
2052 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
2053 <Hsp_align-len>224</Hsp_align-len>
|
jpayne@1
|
2054 <Hsp_qseq>CGTTCTGACT-TGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2055 <Hsp_hseq>CGTTCT-TCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2056 <Hsp_midline>|||||| || |||| || |||| |||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2057 </Hsp>
|
jpayne@1
|
2058 </Hit_hsps>
|
jpayne@1
|
2059 </Hit>
|
jpayne@1
|
2060 </Iteration_hits>
|
jpayne@1
|
2061 <Iteration_stat>
|
jpayne@1
|
2062 <Statistics>
|
jpayne@1
|
2063 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2064 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2065 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2066 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
2067 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2068 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2069 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2070 </Statistics>
|
jpayne@1
|
2071 </Iteration_stat>
|
jpayne@1
|
2072 </Iteration>
|
jpayne@1
|
2073 <Iteration>
|
jpayne@1
|
2074 <Iteration_iter-num>70</Iteration_iter-num>
|
jpayne@1
|
2075 <Iteration_query-ID>Query_70</Iteration_query-ID>
|
jpayne@1
|
2076 <Iteration_query-def>fliC_c_Salmonella.enterica_Choleraesuis_AY353364_other.c__1506</Iteration_query-def>
|
jpayne@1
|
2077 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
2078 <Iteration_hits>
|
jpayne@1
|
2079 <Hit>
|
jpayne@1
|
2080 <Hit_num>1</Hit_num>
|
jpayne@1
|
2081 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2082 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2083 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2084 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2085 <Hit_hsps>
|
jpayne@1
|
2086 <Hsp>
|
jpayne@1
|
2087 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2088 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
2089 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
2090 <Hsp_evalue>3.02791e-143</Hsp_evalue>
|
jpayne@1
|
2091 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2092 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
2093 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2094 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
2095 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2096 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2097 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
2098 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
2099 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2100 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
2101 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACTCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
2102 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
2103 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
2104 </Hsp>
|
jpayne@1
|
2105 <Hsp>
|
jpayne@1
|
2106 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2107 <Hsp_bit-score>230.105</Hsp_bit-score>
|
jpayne@1
|
2108 <Hsp_score>124</Hsp_score>
|
jpayne@1
|
2109 <Hsp_evalue>4.38628e-62</Hsp_evalue>
|
jpayne@1
|
2110 <Hsp_query-from>1251</Hsp_query-from>
|
jpayne@1
|
2111 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
2112 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2113 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2114 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2115 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2116 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
2117 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
2118 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
2119 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
2120 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2121 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2122 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2123 </Hsp>
|
jpayne@1
|
2124 </Hit_hsps>
|
jpayne@1
|
2125 </Hit>
|
jpayne@1
|
2126 </Iteration_hits>
|
jpayne@1
|
2127 <Iteration_stat>
|
jpayne@1
|
2128 <Statistics>
|
jpayne@1
|
2129 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2130 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2131 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2132 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
2133 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2134 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2135 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2136 </Statistics>
|
jpayne@1
|
2137 </Iteration_stat>
|
jpayne@1
|
2138 </Iteration>
|
jpayne@1
|
2139 <Iteration>
|
jpayne@1
|
2140 <Iteration_iter-num>71</Iteration_iter-num>
|
jpayne@1
|
2141 <Iteration_query-ID>Query_71</Iteration_query-ID>
|
jpayne@1
|
2142 <Iteration_query-def>fliC_c_Salmonella.enterica_Choleraesuis_AY353365_other.c__1506</Iteration_query-def>
|
jpayne@1
|
2143 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
2144 <Iteration_hits>
|
jpayne@1
|
2145 <Hit>
|
jpayne@1
|
2146 <Hit_num>1</Hit_num>
|
jpayne@1
|
2147 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2148 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2149 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2150 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2151 <Hit_hsps>
|
jpayne@1
|
2152 <Hsp>
|
jpayne@1
|
2153 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2154 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
2155 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
2156 <Hsp_evalue>3.02791e-143</Hsp_evalue>
|
jpayne@1
|
2157 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2158 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
2159 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2160 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
2161 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2162 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2163 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
2164 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
2165 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2166 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
2167 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACTCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
2168 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
2169 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
2170 </Hsp>
|
jpayne@1
|
2171 <Hsp>
|
jpayne@1
|
2172 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2173 <Hsp_bit-score>230.105</Hsp_bit-score>
|
jpayne@1
|
2174 <Hsp_score>124</Hsp_score>
|
jpayne@1
|
2175 <Hsp_evalue>4.38628e-62</Hsp_evalue>
|
jpayne@1
|
2176 <Hsp_query-from>1251</Hsp_query-from>
|
jpayne@1
|
2177 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
2178 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2179 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2180 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2181 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2182 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
2183 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
2184 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
2185 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
2186 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2187 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2188 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2189 </Hsp>
|
jpayne@1
|
2190 </Hit_hsps>
|
jpayne@1
|
2191 </Hit>
|
jpayne@1
|
2192 </Iteration_hits>
|
jpayne@1
|
2193 <Iteration_stat>
|
jpayne@1
|
2194 <Statistics>
|
jpayne@1
|
2195 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2196 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2197 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2198 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
2199 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2200 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2201 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2202 </Statistics>
|
jpayne@1
|
2203 </Iteration_stat>
|
jpayne@1
|
2204 </Iteration>
|
jpayne@1
|
2205 <Iteration>
|
jpayne@1
|
2206 <Iteration_iter-num>72</Iteration_iter-num>
|
jpayne@1
|
2207 <Iteration_query-ID>Query_72</Iteration_query-ID>
|
jpayne@1
|
2208 <Iteration_query-def>fliC_c_Salmonella.enterica_IIIb.57:c:z:z60_AY353366_other.c__1506</Iteration_query-def>
|
jpayne@1
|
2209 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
2210 <Iteration_hits>
|
jpayne@1
|
2211 <Hit>
|
jpayne@1
|
2212 <Hit_num>1</Hit_num>
|
jpayne@1
|
2213 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2214 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2215 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2216 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2217 <Hit_hsps>
|
jpayne@1
|
2218 <Hsp>
|
jpayne@1
|
2219 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2220 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
2221 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
2222 <Hsp_evalue>3.02791e-143</Hsp_evalue>
|
jpayne@1
|
2223 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2224 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
2225 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2226 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
2227 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2228 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2229 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
2230 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
2231 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2232 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
2233 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
2234 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
2235 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
2236 </Hsp>
|
jpayne@1
|
2237 <Hsp>
|
jpayne@1
|
2238 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2239 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
2240 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
2241 <Hsp_evalue>2.02635e-65</Hsp_evalue>
|
jpayne@1
|
2242 <Hsp_query-from>1251</Hsp_query-from>
|
jpayne@1
|
2243 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
2244 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2245 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2246 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2247 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2248 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
2249 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
2250 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2251 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
2252 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2253 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2254 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2255 </Hsp>
|
jpayne@1
|
2256 </Hit_hsps>
|
jpayne@1
|
2257 </Hit>
|
jpayne@1
|
2258 </Iteration_hits>
|
jpayne@1
|
2259 <Iteration_stat>
|
jpayne@1
|
2260 <Statistics>
|
jpayne@1
|
2261 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2262 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2263 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2264 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
2265 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2266 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2267 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2268 </Statistics>
|
jpayne@1
|
2269 </Iteration_stat>
|
jpayne@1
|
2270 </Iteration>
|
jpayne@1
|
2271 <Iteration>
|
jpayne@1
|
2272 <Iteration_iter-num>73</Iteration_iter-num>
|
jpayne@1
|
2273 <Iteration_query-ID>Query_73</Iteration_query-ID>
|
jpayne@1
|
2274 <Iteration_query-def>fliC_c_Salmonella.enterica_Jericho_AY353367_other.c__1506</Iteration_query-def>
|
jpayne@1
|
2275 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
2276 <Iteration_hits>
|
jpayne@1
|
2277 <Hit>
|
jpayne@1
|
2278 <Hit_num>1</Hit_num>
|
jpayne@1
|
2279 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2280 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2281 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2282 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2283 <Hit_hsps>
|
jpayne@1
|
2284 <Hsp>
|
jpayne@1
|
2285 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2286 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
2287 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
2288 <Hsp_evalue>3.04941e-138</Hsp_evalue>
|
jpayne@1
|
2289 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2290 <Hsp_query-to>483</Hsp_query-to>
|
jpayne@1
|
2291 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2292 <Hsp_hit-to>1260</Hsp_hit-to>
|
jpayne@1
|
2293 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2294 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2295 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
2296 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
2297 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
2298 <Hsp_align-len>485</Hsp_align-len>
|
jpayne@1
|
2299 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG-AAA</Hsp_qseq>
|
jpayne@1
|
2300 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAA</Hsp_hseq>
|
jpayne@1
|
2301 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| ||||||||| |||</Hsp_midline>
|
jpayne@1
|
2302 </Hsp>
|
jpayne@1
|
2303 <Hsp>
|
jpayne@1
|
2304 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2305 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
2306 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
2307 <Hsp_evalue>3.43912e-53</Hsp_evalue>
|
jpayne@1
|
2308 <Hsp_query-from>1294</Hsp_query-from>
|
jpayne@1
|
2309 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
2310 <Hsp_hit-from>438</Hsp_hit-from>
|
jpayne@1
|
2311 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2312 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2313 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2314 <Hsp_identity>178</Hsp_identity>
|
jpayne@1
|
2315 <Hsp_positive>178</Hsp_positive>
|
jpayne@1
|
2316 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
2317 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
2318 <Hsp_qseq>CTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAATAACCTGTCTTCTGCTCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTTTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2319 <Hsp_hseq>CTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2320 <Hsp_midline>||||| || |||| |||||||| | || || || |||||||| ||||| || |||| || ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2321 </Hsp>
|
jpayne@1
|
2322 </Hit_hsps>
|
jpayne@1
|
2323 </Hit>
|
jpayne@1
|
2324 </Iteration_hits>
|
jpayne@1
|
2325 <Iteration_stat>
|
jpayne@1
|
2326 <Statistics>
|
jpayne@1
|
2327 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2328 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2329 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2330 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
2331 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2332 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2333 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2334 </Statistics>
|
jpayne@1
|
2335 </Iteration_stat>
|
jpayne@1
|
2336 </Iteration>
|
jpayne@1
|
2337 <Iteration>
|
jpayne@1
|
2338 <Iteration_iter-num>74</Iteration_iter-num>
|
jpayne@1
|
2339 <Iteration_query-ID>Query_74</Iteration_query-ID>
|
jpayne@1
|
2340 <Iteration_query-def>fliC_c_Salmonella.enterica_Goeteborg_AY353368_other.c__1506</Iteration_query-def>
|
jpayne@1
|
2341 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
2342 <Iteration_hits>
|
jpayne@1
|
2343 <Hit>
|
jpayne@1
|
2344 <Hit_num>1</Hit_num>
|
jpayne@1
|
2345 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2346 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2347 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2348 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2349 <Hit_hsps>
|
jpayne@1
|
2350 <Hsp>
|
jpayne@1
|
2351 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2352 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
2353 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
2354 <Hsp_evalue>3.04941e-138</Hsp_evalue>
|
jpayne@1
|
2355 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2356 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
2357 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2358 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
2359 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2360 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2361 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
2362 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
2363 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2364 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
2365 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGGATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
2366 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
2367 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
2368 </Hsp>
|
jpayne@1
|
2369 <Hsp>
|
jpayne@1
|
2370 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2371 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
2372 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
2373 <Hsp_evalue>9.49462e-59</Hsp_evalue>
|
jpayne@1
|
2374 <Hsp_query-from>1251</Hsp_query-from>
|
jpayne@1
|
2375 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
2376 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2377 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2378 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2379 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2380 <Hsp_identity>210</Hsp_identity>
|
jpayne@1
|
2381 <Hsp_positive>210</Hsp_positive>
|
jpayne@1
|
2382 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
2383 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
2384 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGATGCGCTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2385 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2386 <Hsp_midline>||||||| |||| ||| || | || || || | |||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2387 </Hsp>
|
jpayne@1
|
2388 </Hit_hsps>
|
jpayne@1
|
2389 </Hit>
|
jpayne@1
|
2390 </Iteration_hits>
|
jpayne@1
|
2391 <Iteration_stat>
|
jpayne@1
|
2392 <Statistics>
|
jpayne@1
|
2393 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2394 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2395 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2396 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
2397 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2398 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2399 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2400 </Statistics>
|
jpayne@1
|
2401 </Iteration_stat>
|
jpayne@1
|
2402 </Iteration>
|
jpayne@1
|
2403 <Iteration>
|
jpayne@1
|
2404 <Iteration_iter-num>75</Iteration_iter-num>
|
jpayne@1
|
2405 <Iteration_query-ID>Query_75</Iteration_query-ID>
|
jpayne@1
|
2406 <Iteration_query-def>fliC_c_Salmonella.enterica_IIIb.41:c:e,n,x,z15_AY353369_other.c__1506</Iteration_query-def>
|
jpayne@1
|
2407 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
2408 <Iteration_hits>
|
jpayne@1
|
2409 <Hit>
|
jpayne@1
|
2410 <Hit_num>1</Hit_num>
|
jpayne@1
|
2411 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2412 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2413 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2414 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2415 <Hit_hsps>
|
jpayne@1
|
2416 <Hsp>
|
jpayne@1
|
2417 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2418 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
2419 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
2420 <Hsp_evalue>3.02791e-143</Hsp_evalue>
|
jpayne@1
|
2421 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2422 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
2423 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2424 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
2425 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2426 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2427 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
2428 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
2429 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2430 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
2431 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGTACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
2432 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
2433 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
2434 </Hsp>
|
jpayne@1
|
2435 <Hsp>
|
jpayne@1
|
2436 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2437 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
2438 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
2439 <Hsp_evalue>2.02635e-65</Hsp_evalue>
|
jpayne@1
|
2440 <Hsp_query-from>1251</Hsp_query-from>
|
jpayne@1
|
2441 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
2442 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2443 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2444 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2445 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2446 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
2447 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
2448 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2449 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
2450 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2451 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2452 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2453 </Hsp>
|
jpayne@1
|
2454 </Hit_hsps>
|
jpayne@1
|
2455 </Hit>
|
jpayne@1
|
2456 </Iteration_hits>
|
jpayne@1
|
2457 <Iteration_stat>
|
jpayne@1
|
2458 <Statistics>
|
jpayne@1
|
2459 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2460 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2461 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2462 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
2463 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2464 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2465 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2466 </Statistics>
|
jpayne@1
|
2467 </Iteration_stat>
|
jpayne@1
|
2468 </Iteration>
|
jpayne@1
|
2469 <Iteration>
|
jpayne@1
|
2470 <Iteration_iter-num>76</Iteration_iter-num>
|
jpayne@1
|
2471 <Iteration_query-ID>Query_76</Iteration_query-ID>
|
jpayne@1
|
2472 <Iteration_query-def>fliC_c_Salmonella.enterica_IIIb.57:c:e,n,x,z15_AY353370_other.c__1506</Iteration_query-def>
|
jpayne@1
|
2473 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
2474 <Iteration_hits>
|
jpayne@1
|
2475 <Hit>
|
jpayne@1
|
2476 <Hit_num>1</Hit_num>
|
jpayne@1
|
2477 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2478 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2479 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2480 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2481 <Hit_hsps>
|
jpayne@1
|
2482 <Hsp>
|
jpayne@1
|
2483 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2484 <Hsp_bit-score>494.176</Hsp_bit-score>
|
jpayne@1
|
2485 <Hsp_score>267</Hsp_score>
|
jpayne@1
|
2486 <Hsp_evalue>1.40875e-141</Hsp_evalue>
|
jpayne@1
|
2487 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2488 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
2489 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2490 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
2491 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2492 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2493 <Hsp_identity>410</Hsp_identity>
|
jpayne@1
|
2494 <Hsp_positive>410</Hsp_positive>
|
jpayne@1
|
2495 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2496 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
2497 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCACACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
2498 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
2499 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
2500 </Hsp>
|
jpayne@1
|
2501 <Hsp>
|
jpayne@1
|
2502 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2503 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
2504 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
2505 <Hsp_evalue>2.02635e-65</Hsp_evalue>
|
jpayne@1
|
2506 <Hsp_query-from>1251</Hsp_query-from>
|
jpayne@1
|
2507 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
2508 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2509 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2510 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2511 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2512 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
2513 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
2514 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2515 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
2516 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2517 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2518 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2519 </Hsp>
|
jpayne@1
|
2520 </Hit_hsps>
|
jpayne@1
|
2521 </Hit>
|
jpayne@1
|
2522 </Iteration_hits>
|
jpayne@1
|
2523 <Iteration_stat>
|
jpayne@1
|
2524 <Statistics>
|
jpayne@1
|
2525 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2526 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2527 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2528 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
2529 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2530 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2531 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2532 </Statistics>
|
jpayne@1
|
2533 </Iteration_stat>
|
jpayne@1
|
2534 </Iteration>
|
jpayne@1
|
2535 <Iteration>
|
jpayne@1
|
2536 <Iteration_iter-num>77</Iteration_iter-num>
|
jpayne@1
|
2537 <Iteration_query-ID>Query_77</Iteration_query-ID>
|
jpayne@1
|
2538 <Iteration_query-def>fliC_d_Salmonella.enterica_Schwarzengrund_AY353371_b,d,j__1521</Iteration_query-def>
|
jpayne@1
|
2539 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
2540 <Iteration_hits>
|
jpayne@1
|
2541 <Hit>
|
jpayne@1
|
2542 <Hit_num>1</Hit_num>
|
jpayne@1
|
2543 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2544 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2545 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2546 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2547 <Hit_hsps>
|
jpayne@1
|
2548 <Hsp>
|
jpayne@1
|
2549 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2550 <Hsp_bit-score>510.796</Hsp_bit-score>
|
jpayne@1
|
2551 <Hsp_score>276</Hsp_score>
|
jpayne@1
|
2552 <Hsp_evalue>1.41292e-146</Hsp_evalue>
|
jpayne@1
|
2553 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2554 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
2555 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2556 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
2557 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2558 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2559 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
2560 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
2561 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2562 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
2563 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGAGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
2564 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
2565 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
2566 </Hsp>
|
jpayne@1
|
2567 <Hsp>
|
jpayne@1
|
2568 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2569 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
2570 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
2571 <Hsp_evalue>9.52273e-64</Hsp_evalue>
|
jpayne@1
|
2572 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
2573 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
2574 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2575 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2576 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2577 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2578 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
2579 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
2580 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
2581 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
2582 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2583 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2584 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2585 </Hsp>
|
jpayne@1
|
2586 </Hit_hsps>
|
jpayne@1
|
2587 </Hit>
|
jpayne@1
|
2588 </Iteration_hits>
|
jpayne@1
|
2589 <Iteration_stat>
|
jpayne@1
|
2590 <Statistics>
|
jpayne@1
|
2591 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2592 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2593 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2594 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
2595 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2596 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2597 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2598 </Statistics>
|
jpayne@1
|
2599 </Iteration_stat>
|
jpayne@1
|
2600 </Iteration>
|
jpayne@1
|
2601 <Iteration>
|
jpayne@1
|
2602 <Iteration_iter-num>78</Iteration_iter-num>
|
jpayne@1
|
2603 <Iteration_query-ID>Query_78</Iteration_query-ID>
|
jpayne@1
|
2604 <Iteration_query-def>fliC_d_Salmonella.enterica_Virginia_AY353372_b,d,j__1521</Iteration_query-def>
|
jpayne@1
|
2605 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
2606 <Iteration_hits>
|
jpayne@1
|
2607 <Hit>
|
jpayne@1
|
2608 <Hit_num>1</Hit_num>
|
jpayne@1
|
2609 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2610 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2611 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2612 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2613 <Hit_hsps>
|
jpayne@1
|
2614 <Hsp>
|
jpayne@1
|
2615 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2616 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
2617 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
2618 <Hsp_evalue>6.57368e-145</Hsp_evalue>
|
jpayne@1
|
2619 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2620 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
2621 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2622 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
2623 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2624 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2625 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
2626 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
2627 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2628 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
2629 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
2630 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
2631 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
2632 </Hsp>
|
jpayne@1
|
2633 <Hsp>
|
jpayne@1
|
2634 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2635 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
2636 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
2637 <Hsp_evalue>9.59034e-59</Hsp_evalue>
|
jpayne@1
|
2638 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
2639 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
2640 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2641 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2642 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2643 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2644 <Hsp_identity>210</Hsp_identity>
|
jpayne@1
|
2645 <Hsp_positive>210</Hsp_positive>
|
jpayne@1
|
2646 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
2647 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
2648 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2649 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2650 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2651 </Hsp>
|
jpayne@1
|
2652 </Hit_hsps>
|
jpayne@1
|
2653 </Hit>
|
jpayne@1
|
2654 </Iteration_hits>
|
jpayne@1
|
2655 <Iteration_stat>
|
jpayne@1
|
2656 <Statistics>
|
jpayne@1
|
2657 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2658 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2659 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2660 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
2661 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2662 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2663 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2664 </Statistics>
|
jpayne@1
|
2665 </Iteration_stat>
|
jpayne@1
|
2666 </Iteration>
|
jpayne@1
|
2667 <Iteration>
|
jpayne@1
|
2668 <Iteration_iter-num>79</Iteration_iter-num>
|
jpayne@1
|
2669 <Iteration_query-ID>Query_79</Iteration_query-ID>
|
jpayne@1
|
2670 <Iteration_query-def>fliC_d_Salmonella.enterica_Muenchen_AY353373_b,d,j__1521</Iteration_query-def>
|
jpayne@1
|
2671 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
2672 <Iteration_hits>
|
jpayne@1
|
2673 <Hit>
|
jpayne@1
|
2674 <Hit_num>1</Hit_num>
|
jpayne@1
|
2675 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2676 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2677 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2678 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2679 <Hit_hsps>
|
jpayne@1
|
2680 <Hsp>
|
jpayne@1
|
2681 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2682 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
2683 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
2684 <Hsp_evalue>6.57368e-145</Hsp_evalue>
|
jpayne@1
|
2685 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2686 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
2687 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2688 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
2689 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2690 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2691 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
2692 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
2693 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2694 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
2695 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
2696 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
2697 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
2698 </Hsp>
|
jpayne@1
|
2699 <Hsp>
|
jpayne@1
|
2700 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2701 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
2702 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
2703 <Hsp_evalue>9.59034e-59</Hsp_evalue>
|
jpayne@1
|
2704 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
2705 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
2706 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2707 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2708 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2709 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2710 <Hsp_identity>210</Hsp_identity>
|
jpayne@1
|
2711 <Hsp_positive>210</Hsp_positive>
|
jpayne@1
|
2712 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
2713 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
2714 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2715 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2716 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2717 </Hsp>
|
jpayne@1
|
2718 </Hit_hsps>
|
jpayne@1
|
2719 </Hit>
|
jpayne@1
|
2720 </Iteration_hits>
|
jpayne@1
|
2721 <Iteration_stat>
|
jpayne@1
|
2722 <Statistics>
|
jpayne@1
|
2723 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2724 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2725 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2726 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
2727 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2728 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2729 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2730 </Statistics>
|
jpayne@1
|
2731 </Iteration_stat>
|
jpayne@1
|
2732 </Iteration>
|
jpayne@1
|
2733 <Iteration>
|
jpayne@1
|
2734 <Iteration_iter-num>80</Iteration_iter-num>
|
jpayne@1
|
2735 <Iteration_query-ID>Query_80</Iteration_query-ID>
|
jpayne@1
|
2736 <Iteration_query-def>fliC_d_Salmonella.enterica_Typhi_AY353374_b,d,j__1521</Iteration_query-def>
|
jpayne@1
|
2737 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
2738 <Iteration_hits>
|
jpayne@1
|
2739 <Hit>
|
jpayne@1
|
2740 <Hit_num>1</Hit_num>
|
jpayne@1
|
2741 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2742 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2743 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2744 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2745 <Hit_hsps>
|
jpayne@1
|
2746 <Hsp>
|
jpayne@1
|
2747 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2748 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
2749 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
2750 <Hsp_evalue>1.11568e-132</Hsp_evalue>
|
jpayne@1
|
2751 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2752 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
2753 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2754 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
2755 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2756 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2757 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
2758 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
2759 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2760 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
2761 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
2762 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
2763 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
2764 </Hsp>
|
jpayne@1
|
2765 <Hsp>
|
jpayne@1
|
2766 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2767 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
2768 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
2769 <Hsp_evalue>9.52273e-64</Hsp_evalue>
|
jpayne@1
|
2770 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
2771 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
2772 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2773 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2774 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2775 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2776 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
2777 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
2778 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
2779 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
2780 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2781 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2782 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2783 </Hsp>
|
jpayne@1
|
2784 </Hit_hsps>
|
jpayne@1
|
2785 </Hit>
|
jpayne@1
|
2786 </Iteration_hits>
|
jpayne@1
|
2787 <Iteration_stat>
|
jpayne@1
|
2788 <Statistics>
|
jpayne@1
|
2789 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2790 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2791 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2792 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
2793 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2794 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2795 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2796 </Statistics>
|
jpayne@1
|
2797 </Iteration_stat>
|
jpayne@1
|
2798 </Iteration>
|
jpayne@1
|
2799 <Iteration>
|
jpayne@1
|
2800 <Iteration_iter-num>81</Iteration_iter-num>
|
jpayne@1
|
2801 <Iteration_query-ID>Query_81</Iteration_query-ID>
|
jpayne@1
|
2802 <Iteration_query-def>fliC_d_Salmonella.enterica_Typhi_AY353375_b,d,j__1521</Iteration_query-def>
|
jpayne@1
|
2803 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
2804 <Iteration_hits>
|
jpayne@1
|
2805 <Hit>
|
jpayne@1
|
2806 <Hit_num>1</Hit_num>
|
jpayne@1
|
2807 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2808 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2809 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2810 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2811 <Hit_hsps>
|
jpayne@1
|
2812 <Hsp>
|
jpayne@1
|
2813 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2814 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
2815 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
2816 <Hsp_evalue>1.11568e-132</Hsp_evalue>
|
jpayne@1
|
2817 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2818 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
2819 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2820 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
2821 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2822 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2823 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
2824 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
2825 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2826 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
2827 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
2828 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
2829 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
2830 </Hsp>
|
jpayne@1
|
2831 <Hsp>
|
jpayne@1
|
2832 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2833 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
2834 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
2835 <Hsp_evalue>9.52273e-64</Hsp_evalue>
|
jpayne@1
|
2836 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
2837 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
2838 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2839 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2840 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2841 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2842 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
2843 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
2844 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
2845 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
2846 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2847 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2848 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2849 </Hsp>
|
jpayne@1
|
2850 </Hit_hsps>
|
jpayne@1
|
2851 </Hit>
|
jpayne@1
|
2852 </Iteration_hits>
|
jpayne@1
|
2853 <Iteration_stat>
|
jpayne@1
|
2854 <Statistics>
|
jpayne@1
|
2855 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2856 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2857 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2858 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
2859 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2860 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2861 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2862 </Statistics>
|
jpayne@1
|
2863 </Iteration_stat>
|
jpayne@1
|
2864 </Iteration>
|
jpayne@1
|
2865 <Iteration>
|
jpayne@1
|
2866 <Iteration_iter-num>82</Iteration_iter-num>
|
jpayne@1
|
2867 <Iteration_query-ID>Query_82</Iteration_query-ID>
|
jpayne@1
|
2868 <Iteration_query-def>fliC_d_Salmonella.enterica_Isangi_AY353376_b,d,j__1521</Iteration_query-def>
|
jpayne@1
|
2869 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
2870 <Iteration_hits>
|
jpayne@1
|
2871 <Hit>
|
jpayne@1
|
2872 <Hit_num>1</Hit_num>
|
jpayne@1
|
2873 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2874 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2875 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2876 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2877 <Hit_hsps>
|
jpayne@1
|
2878 <Hsp>
|
jpayne@1
|
2879 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2880 <Hsp_bit-score>510.796</Hsp_bit-score>
|
jpayne@1
|
2881 <Hsp_score>276</Hsp_score>
|
jpayne@1
|
2882 <Hsp_evalue>1.41292e-146</Hsp_evalue>
|
jpayne@1
|
2883 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2884 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
2885 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2886 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
2887 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2888 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2889 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
2890 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
2891 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2892 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
2893 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
2894 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
2895 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
2896 </Hsp>
|
jpayne@1
|
2897 <Hsp>
|
jpayne@1
|
2898 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2899 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
2900 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
2901 <Hsp_evalue>4.46195e-57</Hsp_evalue>
|
jpayne@1
|
2902 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
2903 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
2904 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
2905 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2906 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2907 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2908 <Hsp_identity>209</Hsp_identity>
|
jpayne@1
|
2909 <Hsp_positive>209</Hsp_positive>
|
jpayne@1
|
2910 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
2911 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
2912 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTTGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2913 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2914 <Hsp_midline>||||||| |||| ||| | | || || || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2915 </Hsp>
|
jpayne@1
|
2916 </Hit_hsps>
|
jpayne@1
|
2917 </Hit>
|
jpayne@1
|
2918 </Iteration_hits>
|
jpayne@1
|
2919 <Iteration_stat>
|
jpayne@1
|
2920 <Statistics>
|
jpayne@1
|
2921 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2922 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2923 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2924 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
2925 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2926 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2927 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2928 </Statistics>
|
jpayne@1
|
2929 </Iteration_stat>
|
jpayne@1
|
2930 </Iteration>
|
jpayne@1
|
2931 <Iteration>
|
jpayne@1
|
2932 <Iteration_iter-num>83</Iteration_iter-num>
|
jpayne@1
|
2933 <Iteration_query-ID>Query_83</Iteration_query-ID>
|
jpayne@1
|
2934 <Iteration_query-def>fliC_e,h_Salmonella.enterica_Saintpaul_AY353377_e__1509</Iteration_query-def>
|
jpayne@1
|
2935 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
2936 <Iteration_hits>
|
jpayne@1
|
2937 <Hit>
|
jpayne@1
|
2938 <Hit_num>1</Hit_num>
|
jpayne@1
|
2939 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
2940 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
2941 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
2942 <Hit_len>1962</Hit_len>
|
jpayne@1
|
2943 <Hit_hsps>
|
jpayne@1
|
2944 <Hsp>
|
jpayne@1
|
2945 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
2946 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
2947 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
2948 <Hsp_evalue>6.56749e-140</Hsp_evalue>
|
jpayne@1
|
2949 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
2950 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
2951 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
2952 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
2953 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2954 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2955 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
2956 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
2957 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
2958 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
2959 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
2960 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
2961 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
2962 </Hsp>
|
jpayne@1
|
2963 <Hsp>
|
jpayne@1
|
2964 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
2965 <Hsp_bit-score>206.098</Hsp_bit-score>
|
jpayne@1
|
2966 <Hsp_score>111</Hsp_score>
|
jpayne@1
|
2967 <Hsp_evalue>7.40681e-55</Hsp_evalue>
|
jpayne@1
|
2968 <Hsp_query-from>1240</Hsp_query-from>
|
jpayne@1
|
2969 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
2970 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
2971 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
2972 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
2973 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
2974 <Hsp_identity>219</Hsp_identity>
|
jpayne@1
|
2975 <Hsp_positive>219</Hsp_positive>
|
jpayne@1
|
2976 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
2977 <Hsp_align-len>272</Hsp_align-len>
|
jpayne@1
|
2978 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAGGTTGATGC-GTTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACTTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
2979 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
2980 <Hsp_midline>||||| |||||| ||||||| | || || | | || || || ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| || || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
2981 </Hsp>
|
jpayne@1
|
2982 </Hit_hsps>
|
jpayne@1
|
2983 </Hit>
|
jpayne@1
|
2984 </Iteration_hits>
|
jpayne@1
|
2985 <Iteration_stat>
|
jpayne@1
|
2986 <Statistics>
|
jpayne@1
|
2987 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
2988 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
2989 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
2990 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
2991 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
2992 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
2993 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
2994 </Statistics>
|
jpayne@1
|
2995 </Iteration_stat>
|
jpayne@1
|
2996 </Iteration>
|
jpayne@1
|
2997 <Iteration>
|
jpayne@1
|
2998 <Iteration_iter-num>84</Iteration_iter-num>
|
jpayne@1
|
2999 <Iteration_query-ID>Query_84</Iteration_query-ID>
|
jpayne@1
|
3000 <Iteration_query-def>fliC_e,h_Salmonella.enterica_Sandiego.var.d+_AY353378_e__1509</Iteration_query-def>
|
jpayne@1
|
3001 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
3002 <Iteration_hits>
|
jpayne@1
|
3003 <Hit>
|
jpayne@1
|
3004 <Hit_num>1</Hit_num>
|
jpayne@1
|
3005 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3006 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3007 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3008 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3009 <Hit_hsps>
|
jpayne@1
|
3010 <Hsp>
|
jpayne@1
|
3011 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3012 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
3013 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
3014 <Hsp_evalue>3.05556e-138</Hsp_evalue>
|
jpayne@1
|
3015 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3016 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
3017 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3018 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
3019 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3020 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3021 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
3022 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
3023 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
3024 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
3025 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
3026 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
3027 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
3028 </Hsp>
|
jpayne@1
|
3029 <Hsp>
|
jpayne@1
|
3030 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
3031 <Hsp_bit-score>206.098</Hsp_bit-score>
|
jpayne@1
|
3032 <Hsp_score>111</Hsp_score>
|
jpayne@1
|
3033 <Hsp_evalue>7.40681e-55</Hsp_evalue>
|
jpayne@1
|
3034 <Hsp_query-from>1312</Hsp_query-from>
|
jpayne@1
|
3035 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
3036 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
3037 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3038 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3039 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3040 <Hsp_identity>170</Hsp_identity>
|
jpayne@1
|
3041 <Hsp_positive>170</Hsp_positive>
|
jpayne@1
|
3042 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
3043 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
3044 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3045 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3046 <Hsp_midline>|||||||| | || || || |||||||| ||||| || |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3047 </Hsp>
|
jpayne@1
|
3048 </Hit_hsps>
|
jpayne@1
|
3049 </Hit>
|
jpayne@1
|
3050 </Iteration_hits>
|
jpayne@1
|
3051 <Iteration_stat>
|
jpayne@1
|
3052 <Statistics>
|
jpayne@1
|
3053 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3054 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3055 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3056 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
3057 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3058 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3059 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3060 </Statistics>
|
jpayne@1
|
3061 </Iteration_stat>
|
jpayne@1
|
3062 </Iteration>
|
jpayne@1
|
3063 <Iteration>
|
jpayne@1
|
3064 <Iteration_iter-num>85</Iteration_iter-num>
|
jpayne@1
|
3065 <Iteration_query-ID>Query_85</Iteration_query-ID>
|
jpayne@1
|
3066 <Iteration_query-def>fliC_e,h_Salmonella.enterica_Newport_AY353379_e__1509</Iteration_query-def>
|
jpayne@1
|
3067 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
3068 <Iteration_hits>
|
jpayne@1
|
3069 <Hit>
|
jpayne@1
|
3070 <Hit_num>1</Hit_num>
|
jpayne@1
|
3071 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3072 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3073 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3074 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3075 <Hit_hsps>
|
jpayne@1
|
3076 <Hsp>
|
jpayne@1
|
3077 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3078 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
3079 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
3080 <Hsp_evalue>3.05556e-138</Hsp_evalue>
|
jpayne@1
|
3081 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3082 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
3083 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3084 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
3085 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3086 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3087 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
3088 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
3089 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
3090 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
3091 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
3092 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
3093 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
3094 </Hsp>
|
jpayne@1
|
3095 <Hsp>
|
jpayne@1
|
3096 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
3097 <Hsp_bit-score>195.019</Hsp_bit-score>
|
jpayne@1
|
3098 <Hsp_score>105</Hsp_score>
|
jpayne@1
|
3099 <Hsp_evalue>1.60329e-51</Hsp_evalue>
|
jpayne@1
|
3100 <Hsp_query-from>1240</Hsp_query-from>
|
jpayne@1
|
3101 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
3102 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
3103 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3104 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3105 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3106 <Hsp_identity>217</Hsp_identity>
|
jpayne@1
|
3107 <Hsp_positive>217</Hsp_positive>
|
jpayne@1
|
3108 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
3109 <Hsp_align-len>272</Hsp_align-len>
|
jpayne@1
|
3110 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAGGTTGATGC-GTTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACTTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATCCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3111 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3112 <Hsp_midline>||||| |||||| ||||||| | || || | | || || || ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| || || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||| ||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3113 </Hsp>
|
jpayne@1
|
3114 </Hit_hsps>
|
jpayne@1
|
3115 </Hit>
|
jpayne@1
|
3116 </Iteration_hits>
|
jpayne@1
|
3117 <Iteration_stat>
|
jpayne@1
|
3118 <Statistics>
|
jpayne@1
|
3119 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3120 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3121 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3122 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
3123 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3124 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3125 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3126 </Statistics>
|
jpayne@1
|
3127 </Iteration_stat>
|
jpayne@1
|
3128 </Iteration>
|
jpayne@1
|
3129 <Iteration>
|
jpayne@1
|
3130 <Iteration_iter-num>86</Iteration_iter-num>
|
jpayne@1
|
3131 <Iteration_query-ID>Query_86</Iteration_query-ID>
|
jpayne@1
|
3132 <Iteration_query-def>fliC_f,g_Salmonella.enterica_Derby_AY353380_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3133 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3134 <Iteration_hits>
|
jpayne@1
|
3135 <Hit>
|
jpayne@1
|
3136 <Hit_num>1</Hit_num>
|
jpayne@1
|
3137 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3138 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3139 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3140 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3141 <Hit_hsps>
|
jpayne@1
|
3142 <Hsp>
|
jpayne@1
|
3143 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3144 <Hsp_bit-score>2577.2</Hsp_bit-score>
|
jpayne@1
|
3145 <Hsp_score>1395</Hsp_score>
|
jpayne@1
|
3146 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3147 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3148 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3149 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3150 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3151 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3152 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3153 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
3154 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
3155 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3156 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3157 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGTTTCACGTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAGGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAGTCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGAATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGACCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGGTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAAGGCGAAAGTAAAATTACAGTAAACGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGGTCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3158 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3159 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3160 </Hsp>
|
jpayne@1
|
3161 </Hit_hsps>
|
jpayne@1
|
3162 </Hit>
|
jpayne@1
|
3163 </Iteration_hits>
|
jpayne@1
|
3164 <Iteration_stat>
|
jpayne@1
|
3165 <Statistics>
|
jpayne@1
|
3166 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3167 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3168 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3169 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3170 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3171 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3172 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3173 </Statistics>
|
jpayne@1
|
3174 </Iteration_stat>
|
jpayne@1
|
3175 </Iteration>
|
jpayne@1
|
3176 <Iteration>
|
jpayne@1
|
3177 <Iteration_iter-num>87</Iteration_iter-num>
|
jpayne@1
|
3178 <Iteration_query-ID>Query_87</Iteration_query-ID>
|
jpayne@1
|
3179 <Iteration_query-def>fliC_f,g_Salmonella.enterica_Derby_AY353381_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3180 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3181 <Iteration_hits>
|
jpayne@1
|
3182 <Hit>
|
jpayne@1
|
3183 <Hit_num>1</Hit_num>
|
jpayne@1
|
3184 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3185 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3186 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3187 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3188 <Hit_hsps>
|
jpayne@1
|
3189 <Hsp>
|
jpayne@1
|
3190 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3191 <Hsp_bit-score>2577.2</Hsp_bit-score>
|
jpayne@1
|
3192 <Hsp_score>1395</Hsp_score>
|
jpayne@1
|
3193 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3194 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3195 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3196 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3197 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3198 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3199 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3200 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
3201 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
3202 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3203 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3204 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAGGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCTACAGTGGGTGATCTGAAGTCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGAATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGACCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGGTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAAGGCGAAAGTAAAATTACAGTAAACGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGGTCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3205 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3206 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3207 </Hsp>
|
jpayne@1
|
3208 </Hit_hsps>
|
jpayne@1
|
3209 </Hit>
|
jpayne@1
|
3210 </Iteration_hits>
|
jpayne@1
|
3211 <Iteration_stat>
|
jpayne@1
|
3212 <Statistics>
|
jpayne@1
|
3213 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3214 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3215 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3216 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3217 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3218 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3219 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3220 </Statistics>
|
jpayne@1
|
3221 </Iteration_stat>
|
jpayne@1
|
3222 </Iteration>
|
jpayne@1
|
3223 <Iteration>
|
jpayne@1
|
3224 <Iteration_iter-num>88</Iteration_iter-num>
|
jpayne@1
|
3225 <Iteration_query-ID>Query_88</Iteration_query-ID>
|
jpayne@1
|
3226 <Iteration_query-def>fliC_f,g,m,t_Salmonella.enterica_II.6,8:f,g,m,t:.e,n,x_AY353382_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3227 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3228 <Iteration_hits>
|
jpayne@1
|
3229 <Hit>
|
jpayne@1
|
3230 <Hit_num>1</Hit_num>
|
jpayne@1
|
3231 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3232 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3233 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3234 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3235 <Hit_hsps>
|
jpayne@1
|
3236 <Hsp>
|
jpayne@1
|
3237 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3238 <Hsp_bit-score>2388.84</Hsp_bit-score>
|
jpayne@1
|
3239 <Hsp_score>1293</Hsp_score>
|
jpayne@1
|
3240 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3241 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3242 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3243 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3244 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3245 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3246 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3247 <Hsp_identity>1444</Hsp_identity>
|
jpayne@1
|
3248 <Hsp_positive>1444</Hsp_positive>
|
jpayne@1
|
3249 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
3250 <Hsp_align-len>1519</Hsp_align-len>
|
jpayne@1
|
3251 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCTCAGTCCTCACTGAGTTCCGCTATCGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGATGGTATCTCCATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTACGTGAGTTGTCTGTTCAGGCAACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAGTTCAACGGCGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATTCAGGTTGGTGCTAACGATGGTGAATCTATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGATTCAATGTTAACGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTGACGGGGTACGATACCTATGCAGCTGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGCAGCAGCCCCGGATAAAGTATATGTAAATGCTGCAAACGGTCAGTTGACAACTGATGATGCGCAAAATAACACTGCAGTTGCTCTATTCAATACCACTAAATCTACTGCTGGTACCGATGACGCCAAAGCGATAGCTAATGTCATTAAGGGTGGTAAAGAGGGAGATACCTTTGATTATAAAGGCGTATCTTTTACTATTGATACAAAAACTGGTAATGATGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGGTGGTGCGGCGAATGTTAATGATGCTACCTTACAATCAAGCAGAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAATGAGAGTGCGAAACTTTCTGATTTGGAAGCAAATAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCTAAGAAAAGTACCGCTAATCCACTGGCTGCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCGCTGGGGGCAATTCAGAACCGCTTTGATTCTGCCATTACCAACCTTGGTAATACGGTAAATAA-CTTATCTTCTGCCCGTAGTCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3252 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCC-GCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3253 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || || || |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | || |||||||| ||| |||||||| || |||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||| ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||| || || | || | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3254 </Hsp>
|
jpayne@1
|
3255 </Hit_hsps>
|
jpayne@1
|
3256 </Hit>
|
jpayne@1
|
3257 </Iteration_hits>
|
jpayne@1
|
3258 <Iteration_stat>
|
jpayne@1
|
3259 <Statistics>
|
jpayne@1
|
3260 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3261 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3262 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3263 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3264 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3265 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3266 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3267 </Statistics>
|
jpayne@1
|
3268 </Iteration_stat>
|
jpayne@1
|
3269 </Iteration>
|
jpayne@1
|
3270 <Iteration>
|
jpayne@1
|
3271 <Iteration_iter-num>89</Iteration_iter-num>
|
jpayne@1
|
3272 <Iteration_query-ID>Query_89</Iteration_query-ID>
|
jpayne@1
|
3273 <Iteration_query-def>fliC_f,g,s_Salmonella.enterica_Agona_AY353383_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3274 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3275 <Iteration_hits>
|
jpayne@1
|
3276 <Hit>
|
jpayne@1
|
3277 <Hit_num>1</Hit_num>
|
jpayne@1
|
3278 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3279 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3280 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3281 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3282 <Hit_hsps>
|
jpayne@1
|
3283 <Hsp>
|
jpayne@1
|
3284 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3285 <Hsp_bit-score>2682.46</Hsp_bit-score>
|
jpayne@1
|
3286 <Hsp_score>1452</Hsp_score>
|
jpayne@1
|
3287 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3288 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3289 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3290 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3291 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3292 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3293 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3294 <Hsp_identity>1496</Hsp_identity>
|
jpayne@1
|
3295 <Hsp_positive>1496</Hsp_positive>
|
jpayne@1
|
3296 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3297 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3298 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGGTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAAGGCGAAAGTAAAATTACAGTAAACGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGGTCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3299 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3300 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3301 </Hsp>
|
jpayne@1
|
3302 </Hit_hsps>
|
jpayne@1
|
3303 </Hit>
|
jpayne@1
|
3304 </Iteration_hits>
|
jpayne@1
|
3305 <Iteration_stat>
|
jpayne@1
|
3306 <Statistics>
|
jpayne@1
|
3307 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3308 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3309 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3310 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3311 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3312 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3313 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3314 </Statistics>
|
jpayne@1
|
3315 </Iteration_stat>
|
jpayne@1
|
3316 </Iteration>
|
jpayne@1
|
3317 <Iteration>
|
jpayne@1
|
3318 <Iteration_iter-num>90</Iteration_iter-num>
|
jpayne@1
|
3319 <Iteration_query-ID>Query_90</Iteration_query-ID>
|
jpayne@1
|
3320 <Iteration_query-def>fliC_f,g,s_Salmonella.enterica_Agona_AY353384_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3321 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3322 <Iteration_hits>
|
jpayne@1
|
3323 <Hit>
|
jpayne@1
|
3324 <Hit_num>1</Hit_num>
|
jpayne@1
|
3325 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3326 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3327 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3328 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3329 <Hit_hsps>
|
jpayne@1
|
3330 <Hsp>
|
jpayne@1
|
3331 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3332 <Hsp_bit-score>2682.46</Hsp_bit-score>
|
jpayne@1
|
3333 <Hsp_score>1452</Hsp_score>
|
jpayne@1
|
3334 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3335 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3336 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3337 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3338 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3339 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3340 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3341 <Hsp_identity>1496</Hsp_identity>
|
jpayne@1
|
3342 <Hsp_positive>1496</Hsp_positive>
|
jpayne@1
|
3343 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3344 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3345 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGGTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAAGGCGAAAGTAAAATTACAGTAAACGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGGTCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3346 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3347 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3348 </Hsp>
|
jpayne@1
|
3349 </Hit_hsps>
|
jpayne@1
|
3350 </Hit>
|
jpayne@1
|
3351 </Iteration_hits>
|
jpayne@1
|
3352 <Iteration_stat>
|
jpayne@1
|
3353 <Statistics>
|
jpayne@1
|
3354 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3355 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3356 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3357 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3358 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3359 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3360 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3361 </Statistics>
|
jpayne@1
|
3362 </Iteration_stat>
|
jpayne@1
|
3363 </Iteration>
|
jpayne@1
|
3364 <Iteration>
|
jpayne@1
|
3365 <Iteration_iter-num>91</Iteration_iter-num>
|
jpayne@1
|
3366 <Iteration_query-ID>Query_91</Iteration_query-ID>
|
jpayne@1
|
3367 <Iteration_query-def>fliC_f,g,s_Salmonella.enterica_DTU-genomes_unknown_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3368 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3369 <Iteration_hits>
|
jpayne@1
|
3370 <Hit>
|
jpayne@1
|
3371 <Hit_num>1</Hit_num>
|
jpayne@1
|
3372 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3373 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3374 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3375 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3376 <Hit_hsps>
|
jpayne@1
|
3377 <Hsp>
|
jpayne@1
|
3378 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3379 <Hsp_bit-score>2643.68</Hsp_bit-score>
|
jpayne@1
|
3380 <Hsp_score>1431</Hsp_score>
|
jpayne@1
|
3381 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3382 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3383 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3384 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3385 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3386 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3387 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3388 <Hsp_identity>1489</Hsp_identity>
|
jpayne@1
|
3389 <Hsp_positive>1489</Hsp_positive>
|
jpayne@1
|
3390 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3391 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3392 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTGCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGGTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTTTACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAAGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGGTCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3393 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3394 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3395 </Hsp>
|
jpayne@1
|
3396 </Hit_hsps>
|
jpayne@1
|
3397 </Hit>
|
jpayne@1
|
3398 </Iteration_hits>
|
jpayne@1
|
3399 <Iteration_stat>
|
jpayne@1
|
3400 <Statistics>
|
jpayne@1
|
3401 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3402 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3403 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3404 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3405 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3406 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3407 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3408 </Statistics>
|
jpayne@1
|
3409 </Iteration_stat>
|
jpayne@1
|
3410 </Iteration>
|
jpayne@1
|
3411 <Iteration>
|
jpayne@1
|
3412 <Iteration_iter-num>92</Iteration_iter-num>
|
jpayne@1
|
3413 <Iteration_query-ID>Query_92</Iteration_query-ID>
|
jpayne@1
|
3414 <Iteration_query-def>fliC_g,m_Salmonella.enterica_Enteritidis_AY353386_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3415 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3416 <Iteration_hits>
|
jpayne@1
|
3417 <Hit>
|
jpayne@1
|
3418 <Hit_num>1</Hit_num>
|
jpayne@1
|
3419 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3420 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3421 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3422 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3423 <Hit_hsps>
|
jpayne@1
|
3424 <Hsp>
|
jpayne@1
|
3425 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3426 <Hsp_bit-score>2610.44</Hsp_bit-score>
|
jpayne@1
|
3427 <Hsp_score>1413</Hsp_score>
|
jpayne@1
|
3428 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3429 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3430 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3431 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3432 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3433 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3434 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3435 <Hsp_identity>1483</Hsp_identity>
|
jpayne@1
|
3436 <Hsp_positive>1483</Hsp_positive>
|
jpayne@1
|
3437 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3438 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3439 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3440 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3441 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3442 </Hsp>
|
jpayne@1
|
3443 </Hit_hsps>
|
jpayne@1
|
3444 </Hit>
|
jpayne@1
|
3445 </Iteration_hits>
|
jpayne@1
|
3446 <Iteration_stat>
|
jpayne@1
|
3447 <Statistics>
|
jpayne@1
|
3448 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3449 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3450 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3451 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3452 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3453 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3454 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3455 </Statistics>
|
jpayne@1
|
3456 </Iteration_stat>
|
jpayne@1
|
3457 </Iteration>
|
jpayne@1
|
3458 <Iteration>
|
jpayne@1
|
3459 <Iteration_iter-num>93</Iteration_iter-num>
|
jpayne@1
|
3460 <Iteration_query-ID>Query_93</Iteration_query-ID>
|
jpayne@1
|
3461 <Iteration_query-def>fliC_g,m_Salmonella.enterica_Enteritidis_AY353387_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3462 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3463 <Iteration_hits>
|
jpayne@1
|
3464 <Hit>
|
jpayne@1
|
3465 <Hit_num>1</Hit_num>
|
jpayne@1
|
3466 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3467 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3468 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3469 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3470 <Hit_hsps>
|
jpayne@1
|
3471 <Hsp>
|
jpayne@1
|
3472 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3473 <Hsp_bit-score>2610.44</Hsp_bit-score>
|
jpayne@1
|
3474 <Hsp_score>1413</Hsp_score>
|
jpayne@1
|
3475 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3476 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3477 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3478 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3479 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3480 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3481 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3482 <Hsp_identity>1483</Hsp_identity>
|
jpayne@1
|
3483 <Hsp_positive>1483</Hsp_positive>
|
jpayne@1
|
3484 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3485 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3486 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3487 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3488 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3489 </Hsp>
|
jpayne@1
|
3490 </Hit_hsps>
|
jpayne@1
|
3491 </Hit>
|
jpayne@1
|
3492 </Iteration_hits>
|
jpayne@1
|
3493 <Iteration_stat>
|
jpayne@1
|
3494 <Statistics>
|
jpayne@1
|
3495 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3496 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3497 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3498 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3499 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3500 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3501 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3502 </Statistics>
|
jpayne@1
|
3503 </Iteration_stat>
|
jpayne@1
|
3504 </Iteration>
|
jpayne@1
|
3505 <Iteration>
|
jpayne@1
|
3506 <Iteration_iter-num>94</Iteration_iter-num>
|
jpayne@1
|
3507 <Iteration_query-ID>Query_94</Iteration_query-ID>
|
jpayne@1
|
3508 <Iteration_query-def>fliC_g,m_Salmonella.enterica_Enteritidis_AY353388_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3509 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3510 <Iteration_hits>
|
jpayne@1
|
3511 <Hit>
|
jpayne@1
|
3512 <Hit_num>1</Hit_num>
|
jpayne@1
|
3513 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3514 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3515 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3516 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3517 <Hit_hsps>
|
jpayne@1
|
3518 <Hsp>
|
jpayne@1
|
3519 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3520 <Hsp_bit-score>2610.44</Hsp_bit-score>
|
jpayne@1
|
3521 <Hsp_score>1413</Hsp_score>
|
jpayne@1
|
3522 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3523 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3524 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3525 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3526 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3527 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3528 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3529 <Hsp_identity>1483</Hsp_identity>
|
jpayne@1
|
3530 <Hsp_positive>1483</Hsp_positive>
|
jpayne@1
|
3531 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3532 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3533 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3534 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3535 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3536 </Hsp>
|
jpayne@1
|
3537 </Hit_hsps>
|
jpayne@1
|
3538 </Hit>
|
jpayne@1
|
3539 </Iteration_hits>
|
jpayne@1
|
3540 <Iteration_stat>
|
jpayne@1
|
3541 <Statistics>
|
jpayne@1
|
3542 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3543 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3544 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3545 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3546 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3547 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3548 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3549 </Statistics>
|
jpayne@1
|
3550 </Iteration_stat>
|
jpayne@1
|
3551 </Iteration>
|
jpayne@1
|
3552 <Iteration>
|
jpayne@1
|
3553 <Iteration_iter-num>95</Iteration_iter-num>
|
jpayne@1
|
3554 <Iteration_query-ID>Query_95</Iteration_query-ID>
|
jpayne@1
|
3555 <Iteration_query-def>fliC_g,m_Salmonella.enterica_Enteritidis_AY353389_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3556 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3557 <Iteration_hits>
|
jpayne@1
|
3558 <Hit>
|
jpayne@1
|
3559 <Hit_num>1</Hit_num>
|
jpayne@1
|
3560 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3561 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3562 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3563 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3564 <Hit_hsps>
|
jpayne@1
|
3565 <Hsp>
|
jpayne@1
|
3566 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3567 <Hsp_bit-score>2610.44</Hsp_bit-score>
|
jpayne@1
|
3568 <Hsp_score>1413</Hsp_score>
|
jpayne@1
|
3569 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3570 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3571 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3572 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3573 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3574 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3575 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3576 <Hsp_identity>1483</Hsp_identity>
|
jpayne@1
|
3577 <Hsp_positive>1483</Hsp_positive>
|
jpayne@1
|
3578 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3579 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3580 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3581 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3582 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3583 </Hsp>
|
jpayne@1
|
3584 </Hit_hsps>
|
jpayne@1
|
3585 </Hit>
|
jpayne@1
|
3586 </Iteration_hits>
|
jpayne@1
|
3587 <Iteration_stat>
|
jpayne@1
|
3588 <Statistics>
|
jpayne@1
|
3589 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3590 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3591 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3592 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3593 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3594 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3595 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3596 </Statistics>
|
jpayne@1
|
3597 </Iteration_stat>
|
jpayne@1
|
3598 </Iteration>
|
jpayne@1
|
3599 <Iteration>
|
jpayne@1
|
3600 <Iteration_iter-num>96</Iteration_iter-num>
|
jpayne@1
|
3601 <Iteration_query-ID>Query_96</Iteration_query-ID>
|
jpayne@1
|
3602 <Iteration_query-def>fliC_g,m,s_Salmonella.enterica_Montevideo_AY353391_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3603 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3604 <Iteration_hits>
|
jpayne@1
|
3605 <Hit>
|
jpayne@1
|
3606 <Hit_num>1</Hit_num>
|
jpayne@1
|
3607 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3608 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3609 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3610 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3611 <Hit_hsps>
|
jpayne@1
|
3612 <Hsp>
|
jpayne@1
|
3613 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3614 <Hsp_bit-score>2643.68</Hsp_bit-score>
|
jpayne@1
|
3615 <Hsp_score>1431</Hsp_score>
|
jpayne@1
|
3616 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3617 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3618 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3619 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3620 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3621 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3622 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3623 <Hsp_identity>1489</Hsp_identity>
|
jpayne@1
|
3624 <Hsp_positive>1489</Hsp_positive>
|
jpayne@1
|
3625 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3626 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3627 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3628 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3629 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3630 </Hsp>
|
jpayne@1
|
3631 </Hit_hsps>
|
jpayne@1
|
3632 </Hit>
|
jpayne@1
|
3633 </Iteration_hits>
|
jpayne@1
|
3634 <Iteration_stat>
|
jpayne@1
|
3635 <Statistics>
|
jpayne@1
|
3636 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3637 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3638 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3639 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3640 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3641 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3642 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3643 </Statistics>
|
jpayne@1
|
3644 </Iteration_stat>
|
jpayne@1
|
3645 </Iteration>
|
jpayne@1
|
3646 <Iteration>
|
jpayne@1
|
3647 <Iteration_iter-num>97</Iteration_iter-num>
|
jpayne@1
|
3648 <Iteration_query-ID>Query_97</Iteration_query-ID>
|
jpayne@1
|
3649 <Iteration_query-def>fliC_g,m,s_Salmonella.enterica_Montevideo_AY353392_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3650 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3651 <Iteration_hits>
|
jpayne@1
|
3652 <Hit>
|
jpayne@1
|
3653 <Hit_num>1</Hit_num>
|
jpayne@1
|
3654 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3655 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3656 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3657 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3658 <Hit_hsps>
|
jpayne@1
|
3659 <Hsp>
|
jpayne@1
|
3660 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3661 <Hsp_bit-score>2638.14</Hsp_bit-score>
|
jpayne@1
|
3662 <Hsp_score>1428</Hsp_score>
|
jpayne@1
|
3663 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3664 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3665 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3666 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3667 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3668 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3669 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3670 <Hsp_identity>1488</Hsp_identity>
|
jpayne@1
|
3671 <Hsp_positive>1488</Hsp_positive>
|
jpayne@1
|
3672 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3673 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3674 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCATTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3675 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3676 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3677 </Hsp>
|
jpayne@1
|
3678 </Hit_hsps>
|
jpayne@1
|
3679 </Hit>
|
jpayne@1
|
3680 </Iteration_hits>
|
jpayne@1
|
3681 <Iteration_stat>
|
jpayne@1
|
3682 <Statistics>
|
jpayne@1
|
3683 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3684 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3685 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3686 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3687 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3688 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3689 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3690 </Statistics>
|
jpayne@1
|
3691 </Iteration_stat>
|
jpayne@1
|
3692 </Iteration>
|
jpayne@1
|
3693 <Iteration>
|
jpayne@1
|
3694 <Iteration_iter-num>98</Iteration_iter-num>
|
jpayne@1
|
3695 <Iteration_query-ID>Query_98</Iteration_query-ID>
|
jpayne@1
|
3696 <Iteration_query-def>fliC_g,m,q_Salmonella.enterica_Blegdam_AY353393_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3697 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3698 <Iteration_hits>
|
jpayne@1
|
3699 <Hit>
|
jpayne@1
|
3700 <Hit_num>1</Hit_num>
|
jpayne@1
|
3701 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3702 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3703 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3704 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3705 <Hit_hsps>
|
jpayne@1
|
3706 <Hsp>
|
jpayne@1
|
3707 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3708 <Hsp_bit-score>2604.9</Hsp_bit-score>
|
jpayne@1
|
3709 <Hsp_score>1410</Hsp_score>
|
jpayne@1
|
3710 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3711 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3712 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3713 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3714 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3715 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3716 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3717 <Hsp_identity>1482</Hsp_identity>
|
jpayne@1
|
3718 <Hsp_positive>1482</Hsp_positive>
|
jpayne@1
|
3719 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3720 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3721 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGGCGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3722 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3723 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3724 </Hsp>
|
jpayne@1
|
3725 </Hit_hsps>
|
jpayne@1
|
3726 </Hit>
|
jpayne@1
|
3727 </Iteration_hits>
|
jpayne@1
|
3728 <Iteration_stat>
|
jpayne@1
|
3729 <Statistics>
|
jpayne@1
|
3730 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3731 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3732 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3733 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3734 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3735 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3736 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3737 </Statistics>
|
jpayne@1
|
3738 </Iteration_stat>
|
jpayne@1
|
3739 </Iteration>
|
jpayne@1
|
3740 <Iteration>
|
jpayne@1
|
3741 <Iteration_iter-num>99</Iteration_iter-num>
|
jpayne@1
|
3742 <Iteration_query-ID>Query_99</Iteration_query-ID>
|
jpayne@1
|
3743 <Iteration_query-def>fliC_g,m,s_Salmonella.enterica_Amsterdam.var.O15+_AY353394_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3744 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3745 <Iteration_hits>
|
jpayne@1
|
3746 <Hit>
|
jpayne@1
|
3747 <Hit_num>1</Hit_num>
|
jpayne@1
|
3748 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3749 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3750 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3751 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3752 <Hit_hsps>
|
jpayne@1
|
3753 <Hsp>
|
jpayne@1
|
3754 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3755 <Hsp_bit-score>2660.3</Hsp_bit-score>
|
jpayne@1
|
3756 <Hsp_score>1440</Hsp_score>
|
jpayne@1
|
3757 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3758 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3759 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3760 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3761 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3762 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3763 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3764 <Hsp_identity>1492</Hsp_identity>
|
jpayne@1
|
3765 <Hsp_positive>1492</Hsp_positive>
|
jpayne@1
|
3766 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3767 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3768 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTGCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3769 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3770 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3771 </Hsp>
|
jpayne@1
|
3772 </Hit_hsps>
|
jpayne@1
|
3773 </Hit>
|
jpayne@1
|
3774 </Iteration_hits>
|
jpayne@1
|
3775 <Iteration_stat>
|
jpayne@1
|
3776 <Statistics>
|
jpayne@1
|
3777 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3778 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3779 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3780 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3781 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3782 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3783 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3784 </Statistics>
|
jpayne@1
|
3785 </Iteration_stat>
|
jpayne@1
|
3786 </Iteration>
|
jpayne@1
|
3787 <Iteration>
|
jpayne@1
|
3788 <Iteration_iter-num>100</Iteration_iter-num>
|
jpayne@1
|
3789 <Iteration_query-ID>Query_100</Iteration_query-ID>
|
jpayne@1
|
3790 <Iteration_query-def>fliC_g,m,s_Salmonella.enterica_Amsterdam_AY353395_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3791 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3792 <Iteration_hits>
|
jpayne@1
|
3793 <Hit>
|
jpayne@1
|
3794 <Hit_num>1</Hit_num>
|
jpayne@1
|
3795 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3796 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3797 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3798 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3799 <Hit_hsps>
|
jpayne@1
|
3800 <Hsp>
|
jpayne@1
|
3801 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3802 <Hsp_bit-score>2654.76</Hsp_bit-score>
|
jpayne@1
|
3803 <Hsp_score>1437</Hsp_score>
|
jpayne@1
|
3804 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3805 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3806 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3807 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3808 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3809 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3810 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3811 <Hsp_identity>1491</Hsp_identity>
|
jpayne@1
|
3812 <Hsp_positive>1491</Hsp_positive>
|
jpayne@1
|
3813 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3814 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3815 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTGCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3816 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3817 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3818 </Hsp>
|
jpayne@1
|
3819 </Hit_hsps>
|
jpayne@1
|
3820 </Hit>
|
jpayne@1
|
3821 </Iteration_hits>
|
jpayne@1
|
3822 <Iteration_stat>
|
jpayne@1
|
3823 <Statistics>
|
jpayne@1
|
3824 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3825 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3826 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3827 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3828 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3829 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3830 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3831 </Statistics>
|
jpayne@1
|
3832 </Iteration_stat>
|
jpayne@1
|
3833 </Iteration>
|
jpayne@1
|
3834 <Iteration>
|
jpayne@1
|
3835 <Iteration_iter-num>101</Iteration_iter-num>
|
jpayne@1
|
3836 <Iteration_query-ID>Query_101</Iteration_query-ID>
|
jpayne@1
|
3837 <Iteration_query-def>fliC_g,m,s,t_Salmonella.enterica_II.50:.g,m,s,t:1,5_AY353396_g,m__1515</Iteration_query-def>
|
jpayne@1
|
3838 <Iteration_query-len>1515</Iteration_query-len>
|
jpayne@1
|
3839 <Iteration_hits>
|
jpayne@1
|
3840 <Hit>
|
jpayne@1
|
3841 <Hit_num>1</Hit_num>
|
jpayne@1
|
3842 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3843 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3844 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3845 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3846 <Hit_hsps>
|
jpayne@1
|
3847 <Hsp>
|
jpayne@1
|
3848 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3849 <Hsp_bit-score>2501.48</Hsp_bit-score>
|
jpayne@1
|
3850 <Hsp_score>1354</Hsp_score>
|
jpayne@1
|
3851 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3852 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3853 <Hsp_query-to>1515</Hsp_query-to>
|
jpayne@1
|
3854 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3855 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3856 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3857 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3858 <Hsp_identity>1464</Hsp_identity>
|
jpayne@1
|
3859 <Hsp_positive>1464</Hsp_positive>
|
jpayne@1
|
3860 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
3861 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3862 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCTCAGTCCTCACTGAGTTCCGCTATCGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAGTTCAACGGCGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGATTCAATGTTAACGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGGTACGATACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGATGATGCGCAAAATAACACTGCAGTTGATCTATTCAAGACCACTAAATCTGCTGCTGGTACCGATGACGCCAAAGCGATAGCTAATGTCATTAAGGGTGGTAAAGAGGGAGATACCTTTGATTATAAAGGCGTATCTTTTACTATTGATACAAAAACTGGTAATGATGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCGGTGGTG--GT-AGTGTTAATGATGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAATGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAATCCACTGGCTGCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACCTCTGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3863 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3864 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | || |||||||| ||| | ||||||||||| ||||||||| |||||||||||||||| ||||| |||||||||| || ||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3865 </Hsp>
|
jpayne@1
|
3866 </Hit_hsps>
|
jpayne@1
|
3867 </Hit>
|
jpayne@1
|
3868 </Iteration_hits>
|
jpayne@1
|
3869 <Iteration_stat>
|
jpayne@1
|
3870 <Statistics>
|
jpayne@1
|
3871 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3872 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3873 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3874 <Statistics_eff-space>81879912</Statistics_eff-space>
|
jpayne@1
|
3875 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3876 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3877 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3878 </Statistics>
|
jpayne@1
|
3879 </Iteration_stat>
|
jpayne@1
|
3880 </Iteration>
|
jpayne@1
|
3881 <Iteration>
|
jpayne@1
|
3882 <Iteration_iter-num>102</Iteration_iter-num>
|
jpayne@1
|
3883 <Iteration_query-ID>Query_102</Iteration_query-ID>
|
jpayne@1
|
3884 <Iteration_query-def>fliC_g,m,s,t_Salmonella.enterica_II.43:g,m,s,t:z42_AY353397_g,m__1515</Iteration_query-def>
|
jpayne@1
|
3885 <Iteration_query-len>1515</Iteration_query-len>
|
jpayne@1
|
3886 <Iteration_hits>
|
jpayne@1
|
3887 <Hit>
|
jpayne@1
|
3888 <Hit_num>1</Hit_num>
|
jpayne@1
|
3889 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3890 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3891 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3892 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3893 <Hit_hsps>
|
jpayne@1
|
3894 <Hsp>
|
jpayne@1
|
3895 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3896 <Hsp_bit-score>2468.24</Hsp_bit-score>
|
jpayne@1
|
3897 <Hsp_score>1336</Hsp_score>
|
jpayne@1
|
3898 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3899 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3900 <Hsp_query-to>1515</Hsp_query-to>
|
jpayne@1
|
3901 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3902 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3903 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3904 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3905 <Hsp_identity>1458</Hsp_identity>
|
jpayne@1
|
3906 <Hsp_positive>1458</Hsp_positive>
|
jpayne@1
|
3907 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
3908 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3909 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCTCAGTCCTCACTGAGTTCCGCTATCGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAGTTCAACGGCGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGATTCAATGTTAACGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGGTACGATACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCTGCAAACGGTCAGTTGACAACTGATGATGCGCAAAATAACACTGCAGTTGATCTATTCAAGACCACTAAATCTACTGCTGGTACCGATGATGCCAAAGCGATAGCTAATGTCATTAAGGGTGGTAAAGAGGGAGATACCTTTGATTATAAAGGCGTATCTTTTACTATTGATACAAAAACTGGTAATGATGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGGCGGTGGTG--G-TAGTGTTAATGATGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAATGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGTGAAAGTAAGATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAATCCACTGGCTGCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACCTCTGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3910 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3911 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | || |||||||| ||| | ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | | |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3912 </Hsp>
|
jpayne@1
|
3913 </Hit_hsps>
|
jpayne@1
|
3914 </Hit>
|
jpayne@1
|
3915 </Iteration_hits>
|
jpayne@1
|
3916 <Iteration_stat>
|
jpayne@1
|
3917 <Statistics>
|
jpayne@1
|
3918 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3919 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3920 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3921 <Statistics_eff-space>81879912</Statistics_eff-space>
|
jpayne@1
|
3922 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3923 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3924 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3925 </Statistics>
|
jpayne@1
|
3926 </Iteration_stat>
|
jpayne@1
|
3927 </Iteration>
|
jpayne@1
|
3928 <Iteration>
|
jpayne@1
|
3929 <Iteration_iter-num>103</Iteration_iter-num>
|
jpayne@1
|
3930 <Iteration_query-ID>Query_103</Iteration_query-ID>
|
jpayne@1
|
3931 <Iteration_query-def>fliC_g,m_Salmonella.enterica_Enteritidis_AY353398_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3932 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3933 <Iteration_hits>
|
jpayne@1
|
3934 <Hit>
|
jpayne@1
|
3935 <Hit_num>1</Hit_num>
|
jpayne@1
|
3936 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3937 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3938 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3939 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3940 <Hit_hsps>
|
jpayne@1
|
3941 <Hsp>
|
jpayne@1
|
3942 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3943 <Hsp_bit-score>2615.98</Hsp_bit-score>
|
jpayne@1
|
3944 <Hsp_score>1416</Hsp_score>
|
jpayne@1
|
3945 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3946 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3947 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3948 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3949 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3950 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3951 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3952 <Hsp_identity>1484</Hsp_identity>
|
jpayne@1
|
3953 <Hsp_positive>1484</Hsp_positive>
|
jpayne@1
|
3954 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
3955 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
3956 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCGCTAGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
3957 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
3958 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| ||||| | || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
3959 </Hsp>
|
jpayne@1
|
3960 </Hit_hsps>
|
jpayne@1
|
3961 </Hit>
|
jpayne@1
|
3962 </Iteration_hits>
|
jpayne@1
|
3963 <Iteration_stat>
|
jpayne@1
|
3964 <Statistics>
|
jpayne@1
|
3965 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
3966 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
3967 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
3968 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
3969 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
3970 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
3971 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
3972 </Statistics>
|
jpayne@1
|
3973 </Iteration_stat>
|
jpayne@1
|
3974 </Iteration>
|
jpayne@1
|
3975 <Iteration>
|
jpayne@1
|
3976 <Iteration_iter-num>104</Iteration_iter-num>
|
jpayne@1
|
3977 <Iteration_query-ID>Query_104</Iteration_query-ID>
|
jpayne@1
|
3978 <Iteration_query-def>fliC_g,p_Salmonella.enterica_Dublin_AY353399_g,m__1518</Iteration_query-def>
|
jpayne@1
|
3979 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
3980 <Iteration_hits>
|
jpayne@1
|
3981 <Hit>
|
jpayne@1
|
3982 <Hit_num>1</Hit_num>
|
jpayne@1
|
3983 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
3984 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
3985 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
3986 <Hit_len>1962</Hit_len>
|
jpayne@1
|
3987 <Hit_hsps>
|
jpayne@1
|
3988 <Hsp>
|
jpayne@1
|
3989 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
3990 <Hsp_bit-score>2604.9</Hsp_bit-score>
|
jpayne@1
|
3991 <Hsp_score>1410</Hsp_score>
|
jpayne@1
|
3992 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
3993 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
3994 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
3995 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
3996 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
3997 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
3998 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
3999 <Hsp_identity>1482</Hsp_identity>
|
jpayne@1
|
4000 <Hsp_positive>1482</Hsp_positive>
|
jpayne@1
|
4001 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4002 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4003 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCATTGGCGCGGCGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4004 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4005 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| || ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4006 </Hsp>
|
jpayne@1
|
4007 </Hit_hsps>
|
jpayne@1
|
4008 </Hit>
|
jpayne@1
|
4009 </Iteration_hits>
|
jpayne@1
|
4010 <Iteration_stat>
|
jpayne@1
|
4011 <Statistics>
|
jpayne@1
|
4012 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4013 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4014 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4015 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
4016 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4017 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4018 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4019 </Statistics>
|
jpayne@1
|
4020 </Iteration_stat>
|
jpayne@1
|
4021 </Iteration>
|
jpayne@1
|
4022 <Iteration>
|
jpayne@1
|
4023 <Iteration_iter-num>105</Iteration_iter-num>
|
jpayne@1
|
4024 <Iteration_query-ID>Query_105</Iteration_query-ID>
|
jpayne@1
|
4025 <Iteration_query-def>fliC_g,p_Salmonella.enterica_Dublin_AY353400_g,m__1518</Iteration_query-def>
|
jpayne@1
|
4026 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
4027 <Iteration_hits>
|
jpayne@1
|
4028 <Hit>
|
jpayne@1
|
4029 <Hit_num>1</Hit_num>
|
jpayne@1
|
4030 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4031 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4032 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4033 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4034 <Hit_hsps>
|
jpayne@1
|
4035 <Hsp>
|
jpayne@1
|
4036 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4037 <Hsp_bit-score>2604.9</Hsp_bit-score>
|
jpayne@1
|
4038 <Hsp_score>1410</Hsp_score>
|
jpayne@1
|
4039 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4040 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4041 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
4042 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4043 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4044 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4045 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4046 <Hsp_identity>1482</Hsp_identity>
|
jpayne@1
|
4047 <Hsp_positive>1482</Hsp_positive>
|
jpayne@1
|
4048 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4049 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4050 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCATTGGCGCGGCGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4051 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4052 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| || ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4053 </Hsp>
|
jpayne@1
|
4054 </Hit_hsps>
|
jpayne@1
|
4055 </Hit>
|
jpayne@1
|
4056 </Iteration_hits>
|
jpayne@1
|
4057 <Iteration_stat>
|
jpayne@1
|
4058 <Statistics>
|
jpayne@1
|
4059 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4060 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4061 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4062 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
4063 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4064 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4065 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4066 </Statistics>
|
jpayne@1
|
4067 </Iteration_stat>
|
jpayne@1
|
4068 </Iteration>
|
jpayne@1
|
4069 <Iteration>
|
jpayne@1
|
4070 <Iteration_iter-num>106</Iteration_iter-num>
|
jpayne@1
|
4071 <Iteration_query-ID>Query_106</Iteration_query-ID>
|
jpayne@1
|
4072 <Iteration_query-def>fliC_g,p,s_Salmonella.enterica_Naestved_AY353401_g,m__1518</Iteration_query-def>
|
jpayne@1
|
4073 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
4074 <Iteration_hits>
|
jpayne@1
|
4075 <Hit>
|
jpayne@1
|
4076 <Hit_num>1</Hit_num>
|
jpayne@1
|
4077 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4078 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4079 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4080 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4081 <Hit_hsps>
|
jpayne@1
|
4082 <Hsp>
|
jpayne@1
|
4083 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4084 <Hsp_bit-score>2599.36</Hsp_bit-score>
|
jpayne@1
|
4085 <Hsp_score>1407</Hsp_score>
|
jpayne@1
|
4086 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4087 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4088 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
4089 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4090 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4091 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4092 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4093 <Hsp_identity>1481</Hsp_identity>
|
jpayne@1
|
4094 <Hsp_positive>1481</Hsp_positive>
|
jpayne@1
|
4095 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4096 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4097 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTGCTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCATTGGCGCGGCGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4098 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4099 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| ||||||||| |||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| || ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4100 </Hsp>
|
jpayne@1
|
4101 </Hit_hsps>
|
jpayne@1
|
4102 </Hit>
|
jpayne@1
|
4103 </Iteration_hits>
|
jpayne@1
|
4104 <Iteration_stat>
|
jpayne@1
|
4105 <Statistics>
|
jpayne@1
|
4106 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4107 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4108 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4109 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
4110 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4111 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4112 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4113 </Statistics>
|
jpayne@1
|
4114 </Iteration_stat>
|
jpayne@1
|
4115 </Iteration>
|
jpayne@1
|
4116 <Iteration>
|
jpayne@1
|
4117 <Iteration_iter-num>107</Iteration_iter-num>
|
jpayne@1
|
4118 <Iteration_query-ID>Query_107</Iteration_query-ID>
|
jpayne@1
|
4119 <Iteration_query-def>fliC_g,p,u_Salmonella.enterica_Rostock_AY353402_g,m__1518</Iteration_query-def>
|
jpayne@1
|
4120 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
4121 <Iteration_hits>
|
jpayne@1
|
4122 <Hit>
|
jpayne@1
|
4123 <Hit_num>1</Hit_num>
|
jpayne@1
|
4124 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4125 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4126 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4127 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4128 <Hit_hsps>
|
jpayne@1
|
4129 <Hsp>
|
jpayne@1
|
4130 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4131 <Hsp_bit-score>2599.36</Hsp_bit-score>
|
jpayne@1
|
4132 <Hsp_score>1407</Hsp_score>
|
jpayne@1
|
4133 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4134 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4135 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
4136 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4137 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4138 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4139 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4140 <Hsp_identity>1481</Hsp_identity>
|
jpayne@1
|
4141 <Hsp_positive>1481</Hsp_positive>
|
jpayne@1
|
4142 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4143 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4144 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGGCATTGGCGCGGCGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4145 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4146 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| | ||| || ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4147 </Hsp>
|
jpayne@1
|
4148 </Hit_hsps>
|
jpayne@1
|
4149 </Hit>
|
jpayne@1
|
4150 </Iteration_hits>
|
jpayne@1
|
4151 <Iteration_stat>
|
jpayne@1
|
4152 <Statistics>
|
jpayne@1
|
4153 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4154 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4155 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4156 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
4157 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4158 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4159 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4160 </Statistics>
|
jpayne@1
|
4161 </Iteration_stat>
|
jpayne@1
|
4162 </Iteration>
|
jpayne@1
|
4163 <Iteration>
|
jpayne@1
|
4164 <Iteration_iter-num>108</Iteration_iter-num>
|
jpayne@1
|
4165 <Iteration_query-ID>Query_108</Iteration_query-ID>
|
jpayne@1
|
4166 <Iteration_query-def>fliC_g,q_Salmonella.enterica_Moscow_AY353403_g,m__1518</Iteration_query-def>
|
jpayne@1
|
4167 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
4168 <Iteration_hits>
|
jpayne@1
|
4169 <Hit>
|
jpayne@1
|
4170 <Hit_num>1</Hit_num>
|
jpayne@1
|
4171 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4172 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4173 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4174 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4175 <Hit_hsps>
|
jpayne@1
|
4176 <Hsp>
|
jpayne@1
|
4177 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4178 <Hsp_bit-score>2610.44</Hsp_bit-score>
|
jpayne@1
|
4179 <Hsp_score>1413</Hsp_score>
|
jpayne@1
|
4180 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4181 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4182 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
4183 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4184 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4185 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4186 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4187 <Hsp_identity>1483</Hsp_identity>
|
jpayne@1
|
4188 <Hsp_positive>1483</Hsp_positive>
|
jpayne@1
|
4189 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4190 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4191 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGGCGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGAATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4192 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4193 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || |||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4194 </Hsp>
|
jpayne@1
|
4195 </Hit_hsps>
|
jpayne@1
|
4196 </Hit>
|
jpayne@1
|
4197 </Iteration_hits>
|
jpayne@1
|
4198 <Iteration_stat>
|
jpayne@1
|
4199 <Statistics>
|
jpayne@1
|
4200 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4201 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4202 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4203 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
4204 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4205 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4206 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4207 </Statistics>
|
jpayne@1
|
4208 </Iteration_stat>
|
jpayne@1
|
4209 </Iteration>
|
jpayne@1
|
4210 <Iteration>
|
jpayne@1
|
4211 <Iteration_iter-num>109</Iteration_iter-num>
|
jpayne@1
|
4212 <Iteration_query-ID>Query_109</Iteration_query-ID>
|
jpayne@1
|
4213 <Iteration_query-def>fliC_g,q_Salmonella.enterica_Moscow_AY353404_g,m__1518</Iteration_query-def>
|
jpayne@1
|
4214 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
4215 <Iteration_hits>
|
jpayne@1
|
4216 <Hit>
|
jpayne@1
|
4217 <Hit_num>1</Hit_num>
|
jpayne@1
|
4218 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4219 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4220 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4221 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4222 <Hit_hsps>
|
jpayne@1
|
4223 <Hsp>
|
jpayne@1
|
4224 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4225 <Hsp_bit-score>2604.9</Hsp_bit-score>
|
jpayne@1
|
4226 <Hsp_score>1410</Hsp_score>
|
jpayne@1
|
4227 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4228 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4229 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
4230 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4231 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4232 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4233 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4234 <Hsp_identity>1482</Hsp_identity>
|
jpayne@1
|
4235 <Hsp_positive>1482</Hsp_positive>
|
jpayne@1
|
4236 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4237 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4238 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGGCGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4239 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4240 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||| ||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4241 </Hsp>
|
jpayne@1
|
4242 </Hit_hsps>
|
jpayne@1
|
4243 </Hit>
|
jpayne@1
|
4244 </Iteration_hits>
|
jpayne@1
|
4245 <Iteration_stat>
|
jpayne@1
|
4246 <Statistics>
|
jpayne@1
|
4247 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4248 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4249 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4250 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
4251 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4252 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4253 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4254 </Statistics>
|
jpayne@1
|
4255 </Iteration_stat>
|
jpayne@1
|
4256 </Iteration>
|
jpayne@1
|
4257 <Iteration>
|
jpayne@1
|
4258 <Iteration_iter-num>110</Iteration_iter-num>
|
jpayne@1
|
4259 <Iteration_query-ID>Query_110</Iteration_query-ID>
|
jpayne@1
|
4260 <Iteration_query-def>fliC_g,s,t_Salmonella.enterica_Missouri_AY353405_g,m__1518</Iteration_query-def>
|
jpayne@1
|
4261 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
4262 <Iteration_hits>
|
jpayne@1
|
4263 <Hit>
|
jpayne@1
|
4264 <Hit_num>1</Hit_num>
|
jpayne@1
|
4265 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4266 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4267 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4268 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4269 <Hit_hsps>
|
jpayne@1
|
4270 <Hsp>
|
jpayne@1
|
4271 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4272 <Hsp_bit-score>2787.71</Hsp_bit-score>
|
jpayne@1
|
4273 <Hsp_score>1509</Hsp_score>
|
jpayne@1
|
4274 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4275 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4276 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
4277 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4278 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4279 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4280 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4281 <Hsp_identity>1515</Hsp_identity>
|
jpayne@1
|
4282 <Hsp_positive>1515</Hsp_positive>
|
jpayne@1
|
4283 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4284 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4285 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAAGCTGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4286 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4287 <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4288 </Hsp>
|
jpayne@1
|
4289 </Hit_hsps>
|
jpayne@1
|
4290 </Hit>
|
jpayne@1
|
4291 </Iteration_hits>
|
jpayne@1
|
4292 <Iteration_stat>
|
jpayne@1
|
4293 <Statistics>
|
jpayne@1
|
4294 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4295 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4296 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4297 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
4298 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4299 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4300 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4301 </Statistics>
|
jpayne@1
|
4302 </Iteration_stat>
|
jpayne@1
|
4303 </Iteration>
|
jpayne@1
|
4304 <Iteration>
|
jpayne@1
|
4305 <Iteration_iter-num>111</Iteration_iter-num>
|
jpayne@1
|
4306 <Iteration_query-ID>Query_111</Iteration_query-ID>
|
jpayne@1
|
4307 <Iteration_query-def>fliC_g,s,t_Salmonella.enterica_Senftenberg_AY353406_g,m__1518</Iteration_query-def>
|
jpayne@1
|
4308 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
4309 <Iteration_hits>
|
jpayne@1
|
4310 <Hit>
|
jpayne@1
|
4311 <Hit_num>1</Hit_num>
|
jpayne@1
|
4312 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4313 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4314 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4315 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4316 <Hit_hsps>
|
jpayne@1
|
4317 <Hsp>
|
jpayne@1
|
4318 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4319 <Hsp_bit-score>2776.63</Hsp_bit-score>
|
jpayne@1
|
4320 <Hsp_score>1503</Hsp_score>
|
jpayne@1
|
4321 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4322 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4323 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
4324 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4325 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4326 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4327 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4328 <Hsp_identity>1513</Hsp_identity>
|
jpayne@1
|
4329 <Hsp_positive>1513</Hsp_positive>
|
jpayne@1
|
4330 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4331 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4332 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATTCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4333 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4334 <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4335 </Hsp>
|
jpayne@1
|
4336 </Hit_hsps>
|
jpayne@1
|
4337 </Hit>
|
jpayne@1
|
4338 </Iteration_hits>
|
jpayne@1
|
4339 <Iteration_stat>
|
jpayne@1
|
4340 <Statistics>
|
jpayne@1
|
4341 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4342 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4343 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4344 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
4345 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4346 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4347 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4348 </Statistics>
|
jpayne@1
|
4349 </Iteration_stat>
|
jpayne@1
|
4350 </Iteration>
|
jpayne@1
|
4351 <Iteration>
|
jpayne@1
|
4352 <Iteration_iter-num>112</Iteration_iter-num>
|
jpayne@1
|
4353 <Iteration_query-ID>Query_112</Iteration_query-ID>
|
jpayne@1
|
4354 <Iteration_query-def>fliC_g,t_Salmonella.enterica_Agodi_AY353407_g,m__1518</Iteration_query-def>
|
jpayne@1
|
4355 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
4356 <Iteration_hits>
|
jpayne@1
|
4357 <Hit>
|
jpayne@1
|
4358 <Hit_num>1</Hit_num>
|
jpayne@1
|
4359 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4360 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4361 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4362 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4363 <Hit_hsps>
|
jpayne@1
|
4364 <Hsp>
|
jpayne@1
|
4365 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4366 <Hsp_bit-score>2748.93</Hsp_bit-score>
|
jpayne@1
|
4367 <Hsp_score>1488</Hsp_score>
|
jpayne@1
|
4368 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4369 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4370 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
4371 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4372 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4373 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4374 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4375 <Hsp_identity>1508</Hsp_identity>
|
jpayne@1
|
4376 <Hsp_positive>1508</Hsp_positive>
|
jpayne@1
|
4377 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4378 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4379 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATTAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4380 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4381 <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4382 </Hsp>
|
jpayne@1
|
4383 </Hit_hsps>
|
jpayne@1
|
4384 </Hit>
|
jpayne@1
|
4385 </Iteration_hits>
|
jpayne@1
|
4386 <Iteration_stat>
|
jpayne@1
|
4387 <Statistics>
|
jpayne@1
|
4388 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4389 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4390 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4391 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
4392 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4393 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4394 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4395 </Statistics>
|
jpayne@1
|
4396 </Iteration_stat>
|
jpayne@1
|
4397 </Iteration>
|
jpayne@1
|
4398 <Iteration>
|
jpayne@1
|
4399 <Iteration_iter-num>113</Iteration_iter-num>
|
jpayne@1
|
4400 <Iteration_query-ID>Query_113</Iteration_query-ID>
|
jpayne@1
|
4401 <Iteration_query-def>fliC_g,t_Salmonella.enterica_II.16:g,t:1,5_AY353408_g,m__1518</Iteration_query-def>
|
jpayne@1
|
4402 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
4403 <Iteration_hits>
|
jpayne@1
|
4404 <Hit>
|
jpayne@1
|
4405 <Hit_num>1</Hit_num>
|
jpayne@1
|
4406 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4407 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4408 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4409 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4410 <Hit_hsps>
|
jpayne@1
|
4411 <Hsp>
|
jpayne@1
|
4412 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4413 <Hsp_bit-score>2516.26</Hsp_bit-score>
|
jpayne@1
|
4414 <Hsp_score>1362</Hsp_score>
|
jpayne@1
|
4415 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4416 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4417 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
4418 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4419 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4420 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4421 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4422 <Hsp_identity>1466</Hsp_identity>
|
jpayne@1
|
4423 <Hsp_positive>1466</Hsp_positive>
|
jpayne@1
|
4424 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4425 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4426 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCTCAGTCCTCACTGAGTTCCGCTATCGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATTGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCGGCAGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAATGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGTGAAAGTAAGATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAATCCACTGGCTGCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCGCTGGGGGCAATTCAGAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCCGGTACCTCTGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4427 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4428 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4429 </Hsp>
|
jpayne@1
|
4430 </Hit_hsps>
|
jpayne@1
|
4431 </Hit>
|
jpayne@1
|
4432 </Iteration_hits>
|
jpayne@1
|
4433 <Iteration_stat>
|
jpayne@1
|
4434 <Statistics>
|
jpayne@1
|
4435 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4436 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4437 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4438 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
4439 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4440 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4441 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4442 </Statistics>
|
jpayne@1
|
4443 </Iteration_stat>
|
jpayne@1
|
4444 </Iteration>
|
jpayne@1
|
4445 <Iteration>
|
jpayne@1
|
4446 <Iteration_iter-num>114</Iteration_iter-num>
|
jpayne@1
|
4447 <Iteration_query-ID>Query_114</Iteration_query-ID>
|
jpayne@1
|
4448 <Iteration_query-def>fliC_m,p,t,u_Salmonella.enterica_Haelsingborg_AY353409_g,m__1527</Iteration_query-def>
|
jpayne@1
|
4449 <Iteration_query-len>1527</Iteration_query-len>
|
jpayne@1
|
4450 <Iteration_hits>
|
jpayne@1
|
4451 <Hit>
|
jpayne@1
|
4452 <Hit_num>1</Hit_num>
|
jpayne@1
|
4453 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4454 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4455 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4456 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4457 <Hit_hsps>
|
jpayne@1
|
4458 <Hsp>
|
jpayne@1
|
4459 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4460 <Hsp_bit-score>2241.11</Hsp_bit-score>
|
jpayne@1
|
4461 <Hsp_score>1213</Hsp_score>
|
jpayne@1
|
4462 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4463 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4464 <Hsp_query-to>1527</Hsp_query-to>
|
jpayne@1
|
4465 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4466 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4467 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4468 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4469 <Hsp_identity>1426</Hsp_identity>
|
jpayne@1
|
4470 <Hsp_positive>1426</Hsp_positive>
|
jpayne@1
|
4471 <Hsp_gaps>13</Hsp_gaps>
|
jpayne@1
|
4472 <Hsp_align-len>1529</Hsp_align-len>
|
jpayne@1
|
4473 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGGTATGATACCTATGCTGTTGGTGCCAATAAATATCGCGTGGATGTCAACTCAGGGGCGGTAGTAACTGACACCACTGCTCCAACTGTTCCTGATAAAGTATACGTAAACGCTGCAAACGGTCAGTTGACAACTGCCGATGCGCAAAATAACACCGCGGTTGATTTGTTTAAATCTACTAAATCTGTTGCAGGTACTGACGATGCCAAGGCTATCGCAACTTCTATCAAAGGCGGAAAAGTTGGTGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATATAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACCATCAATGGTGAAAAAGTTACATTAACAATTAGTGATATTAGCGTGGGTGCAGCAGACGTAAAT-A-GCGCGAAGATTCAATCAAGTAAAGATGTTTATACTTCCGTTGTAAGCGGTCAGTTTACTTTTGCTGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCCAAAGCGCAGATCCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4474 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATG--A-TGCAGCACC-G-----GATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGC-C-ACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4475 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| | |||||| |||||||||| || ||| | || ||||| || ||||||||||| | ||| || | | ||||||||||| ||||| || |||||||||||||||||||||| ||||||| | || ||||| |||||| | | || || | ||||||||| ||| ||||| || || |||||||| || || | | | || || || || || | || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | |||||||| || |||||||| | || ||| | || | | | |||||||| ||| |||||||||| || || || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4476 </Hsp>
|
jpayne@1
|
4477 </Hit_hsps>
|
jpayne@1
|
4478 </Hit>
|
jpayne@1
|
4479 </Iteration_hits>
|
jpayne@1
|
4480 <Iteration_stat>
|
jpayne@1
|
4481 <Statistics>
|
jpayne@1
|
4482 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4483 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4484 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4485 <Statistics_eff-space>82536264</Statistics_eff-space>
|
jpayne@1
|
4486 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4487 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4488 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4489 </Statistics>
|
jpayne@1
|
4490 </Iteration_stat>
|
jpayne@1
|
4491 </Iteration>
|
jpayne@1
|
4492 <Iteration>
|
jpayne@1
|
4493 <Iteration_iter-num>115</Iteration_iter-num>
|
jpayne@1
|
4494 <Iteration_query-ID>Query_115</Iteration_query-ID>
|
jpayne@1
|
4495 <Iteration_query-def>fliC_m,p,t,u_Salmonella.enterica_Haelsingborg_AY353410_g,m__1527</Iteration_query-def>
|
jpayne@1
|
4496 <Iteration_query-len>1527</Iteration_query-len>
|
jpayne@1
|
4497 <Iteration_hits>
|
jpayne@1
|
4498 <Hit>
|
jpayne@1
|
4499 <Hit_num>1</Hit_num>
|
jpayne@1
|
4500 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4501 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4502 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4503 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4504 <Hit_hsps>
|
jpayne@1
|
4505 <Hsp>
|
jpayne@1
|
4506 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4507 <Hsp_bit-score>2235.57</Hsp_bit-score>
|
jpayne@1
|
4508 <Hsp_score>1210</Hsp_score>
|
jpayne@1
|
4509 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4510 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4511 <Hsp_query-to>1527</Hsp_query-to>
|
jpayne@1
|
4512 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4513 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4514 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4515 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4516 <Hsp_identity>1425</Hsp_identity>
|
jpayne@1
|
4517 <Hsp_positive>1425</Hsp_positive>
|
jpayne@1
|
4518 <Hsp_gaps>13</Hsp_gaps>
|
jpayne@1
|
4519 <Hsp_align-len>1529</Hsp_align-len>
|
jpayne@1
|
4520 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGGTATGATACCTATGCTGTTGGTGCCAATAAATATCGCGTGGATGTCAACTCAGGGGCGGTAGTAACTGACACCACTGCTCCAACTGTTCCTGATAAAGTATACGTAAACGCTGCAAACGGTCAGTTGACAACTGCCGATGCGCAAAATAACACCGCGGTTGATTTGTTTAAATCTACTAAATCTGTTGCAGGTACTGACGATGCCAAGGCTATCGCAACTTCTATCAAAGGCGGAAAAGTTGGTGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATATAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACCATCAATGGTGAAAAAGTTACATTAACAATTAGTGATATTGGCGTGGGTGCAGCAGACGTAAAT-A-GCGCGAAGATTCAATCAAGTAAAGATGTTTATACTTCCGTTGTAAGCGGTCAGTTTACTTTTGCTGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCCAAAGCGCAGATCCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4521 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATG--A-TGCAGCACC-G-----GATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGC-C-ACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4522 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| | |||||| |||||||||| || ||| | || ||||| || ||||||||||| | ||| || | | ||||||||||| ||||| || |||||||||||||||||||||| ||||||| | || ||||| |||||| | | || || | ||||||||| ||| ||||| || || |||||||| || || | | | || || || || || | || |||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||| || |||||||| | || ||| | || | | | |||||||| ||| |||||||||| || || || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4523 </Hsp>
|
jpayne@1
|
4524 </Hit_hsps>
|
jpayne@1
|
4525 </Hit>
|
jpayne@1
|
4526 </Iteration_hits>
|
jpayne@1
|
4527 <Iteration_stat>
|
jpayne@1
|
4528 <Statistics>
|
jpayne@1
|
4529 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4530 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4531 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4532 <Statistics_eff-space>82536264</Statistics_eff-space>
|
jpayne@1
|
4533 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4534 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4535 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4536 </Statistics>
|
jpayne@1
|
4537 </Iteration_stat>
|
jpayne@1
|
4538 </Iteration>
|
jpayne@1
|
4539 <Iteration>
|
jpayne@1
|
4540 <Iteration_iter-num>116</Iteration_iter-num>
|
jpayne@1
|
4541 <Iteration_query-ID>Query_116</Iteration_query-ID>
|
jpayne@1
|
4542 <Iteration_query-def>fliC_m,t_Salmonella.enterica_Oranienburg_AY353411_g,m__1527</Iteration_query-def>
|
jpayne@1
|
4543 <Iteration_query-len>1527</Iteration_query-len>
|
jpayne@1
|
4544 <Iteration_hits>
|
jpayne@1
|
4545 <Hit>
|
jpayne@1
|
4546 <Hit_num>1</Hit_num>
|
jpayne@1
|
4547 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4548 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4549 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4550 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4551 <Hit_hsps>
|
jpayne@1
|
4552 <Hsp>
|
jpayne@1
|
4553 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4554 <Hsp_bit-score>2241.11</Hsp_bit-score>
|
jpayne@1
|
4555 <Hsp_score>1213</Hsp_score>
|
jpayne@1
|
4556 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4557 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4558 <Hsp_query-to>1527</Hsp_query-to>
|
jpayne@1
|
4559 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4560 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4561 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4562 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4563 <Hsp_identity>1426</Hsp_identity>
|
jpayne@1
|
4564 <Hsp_positive>1426</Hsp_positive>
|
jpayne@1
|
4565 <Hsp_gaps>13</Hsp_gaps>
|
jpayne@1
|
4566 <Hsp_align-len>1529</Hsp_align-len>
|
jpayne@1
|
4567 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGGTATGATACCTATGCTGTTGGTGCCAATAAATATCGCGTGGATGTCAACTCAGGGGCGGTAGTAACTGACACCACTGCTCCAACTGTTCCTGATAAAGTATACGTAAACGCTGCAAACGGTCAGTTGACAACTGCCGATGCGCAAAATAACACCGCGGTTGATTTGTTTAAATCTACTAAATCTGCTGCAGGTACTGACGATGCCAAGGCTATCGCAACTTCTATCAAAGGCGGAAAAGTTGGTGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACCATCAATGGTGAAAAAGTTACATTAACAATTAGTGATATTGGCGCGAGTGCAACAGACGTAAAT-A-GCGCGAAGATTCAATCAAGTAAAGATGTTTATACTTCCGTTGTAAGCGGTCAGTTTACTTTTGCTGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCCAAAGCGCAGATCCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4568 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATG--A-TGCAGCACC-G-----GATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGC-C-ACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4569 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| | |||||| |||||||||| || ||| | || ||||| || ||||||||||| | ||| || | | ||||||||||| ||||| || |||||||||||||||||||||| ||||||| | || ||||| |||||| | | || || | ||||||||| |||| ||||| || || |||||||| || || | | | || || || || || | || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||| ||| ||||| | | || ||| | || | | | |||||||| ||| |||||||||| || || || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4570 </Hsp>
|
jpayne@1
|
4571 </Hit_hsps>
|
jpayne@1
|
4572 </Hit>
|
jpayne@1
|
4573 </Iteration_hits>
|
jpayne@1
|
4574 <Iteration_stat>
|
jpayne@1
|
4575 <Statistics>
|
jpayne@1
|
4576 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4577 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4578 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4579 <Statistics_eff-space>82536264</Statistics_eff-space>
|
jpayne@1
|
4580 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4581 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4582 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4583 </Statistics>
|
jpayne@1
|
4584 </Iteration_stat>
|
jpayne@1
|
4585 </Iteration>
|
jpayne@1
|
4586 <Iteration>
|
jpayne@1
|
4587 <Iteration_iter-num>117</Iteration_iter-num>
|
jpayne@1
|
4588 <Iteration_query-ID>Query_117</Iteration_query-ID>
|
jpayne@1
|
4589 <Iteration_query-def>fliC_m,t_Salmonella.enterica_Oranienburg_AY353412_g,m__1527</Iteration_query-def>
|
jpayne@1
|
4590 <Iteration_query-len>1527</Iteration_query-len>
|
jpayne@1
|
4591 <Iteration_hits>
|
jpayne@1
|
4592 <Hit>
|
jpayne@1
|
4593 <Hit_num>1</Hit_num>
|
jpayne@1
|
4594 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4595 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4596 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4597 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4598 <Hit_hsps>
|
jpayne@1
|
4599 <Hsp>
|
jpayne@1
|
4600 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4601 <Hsp_bit-score>2241.11</Hsp_bit-score>
|
jpayne@1
|
4602 <Hsp_score>1213</Hsp_score>
|
jpayne@1
|
4603 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4604 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4605 <Hsp_query-to>1527</Hsp_query-to>
|
jpayne@1
|
4606 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4607 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4608 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4609 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4610 <Hsp_identity>1426</Hsp_identity>
|
jpayne@1
|
4611 <Hsp_positive>1426</Hsp_positive>
|
jpayne@1
|
4612 <Hsp_gaps>13</Hsp_gaps>
|
jpayne@1
|
4613 <Hsp_align-len>1529</Hsp_align-len>
|
jpayne@1
|
4614 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGGTATGATACCTATGCTGTTGGTGCCAATAAATATCGCGTGGATGTCAACTCAGGGGCGGTAGTAACTGACACCACTGCTCCAACTGTTCCTGATAAAGTATACGTAAACGCTGCAAACGGTCAGTTGACAACTGCCGATGCGCAAAATAACACCGCGGTTGATTTGTTTAAATCTACTAAATCTGCTGCAGGTACTGACGATGCCAAGGCTATCGCAACTTCTATCAAAGGCGGAAAAGTTGGTGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACCATCAATGGTGAAAAAGTTACATTAACAATTAGTGATATTGGCGCGAGTGCAACAGACGTAAAT-A-GCGCGAAGATTCAATCAAGTAAAGATGTTTATACTTCCGTTGTAAGCGGTCAGTTTACTTTTGCTGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCCAAAGCGCAGATCCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4615 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATG--A-TGCAGCACC-G-----GATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGC-C-ACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4616 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || || |||||||| | |||||| |||||||||| || ||| | || ||||| || ||||||||||| | ||| || | | ||||||||||| ||||| || |||||||||||||||||||||| ||||||| | || ||||| |||||| | | || || | ||||||||| |||| ||||| || || |||||||| || || | | | || || || || || | || ||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||||||||||||||||| ||||| | ||||||| ||| ||||| | | || ||| | || | | | |||||||| ||| |||||||||| || || || | ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4617 </Hsp>
|
jpayne@1
|
4618 </Hit_hsps>
|
jpayne@1
|
4619 </Hit>
|
jpayne@1
|
4620 </Iteration_hits>
|
jpayne@1
|
4621 <Iteration_stat>
|
jpayne@1
|
4622 <Statistics>
|
jpayne@1
|
4623 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4624 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4625 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4626 <Statistics_eff-space>82536264</Statistics_eff-space>
|
jpayne@1
|
4627 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4628 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4629 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4630 </Statistics>
|
jpayne@1
|
4631 </Iteration_stat>
|
jpayne@1
|
4632 </Iteration>
|
jpayne@1
|
4633 <Iteration>
|
jpayne@1
|
4634 <Iteration_iter-num>118</Iteration_iter-num>
|
jpayne@1
|
4635 <Iteration_query-ID>Query_118</Iteration_query-ID>
|
jpayne@1
|
4636 <Iteration_query-def>fliC_g,z51_Salmonella.enterica_Travis_AY353413_g,m__1515</Iteration_query-def>
|
jpayne@1
|
4637 <Iteration_query-len>1515</Iteration_query-len>
|
jpayne@1
|
4638 <Iteration_hits>
|
jpayne@1
|
4639 <Hit>
|
jpayne@1
|
4640 <Hit_num>1</Hit_num>
|
jpayne@1
|
4641 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4642 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4643 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4644 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4645 <Hit_hsps>
|
jpayne@1
|
4646 <Hsp>
|
jpayne@1
|
4647 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4648 <Hsp_bit-score>1764.67</Hsp_bit-score>
|
jpayne@1
|
4649 <Hsp_score>955</Hsp_score>
|
jpayne@1
|
4650 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4651 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4652 <Hsp_query-to>1515</Hsp_query-to>
|
jpayne@1
|
4653 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4654 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4655 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4656 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4657 <Hsp_identity>1332</Hsp_identity>
|
jpayne@1
|
4658 <Hsp_positive>1332</Hsp_positive>
|
jpayne@1
|
4659 <Hsp_gaps>5</Hsp_gaps>
|
jpayne@1
|
4660 <Hsp_align-len>1519</Hsp_align-len>
|
jpayne@1
|
4661 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGACGCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAATGGTACTAACTCTGATTCCGATTTGAAATCCATTCAGGATGAAATCCAGCAGCGCTTATCGGAAATCGACCGTGTTTCTAACCAGACTCAGTTTAACGGTGTTAAAGTCCTGTCTCAGGATAATCAGATGAAAATTCAGGTGGGCGCTAACGATGGCGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGTCTGGATGGATTCAATGTTAACGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGATACGTATACTGCTGGTGCTAATACTTATCGCGTAGATATTAATTCTGGAGC---AGTAACTGATGATGCTGGTACCG-ATAAGATTTACGTAAATGCAGCAAACGGTCAGCTCACAACTGATGATGCACAGAATAACACTGCAGTTGATCTATTTAAGACAGCAAAATCATCAGCAGGTACAGCTGAATCTAAAGCAATAGCTGGCGCTATTAAAGGTGGTAAAGAAGGAGATACTTTTGATTATAAAGGTGTTTCTTTCACCATTGATACAAAGAATGGCGCTGACGGTAATGGTACTGTTTCCACTATGATCAATGGTGAAAAAGTTACGTTGACTGTTGCTGATATTACCACTGGTGCGGCGGACGTTAATGCGGCTACCTTACAATCAAGTAAAAATGTTTATACATCTGTAGTAAACGGCCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTAGAAGCAAATAATGCTGTTAAAGGTGAAAGTAAAATCACGGTAAACGGCGCTGAGTATACAGCTAACGCTGAAGGTGATAAAGTTACCTTAGCAGGTAAAACCATGTTTATTGATAAGACCGCTTCTGGCGTTAGCACATTAATCAATGAAGATGCTGCTGCTGCTAAGAAGAGTACAGCTAATCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGATGCTGTACGTTCTTCACTGGGGGCGATCCAGAATCGCTTTGATTCTGCCATCACTAACCTGGGCAACACGGTAAATAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAGCGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4662 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGC-ACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4663 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||||| |||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||| ||||||| || ||||||||||| ||||| || | |||||||| || |||||||| |||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||| || ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||| | || ||||| ||| ||||| |||||||||||||| || || ||||||||||||||| | |||| |||| | || ||||||||||||||||||||| | |||||||| ||||| |||| |||||||| ||| | ||||| ||||| | ||||| | || ||||| | |||| | || || |||||| | || ||||| |||||||| ||||||||||| ||||||||||||||||| ||||| || ||||||||||| ||| ||||||||||||||| ||||| |||| ||||||||||||||||||||||| ||||| |||||||||||| ||||||| ||| | ||||||| || |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||| || ||||||||||| || ||||| || ||||| ||||| |||||||| | |||||||| || |||||||| || |||||||||||||||||||| || ||||||||||| || ||||||||||||||||| ||||| || || ||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||| || || |||||||| |||||||| || || || || |||||||| ||||| || ||||| ||||| ||||||| || ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4664 </Hsp>
|
jpayne@1
|
4665 </Hit_hsps>
|
jpayne@1
|
4666 </Hit>
|
jpayne@1
|
4667 </Iteration_hits>
|
jpayne@1
|
4668 <Iteration_stat>
|
jpayne@1
|
4669 <Statistics>
|
jpayne@1
|
4670 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4671 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4672 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4673 <Statistics_eff-space>81879912</Statistics_eff-space>
|
jpayne@1
|
4674 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4675 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4676 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4677 </Statistics>
|
jpayne@1
|
4678 </Iteration_stat>
|
jpayne@1
|
4679 </Iteration>
|
jpayne@1
|
4680 <Iteration>
|
jpayne@1
|
4681 <Iteration_iter-num>119</Iteration_iter-num>
|
jpayne@1
|
4682 <Iteration_query-ID>Query_119</Iteration_query-ID>
|
jpayne@1
|
4683 <Iteration_query-def>fliC_g,z51_Salmonella.enterica_IIIa.45:g,z51:-_AY353414_g,m__1515</Iteration_query-def>
|
jpayne@1
|
4684 <Iteration_query-len>1515</Iteration_query-len>
|
jpayne@1
|
4685 <Iteration_hits>
|
jpayne@1
|
4686 <Hit>
|
jpayne@1
|
4687 <Hit_num>1</Hit_num>
|
jpayne@1
|
4688 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4689 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4690 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4691 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4692 <Hit_hsps>
|
jpayne@1
|
4693 <Hsp>
|
jpayne@1
|
4694 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4695 <Hsp_bit-score>1714.81</Hsp_bit-score>
|
jpayne@1
|
4696 <Hsp_score>928</Hsp_score>
|
jpayne@1
|
4697 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4698 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4699 <Hsp_query-to>1515</Hsp_query-to>
|
jpayne@1
|
4700 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4701 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4702 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4703 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4704 <Hsp_identity>1325</Hsp_identity>
|
jpayne@1
|
4705 <Hsp_positive>1325</Hsp_positive>
|
jpayne@1
|
4706 <Hsp_gaps>9</Hsp_gaps>
|
jpayne@1
|
4707 <Hsp_align-len>1521</Hsp_align-len>
|
jpayne@1
|
4708 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCTCACTGAGTTCCGCTATCGAGCGTTTGTCCTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATCAAAGGACTGACTCAGGCTTCCCGTAATGCGAACGACGGTATCTCCATTGCGCAGACCACCGAAGGGGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATTCAGGATGAAATTCAGCAGCG-CTTATCGGAAATTGACCGTGTTTCTAACCAGACTCAGTTTAACGGTGTTAAAGTCCTGTCTCAGGATAATCAGATGAAAATTCAGGTGGGCGCTAACGATGGCGAGACTATTACCATTGATCTACAAAAAATTGATGTGAAAAGTCTTGGTCTGGATGGGTTCAACGTGAATGGGCCTAAACAAGCAACCGCTGGG-GATTTGAAATCTAATTTCAAAAACGTTACTGGTTATGATACGTATGCTGTTGGTGCTGATAGTTATCGTGTAGATATTAATTCTGGAGC---AGTAACTGATGATGCTGGTACCG-ATAAGATTTACGTAAACGCAGCAAACGGTAAACTCACAACTGATGATGCACAGAATAACACCGCAGTTGATCTATTTAAGACAACAAAATCATCAGCCGGTACAGCTGAATCTAAAGCAATTGCTACCGCTATTAAAGGTGGTAAAGAAGGAGATACTTTTGATTATAAAGGTGTTTCTTTTACCATTGATACAAAGAATGGCACTGACGGTAATGGTACAGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTGACTGTCGCTGACATTACCACGGGTGCGGCAGACGTTAATGCGGCAACCTTACAATCAAGTAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACCTTTGATGATAAAACGAAAAACGAAGGTGCGAAATTATCTGATTTAGAAGCAAATAATGCTGTTAAAGGTGAAAGTAAAATCACGGTAAACGGTGCTGAATATACAGCTAACGCTGAGGGTGATAAAATTACCTTAGCAGGTAAAACCATGTTTATTGATAAGACAGCCTCTGGCGTTAGCACATTAATTAATGAAGATGCTGCTGCAGCTAAGAAGAGTACCGCTAATCCACTCGCTTCAATTGATTCTGCATTGTCAAAAGTGGATGCTGTACGTTCTTCATTGGGGGCTATTCAGAACCGTTTTGATTCTGCCATTACCAACTTGGGTAATACGGTAAATAATCTGACTTCCGCACGTAGCCGTATCGAAGATGCTGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCTGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4709 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAA-GAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAG-TGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGC-ACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4710 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| || |||||||| || || |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| || || |||||||| |||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||| || ||||||||||| || || |||||||| ||||| |||||||||||||||||||| ||||| || ||||||||||| || |||||||| ||| |||| || | |||| ||| ||||||| | ||||| || ||||| ||||| || || ||||| | ||||| |||| |||||||||||||||||||| || || ||||||||||||||| | |||| |||| | || ||||| |||||||||||| | | |||||||| ||||| |||| ||||| || ||| | ||||| ||||| || ||||| | || ||||| | |||| | || || || |||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | ||||| || | ||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| | |||||||| |||||||| ||||||||||| || ||||||||||| || ||||| || ||||||||||| |||||||| | ||||||||| | |||||||| || |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||| ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || || |||||||| ||||||| ||||| |||||||||||||| |||||||||||| | || |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| || ||||| || || |||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4711 </Hsp>
|
jpayne@1
|
4712 </Hit_hsps>
|
jpayne@1
|
4713 </Hit>
|
jpayne@1
|
4714 </Iteration_hits>
|
jpayne@1
|
4715 <Iteration_stat>
|
jpayne@1
|
4716 <Statistics>
|
jpayne@1
|
4717 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4718 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4719 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4720 <Statistics_eff-space>81879912</Statistics_eff-space>
|
jpayne@1
|
4721 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4722 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4723 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4724 </Statistics>
|
jpayne@1
|
4725 </Iteration_stat>
|
jpayne@1
|
4726 </Iteration>
|
jpayne@1
|
4727 <Iteration>
|
jpayne@1
|
4728 <Iteration_iter-num>120</Iteration_iter-num>
|
jpayne@1
|
4729 <Iteration_query-ID>Query_120</Iteration_query-ID>
|
jpayne@1
|
4730 <Iteration_query-def>fliC_g,z62_Salmonella.enterica_II.9,46:g,z62:-_AY353415_g,m__1515</Iteration_query-def>
|
jpayne@1
|
4731 <Iteration_query-len>1515</Iteration_query-len>
|
jpayne@1
|
4732 <Iteration_hits>
|
jpayne@1
|
4733 <Hit>
|
jpayne@1
|
4734 <Hit_num>1</Hit_num>
|
jpayne@1
|
4735 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4736 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4737 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4738 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4739 <Hit_hsps>
|
jpayne@1
|
4740 <Hsp>
|
jpayne@1
|
4741 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4742 <Hsp_bit-score>2468.24</Hsp_bit-score>
|
jpayne@1
|
4743 <Hsp_score>1336</Hsp_score>
|
jpayne@1
|
4744 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4745 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4746 <Hsp_query-to>1515</Hsp_query-to>
|
jpayne@1
|
4747 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4748 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4749 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4750 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4751 <Hsp_identity>1458</Hsp_identity>
|
jpayne@1
|
4752 <Hsp_positive>1458</Hsp_positive>
|
jpayne@1
|
4753 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
4754 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4755 <Hsp_qseq>ATGGCACAAGTCATTAACACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCTCAGTCCTCACTGAGTTCCGCTATCGAGCGTCTGTCCTCTGGTCTGCGTATCAATAGTGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAGTTCAACGGCGTTAAAGTCCTGTCACAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGATTCAATGTTAACGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGTTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTGCTGCTGGTACCGCTGACGCCAAAGCGATAGCTAATGTCATTAAGGGTGGTAAAGAGGGAGATACCTTTGATTATAAAGGCGTATCTTTTACTATTGATACAAAAACTGGTAATGATGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGGTGGTG--GT-AGTGTTAATGATGCTACCTTACAATCAAGCAGAAATGTTTATACATCTGCAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAATGAGAGTGCGAAACTTTCTGATTTGGAAGCAAATAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGATCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAATCCACTGGCTGCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCCGGTACCTCTGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4756 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4757 <Hsp_midline>||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| ||||||||| |||||||||||| ||| ||||| |||||||||| || ||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4758 </Hsp>
|
jpayne@1
|
4759 </Hit_hsps>
|
jpayne@1
|
4760 </Hit>
|
jpayne@1
|
4761 </Iteration_hits>
|
jpayne@1
|
4762 <Iteration_stat>
|
jpayne@1
|
4763 <Statistics>
|
jpayne@1
|
4764 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4765 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4766 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4767 <Statistics_eff-space>81879912</Statistics_eff-space>
|
jpayne@1
|
4768 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4769 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4770 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4771 </Statistics>
|
jpayne@1
|
4772 </Iteration_stat>
|
jpayne@1
|
4773 </Iteration>
|
jpayne@1
|
4774 <Iteration>
|
jpayne@1
|
4775 <Iteration_iter-num>121</Iteration_iter-num>
|
jpayne@1
|
4776 <Iteration_query-ID>Query_121</Iteration_query-ID>
|
jpayne@1
|
4777 <Iteration_query-def>fliC_g,z62_Salmonella.enterica_II.50:g,z62:e,n,x_AY353416_g,m__1515</Iteration_query-def>
|
jpayne@1
|
4778 <Iteration_query-len>1515</Iteration_query-len>
|
jpayne@1
|
4779 <Iteration_hits>
|
jpayne@1
|
4780 <Hit>
|
jpayne@1
|
4781 <Hit_num>1</Hit_num>
|
jpayne@1
|
4782 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4783 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4784 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4785 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4786 <Hit_hsps>
|
jpayne@1
|
4787 <Hsp>
|
jpayne@1
|
4788 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4789 <Hsp_bit-score>2462.7</Hsp_bit-score>
|
jpayne@1
|
4790 <Hsp_score>1333</Hsp_score>
|
jpayne@1
|
4791 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
4792 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4793 <Hsp_query-to>1515</Hsp_query-to>
|
jpayne@1
|
4794 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4795 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4796 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4797 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4798 <Hsp_identity>1457</Hsp_identity>
|
jpayne@1
|
4799 <Hsp_positive>1457</Hsp_positive>
|
jpayne@1
|
4800 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
4801 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
4802 <Hsp_qseq>ATGGCACAAGTCATTAACACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCTCAGTCCTCACTGAGTTCCGCTATCGAGCGTCTGTCCTCTGGTCTGCGTATCAATAGTGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAGTTCAACGGCGTTAAAGTCCTGTCACAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGATTCAATGTTAACGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGTTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTGCTGCTGGTACCGCTGACGCCAAAGCGATAGCTAATGTCATTAAGGGTGGTAAAGAGGGAGATACCTTTGATTATAAAGGCGTATCTTTTACTATTGATACAAAAACTGGTAATGATGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGGTGGTG--GT-AGTGTTAATGATGCTACCTTACAATCAAGCAGAAATGTTTATACATCTGCAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAATGAGAGTGCGAAACTTTCTGATTTGGAAGCAAATAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGATCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAATCCACTGGCTGCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCGCTGGGGGCAATTCAGAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4803 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4804 <Hsp_midline>||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| ||||||||| |||||||||||| ||| ||||| |||||||||| || ||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | | |||||||||||| |||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4805 </Hsp>
|
jpayne@1
|
4806 </Hit_hsps>
|
jpayne@1
|
4807 </Hit>
|
jpayne@1
|
4808 </Iteration_hits>
|
jpayne@1
|
4809 <Iteration_stat>
|
jpayne@1
|
4810 <Statistics>
|
jpayne@1
|
4811 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4812 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4813 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4814 <Statistics_eff-space>81879912</Statistics_eff-space>
|
jpayne@1
|
4815 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4816 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4817 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4818 </Statistics>
|
jpayne@1
|
4819 </Iteration_stat>
|
jpayne@1
|
4820 </Iteration>
|
jpayne@1
|
4821 <Iteration>
|
jpayne@1
|
4822 <Iteration_iter-num>122</Iteration_iter-num>
|
jpayne@1
|
4823 <Iteration_query-ID>Query_122</Iteration_query-ID>
|
jpayne@1
|
4824 <Iteration_query-def>fliC_i_Salmonella.enterica_IIIb.61:i:z_AY353417_r,i__1488</Iteration_query-def>
|
jpayne@1
|
4825 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
4826 <Iteration_hits>
|
jpayne@1
|
4827 <Hit>
|
jpayne@1
|
4828 <Hit_num>1</Hit_num>
|
jpayne@1
|
4829 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4830 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4831 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4832 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4833 <Hit_hsps>
|
jpayne@1
|
4834 <Hsp>
|
jpayne@1
|
4835 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4836 <Hsp_bit-score>494.176</Hsp_bit-score>
|
jpayne@1
|
4837 <Hsp_score>267</Hsp_score>
|
jpayne@1
|
4838 <Hsp_evalue>1.39171e-141</Hsp_evalue>
|
jpayne@1
|
4839 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4840 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
4841 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4842 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
4843 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4844 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4845 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
4846 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
4847 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4848 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
4849 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATAACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
4850 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
4851 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
4852 </Hsp>
|
jpayne@1
|
4853 <Hsp>
|
jpayne@1
|
4854 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
4855 <Hsp_bit-score>230.105</Hsp_bit-score>
|
jpayne@1
|
4856 <Hsp_score>124</Hsp_score>
|
jpayne@1
|
4857 <Hsp_evalue>4.33322e-62</Hsp_evalue>
|
jpayne@1
|
4858 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
4859 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
4860 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
4861 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4862 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4863 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4864 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
4865 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
4866 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
4867 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
4868 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCTAACATGTCTCGTGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4869 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4870 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| ||||| |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4871 </Hsp>
|
jpayne@1
|
4872 </Hit_hsps>
|
jpayne@1
|
4873 </Hit>
|
jpayne@1
|
4874 </Iteration_hits>
|
jpayne@1
|
4875 <Iteration_stat>
|
jpayne@1
|
4876 <Statistics>
|
jpayne@1
|
4877 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4878 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4879 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4880 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
4881 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4882 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4883 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4884 </Statistics>
|
jpayne@1
|
4885 </Iteration_stat>
|
jpayne@1
|
4886 </Iteration>
|
jpayne@1
|
4887 <Iteration>
|
jpayne@1
|
4888 <Iteration_iter-num>123</Iteration_iter-num>
|
jpayne@1
|
4889 <Iteration_query-ID>Query_123</Iteration_query-ID>
|
jpayne@1
|
4890 <Iteration_query-def>fliC_i_Salmonella.enterica_Augustenborg_AY353418_r,i__1488</Iteration_query-def>
|
jpayne@1
|
4891 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
4892 <Iteration_hits>
|
jpayne@1
|
4893 <Hit>
|
jpayne@1
|
4894 <Hit_num>1</Hit_num>
|
jpayne@1
|
4895 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4896 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4897 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4898 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4899 <Hit_hsps>
|
jpayne@1
|
4900 <Hsp>
|
jpayne@1
|
4901 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4902 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
4903 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
4904 <Hsp_evalue>6.42935e-145</Hsp_evalue>
|
jpayne@1
|
4905 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4906 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
4907 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4908 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
4909 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4910 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4911 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
4912 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
4913 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
4914 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
4915 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
4916 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
4917 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
4918 </Hsp>
|
jpayne@1
|
4919 <Hsp>
|
jpayne@1
|
4920 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
4921 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
4922 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
4923 <Hsp_evalue>9.31365e-64</Hsp_evalue>
|
jpayne@1
|
4924 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
4925 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
4926 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
4927 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4928 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4929 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4930 <Hsp_identity>214</Hsp_identity>
|
jpayne@1
|
4931 <Hsp_positive>214</Hsp_positive>
|
jpayne@1
|
4932 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
4933 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
4934 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCTCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
4935 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
4936 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
4937 </Hsp>
|
jpayne@1
|
4938 </Hit_hsps>
|
jpayne@1
|
4939 </Hit>
|
jpayne@1
|
4940 </Iteration_hits>
|
jpayne@1
|
4941 <Iteration_stat>
|
jpayne@1
|
4942 <Statistics>
|
jpayne@1
|
4943 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
4944 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
4945 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
4946 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
4947 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
4948 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
4949 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
4950 </Statistics>
|
jpayne@1
|
4951 </Iteration_stat>
|
jpayne@1
|
4952 </Iteration>
|
jpayne@1
|
4953 <Iteration>
|
jpayne@1
|
4954 <Iteration_iter-num>124</Iteration_iter-num>
|
jpayne@1
|
4955 <Iteration_query-ID>Query_124</Iteration_query-ID>
|
jpayne@1
|
4956 <Iteration_query-def>fliC_i_Salmonella.enterica_IIIb.48:i:z_AY353419_r,i__1488</Iteration_query-def>
|
jpayne@1
|
4957 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
4958 <Iteration_hits>
|
jpayne@1
|
4959 <Hit>
|
jpayne@1
|
4960 <Hit_num>1</Hit_num>
|
jpayne@1
|
4961 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
4962 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
4963 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
4964 <Hit_len>1962</Hit_len>
|
jpayne@1
|
4965 <Hit_hsps>
|
jpayne@1
|
4966 <Hsp>
|
jpayne@1
|
4967 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
4968 <Hsp_bit-score>494.176</Hsp_bit-score>
|
jpayne@1
|
4969 <Hsp_score>267</Hsp_score>
|
jpayne@1
|
4970 <Hsp_evalue>1.39171e-141</Hsp_evalue>
|
jpayne@1
|
4971 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
4972 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
4973 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
4974 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
4975 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4976 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4977 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
4978 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
4979 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
4980 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
4981 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATAACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
4982 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
4983 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
4984 </Hsp>
|
jpayne@1
|
4985 <Hsp>
|
jpayne@1
|
4986 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
4987 <Hsp_bit-score>230.105</Hsp_bit-score>
|
jpayne@1
|
4988 <Hsp_score>124</Hsp_score>
|
jpayne@1
|
4989 <Hsp_evalue>4.33322e-62</Hsp_evalue>
|
jpayne@1
|
4990 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
4991 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
4992 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
4993 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
4994 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
4995 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
4996 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
4997 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
4998 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
4999 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5000 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCTAACATGTCTCGTGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5001 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5002 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| ||||| |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5003 </Hsp>
|
jpayne@1
|
5004 </Hit_hsps>
|
jpayne@1
|
5005 </Hit>
|
jpayne@1
|
5006 </Iteration_hits>
|
jpayne@1
|
5007 <Iteration_stat>
|
jpayne@1
|
5008 <Statistics>
|
jpayne@1
|
5009 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5010 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5011 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5012 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5013 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5014 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5015 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5016 </Statistics>
|
jpayne@1
|
5017 </Iteration_stat>
|
jpayne@1
|
5018 </Iteration>
|
jpayne@1
|
5019 <Iteration>
|
jpayne@1
|
5020 <Iteration_iter-num>125</Iteration_iter-num>
|
jpayne@1
|
5021 <Iteration_query-ID>Query_125</Iteration_query-ID>
|
jpayne@1
|
5022 <Iteration_query-def>fliC_i_Salmonella.enterica_Typhimurium_AY353420_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5023 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5024 <Iteration_hits>
|
jpayne@1
|
5025 <Hit>
|
jpayne@1
|
5026 <Hit_num>1</Hit_num>
|
jpayne@1
|
5027 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5028 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5029 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5030 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5031 <Hit_hsps>
|
jpayne@1
|
5032 <Hsp>
|
jpayne@1
|
5033 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5034 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
5035 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
5036 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
5037 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5038 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5039 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5040 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5041 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5042 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5043 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
5044 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
5045 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5046 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5047 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5048 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5049 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
5050 </Hsp>
|
jpayne@1
|
5051 <Hsp>
|
jpayne@1
|
5052 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5053 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
5054 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
5055 <Hsp_evalue>2.00184e-65</Hsp_evalue>
|
jpayne@1
|
5056 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5057 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5058 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5059 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5060 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5061 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5062 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
5063 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
5064 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5065 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5066 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5067 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5068 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5069 </Hsp>
|
jpayne@1
|
5070 </Hit_hsps>
|
jpayne@1
|
5071 </Hit>
|
jpayne@1
|
5072 </Iteration_hits>
|
jpayne@1
|
5073 <Iteration_stat>
|
jpayne@1
|
5074 <Statistics>
|
jpayne@1
|
5075 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5076 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5077 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5078 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5079 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5080 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5081 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5082 </Statistics>
|
jpayne@1
|
5083 </Iteration_stat>
|
jpayne@1
|
5084 </Iteration>
|
jpayne@1
|
5085 <Iteration>
|
jpayne@1
|
5086 <Iteration_iter-num>126</Iteration_iter-num>
|
jpayne@1
|
5087 <Iteration_query-ID>Query_126</Iteration_query-ID>
|
jpayne@1
|
5088 <Iteration_query-def>fliC_i_Salmonella.enterica_Bandia_AY353421_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5089 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5090 <Iteration_hits>
|
jpayne@1
|
5091 <Hit>
|
jpayne@1
|
5092 <Hit_num>1</Hit_num>
|
jpayne@1
|
5093 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5094 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5095 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5096 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5097 <Hit_hsps>
|
jpayne@1
|
5098 <Hsp>
|
jpayne@1
|
5099 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5100 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
5101 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
5102 <Hsp_evalue>3.01252e-138</Hsp_evalue>
|
jpayne@1
|
5103 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5104 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5105 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5106 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5107 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5108 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5109 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
5110 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
5111 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5112 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5113 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5114 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5115 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
5116 </Hsp>
|
jpayne@1
|
5117 <Hsp>
|
jpayne@1
|
5118 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5119 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
5120 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
5121 <Hsp_evalue>9.31365e-64</Hsp_evalue>
|
jpayne@1
|
5122 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5123 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5124 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5125 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5126 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5127 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5128 <Hsp_identity>214</Hsp_identity>
|
jpayne@1
|
5129 <Hsp_positive>214</Hsp_positive>
|
jpayne@1
|
5130 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5131 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5132 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGATAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5133 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5134 <Hsp_midline>||||||| |||| ||| || | || || | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5135 </Hsp>
|
jpayne@1
|
5136 </Hit_hsps>
|
jpayne@1
|
5137 </Hit>
|
jpayne@1
|
5138 </Iteration_hits>
|
jpayne@1
|
5139 <Iteration_stat>
|
jpayne@1
|
5140 <Statistics>
|
jpayne@1
|
5141 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5142 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5143 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5144 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5145 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5146 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5147 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5148 </Statistics>
|
jpayne@1
|
5149 </Iteration_stat>
|
jpayne@1
|
5150 </Iteration>
|
jpayne@1
|
5151 <Iteration>
|
jpayne@1
|
5152 <Iteration_iter-num>127</Iteration_iter-num>
|
jpayne@1
|
5153 <Iteration_query-ID>Query_127</Iteration_query-ID>
|
jpayne@1
|
5154 <Iteration_query-def>fliC_i_Salmonella.enterica_Idikan_AY353422_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5155 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5156 <Iteration_hits>
|
jpayne@1
|
5157 <Hit>
|
jpayne@1
|
5158 <Hit_num>1</Hit_num>
|
jpayne@1
|
5159 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5160 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5161 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5162 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5163 <Hit_hsps>
|
jpayne@1
|
5164 <Hsp>
|
jpayne@1
|
5165 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5166 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
5167 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
5168 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
5169 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5170 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5171 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5172 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5173 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5174 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5175 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
5176 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
5177 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5178 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5179 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5180 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5181 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
5182 </Hsp>
|
jpayne@1
|
5183 <Hsp>
|
jpayne@1
|
5184 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5185 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
5186 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
5187 <Hsp_evalue>2.00184e-65</Hsp_evalue>
|
jpayne@1
|
5188 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5189 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5190 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5191 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5192 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5193 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5194 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
5195 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
5196 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5197 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5198 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5199 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5200 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5201 </Hsp>
|
jpayne@1
|
5202 </Hit_hsps>
|
jpayne@1
|
5203 </Hit>
|
jpayne@1
|
5204 </Iteration_hits>
|
jpayne@1
|
5205 <Iteration_stat>
|
jpayne@1
|
5206 <Statistics>
|
jpayne@1
|
5207 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5208 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5209 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5210 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5211 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5212 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5213 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5214 </Statistics>
|
jpayne@1
|
5215 </Iteration_stat>
|
jpayne@1
|
5216 </Iteration>
|
jpayne@1
|
5217 <Iteration>
|
jpayne@1
|
5218 <Iteration_iter-num>128</Iteration_iter-num>
|
jpayne@1
|
5219 <Iteration_query-ID>Query_128</Iteration_query-ID>
|
jpayne@1
|
5220 <Iteration_query-def>fliC_i_Salmonella.enterica_Typhimurium_AY353423_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5221 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5222 <Iteration_hits>
|
jpayne@1
|
5223 <Hit>
|
jpayne@1
|
5224 <Hit_num>1</Hit_num>
|
jpayne@1
|
5225 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5226 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5227 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5228 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5229 <Hit_hsps>
|
jpayne@1
|
5230 <Hsp>
|
jpayne@1
|
5231 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5232 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
5233 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
5234 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
5235 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5236 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5237 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5238 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5239 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5240 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5241 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
5242 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
5243 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5244 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5245 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5246 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5247 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
5248 </Hsp>
|
jpayne@1
|
5249 <Hsp>
|
jpayne@1
|
5250 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5251 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
5252 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
5253 <Hsp_evalue>2.00184e-65</Hsp_evalue>
|
jpayne@1
|
5254 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5255 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5256 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5257 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5258 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5259 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5260 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
5261 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
5262 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5263 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5264 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5265 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5266 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5267 </Hsp>
|
jpayne@1
|
5268 </Hit_hsps>
|
jpayne@1
|
5269 </Hit>
|
jpayne@1
|
5270 </Iteration_hits>
|
jpayne@1
|
5271 <Iteration_stat>
|
jpayne@1
|
5272 <Statistics>
|
jpayne@1
|
5273 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5274 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5275 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5276 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5277 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5278 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5279 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5280 </Statistics>
|
jpayne@1
|
5281 </Iteration_stat>
|
jpayne@1
|
5282 </Iteration>
|
jpayne@1
|
5283 <Iteration>
|
jpayne@1
|
5284 <Iteration_iter-num>129</Iteration_iter-num>
|
jpayne@1
|
5285 <Iteration_query-ID>Query_129</Iteration_query-ID>
|
jpayne@1
|
5286 <Iteration_query-def>fliC_i_Salmonella.enterica_Typhimurium_AY353424_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5287 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5288 <Iteration_hits>
|
jpayne@1
|
5289 <Hit>
|
jpayne@1
|
5290 <Hit_num>1</Hit_num>
|
jpayne@1
|
5291 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5292 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5293 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5294 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5295 <Hit_hsps>
|
jpayne@1
|
5296 <Hsp>
|
jpayne@1
|
5297 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5298 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
5299 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
5300 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
5301 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5302 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5303 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5304 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5305 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5306 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5307 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
5308 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
5309 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5310 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5311 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5312 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5313 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
5314 </Hsp>
|
jpayne@1
|
5315 <Hsp>
|
jpayne@1
|
5316 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5317 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
5318 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
5319 <Hsp_evalue>2.00184e-65</Hsp_evalue>
|
jpayne@1
|
5320 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5321 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5322 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5323 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5324 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5325 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5326 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
5327 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
5328 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5329 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5330 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5331 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5332 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5333 </Hsp>
|
jpayne@1
|
5334 </Hit_hsps>
|
jpayne@1
|
5335 </Hit>
|
jpayne@1
|
5336 </Iteration_hits>
|
jpayne@1
|
5337 <Iteration_stat>
|
jpayne@1
|
5338 <Statistics>
|
jpayne@1
|
5339 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5340 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5341 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5342 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5343 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5344 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5345 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5346 </Statistics>
|
jpayne@1
|
5347 </Iteration_stat>
|
jpayne@1
|
5348 </Iteration>
|
jpayne@1
|
5349 <Iteration>
|
jpayne@1
|
5350 <Iteration_iter-num>130</Iteration_iter-num>
|
jpayne@1
|
5351 <Iteration_query-ID>Query_130</Iteration_query-ID>
|
jpayne@1
|
5352 <Iteration_query-def>fliC_i_Salmonella.enterica_II.4,12,27:i:z35_AY353425_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5353 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5354 <Iteration_hits>
|
jpayne@1
|
5355 <Hit>
|
jpayne@1
|
5356 <Hit_num>1</Hit_num>
|
jpayne@1
|
5357 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5358 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5359 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5360 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5361 <Hit_hsps>
|
jpayne@1
|
5362 <Hsp>
|
jpayne@1
|
5363 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5364 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
5365 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
5366 <Hsp_evalue>6.47499e-140</Hsp_evalue>
|
jpayne@1
|
5367 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5368 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5369 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5370 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5371 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5372 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5373 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
5374 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
5375 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5376 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5377 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAATGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5378 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5379 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
5380 </Hsp>
|
jpayne@1
|
5381 <Hsp>
|
jpayne@1
|
5382 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5383 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
5384 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
5385 <Hsp_evalue>9.31365e-64</Hsp_evalue>
|
jpayne@1
|
5386 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5387 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5388 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5389 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5390 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5391 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5392 <Hsp_identity>214</Hsp_identity>
|
jpayne@1
|
5393 <Hsp_positive>214</Hsp_positive>
|
jpayne@1
|
5394 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5395 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5396 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAAAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACTGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5397 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5398 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | ||||||||||| | || || || |||||||| |||||||| |||| ||| |||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5399 </Hsp>
|
jpayne@1
|
5400 </Hit_hsps>
|
jpayne@1
|
5401 </Hit>
|
jpayne@1
|
5402 </Iteration_hits>
|
jpayne@1
|
5403 <Iteration_stat>
|
jpayne@1
|
5404 <Statistics>
|
jpayne@1
|
5405 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5406 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5407 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5408 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5409 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5410 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5411 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5412 </Statistics>
|
jpayne@1
|
5413 </Iteration_stat>
|
jpayne@1
|
5414 </Iteration>
|
jpayne@1
|
5415 <Iteration>
|
jpayne@1
|
5416 <Iteration_iter-num>131</Iteration_iter-num>
|
jpayne@1
|
5417 <Iteration_query-ID>Query_131</Iteration_query-ID>
|
jpayne@1
|
5418 <Iteration_query-def>fliC_i_Salmonella.enterica_Augustenborg_AY353426_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5419 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5420 <Iteration_hits>
|
jpayne@1
|
5421 <Hit>
|
jpayne@1
|
5422 <Hit_num>1</Hit_num>
|
jpayne@1
|
5423 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5424 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5425 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5426 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5427 <Hit_hsps>
|
jpayne@1
|
5428 <Hsp>
|
jpayne@1
|
5429 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5430 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
5431 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
5432 <Hsp_evalue>6.42935e-145</Hsp_evalue>
|
jpayne@1
|
5433 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5434 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5435 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5436 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5437 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5438 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5439 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
5440 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
5441 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5442 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5443 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5444 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5445 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
5446 </Hsp>
|
jpayne@1
|
5447 <Hsp>
|
jpayne@1
|
5448 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5449 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
5450 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
5451 <Hsp_evalue>9.31365e-64</Hsp_evalue>
|
jpayne@1
|
5452 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5453 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5454 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5455 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5456 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5457 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5458 <Hsp_identity>214</Hsp_identity>
|
jpayne@1
|
5459 <Hsp_positive>214</Hsp_positive>
|
jpayne@1
|
5460 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5461 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5462 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCTCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5463 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5464 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5465 </Hsp>
|
jpayne@1
|
5466 </Hit_hsps>
|
jpayne@1
|
5467 </Hit>
|
jpayne@1
|
5468 </Iteration_hits>
|
jpayne@1
|
5469 <Iteration_stat>
|
jpayne@1
|
5470 <Statistics>
|
jpayne@1
|
5471 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5472 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5473 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5474 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5475 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5476 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5477 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5478 </Statistics>
|
jpayne@1
|
5479 </Iteration_stat>
|
jpayne@1
|
5480 </Iteration>
|
jpayne@1
|
5481 <Iteration>
|
jpayne@1
|
5482 <Iteration_iter-num>132</Iteration_iter-num>
|
jpayne@1
|
5483 <Iteration_query-ID>Query_132</Iteration_query-ID>
|
jpayne@1
|
5484 <Iteration_query-def>fliC_i_Salmonella.enterica_Kentucky_AY353427_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5485 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5486 <Iteration_hits>
|
jpayne@1
|
5487 <Hit>
|
jpayne@1
|
5488 <Hit_num>1</Hit_num>
|
jpayne@1
|
5489 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5490 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5491 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5492 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5493 <Hit_hsps>
|
jpayne@1
|
5494 <Hsp>
|
jpayne@1
|
5495 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5496 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
5497 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
5498 <Hsp_evalue>3.03391e-133</Hsp_evalue>
|
jpayne@1
|
5499 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5500 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5501 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5502 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5503 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5504 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5505 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
5506 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
5507 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5508 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5509 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5510 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5511 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
5512 </Hsp>
|
jpayne@1
|
5513 <Hsp>
|
jpayne@1
|
5514 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5515 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
5516 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
5517 <Hsp_evalue>2.00184e-65</Hsp_evalue>
|
jpayne@1
|
5518 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5519 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5520 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5521 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5522 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5523 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5524 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
5525 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
5526 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5527 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5528 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5529 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5530 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5531 </Hsp>
|
jpayne@1
|
5532 </Hit_hsps>
|
jpayne@1
|
5533 </Hit>
|
jpayne@1
|
5534 </Iteration_hits>
|
jpayne@1
|
5535 <Iteration_stat>
|
jpayne@1
|
5536 <Statistics>
|
jpayne@1
|
5537 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5538 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5539 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5540 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5541 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5542 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5543 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5544 </Statistics>
|
jpayne@1
|
5545 </Iteration_stat>
|
jpayne@1
|
5546 </Iteration>
|
jpayne@1
|
5547 <Iteration>
|
jpayne@1
|
5548 <Iteration_iter-num>133</Iteration_iter-num>
|
jpayne@1
|
5549 <Iteration_query-ID>Query_133</Iteration_query-ID>
|
jpayne@1
|
5550 <Iteration_query-def>fliC_i_Salmonella.enterica_Lindenburg_AY353428_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5551 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5552 <Iteration_hits>
|
jpayne@1
|
5553 <Hit>
|
jpayne@1
|
5554 <Hit_num>1</Hit_num>
|
jpayne@1
|
5555 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5556 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5557 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5558 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5559 <Hit_hsps>
|
jpayne@1
|
5560 <Hsp>
|
jpayne@1
|
5561 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5562 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
5563 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
5564 <Hsp_evalue>1.40159e-136</Hsp_evalue>
|
jpayne@1
|
5565 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5566 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5567 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5568 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5569 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5570 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5571 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
5572 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
5573 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5574 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5575 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTTTCTGGCCAGACCCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5576 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5577 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || |||||| ||||| || || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
5578 </Hsp>
|
jpayne@1
|
5579 <Hsp>
|
jpayne@1
|
5580 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5581 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
5582 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
5583 <Hsp_evalue>2.00184e-65</Hsp_evalue>
|
jpayne@1
|
5584 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5585 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5586 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5587 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5588 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5589 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5590 <Hsp_identity>216</Hsp_identity>
|
jpayne@1
|
5591 <Hsp_positive>216</Hsp_positive>
|
jpayne@1
|
5592 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
5593 <Hsp_align-len>258</Hsp_align-len>
|
jpayne@1
|
5594 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACT-TGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5595 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCT-TCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5596 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| || |||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5597 </Hsp>
|
jpayne@1
|
5598 </Hit_hsps>
|
jpayne@1
|
5599 </Hit>
|
jpayne@1
|
5600 </Iteration_hits>
|
jpayne@1
|
5601 <Iteration_stat>
|
jpayne@1
|
5602 <Statistics>
|
jpayne@1
|
5603 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5604 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5605 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5606 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5607 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5608 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5609 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5610 </Statistics>
|
jpayne@1
|
5611 </Iteration_stat>
|
jpayne@1
|
5612 </Iteration>
|
jpayne@1
|
5613 <Iteration>
|
jpayne@1
|
5614 <Iteration_iter-num>134</Iteration_iter-num>
|
jpayne@1
|
5615 <Iteration_query-ID>Query_134</Iteration_query-ID>
|
jpayne@1
|
5616 <Iteration_query-def>fliC_i_Salmonella.enterica_Gloucester_AY353429_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5617 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5618 <Iteration_hits>
|
jpayne@1
|
5619 <Hit>
|
jpayne@1
|
5620 <Hit_num>1</Hit_num>
|
jpayne@1
|
5621 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5622 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5623 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5624 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5625 <Hit_hsps>
|
jpayne@1
|
5626 <Hsp>
|
jpayne@1
|
5627 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5628 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
5629 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
5630 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
5631 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5632 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5633 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5634 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5635 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5636 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5637 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
5638 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
5639 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5640 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5641 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5642 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5643 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
5644 </Hsp>
|
jpayne@1
|
5645 <Hsp>
|
jpayne@1
|
5646 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5647 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
5648 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
5649 <Hsp_evalue>9.31365e-64</Hsp_evalue>
|
jpayne@1
|
5650 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5651 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5652 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5653 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5654 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5655 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5656 <Hsp_identity>214</Hsp_identity>
|
jpayne@1
|
5657 <Hsp_positive>214</Hsp_positive>
|
jpayne@1
|
5658 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5659 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5660 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5661 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5662 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5663 </Hsp>
|
jpayne@1
|
5664 </Hit_hsps>
|
jpayne@1
|
5665 </Hit>
|
jpayne@1
|
5666 </Iteration_hits>
|
jpayne@1
|
5667 <Iteration_stat>
|
jpayne@1
|
5668 <Statistics>
|
jpayne@1
|
5669 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5670 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5671 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5672 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5673 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5674 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5675 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5676 </Statistics>
|
jpayne@1
|
5677 </Iteration_stat>
|
jpayne@1
|
5678 </Iteration>
|
jpayne@1
|
5679 <Iteration>
|
jpayne@1
|
5680 <Iteration_iter-num>135</Iteration_iter-num>
|
jpayne@1
|
5681 <Iteration_query-ID>Query_135</Iteration_query-ID>
|
jpayne@1
|
5682 <Iteration_query-def>fliC_i_Salmonella.enterica_Agama_AY353430_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5683 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5684 <Iteration_hits>
|
jpayne@1
|
5685 <Hit>
|
jpayne@1
|
5686 <Hit_num>1</Hit_num>
|
jpayne@1
|
5687 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5688 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5689 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5690 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5691 <Hit_hsps>
|
jpayne@1
|
5692 <Hsp>
|
jpayne@1
|
5693 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5694 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
5695 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
5696 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
5697 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5698 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5699 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5700 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5701 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5702 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5703 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
5704 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
5705 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5706 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5707 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5708 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5709 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
5710 </Hsp>
|
jpayne@1
|
5711 <Hsp>
|
jpayne@1
|
5712 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5713 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
5714 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
5715 <Hsp_evalue>9.31365e-64</Hsp_evalue>
|
jpayne@1
|
5716 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5717 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5718 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5719 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5720 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5721 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5722 <Hsp_identity>214</Hsp_identity>
|
jpayne@1
|
5723 <Hsp_positive>214</Hsp_positive>
|
jpayne@1
|
5724 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5725 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5726 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5727 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5728 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5729 </Hsp>
|
jpayne@1
|
5730 </Hit_hsps>
|
jpayne@1
|
5731 </Hit>
|
jpayne@1
|
5732 </Iteration_hits>
|
jpayne@1
|
5733 <Iteration_stat>
|
jpayne@1
|
5734 <Statistics>
|
jpayne@1
|
5735 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5736 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5737 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5738 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5739 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5740 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5741 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5742 </Statistics>
|
jpayne@1
|
5743 </Iteration_stat>
|
jpayne@1
|
5744 </Iteration>
|
jpayne@1
|
5745 <Iteration>
|
jpayne@1
|
5746 <Iteration_iter-num>136</Iteration_iter-num>
|
jpayne@1
|
5747 <Iteration_query-ID>Query_136</Iteration_query-ID>
|
jpayne@1
|
5748 <Iteration_query-def>fliC_i_Salmonella.enterica_IIIb.21:i:e,n,x,z15_AY353431_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5749 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5750 <Iteration_hits>
|
jpayne@1
|
5751 <Hit>
|
jpayne@1
|
5752 <Hit_num>1</Hit_num>
|
jpayne@1
|
5753 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5754 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5755 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5756 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5757 <Hit_hsps>
|
jpayne@1
|
5758 <Hsp>
|
jpayne@1
|
5759 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5760 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
5761 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
5762 <Hsp_evalue>2.99128e-143</Hsp_evalue>
|
jpayne@1
|
5763 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5764 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5765 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5766 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5767 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5768 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5769 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
5770 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
5771 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5772 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5773 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5774 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5775 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
5776 </Hsp>
|
jpayne@1
|
5777 <Hsp>
|
jpayne@1
|
5778 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5779 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
5780 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
5781 <Hsp_evalue>2.01605e-60</Hsp_evalue>
|
jpayne@1
|
5782 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5783 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5784 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5785 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5786 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5787 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5788 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
5789 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
5790 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5791 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5792 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCTAACATGTCTCGTGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5793 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5794 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| ||||| |||||| |||||||||||||||||||| || |||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5795 </Hsp>
|
jpayne@1
|
5796 </Hit_hsps>
|
jpayne@1
|
5797 </Hit>
|
jpayne@1
|
5798 </Iteration_hits>
|
jpayne@1
|
5799 <Iteration_stat>
|
jpayne@1
|
5800 <Statistics>
|
jpayne@1
|
5801 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5802 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5803 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5804 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5805 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5806 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5807 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5808 </Statistics>
|
jpayne@1
|
5809 </Iteration_stat>
|
jpayne@1
|
5810 </Iteration>
|
jpayne@1
|
5811 <Iteration>
|
jpayne@1
|
5812 <Iteration_iter-num>137</Iteration_iter-num>
|
jpayne@1
|
5813 <Iteration_query-ID>Query_137</Iteration_query-ID>
|
jpayne@1
|
5814 <Iteration_query-def>fliC_i_Salmonella.enterica_IIIb.57:i:e,n,x,z15_AY353432_r,i__1488</Iteration_query-def>
|
jpayne@1
|
5815 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
5816 <Iteration_hits>
|
jpayne@1
|
5817 <Hit>
|
jpayne@1
|
5818 <Hit_num>1</Hit_num>
|
jpayne@1
|
5819 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5820 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5821 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5822 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5823 <Hit_hsps>
|
jpayne@1
|
5824 <Hsp>
|
jpayne@1
|
5825 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5826 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
5827 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
5828 <Hsp_evalue>2.99128e-143</Hsp_evalue>
|
jpayne@1
|
5829 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5830 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
5831 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5832 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
5833 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5834 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5835 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
5836 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
5837 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5838 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
5839 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
5840 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
5841 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
5842 </Hsp>
|
jpayne@1
|
5843 <Hsp>
|
jpayne@1
|
5844 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5845 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
5846 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
5847 <Hsp_evalue>2.01605e-60</Hsp_evalue>
|
jpayne@1
|
5848 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
5849 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
5850 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5851 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5852 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5853 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5854 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
5855 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
5856 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5857 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
5858 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5859 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5860 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5861 </Hsp>
|
jpayne@1
|
5862 </Hit_hsps>
|
jpayne@1
|
5863 </Hit>
|
jpayne@1
|
5864 </Iteration_hits>
|
jpayne@1
|
5865 <Iteration_stat>
|
jpayne@1
|
5866 <Statistics>
|
jpayne@1
|
5867 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5868 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5869 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5870 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
5871 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5872 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5873 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5874 </Statistics>
|
jpayne@1
|
5875 </Iteration_stat>
|
jpayne@1
|
5876 </Iteration>
|
jpayne@1
|
5877 <Iteration>
|
jpayne@1
|
5878 <Iteration_iter-num>138</Iteration_iter-num>
|
jpayne@1
|
5879 <Iteration_query-ID>Query_138</Iteration_query-ID>
|
jpayne@1
|
5880 <Iteration_query-def>fliC_j_Salmonella.enterica_Typhi.var.j+_AY353433_b,d,j__1260</Iteration_query-def>
|
jpayne@1
|
5881 <Iteration_query-len>1260</Iteration_query-len>
|
jpayne@1
|
5882 <Iteration_hits>
|
jpayne@1
|
5883 <Hit>
|
jpayne@1
|
5884 <Hit_num>1</Hit_num>
|
jpayne@1
|
5885 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5886 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5887 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5888 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5889 <Hit_hsps>
|
jpayne@1
|
5890 <Hsp>
|
jpayne@1
|
5891 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5892 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
5893 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
5894 <Hsp_evalue>9.21943e-133</Hsp_evalue>
|
jpayne@1
|
5895 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5896 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
5897 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5898 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
5899 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5900 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5901 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
5902 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
5903 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5904 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
5905 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
5906 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
5907 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
5908 </Hsp>
|
jpayne@1
|
5909 <Hsp>
|
jpayne@1
|
5910 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5911 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
5912 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
5913 <Hsp_evalue>7.86908e-64</Hsp_evalue>
|
jpayne@1
|
5914 <Hsp_query-from>1005</Hsp_query-from>
|
jpayne@1
|
5915 <Hsp_query-to>1260</Hsp_query-to>
|
jpayne@1
|
5916 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5917 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5918 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5919 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5920 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
5921 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
5922 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
5923 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
5924 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5925 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5926 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5927 </Hsp>
|
jpayne@1
|
5928 </Hit_hsps>
|
jpayne@1
|
5929 </Hit>
|
jpayne@1
|
5930 </Iteration_hits>
|
jpayne@1
|
5931 <Iteration_stat>
|
jpayne@1
|
5932 <Statistics>
|
jpayne@1
|
5933 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
5934 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
5935 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
5936 <Statistics_eff-space>67932432</Statistics_eff-space>
|
jpayne@1
|
5937 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
5938 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
5939 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
5940 </Statistics>
|
jpayne@1
|
5941 </Iteration_stat>
|
jpayne@1
|
5942 </Iteration>
|
jpayne@1
|
5943 <Iteration>
|
jpayne@1
|
5944 <Iteration_iter-num>139</Iteration_iter-num>
|
jpayne@1
|
5945 <Iteration_query-ID>Query_139</Iteration_query-ID>
|
jpayne@1
|
5946 <Iteration_query-def>fliC_j_Salmonella.enterica_Typhi.var.j+_AY353434_b,d,j__1260</Iteration_query-def>
|
jpayne@1
|
5947 <Iteration_query-len>1260</Iteration_query-len>
|
jpayne@1
|
5948 <Iteration_hits>
|
jpayne@1
|
5949 <Hit>
|
jpayne@1
|
5950 <Hit_num>1</Hit_num>
|
jpayne@1
|
5951 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
5952 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
5953 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
5954 <Hit_len>1962</Hit_len>
|
jpayne@1
|
5955 <Hit_hsps>
|
jpayne@1
|
5956 <Hsp>
|
jpayne@1
|
5957 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
5958 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
5959 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
5960 <Hsp_evalue>9.21943e-133</Hsp_evalue>
|
jpayne@1
|
5961 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
5962 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
5963 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
5964 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
5965 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5966 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5967 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
5968 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
5969 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
5970 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
5971 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
5972 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
5973 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
5974 </Hsp>
|
jpayne@1
|
5975 <Hsp>
|
jpayne@1
|
5976 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
5977 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
5978 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
5979 <Hsp_evalue>7.86908e-64</Hsp_evalue>
|
jpayne@1
|
5980 <Hsp_query-from>1005</Hsp_query-from>
|
jpayne@1
|
5981 <Hsp_query-to>1260</Hsp_query-to>
|
jpayne@1
|
5982 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
5983 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
5984 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
5985 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
5986 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
5987 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
5988 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
5989 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
5990 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
5991 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
5992 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
5993 </Hsp>
|
jpayne@1
|
5994 </Hit_hsps>
|
jpayne@1
|
5995 </Hit>
|
jpayne@1
|
5996 </Iteration_hits>
|
jpayne@1
|
5997 <Iteration_stat>
|
jpayne@1
|
5998 <Statistics>
|
jpayne@1
|
5999 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6000 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6001 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6002 <Statistics_eff-space>67932432</Statistics_eff-space>
|
jpayne@1
|
6003 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6004 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6005 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6006 </Statistics>
|
jpayne@1
|
6007 </Iteration_stat>
|
jpayne@1
|
6008 </Iteration>
|
jpayne@1
|
6009 <Iteration>
|
jpayne@1
|
6010 <Iteration_iter-num>140</Iteration_iter-num>
|
jpayne@1
|
6011 <Iteration_query-ID>Query_140</Iteration_query-ID>
|
jpayne@1
|
6012 <Iteration_query-def>fliC_k_Salmonella.enterica_IIIb.42:k:e,n,x,z15_AY353436_k,z__1488</Iteration_query-def>
|
jpayne@1
|
6013 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
6014 <Iteration_hits>
|
jpayne@1
|
6015 <Hit>
|
jpayne@1
|
6016 <Hit_num>1</Hit_num>
|
jpayne@1
|
6017 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6018 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6019 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6020 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6021 <Hit_hsps>
|
jpayne@1
|
6022 <Hsp>
|
jpayne@1
|
6023 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6024 <Hsp_bit-score>494.176</Hsp_bit-score>
|
jpayne@1
|
6025 <Hsp_score>267</Hsp_score>
|
jpayne@1
|
6026 <Hsp_evalue>1.39171e-141</Hsp_evalue>
|
jpayne@1
|
6027 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6028 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6029 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6030 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6031 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6032 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6033 <Hsp_identity>410</Hsp_identity>
|
jpayne@1
|
6034 <Hsp_positive>410</Hsp_positive>
|
jpayne@1
|
6035 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6036 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6037 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6038 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6039 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
6040 </Hsp>
|
jpayne@1
|
6041 <Hsp>
|
jpayne@1
|
6042 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6043 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
6044 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
6045 <Hsp_evalue>2.01605e-60</Hsp_evalue>
|
jpayne@1
|
6046 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
6047 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
6048 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
6049 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6050 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6051 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6052 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
6053 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
6054 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6055 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
6056 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6057 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6058 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6059 </Hsp>
|
jpayne@1
|
6060 </Hit_hsps>
|
jpayne@1
|
6061 </Hit>
|
jpayne@1
|
6062 </Iteration_hits>
|
jpayne@1
|
6063 <Iteration_stat>
|
jpayne@1
|
6064 <Statistics>
|
jpayne@1
|
6065 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6066 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6067 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6068 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
6069 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6070 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6071 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6072 </Statistics>
|
jpayne@1
|
6073 </Iteration_stat>
|
jpayne@1
|
6074 </Iteration>
|
jpayne@1
|
6075 <Iteration>
|
jpayne@1
|
6076 <Iteration_iter-num>141</Iteration_iter-num>
|
jpayne@1
|
6077 <Iteration_query-ID>Query_141</Iteration_query-ID>
|
jpayne@1
|
6078 <Iteration_query-def>fliC_k_Salmonella.enterica_IIIb.17:k:z_AY353437_k,z__1488</Iteration_query-def>
|
jpayne@1
|
6079 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
6080 <Iteration_hits>
|
jpayne@1
|
6081 <Hit>
|
jpayne@1
|
6082 <Hit_num>1</Hit_num>
|
jpayne@1
|
6083 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6084 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6085 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6086 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6087 <Hit_hsps>
|
jpayne@1
|
6088 <Hsp>
|
jpayne@1
|
6089 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6090 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
6091 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
6092 <Hsp_evalue>2.99128e-143</Hsp_evalue>
|
jpayne@1
|
6093 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6094 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6095 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6096 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6097 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6098 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6099 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
6100 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
6101 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6102 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6103 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACTATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6104 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6105 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || ||||||||||||||||||||||||||| |||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
6106 </Hsp>
|
jpayne@1
|
6107 <Hsp>
|
jpayne@1
|
6108 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6109 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
6110 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
6111 <Hsp_evalue>2.01605e-60</Hsp_evalue>
|
jpayne@1
|
6112 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
6113 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
6114 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
6115 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6116 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6117 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6118 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
6119 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
6120 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6121 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
6122 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6123 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6124 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6125 </Hsp>
|
jpayne@1
|
6126 </Hit_hsps>
|
jpayne@1
|
6127 </Hit>
|
jpayne@1
|
6128 </Iteration_hits>
|
jpayne@1
|
6129 <Iteration_stat>
|
jpayne@1
|
6130 <Statistics>
|
jpayne@1
|
6131 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6132 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6133 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6134 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
6135 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6136 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6137 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6138 </Statistics>
|
jpayne@1
|
6139 </Iteration_stat>
|
jpayne@1
|
6140 </Iteration>
|
jpayne@1
|
6141 <Iteration>
|
jpayne@1
|
6142 <Iteration_iter-num>142</Iteration_iter-num>
|
jpayne@1
|
6143 <Iteration_query-ID>Query_142</Iteration_query-ID>
|
jpayne@1
|
6144 <Iteration_query-def>fliC_k_Salmonella.enterica_IIIb.65:k:z_AY353438_k,z__1485</Iteration_query-def>
|
jpayne@1
|
6145 <Iteration_query-len>1485</Iteration_query-len>
|
jpayne@1
|
6146 <Iteration_hits>
|
jpayne@1
|
6147 <Hit>
|
jpayne@1
|
6148 <Hit_num>1</Hit_num>
|
jpayne@1
|
6149 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6150 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6151 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6152 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6153 <Hit_hsps>
|
jpayne@1
|
6154 <Hsp>
|
jpayne@1
|
6155 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6156 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
6157 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
6158 <Hsp_evalue>6.41623e-145</Hsp_evalue>
|
jpayne@1
|
6159 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6160 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6161 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6162 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6163 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6164 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6165 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
6166 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
6167 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6168 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6169 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6170 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6171 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
6172 </Hsp>
|
jpayne@1
|
6173 <Hsp>
|
jpayne@1
|
6174 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6175 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
6176 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
6177 <Hsp_evalue>2.01194e-60</Hsp_evalue>
|
jpayne@1
|
6178 <Hsp_query-from>1230</Hsp_query-from>
|
jpayne@1
|
6179 <Hsp_query-to>1485</Hsp_query-to>
|
jpayne@1
|
6180 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
6181 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6182 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6183 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6184 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
6185 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
6186 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6187 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
6188 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6189 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6190 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6191 </Hsp>
|
jpayne@1
|
6192 </Hit_hsps>
|
jpayne@1
|
6193 </Hit>
|
jpayne@1
|
6194 </Iteration_hits>
|
jpayne@1
|
6195 <Iteration_stat>
|
jpayne@1
|
6196 <Statistics>
|
jpayne@1
|
6197 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6198 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6199 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6200 <Statistics_eff-space>80239032</Statistics_eff-space>
|
jpayne@1
|
6201 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6202 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6203 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6204 </Statistics>
|
jpayne@1
|
6205 </Iteration_stat>
|
jpayne@1
|
6206 </Iteration>
|
jpayne@1
|
6207 <Iteration>
|
jpayne@1
|
6208 <Iteration_iter-num>143</Iteration_iter-num>
|
jpayne@1
|
6209 <Iteration_query-ID>Query_143</Iteration_query-ID>
|
jpayne@1
|
6210 <Iteration_query-def>fliC_k_Salmonella.enterica_IIIb.38:k:z35_AY353439_k,z__1485</Iteration_query-def>
|
jpayne@1
|
6211 <Iteration_query-len>1485</Iteration_query-len>
|
jpayne@1
|
6212 <Iteration_hits>
|
jpayne@1
|
6213 <Hit>
|
jpayne@1
|
6214 <Hit_num>1</Hit_num>
|
jpayne@1
|
6215 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6216 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6217 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6218 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6219 <Hit_hsps>
|
jpayne@1
|
6220 <Hsp>
|
jpayne@1
|
6221 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6222 <Hsp_bit-score>510.796</Hsp_bit-score>
|
jpayne@1
|
6223 <Hsp_score>276</Hsp_score>
|
jpayne@1
|
6224 <Hsp_evalue>1.37908e-146</Hsp_evalue>
|
jpayne@1
|
6225 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6226 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6227 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6228 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6229 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6230 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6231 <Hsp_identity>413</Hsp_identity>
|
jpayne@1
|
6232 <Hsp_positive>413</Hsp_positive>
|
jpayne@1
|
6233 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6234 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6235 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6236 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6237 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
6238 </Hsp>
|
jpayne@1
|
6239 <Hsp>
|
jpayne@1
|
6240 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6241 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
6242 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
6243 <Hsp_evalue>2.01194e-60</Hsp_evalue>
|
jpayne@1
|
6244 <Hsp_query-from>1230</Hsp_query-from>
|
jpayne@1
|
6245 <Hsp_query-to>1485</Hsp_query-to>
|
jpayne@1
|
6246 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
6247 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6248 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6249 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6250 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
6251 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
6252 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6253 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
6254 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6255 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6256 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6257 </Hsp>
|
jpayne@1
|
6258 </Hit_hsps>
|
jpayne@1
|
6259 </Hit>
|
jpayne@1
|
6260 </Iteration_hits>
|
jpayne@1
|
6261 <Iteration_stat>
|
jpayne@1
|
6262 <Statistics>
|
jpayne@1
|
6263 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6264 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6265 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6266 <Statistics_eff-space>80239032</Statistics_eff-space>
|
jpayne@1
|
6267 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6268 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6269 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6270 </Statistics>
|
jpayne@1
|
6271 </Iteration_stat>
|
jpayne@1
|
6272 </Iteration>
|
jpayne@1
|
6273 <Iteration>
|
jpayne@1
|
6274 <Iteration_iter-num>144</Iteration_iter-num>
|
jpayne@1
|
6275 <Iteration_query-ID>Query_144</Iteration_query-ID>
|
jpayne@1
|
6276 <Iteration_query-def>fliC_k_Salmonella.enterica_IIIb.50:k:z53_AY353440_k,z__1488</Iteration_query-def>
|
jpayne@1
|
6277 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
6278 <Iteration_hits>
|
jpayne@1
|
6279 <Hit>
|
jpayne@1
|
6280 <Hit_num>1</Hit_num>
|
jpayne@1
|
6281 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6282 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6283 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6284 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6285 <Hit_hsps>
|
jpayne@1
|
6286 <Hsp>
|
jpayne@1
|
6287 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6288 <Hsp_bit-score>501.562</Hsp_bit-score>
|
jpayne@1
|
6289 <Hsp_score>271</Hsp_score>
|
jpayne@1
|
6290 <Hsp_evalue>8.31689e-144</Hsp_evalue>
|
jpayne@1
|
6291 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6292 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6293 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6294 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6295 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6296 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6297 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
6298 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
6299 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6300 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6301 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGMTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6302 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6303 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||| ||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
6304 </Hsp>
|
jpayne@1
|
6305 <Hsp>
|
jpayne@1
|
6306 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6307 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
6308 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
6309 <Hsp_evalue>2.01605e-60</Hsp_evalue>
|
jpayne@1
|
6310 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
6311 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
6312 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
6313 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6314 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6315 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6316 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
6317 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
6318 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6319 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
6320 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6321 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6322 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6323 </Hsp>
|
jpayne@1
|
6324 </Hit_hsps>
|
jpayne@1
|
6325 </Hit>
|
jpayne@1
|
6326 </Iteration_hits>
|
jpayne@1
|
6327 <Iteration_stat>
|
jpayne@1
|
6328 <Statistics>
|
jpayne@1
|
6329 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6330 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6331 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6332 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
6333 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6334 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6335 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6336 </Statistics>
|
jpayne@1
|
6337 </Iteration_stat>
|
jpayne@1
|
6338 </Iteration>
|
jpayne@1
|
6339 <Iteration>
|
jpayne@1
|
6340 <Iteration_iter-num>145</Iteration_iter-num>
|
jpayne@1
|
6341 <Iteration_query-ID>Query_145</Iteration_query-ID>
|
jpayne@1
|
6342 <Iteration_query-def>fliC_k_Salmonella.enterica_Inverness_AY353441_k,z__1488</Iteration_query-def>
|
jpayne@1
|
6343 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
6344 <Iteration_hits>
|
jpayne@1
|
6345 <Hit>
|
jpayne@1
|
6346 <Hit_num>1</Hit_num>
|
jpayne@1
|
6347 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6348 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6349 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6350 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6351 <Hit_hsps>
|
jpayne@1
|
6352 <Hsp>
|
jpayne@1
|
6353 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6354 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
6355 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
6356 <Hsp_evalue>3.01252e-138</Hsp_evalue>
|
jpayne@1
|
6357 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6358 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6359 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6360 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6361 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6362 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6363 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
6364 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
6365 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6366 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6367 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6368 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6369 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
6370 </Hsp>
|
jpayne@1
|
6371 <Hsp>
|
jpayne@1
|
6372 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6373 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
6374 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
6375 <Hsp_evalue>9.31365e-64</Hsp_evalue>
|
jpayne@1
|
6376 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
6377 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
6378 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
6379 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6380 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6381 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6382 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
6383 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
6384 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
6385 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
6386 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6387 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6388 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6389 </Hsp>
|
jpayne@1
|
6390 </Hit_hsps>
|
jpayne@1
|
6391 </Hit>
|
jpayne@1
|
6392 </Iteration_hits>
|
jpayne@1
|
6393 <Iteration_stat>
|
jpayne@1
|
6394 <Statistics>
|
jpayne@1
|
6395 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6396 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6397 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6398 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
6399 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6400 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6401 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6402 </Statistics>
|
jpayne@1
|
6403 </Iteration_stat>
|
jpayne@1
|
6404 </Iteration>
|
jpayne@1
|
6405 <Iteration>
|
jpayne@1
|
6406 <Iteration_iter-num>146</Iteration_iter-num>
|
jpayne@1
|
6407 <Iteration_query-ID>Query_146</Iteration_query-ID>
|
jpayne@1
|
6408 <Iteration_query-def>fliC_k_Salmonella.enterica_Blockley_AY353442_k,z__1488</Iteration_query-def>
|
jpayne@1
|
6409 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
6410 <Iteration_hits>
|
jpayne@1
|
6411 <Hit>
|
jpayne@1
|
6412 <Hit_num>1</Hit_num>
|
jpayne@1
|
6413 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6414 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6415 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6416 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6417 <Hit_hsps>
|
jpayne@1
|
6418 <Hsp>
|
jpayne@1
|
6419 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6420 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
6421 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
6422 <Hsp_evalue>1.40159e-136</Hsp_evalue>
|
jpayne@1
|
6423 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6424 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6425 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6426 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6427 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6428 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6429 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
6430 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
6431 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6432 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6433 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCACAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6434 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6435 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
6436 </Hsp>
|
jpayne@1
|
6437 <Hsp>
|
jpayne@1
|
6438 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6439 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
6440 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
6441 <Hsp_evalue>9.31365e-64</Hsp_evalue>
|
jpayne@1
|
6442 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
6443 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
6444 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
6445 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6446 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6447 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6448 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
6449 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
6450 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
6451 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
6452 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6453 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6454 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6455 </Hsp>
|
jpayne@1
|
6456 </Hit_hsps>
|
jpayne@1
|
6457 </Hit>
|
jpayne@1
|
6458 </Iteration_hits>
|
jpayne@1
|
6459 <Iteration_stat>
|
jpayne@1
|
6460 <Statistics>
|
jpayne@1
|
6461 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6462 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6463 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6464 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
6465 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6466 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6467 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6468 </Statistics>
|
jpayne@1
|
6469 </Iteration_stat>
|
jpayne@1
|
6470 </Iteration>
|
jpayne@1
|
6471 <Iteration>
|
jpayne@1
|
6472 <Iteration_iter-num>147</Iteration_iter-num>
|
jpayne@1
|
6473 <Iteration_query-ID>Query_147</Iteration_query-ID>
|
jpayne@1
|
6474 <Iteration_query-def>fliC_l,v_Salmonella.enterica_Give_AY353443_l,v__1503</Iteration_query-def>
|
jpayne@1
|
6475 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
6476 <Iteration_hits>
|
jpayne@1
|
6477 <Hit>
|
jpayne@1
|
6478 <Hit_num>1</Hit_num>
|
jpayne@1
|
6479 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6480 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6481 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6482 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6483 <Hit_hsps>
|
jpayne@1
|
6484 <Hsp>
|
jpayne@1
|
6485 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6486 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
6487 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
6488 <Hsp_evalue>3.04326e-138</Hsp_evalue>
|
jpayne@1
|
6489 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6490 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6491 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6492 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6493 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6494 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6495 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
6496 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
6497 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6498 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6499 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6500 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6501 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
6502 </Hsp>
|
jpayne@1
|
6503 <Hsp>
|
jpayne@1
|
6504 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6505 <Hsp_bit-score>211.638</Hsp_bit-score>
|
jpayne@1
|
6506 <Hsp_score>114</Hsp_score>
|
jpayne@1
|
6507 <Hsp_evalue>1.58558e-56</Hsp_evalue>
|
jpayne@1
|
6508 <Hsp_query-from>1306</Hsp_query-from>
|
jpayne@1
|
6509 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
6510 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
6511 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6512 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6513 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6514 <Hsp_identity>170</Hsp_identity>
|
jpayne@1
|
6515 <Hsp_positive>170</Hsp_positive>
|
jpayne@1
|
6516 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
6517 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
6518 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATCCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6519 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6520 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6521 </Hsp>
|
jpayne@1
|
6522 </Hit_hsps>
|
jpayne@1
|
6523 </Hit>
|
jpayne@1
|
6524 </Iteration_hits>
|
jpayne@1
|
6525 <Iteration_stat>
|
jpayne@1
|
6526 <Statistics>
|
jpayne@1
|
6527 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6528 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6529 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6530 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
6531 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6532 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6533 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6534 </Statistics>
|
jpayne@1
|
6535 </Iteration_stat>
|
jpayne@1
|
6536 </Iteration>
|
jpayne@1
|
6537 <Iteration>
|
jpayne@1
|
6538 <Iteration_iter-num>148</Iteration_iter-num>
|
jpayne@1
|
6539 <Iteration_query-ID>Query_148</Iteration_query-ID>
|
jpayne@1
|
6540 <Iteration_query-def>fliC_l,v_Salmonella.enterica_Brandenburg_AY353444_l,v__1503</Iteration_query-def>
|
jpayne@1
|
6541 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
6542 <Iteration_hits>
|
jpayne@1
|
6543 <Hit>
|
jpayne@1
|
6544 <Hit_num>1</Hit_num>
|
jpayne@1
|
6545 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6546 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6547 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6548 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6549 <Hit_hsps>
|
jpayne@1
|
6550 <Hsp>
|
jpayne@1
|
6551 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6552 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
6553 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
6554 <Hsp_evalue>1.41589e-136</Hsp_evalue>
|
jpayne@1
|
6555 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6556 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6557 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6558 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6559 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6560 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6561 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
6562 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
6563 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6564 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6565 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCGGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6566 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6567 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| ||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
6568 </Hsp>
|
jpayne@1
|
6569 <Hsp>
|
jpayne@1
|
6570 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6571 <Hsp_bit-score>211.638</Hsp_bit-score>
|
jpayne@1
|
6572 <Hsp_score>114</Hsp_score>
|
jpayne@1
|
6573 <Hsp_evalue>1.58558e-56</Hsp_evalue>
|
jpayne@1
|
6574 <Hsp_query-from>1306</Hsp_query-from>
|
jpayne@1
|
6575 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
6576 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
6577 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6578 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6579 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6580 <Hsp_identity>170</Hsp_identity>
|
jpayne@1
|
6581 <Hsp_positive>170</Hsp_positive>
|
jpayne@1
|
6582 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
6583 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
6584 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATCCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6585 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6586 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6587 </Hsp>
|
jpayne@1
|
6588 </Hit_hsps>
|
jpayne@1
|
6589 </Hit>
|
jpayne@1
|
6590 </Iteration_hits>
|
jpayne@1
|
6591 <Iteration_stat>
|
jpayne@1
|
6592 <Statistics>
|
jpayne@1
|
6593 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6594 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6595 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6596 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
6597 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6598 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6599 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6600 </Statistics>
|
jpayne@1
|
6601 </Iteration_stat>
|
jpayne@1
|
6602 </Iteration>
|
jpayne@1
|
6603 <Iteration>
|
jpayne@1
|
6604 <Iteration_iter-num>149</Iteration_iter-num>
|
jpayne@1
|
6605 <Iteration_query-ID>Query_149</Iteration_query-ID>
|
jpayne@1
|
6606 <Iteration_query-def>fliC_l,v_Salmonella.enterica_IIIb.38:l,v:z54_AY353445_l,v__1503</Iteration_query-def>
|
jpayne@1
|
6607 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
6608 <Iteration_hits>
|
jpayne@1
|
6609 <Hit>
|
jpayne@1
|
6610 <Hit_num>1</Hit_num>
|
jpayne@1
|
6611 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6612 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6613 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6614 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6615 <Hit_hsps>
|
jpayne@1
|
6616 <Hsp>
|
jpayne@1
|
6617 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6618 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
6619 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
6620 <Hsp_evalue>6.49495e-145</Hsp_evalue>
|
jpayne@1
|
6621 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6622 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6623 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6624 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6625 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6626 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6627 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
6628 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
6629 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6630 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6631 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6632 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6633 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
6634 </Hsp>
|
jpayne@1
|
6635 <Hsp>
|
jpayne@1
|
6636 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6637 <Hsp_bit-score>230.105</Hsp_bit-score>
|
jpayne@1
|
6638 <Hsp_score>124</Hsp_score>
|
jpayne@1
|
6639 <Hsp_evalue>4.37743e-62</Hsp_evalue>
|
jpayne@1
|
6640 <Hsp_query-from>1248</Hsp_query-from>
|
jpayne@1
|
6641 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
6642 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
6643 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6644 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6645 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6646 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
6647 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
6648 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6649 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
6650 <Hsp_qseq>AATTGATGCTGCACTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6651 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6652 <Hsp_midline>||||||| ||||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6653 </Hsp>
|
jpayne@1
|
6654 </Hit_hsps>
|
jpayne@1
|
6655 </Hit>
|
jpayne@1
|
6656 </Iteration_hits>
|
jpayne@1
|
6657 <Iteration_stat>
|
jpayne@1
|
6658 <Statistics>
|
jpayne@1
|
6659 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6660 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6661 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6662 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
6663 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6664 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6665 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6666 </Statistics>
|
jpayne@1
|
6667 </Iteration_stat>
|
jpayne@1
|
6668 </Iteration>
|
jpayne@1
|
6669 <Iteration>
|
jpayne@1
|
6670 <Iteration_iter-num>150</Iteration_iter-num>
|
jpayne@1
|
6671 <Iteration_query-ID>Query_150</Iteration_query-ID>
|
jpayne@1
|
6672 <Iteration_query-def>fliC_l,w_Salmonella.enterica_Ayton_AY353446_l,v__1503</Iteration_query-def>
|
jpayne@1
|
6673 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
6674 <Iteration_hits>
|
jpayne@1
|
6675 <Hit>
|
jpayne@1
|
6676 <Hit_num>1</Hit_num>
|
jpayne@1
|
6677 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6678 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6679 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6680 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6681 <Hit_hsps>
|
jpayne@1
|
6682 <Hsp>
|
jpayne@1
|
6683 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6684 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
6685 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
6686 <Hsp_evalue>3.06487e-133</Hsp_evalue>
|
jpayne@1
|
6687 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6688 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6689 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6690 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6691 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6692 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6693 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
6694 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
6695 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6696 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6697 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCACAGGACAACACCCTGACCATCCAGGTCGGCGCGAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6698 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6699 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || || |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||| || || ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
6700 </Hsp>
|
jpayne@1
|
6701 <Hsp>
|
jpayne@1
|
6702 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6703 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
6704 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
6705 <Hsp_evalue>3.40799e-58</Hsp_evalue>
|
jpayne@1
|
6706 <Hsp_query-from>1291</Hsp_query-from>
|
jpayne@1
|
6707 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
6708 <Hsp_hit-from>438</Hsp_hit-from>
|
jpayne@1
|
6709 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6710 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6711 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6712 <Hsp_identity>181</Hsp_identity>
|
jpayne@1
|
6713 <Hsp_positive>181</Hsp_positive>
|
jpayne@1
|
6714 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
6715 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
6716 <Hsp_qseq>CTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6717 <Hsp_hseq>CTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6718 <Hsp_midline>||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6719 </Hsp>
|
jpayne@1
|
6720 </Hit_hsps>
|
jpayne@1
|
6721 </Hit>
|
jpayne@1
|
6722 </Iteration_hits>
|
jpayne@1
|
6723 <Iteration_stat>
|
jpayne@1
|
6724 <Statistics>
|
jpayne@1
|
6725 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6726 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6727 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6728 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
6729 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6730 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6731 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6732 </Statistics>
|
jpayne@1
|
6733 </Iteration_stat>
|
jpayne@1
|
6734 </Iteration>
|
jpayne@1
|
6735 <Iteration>
|
jpayne@1
|
6736 <Iteration_iter-num>151</Iteration_iter-num>
|
jpayne@1
|
6737 <Iteration_query-ID>Query_151</Iteration_query-ID>
|
jpayne@1
|
6738 <Iteration_query-def>fliC_l,w_Salmonella.enterica_Glidji_AY353447_l,v__1503</Iteration_query-def>
|
jpayne@1
|
6739 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
6740 <Iteration_hits>
|
jpayne@1
|
6741 <Hit>
|
jpayne@1
|
6742 <Hit_num>1</Hit_num>
|
jpayne@1
|
6743 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6744 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6745 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6746 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6747 <Hit_hsps>
|
jpayne@1
|
6748 <Hsp>
|
jpayne@1
|
6749 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6750 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
6751 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
6752 <Hsp_evalue>1.42594e-131</Hsp_evalue>
|
jpayne@1
|
6753 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6754 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6755 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6756 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6757 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6758 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6759 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
6760 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
6761 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6762 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6763 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATATCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6764 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6765 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
6766 </Hsp>
|
jpayne@1
|
6767 <Hsp>
|
jpayne@1
|
6768 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6769 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
6770 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
6771 <Hsp_evalue>3.40799e-58</Hsp_evalue>
|
jpayne@1
|
6772 <Hsp_query-from>1234</Hsp_query-from>
|
jpayne@1
|
6773 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
6774 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
6775 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6776 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6777 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6778 <Hsp_identity>220</Hsp_identity>
|
jpayne@1
|
6779 <Hsp_positive>220</Hsp_positive>
|
jpayne@1
|
6780 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6781 <Hsp_align-len>271</Hsp_align-len>
|
jpayne@1
|
6782 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAGGTGGATGCGCTGCGTTCTGACT-TGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6783 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCT-TCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6784 <Hsp_midline>||||| |||||| ||||||| | || || | | ||||| || | |||||| || |||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6785 </Hsp>
|
jpayne@1
|
6786 </Hit_hsps>
|
jpayne@1
|
6787 </Hit>
|
jpayne@1
|
6788 </Iteration_hits>
|
jpayne@1
|
6789 <Iteration_stat>
|
jpayne@1
|
6790 <Statistics>
|
jpayne@1
|
6791 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6792 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6793 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6794 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
6795 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6796 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6797 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6798 </Statistics>
|
jpayne@1
|
6799 </Iteration_stat>
|
jpayne@1
|
6800 </Iteration>
|
jpayne@1
|
6801 <Iteration>
|
jpayne@1
|
6802 <Iteration_iter-num>152</Iteration_iter-num>
|
jpayne@1
|
6803 <Iteration_query-ID>Query_152</Iteration_query-ID>
|
jpayne@1
|
6804 <Iteration_query-def>fliC_l,z13_Salmonella.enterica_Kenya_AY353449_l,v__1503</Iteration_query-def>
|
jpayne@1
|
6805 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
6806 <Iteration_hits>
|
jpayne@1
|
6807 <Hit>
|
jpayne@1
|
6808 <Hit_num>1</Hit_num>
|
jpayne@1
|
6809 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6810 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6811 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6812 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6813 <Hit_hsps>
|
jpayne@1
|
6814 <Hsp>
|
jpayne@1
|
6815 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6816 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
6817 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
6818 <Hsp_evalue>6.54107e-140</Hsp_evalue>
|
jpayne@1
|
6819 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6820 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6821 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6822 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6823 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6824 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6825 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
6826 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
6827 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6828 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6829 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6830 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6831 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
6832 </Hsp>
|
jpayne@1
|
6833 <Hsp>
|
jpayne@1
|
6834 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6835 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
6836 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
6837 <Hsp_evalue>2.02226e-65</Hsp_evalue>
|
jpayne@1
|
6838 <Hsp_query-from>1248</Hsp_query-from>
|
jpayne@1
|
6839 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
6840 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
6841 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6842 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6843 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6844 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
6845 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
6846 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6847 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
6848 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACTGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6849 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6850 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6851 </Hsp>
|
jpayne@1
|
6852 </Hit_hsps>
|
jpayne@1
|
6853 </Hit>
|
jpayne@1
|
6854 </Iteration_hits>
|
jpayne@1
|
6855 <Iteration_stat>
|
jpayne@1
|
6856 <Statistics>
|
jpayne@1
|
6857 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6858 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6859 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6860 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
6861 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6862 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6863 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6864 </Statistics>
|
jpayne@1
|
6865 </Iteration_stat>
|
jpayne@1
|
6866 </Iteration>
|
jpayne@1
|
6867 <Iteration>
|
jpayne@1
|
6868 <Iteration_iter-num>153</Iteration_iter-num>
|
jpayne@1
|
6869 <Iteration_query-ID>Query_153</Iteration_query-ID>
|
jpayne@1
|
6870 <Iteration_query-def>fliC_l,z13_Salmonella.enterica_Westerstede_AY353450_l,v__1503</Iteration_query-def>
|
jpayne@1
|
6871 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
6872 <Iteration_hits>
|
jpayne@1
|
6873 <Hit>
|
jpayne@1
|
6874 <Hit_num>1</Hit_num>
|
jpayne@1
|
6875 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6876 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6877 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6878 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6879 <Hit_hsps>
|
jpayne@1
|
6880 <Hsp>
|
jpayne@1
|
6881 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6882 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
6883 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
6884 <Hsp_evalue>3.04326e-138</Hsp_evalue>
|
jpayne@1
|
6885 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6886 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6887 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6888 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6889 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6890 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6891 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
6892 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
6893 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6894 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6895 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6896 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6897 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
6898 </Hsp>
|
jpayne@1
|
6899 <Hsp>
|
jpayne@1
|
6900 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6901 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
6902 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
6903 <Hsp_evalue>3.40799e-58</Hsp_evalue>
|
jpayne@1
|
6904 <Hsp_query-from>1291</Hsp_query-from>
|
jpayne@1
|
6905 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
6906 <Hsp_hit-from>438</Hsp_hit-from>
|
jpayne@1
|
6907 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6908 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6909 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6910 <Hsp_identity>181</Hsp_identity>
|
jpayne@1
|
6911 <Hsp_positive>181</Hsp_positive>
|
jpayne@1
|
6912 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
6913 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
6914 <Hsp_qseq>CTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6915 <Hsp_hseq>CTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6916 <Hsp_midline>||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6917 </Hsp>
|
jpayne@1
|
6918 </Hit_hsps>
|
jpayne@1
|
6919 </Hit>
|
jpayne@1
|
6920 </Iteration_hits>
|
jpayne@1
|
6921 <Iteration_stat>
|
jpayne@1
|
6922 <Statistics>
|
jpayne@1
|
6923 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6924 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6925 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6926 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
6927 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6928 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6929 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6930 </Statistics>
|
jpayne@1
|
6931 </Iteration_stat>
|
jpayne@1
|
6932 </Iteration>
|
jpayne@1
|
6933 <Iteration>
|
jpayne@1
|
6934 <Iteration_iter-num>154</Iteration_iter-num>
|
jpayne@1
|
6935 <Iteration_query-ID>Query_154</Iteration_query-ID>
|
jpayne@1
|
6936 <Iteration_query-def>fliC_l,z13,z28_Salmonella.enterica_Connecticut_AY353452_l,v__1506</Iteration_query-def>
|
jpayne@1
|
6937 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
6938 <Iteration_hits>
|
jpayne@1
|
6939 <Hit>
|
jpayne@1
|
6940 <Hit_num>1</Hit_num>
|
jpayne@1
|
6941 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
6942 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
6943 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
6944 <Hit_len>1962</Hit_len>
|
jpayne@1
|
6945 <Hit_hsps>
|
jpayne@1
|
6946 <Hsp>
|
jpayne@1
|
6947 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
6948 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
6949 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
6950 <Hsp_evalue>6.60081e-135</Hsp_evalue>
|
jpayne@1
|
6951 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
6952 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
6953 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
6954 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
6955 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6956 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6957 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
6958 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
6959 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
6960 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
6961 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAATCTGACCTCGACTCCATCCAGGCGGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTTTCTGGCCAGACCCAGTTCAACGGCGTGAAAGTTCTGGCACAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
6962 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
6963 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| ||||| || | | || ||| | |||||||| || |||||| ||||| || || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
6964 </Hsp>
|
jpayne@1
|
6965 <Hsp>
|
jpayne@1
|
6966 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
6967 <Hsp_bit-score>211.638</Hsp_bit-score>
|
jpayne@1
|
6968 <Hsp_score>114</Hsp_score>
|
jpayne@1
|
6969 <Hsp_evalue>1.58879e-56</Hsp_evalue>
|
jpayne@1
|
6970 <Hsp_query-from>1294</Hsp_query-from>
|
jpayne@1
|
6971 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
6972 <Hsp_hit-from>438</Hsp_hit-from>
|
jpayne@1
|
6973 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
6974 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
6975 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
6976 <Hsp_identity>180</Hsp_identity>
|
jpayne@1
|
6977 <Hsp_positive>180</Hsp_positive>
|
jpayne@1
|
6978 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
6979 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
6980 <Hsp_qseq>CTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACTGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
6981 <Hsp_hseq>CTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
6982 <Hsp_midline>||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
6983 </Hsp>
|
jpayne@1
|
6984 </Hit_hsps>
|
jpayne@1
|
6985 </Hit>
|
jpayne@1
|
6986 </Iteration_hits>
|
jpayne@1
|
6987 <Iteration_stat>
|
jpayne@1
|
6988 <Statistics>
|
jpayne@1
|
6989 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
6990 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
6991 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
6992 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
6993 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
6994 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
6995 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
6996 </Statistics>
|
jpayne@1
|
6997 </Iteration_stat>
|
jpayne@1
|
6998 </Iteration>
|
jpayne@1
|
6999 <Iteration>
|
jpayne@1
|
7000 <Iteration_iter-num>155</Iteration_iter-num>
|
jpayne@1
|
7001 <Iteration_query-ID>Query_155</Iteration_query-ID>
|
jpayne@1
|
7002 <Iteration_query-def>fliC_l,z13,z28_Salmonella.enterica_Fallowfield_AY353453_l,v__1506</Iteration_query-def>
|
jpayne@1
|
7003 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
7004 <Iteration_hits>
|
jpayne@1
|
7005 <Hit>
|
jpayne@1
|
7006 <Hit_num>1</Hit_num>
|
jpayne@1
|
7007 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7008 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7009 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7010 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7011 <Hit_hsps>
|
jpayne@1
|
7012 <Hsp>
|
jpayne@1
|
7013 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7014 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
7015 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
7016 <Hsp_evalue>6.55428e-140</Hsp_evalue>
|
jpayne@1
|
7017 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7018 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7019 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7020 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7021 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7022 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7023 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
7024 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
7025 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7026 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7027 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7028 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7029 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
7030 </Hsp>
|
jpayne@1
|
7031 <Hsp>
|
jpayne@1
|
7032 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7033 <Hsp_bit-score>206.098</Hsp_bit-score>
|
jpayne@1
|
7034 <Hsp_score>111</Hsp_score>
|
jpayne@1
|
7035 <Hsp_evalue>7.3919e-55</Hsp_evalue>
|
jpayne@1
|
7036 <Hsp_query-from>1309</Hsp_query-from>
|
jpayne@1
|
7037 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
7038 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
7039 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7040 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7041 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7042 <Hsp_identity>169</Hsp_identity>
|
jpayne@1
|
7043 <Hsp_positive>169</Hsp_positive>
|
jpayne@1
|
7044 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
7045 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
7046 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACTGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7047 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7048 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7049 </Hsp>
|
jpayne@1
|
7050 </Hit_hsps>
|
jpayne@1
|
7051 </Hit>
|
jpayne@1
|
7052 </Iteration_hits>
|
jpayne@1
|
7053 <Iteration_stat>
|
jpayne@1
|
7054 <Statistics>
|
jpayne@1
|
7055 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7056 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7057 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7058 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
7059 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7060 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7061 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7062 </Statistics>
|
jpayne@1
|
7063 </Iteration_stat>
|
jpayne@1
|
7064 </Iteration>
|
jpayne@1
|
7065 <Iteration>
|
jpayne@1
|
7066 <Iteration_iter-num>156</Iteration_iter-num>
|
jpayne@1
|
7067 <Iteration_query-ID>Query_156</Iteration_query-ID>
|
jpayne@1
|
7068 <Iteration_query-def>fliC_l,z13,z28_Salmonella.enterica_from-CDC_2011K-0215_l,v__1506</Iteration_query-def>
|
jpayne@1
|
7069 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
7070 <Iteration_hits>
|
jpayne@1
|
7071 <Hit>
|
jpayne@1
|
7072 <Hit_num>1</Hit_num>
|
jpayne@1
|
7073 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7074 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7075 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7076 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7077 <Hit_hsps>
|
jpayne@1
|
7078 <Hsp>
|
jpayne@1
|
7079 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7080 <Hsp_bit-score>494.176</Hsp_bit-score>
|
jpayne@1
|
7081 <Hsp_score>267</Hsp_score>
|
jpayne@1
|
7082 <Hsp_evalue>1.40875e-141</Hsp_evalue>
|
jpayne@1
|
7083 <Hsp_query-from>1027</Hsp_query-from>
|
jpayne@1
|
7084 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
7085 <Hsp_hit-from>1264</Hsp_hit-from>
|
jpayne@1
|
7086 <Hsp_hit-to>1743</Hsp_hit-to>
|
jpayne@1
|
7087 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7088 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
7089 <Hsp_identity>410</Hsp_identity>
|
jpayne@1
|
7090 <Hsp_positive>410</Hsp_positive>
|
jpayne@1
|
7091 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7092 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7093 <Hsp_qseq>CAGATCGATATCAATAGTTTCACCGTCGTTGGCGCCAACCTGGATGGTCAGGGTGTTGTCCTGCGCCAGGACTTTCACGCCGTTGAACTGAGTCTGGCCGGATACACGGTCGATTTCGTTCAGGCGCTGGGTG-ATTTCAGCCTGGATAGAGTCGAGGTCAGACTGGGAGTTGGTGCTGTTAGCAGACTGAACCGCCAGTTCACGCACACGCTGCAGGTTGTTGTTGATTTCGTTCAGCGCGCCTTCAGTGGTCTGCGCAATAGAAATACCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGGCCTTTGATGTTCGCGGTGAAACGGTTAGCAATCGCCTGACCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCGGAAGACAGACGCTCGATAGCGGTGCCCAGTGCGGACTGGGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_qseq>
|
jpayne@1
|
7094 <Hsp_hseq>CAGATCGATGGTAATGGTTTCACCATCGTTAGCACCAACCTGGATTTTCATCTGGTTGTCCTGAGACAGGACTTTAACACCGTTAAATTGAGTCTGATTAGAAACGCGATCGATTTCTTCCAGACG-TTGCTGAATTTCATCCTGGATAGATTTCAGATCGGAATCAGAGTTAGTCCCGTTAGTGGCCTGAACAGACAACTCACGCACACGCTGCAGGTTGTTGTTAATTTCATTCAGCGCACCTTCAGTGGTCTGCGCAATAGAAATGCCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTGATATTAGAAGTGAAGCGGTTAGCAATCGCCTGGCCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAGGACAGACGCTCAATAGCGGAACTCAGTGAGGACTGAGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_hseq>
|
jpayne@1
|
7095 <Hsp_midline>||||||||| ||| |||||||| ||||| || ||||||||||| ||| ||||||||| | ||||||||| || ||||| || |||||||| || || || |||||||| | ||| || | | || |||||| |||||||||| | || || || | ||||| || | ||||| | |||||| | || |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| || | ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7096 </Hsp>
|
jpayne@1
|
7097 <Hsp>
|
jpayne@1
|
7098 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7099 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
7100 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
7101 <Hsp_evalue>2.04074e-60</Hsp_evalue>
|
jpayne@1
|
7102 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7103 <Hsp_query-to>256</Hsp_query-to>
|
jpayne@1
|
7104 <Hsp_hit-from>226</Hsp_hit-from>
|
jpayne@1
|
7105 <Hsp_hit-to>481</Hsp_hit-to>
|
jpayne@1
|
7106 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7107 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
7108 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
7109 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
7110 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7111 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
7112 <Hsp_qseq>TTAACGCAGTAAAGAGAGGACGTTTTGCGGAACCTGGTTAGCCTGCGCCAGGACGGAAGTCCCTGCCTGCTGCAGAATCTGCGCGCGAGACATGTTGGAGACTTCGGTCGCGTAGTCGGAATCTTCGATACGGCTACGGGCAGAAGTCAGGTTGTTTACGGTGTTGCCCAGGTTGGTGATAGCGGAGTTGAAACGGTTTTGTACCGCACCCAGGTCAGAACGTAAC-GTGTCAACCTGTGCCAAAGCAGCATCAATT</Hsp_qseq>
|
jpayne@1
|
7113 <Hsp_hseq>TTAACGCAGTAAAGAGAGGACGTTTTGCGGAACCTGGTTCGCCTGCGCCAGAACGGAAGTACCAGCCTGCTGCAGAATCTGCGCTTTAGACATATTAGAAACTTCCGTTGCATAGTCAGCATCTTCGATACGGCTACGGGCGGAGTTCAGATTGGTTACCGTATTGCCAAGGTTGGTAATGGCTGAATCAAAACGGTTTTGAATTGCCCCCAGAGAAGAACG-AACTGCGTCCACTTTTGACAATGCAGAATCAATT</Hsp_hseq>
|
jpayne@1
|
7114 <Hsp_midline>||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||| || |||||||||||||||||||| |||||| || || ||||| || || ||||| | ||||||||||||||||||||| || |||| ||| |||| || ||||| |||||||| || || || | ||||||||||| | || ||||| |||||| ||| | ||| || | || ||| |||| |||||||</Hsp_midline>
|
jpayne@1
|
7115 </Hsp>
|
jpayne@1
|
7116 </Hit_hsps>
|
jpayne@1
|
7117 </Hit>
|
jpayne@1
|
7118 </Iteration_hits>
|
jpayne@1
|
7119 <Iteration_stat>
|
jpayne@1
|
7120 <Statistics>
|
jpayne@1
|
7121 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7122 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7123 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7124 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
7125 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7126 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7127 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7128 </Statistics>
|
jpayne@1
|
7129 </Iteration_stat>
|
jpayne@1
|
7130 </Iteration>
|
jpayne@1
|
7131 <Iteration>
|
jpayne@1
|
7132 <Iteration_iter-num>157</Iteration_iter-num>
|
jpayne@1
|
7133 <Iteration_query-ID>Query_157</Iteration_query-ID>
|
jpayne@1
|
7134 <Iteration_query-def>fliC_l,z28_Salmonella.enterica_Javiana_AY353454_l,v__1506</Iteration_query-def>
|
jpayne@1
|
7135 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
7136 <Iteration_hits>
|
jpayne@1
|
7137 <Hit>
|
jpayne@1
|
7138 <Hit_num>1</Hit_num>
|
jpayne@1
|
7139 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7140 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7141 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7142 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7143 <Hit_hsps>
|
jpayne@1
|
7144 <Hsp>
|
jpayne@1
|
7145 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7146 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
7147 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
7148 <Hsp_evalue>3.04941e-138</Hsp_evalue>
|
jpayne@1
|
7149 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7150 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7151 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7152 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7153 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7154 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7155 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
7156 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
7157 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7158 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7159 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7160 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7161 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
7162 </Hsp>
|
jpayne@1
|
7163 <Hsp>
|
jpayne@1
|
7164 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7165 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
7166 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
7167 <Hsp_evalue>3.43912e-53</Hsp_evalue>
|
jpayne@1
|
7168 <Hsp_query-from>1309</Hsp_query-from>
|
jpayne@1
|
7169 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
7170 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
7171 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7172 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7173 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7174 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
7175 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
7176 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
7177 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
7178 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATCCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCACAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7179 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7180 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7181 </Hsp>
|
jpayne@1
|
7182 </Hit_hsps>
|
jpayne@1
|
7183 </Hit>
|
jpayne@1
|
7184 </Iteration_hits>
|
jpayne@1
|
7185 <Iteration_stat>
|
jpayne@1
|
7186 <Statistics>
|
jpayne@1
|
7187 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7188 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7189 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7190 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
7191 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7192 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7193 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7194 </Statistics>
|
jpayne@1
|
7195 </Iteration_stat>
|
jpayne@1
|
7196 </Iteration>
|
jpayne@1
|
7197 <Iteration>
|
jpayne@1
|
7198 <Iteration_iter-num>158</Iteration_iter-num>
|
jpayne@1
|
7199 <Iteration_query-ID>Query_158</Iteration_query-ID>
|
jpayne@1
|
7200 <Iteration_query-def>fliC_l,z28_Salmonella.enterica_Javiana_AY353455_l,v__1506</Iteration_query-def>
|
jpayne@1
|
7201 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
7202 <Iteration_hits>
|
jpayne@1
|
7203 <Hit>
|
jpayne@1
|
7204 <Hit_num>1</Hit_num>
|
jpayne@1
|
7205 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7206 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7207 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7208 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7209 <Hit_hsps>
|
jpayne@1
|
7210 <Hsp>
|
jpayne@1
|
7211 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7212 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
7213 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
7214 <Hsp_evalue>3.04941e-138</Hsp_evalue>
|
jpayne@1
|
7215 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7216 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7217 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7218 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7219 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7220 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7221 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
7222 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
7223 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7224 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7225 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACAAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7226 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7227 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | |||||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
7228 </Hsp>
|
jpayne@1
|
7229 <Hsp>
|
jpayne@1
|
7230 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7231 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
7232 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
7233 <Hsp_evalue>3.43912e-53</Hsp_evalue>
|
jpayne@1
|
7234 <Hsp_query-from>1309</Hsp_query-from>
|
jpayne@1
|
7235 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
7236 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
7237 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7238 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7239 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7240 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
7241 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
7242 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
7243 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
7244 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATCCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCACAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7245 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7246 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7247 </Hsp>
|
jpayne@1
|
7248 </Hit_hsps>
|
jpayne@1
|
7249 </Hit>
|
jpayne@1
|
7250 </Iteration_hits>
|
jpayne@1
|
7251 <Iteration_stat>
|
jpayne@1
|
7252 <Statistics>
|
jpayne@1
|
7253 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7254 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7255 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7256 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
7257 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7258 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7259 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7260 </Statistics>
|
jpayne@1
|
7261 </Iteration_stat>
|
jpayne@1
|
7262 </Iteration>
|
jpayne@1
|
7263 <Iteration>
|
jpayne@1
|
7264 <Iteration_iter-num>159</Iteration_iter-num>
|
jpayne@1
|
7265 <Iteration_query-ID>Query_159</Iteration_query-ID>
|
jpayne@1
|
7266 <Iteration_query-def>fliC_r_Salmonella.enterica_Rubislaw_AY353458_r,i__1482</Iteration_query-def>
|
jpayne@1
|
7267 <Iteration_query-len>1482</Iteration_query-len>
|
jpayne@1
|
7268 <Iteration_hits>
|
jpayne@1
|
7269 <Hit>
|
jpayne@1
|
7270 <Hit_num>1</Hit_num>
|
jpayne@1
|
7271 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7272 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7273 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7274 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7275 <Hit_hsps>
|
jpayne@1
|
7276 <Hsp>
|
jpayne@1
|
7277 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7278 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
7279 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
7280 <Hsp_evalue>6.44857e-140</Hsp_evalue>
|
jpayne@1
|
7281 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7282 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7283 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7284 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7285 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7286 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7287 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
7288 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
7289 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7290 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7291 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7292 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7293 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
7294 </Hsp>
|
jpayne@1
|
7295 <Hsp>
|
jpayne@1
|
7296 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7297 <Hsp_bit-score>230.105</Hsp_bit-score>
|
jpayne@1
|
7298 <Hsp_score>124</Hsp_score>
|
jpayne@1
|
7299 <Hsp_evalue>4.31553e-62</Hsp_evalue>
|
jpayne@1
|
7300 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
7301 <Hsp_query-to>1482</Hsp_query-to>
|
jpayne@1
|
7302 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
7303 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7304 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7305 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7306 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
7307 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
7308 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7309 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
7310 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAGGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7311 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7312 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || || ||||| || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7313 </Hsp>
|
jpayne@1
|
7314 </Hit_hsps>
|
jpayne@1
|
7315 </Hit>
|
jpayne@1
|
7316 </Iteration_hits>
|
jpayne@1
|
7317 <Iteration_stat>
|
jpayne@1
|
7318 <Statistics>
|
jpayne@1
|
7319 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7320 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7321 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7322 <Statistics_eff-space>80074944</Statistics_eff-space>
|
jpayne@1
|
7323 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7324 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7325 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7326 </Statistics>
|
jpayne@1
|
7327 </Iteration_stat>
|
jpayne@1
|
7328 </Iteration>
|
jpayne@1
|
7329 <Iteration>
|
jpayne@1
|
7330 <Iteration_iter-num>160</Iteration_iter-num>
|
jpayne@1
|
7331 <Iteration_query-ID>Query_160</Iteration_query-ID>
|
jpayne@1
|
7332 <Iteration_query-def>fliC_r_Salmonella.enterica_Heidelberg_AY353459_r,i__1482</Iteration_query-def>
|
jpayne@1
|
7333 <Iteration_query-len>1482</Iteration_query-len>
|
jpayne@1
|
7334 <Iteration_hits>
|
jpayne@1
|
7335 <Hit>
|
jpayne@1
|
7336 <Hit_num>1</Hit_num>
|
jpayne@1
|
7337 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7338 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7339 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7340 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7341 <Hit_hsps>
|
jpayne@1
|
7342 <Hsp>
|
jpayne@1
|
7343 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7344 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
7345 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
7346 <Hsp_evalue>6.44857e-140</Hsp_evalue>
|
jpayne@1
|
7347 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7348 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7349 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7350 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7351 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7352 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7353 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
7354 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
7355 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7356 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7357 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7358 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7359 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
7360 </Hsp>
|
jpayne@1
|
7361 <Hsp>
|
jpayne@1
|
7362 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7363 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
7364 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
7365 <Hsp_evalue>1.99367e-65</Hsp_evalue>
|
jpayne@1
|
7366 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
7367 <Hsp_query-to>1482</Hsp_query-to>
|
jpayne@1
|
7368 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
7369 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7370 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7371 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7372 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
7373 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
7374 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7375 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
7376 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7377 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7378 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7379 </Hsp>
|
jpayne@1
|
7380 </Hit_hsps>
|
jpayne@1
|
7381 </Hit>
|
jpayne@1
|
7382 </Iteration_hits>
|
jpayne@1
|
7383 <Iteration_stat>
|
jpayne@1
|
7384 <Statistics>
|
jpayne@1
|
7385 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7386 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7387 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7388 <Statistics_eff-space>80074944</Statistics_eff-space>
|
jpayne@1
|
7389 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7390 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7391 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7392 </Statistics>
|
jpayne@1
|
7393 </Iteration_stat>
|
jpayne@1
|
7394 </Iteration>
|
jpayne@1
|
7395 <Iteration>
|
jpayne@1
|
7396 <Iteration_iter-num>161</Iteration_iter-num>
|
jpayne@1
|
7397 <Iteration_query-ID>Query_161</Iteration_query-ID>
|
jpayne@1
|
7398 <Iteration_query-def>fliC_r_Salmonella.enterica_IIIb.35:r:z61_AY353460_r,i__1482</Iteration_query-def>
|
jpayne@1
|
7399 <Iteration_query-len>1482</Iteration_query-len>
|
jpayne@1
|
7400 <Iteration_hits>
|
jpayne@1
|
7401 <Hit>
|
jpayne@1
|
7402 <Hit_num>1</Hit_num>
|
jpayne@1
|
7403 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7404 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7405 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7406 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7407 <Hit_hsps>
|
jpayne@1
|
7408 <Hsp>
|
jpayne@1
|
7409 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7410 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
7411 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
7412 <Hsp_evalue>2.97908e-143</Hsp_evalue>
|
jpayne@1
|
7413 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7414 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7415 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7416 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7417 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7418 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7419 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
7420 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
7421 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7422 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7423 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7424 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7425 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
7426 </Hsp>
|
jpayne@1
|
7427 <Hsp>
|
jpayne@1
|
7428 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7429 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
7430 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
7431 <Hsp_evalue>2.00782e-60</Hsp_evalue>
|
jpayne@1
|
7432 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
7433 <Hsp_query-to>1482</Hsp_query-to>
|
jpayne@1
|
7434 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
7435 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7436 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7437 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7438 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
7439 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
7440 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7441 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
7442 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7443 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7444 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7445 </Hsp>
|
jpayne@1
|
7446 </Hit_hsps>
|
jpayne@1
|
7447 </Hit>
|
jpayne@1
|
7448 </Iteration_hits>
|
jpayne@1
|
7449 <Iteration_stat>
|
jpayne@1
|
7450 <Statistics>
|
jpayne@1
|
7451 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7452 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7453 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7454 <Statistics_eff-space>80074944</Statistics_eff-space>
|
jpayne@1
|
7455 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7456 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7457 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7458 </Statistics>
|
jpayne@1
|
7459 </Iteration_stat>
|
jpayne@1
|
7460 </Iteration>
|
jpayne@1
|
7461 <Iteration>
|
jpayne@1
|
7462 <Iteration_iter-num>162</Iteration_iter-num>
|
jpayne@1
|
7463 <Iteration_query-ID>Query_162</Iteration_query-ID>
|
jpayne@1
|
7464 <Iteration_query-def>fliC_r_Salmonella.enterica_IIIb.58:r:z53:z47_AY353461_r,i__1482</Iteration_query-def>
|
jpayne@1
|
7465 <Iteration_query-len>1482</Iteration_query-len>
|
jpayne@1
|
7466 <Iteration_hits>
|
jpayne@1
|
7467 <Hit>
|
jpayne@1
|
7468 <Hit_num>1</Hit_num>
|
jpayne@1
|
7469 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7470 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7471 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7472 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7473 <Hit_hsps>
|
jpayne@1
|
7474 <Hsp>
|
jpayne@1
|
7475 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7476 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
7477 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
7478 <Hsp_evalue>6.40311e-145</Hsp_evalue>
|
jpayne@1
|
7479 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7480 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7481 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7482 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7483 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7484 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7485 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
7486 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
7487 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7488 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7489 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7490 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7491 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| ||| |||||||||</Hsp_midline>
|
jpayne@1
|
7492 </Hsp>
|
jpayne@1
|
7493 <Hsp>
|
jpayne@1
|
7494 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7495 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
7496 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
7497 <Hsp_evalue>2.00782e-60</Hsp_evalue>
|
jpayne@1
|
7498 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
7499 <Hsp_query-to>1482</Hsp_query-to>
|
jpayne@1
|
7500 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
7501 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7502 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7503 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7504 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
7505 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
7506 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7507 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
7508 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7509 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7510 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7511 </Hsp>
|
jpayne@1
|
7512 </Hit_hsps>
|
jpayne@1
|
7513 </Hit>
|
jpayne@1
|
7514 </Iteration_hits>
|
jpayne@1
|
7515 <Iteration_stat>
|
jpayne@1
|
7516 <Statistics>
|
jpayne@1
|
7517 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7518 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7519 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7520 <Statistics_eff-space>80074944</Statistics_eff-space>
|
jpayne@1
|
7521 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7522 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7523 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7524 </Statistics>
|
jpayne@1
|
7525 </Iteration_stat>
|
jpayne@1
|
7526 </Iteration>
|
jpayne@1
|
7527 <Iteration>
|
jpayne@1
|
7528 <Iteration_iter-num>163</Iteration_iter-num>
|
jpayne@1
|
7529 <Iteration_query-ID>Query_163</Iteration_query-ID>
|
jpayne@1
|
7530 <Iteration_query-def>fliC_r_Salmonella.enterica_IIIb.38:r:e,n,x,z15_AY353462_r,i__1482</Iteration_query-def>
|
jpayne@1
|
7531 <Iteration_query-len>1482</Iteration_query-len>
|
jpayne@1
|
7532 <Iteration_hits>
|
jpayne@1
|
7533 <Hit>
|
jpayne@1
|
7534 <Hit_num>1</Hit_num>
|
jpayne@1
|
7535 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7536 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7537 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7538 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7539 <Hit_hsps>
|
jpayne@1
|
7540 <Hsp>
|
jpayne@1
|
7541 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7542 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
7543 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
7544 <Hsp_evalue>2.97908e-143</Hsp_evalue>
|
jpayne@1
|
7545 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7546 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7547 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7548 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7549 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7550 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7551 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
7552 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
7553 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7554 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7555 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7556 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7557 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
7558 </Hsp>
|
jpayne@1
|
7559 <Hsp>
|
jpayne@1
|
7560 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7561 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
7562 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
7563 <Hsp_evalue>2.00782e-60</Hsp_evalue>
|
jpayne@1
|
7564 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
7565 <Hsp_query-to>1482</Hsp_query-to>
|
jpayne@1
|
7566 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
7567 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7568 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7569 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7570 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
7571 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
7572 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
7573 <Hsp_align-len>258</Hsp_align-len>
|
jpayne@1
|
7574 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAAACCG-TTTAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7575 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCA-AAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7576 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||| ||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7577 </Hsp>
|
jpayne@1
|
7578 </Hit_hsps>
|
jpayne@1
|
7579 </Hit>
|
jpayne@1
|
7580 </Iteration_hits>
|
jpayne@1
|
7581 <Iteration_stat>
|
jpayne@1
|
7582 <Statistics>
|
jpayne@1
|
7583 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7584 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7585 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7586 <Statistics_eff-space>80074944</Statistics_eff-space>
|
jpayne@1
|
7587 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7588 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7589 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7590 </Statistics>
|
jpayne@1
|
7591 </Iteration_stat>
|
jpayne@1
|
7592 </Iteration>
|
jpayne@1
|
7593 <Iteration>
|
jpayne@1
|
7594 <Iteration_iter-num>164</Iteration_iter-num>
|
jpayne@1
|
7595 <Iteration_query-ID>Query_164</Iteration_query-ID>
|
jpayne@1
|
7596 <Iteration_query-def>fliC_r,i_Salmonella.enterica_Bovismorbificans_AY353463_r,i__1476</Iteration_query-def>
|
jpayne@1
|
7597 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
7598 <Iteration_hits>
|
jpayne@1
|
7599 <Hit>
|
jpayne@1
|
7600 <Hit_num>1</Hit_num>
|
jpayne@1
|
7601 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7602 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7603 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7604 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7605 <Hit_hsps>
|
jpayne@1
|
7606 <Hsp>
|
jpayne@1
|
7607 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7608 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
7609 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
7610 <Hsp_evalue>1.39015e-136</Hsp_evalue>
|
jpayne@1
|
7611 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7612 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7613 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7614 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7615 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7616 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7617 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
7618 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
7619 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7620 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7621 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7622 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7623 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
7624 </Hsp>
|
jpayne@1
|
7625 <Hsp>
|
jpayne@1
|
7626 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7627 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
7628 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
7629 <Hsp_evalue>1.9855e-65</Hsp_evalue>
|
jpayne@1
|
7630 <Hsp_query-from>1221</Hsp_query-from>
|
jpayne@1
|
7631 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
7632 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
7633 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7634 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7635 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7636 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
7637 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
7638 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7639 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
7640 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7641 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7642 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7643 </Hsp>
|
jpayne@1
|
7644 </Hit_hsps>
|
jpayne@1
|
7645 </Hit>
|
jpayne@1
|
7646 </Iteration_hits>
|
jpayne@1
|
7647 <Iteration_stat>
|
jpayne@1
|
7648 <Statistics>
|
jpayne@1
|
7649 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7650 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7651 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7652 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
7653 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7654 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7655 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7656 </Statistics>
|
jpayne@1
|
7657 </Iteration_stat>
|
jpayne@1
|
7658 </Iteration>
|
jpayne@1
|
7659 <Iteration>
|
jpayne@1
|
7660 <Iteration_iter-num>165</Iteration_iter-num>
|
jpayne@1
|
7661 <Iteration_query-ID>Query_165</Iteration_query-ID>
|
jpayne@1
|
7662 <Iteration_query-def>fliC_r,i_Salmonella.enterica_Hidalgo_AY353464_r,i__1476</Iteration_query-def>
|
jpayne@1
|
7663 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
7664 <Iteration_hits>
|
jpayne@1
|
7665 <Hit>
|
jpayne@1
|
7666 <Hit_num>1</Hit_num>
|
jpayne@1
|
7667 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7668 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7669 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7670 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7671 <Hit_hsps>
|
jpayne@1
|
7672 <Hsp>
|
jpayne@1
|
7673 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7674 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
7675 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
7676 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
7677 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7678 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7679 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7680 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7681 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7682 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7683 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
7684 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
7685 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7686 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7687 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7688 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7689 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
7690 </Hsp>
|
jpayne@1
|
7691 <Hsp>
|
jpayne@1
|
7692 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7693 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
7694 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
7695 <Hsp_evalue>1.99959e-60</Hsp_evalue>
|
jpayne@1
|
7696 <Hsp_query-from>1221</Hsp_query-from>
|
jpayne@1
|
7697 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
7698 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
7699 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7700 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7701 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7702 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
7703 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
7704 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7705 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
7706 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATCCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCACAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7707 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7708 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||| ||||||||||| ||||| ||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7709 </Hsp>
|
jpayne@1
|
7710 </Hit_hsps>
|
jpayne@1
|
7711 </Hit>
|
jpayne@1
|
7712 </Iteration_hits>
|
jpayne@1
|
7713 <Iteration_stat>
|
jpayne@1
|
7714 <Statistics>
|
jpayne@1
|
7715 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7716 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7717 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7718 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
7719 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7720 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7721 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7722 </Statistics>
|
jpayne@1
|
7723 </Iteration_stat>
|
jpayne@1
|
7724 </Iteration>
|
jpayne@1
|
7725 <Iteration>
|
jpayne@1
|
7726 <Iteration_iter-num>166</Iteration_iter-num>
|
jpayne@1
|
7727 <Iteration_query-ID>Query_166</Iteration_query-ID>
|
jpayne@1
|
7728 <Iteration_query-def>fliC_y_Salmonella.enterica_Giza_AY353465_other.y__1521</Iteration_query-def>
|
jpayne@1
|
7729 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
7730 <Iteration_hits>
|
jpayne@1
|
7731 <Hit>
|
jpayne@1
|
7732 <Hit_num>1</Hit_num>
|
jpayne@1
|
7733 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7734 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7735 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7736 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7737 <Hit_hsps>
|
jpayne@1
|
7738 <Hsp>
|
jpayne@1
|
7739 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7740 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
7741 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
7742 <Hsp_evalue>6.66735e-135</Hsp_evalue>
|
jpayne@1
|
7743 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7744 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7745 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7746 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7747 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7748 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7749 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
7750 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
7751 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7752 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7753 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7754 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7755 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
7756 </Hsp>
|
jpayne@1
|
7757 <Hsp>
|
jpayne@1
|
7758 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7759 <Hsp_bit-score>239.338</Hsp_bit-score>
|
jpayne@1
|
7760 <Hsp_score>129</Hsp_score>
|
jpayne@1
|
7761 <Hsp_evalue>7.36152e-65</Hsp_evalue>
|
jpayne@1
|
7762 <Hsp_query-from>1252</Hsp_query-from>
|
jpayne@1
|
7763 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
7764 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
7765 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7766 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7767 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7768 <Hsp_identity>223</Hsp_identity>
|
jpayne@1
|
7769 <Hsp_positive>223</Hsp_positive>
|
jpayne@1
|
7770 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
7771 <Hsp_align-len>270</Hsp_align-len>
|
jpayne@1
|
7772 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7773 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7774 <Hsp_midline>||||| |||||| ||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7775 </Hsp>
|
jpayne@1
|
7776 </Hit_hsps>
|
jpayne@1
|
7777 </Hit>
|
jpayne@1
|
7778 </Iteration_hits>
|
jpayne@1
|
7779 <Iteration_stat>
|
jpayne@1
|
7780 <Statistics>
|
jpayne@1
|
7781 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7782 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7783 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7784 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
7785 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7786 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7787 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7788 </Statistics>
|
jpayne@1
|
7789 </Iteration_stat>
|
jpayne@1
|
7790 </Iteration>
|
jpayne@1
|
7791 <Iteration>
|
jpayne@1
|
7792 <Iteration_iter-num>167</Iteration_iter-num>
|
jpayne@1
|
7793 <Iteration_query-ID>Query_167</Iteration_query-ID>
|
jpayne@1
|
7794 <Iteration_query-def>fliC_y_Salmonella.enterica_Freetown_AY353466_other.y__1521</Iteration_query-def>
|
jpayne@1
|
7795 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
7796 <Iteration_hits>
|
jpayne@1
|
7797 <Hit>
|
jpayne@1
|
7798 <Hit_num>1</Hit_num>
|
jpayne@1
|
7799 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7800 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7801 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7802 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7803 <Hit_hsps>
|
jpayne@1
|
7804 <Hsp>
|
jpayne@1
|
7805 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7806 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
7807 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
7808 <Hsp_evalue>3.10202e-133</Hsp_evalue>
|
jpayne@1
|
7809 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7810 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7811 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7812 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7813 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7814 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7815 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
7816 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
7817 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7818 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7819 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7820 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7821 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
7822 </Hsp>
|
jpayne@1
|
7823 <Hsp>
|
jpayne@1
|
7824 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7825 <Hsp_bit-score>211.638</Hsp_bit-score>
|
jpayne@1
|
7826 <Hsp_score>114</Hsp_score>
|
jpayne@1
|
7827 <Hsp_evalue>1.6048e-56</Hsp_evalue>
|
jpayne@1
|
7828 <Hsp_query-from>1324</Hsp_query-from>
|
jpayne@1
|
7829 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
7830 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
7831 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7832 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7833 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7834 <Hsp_identity>170</Hsp_identity>
|
jpayne@1
|
7835 <Hsp_positive>170</Hsp_positive>
|
jpayne@1
|
7836 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
7837 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
7838 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7839 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7840 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7841 </Hsp>
|
jpayne@1
|
7842 </Hit_hsps>
|
jpayne@1
|
7843 </Hit>
|
jpayne@1
|
7844 </Iteration_hits>
|
jpayne@1
|
7845 <Iteration_stat>
|
jpayne@1
|
7846 <Statistics>
|
jpayne@1
|
7847 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7848 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7849 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7850 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
7851 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7852 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7853 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7854 </Statistics>
|
jpayne@1
|
7855 </Iteration_stat>
|
jpayne@1
|
7856 </Iteration>
|
jpayne@1
|
7857 <Iteration>
|
jpayne@1
|
7858 <Iteration_iter-num>168</Iteration_iter-num>
|
jpayne@1
|
7859 <Iteration_query-ID>Query_168</Iteration_query-ID>
|
jpayne@1
|
7860 <Iteration_query-def>fliC_z_Salmonella.enterica_Poona_AY353467_k,z__1500</Iteration_query-def>
|
jpayne@1
|
7861 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
7862 <Iteration_hits>
|
jpayne@1
|
7863 <Hit>
|
jpayne@1
|
7864 <Hit_num>1</Hit_num>
|
jpayne@1
|
7865 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7866 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7867 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7868 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7869 <Hit_hsps>
|
jpayne@1
|
7870 <Hsp>
|
jpayne@1
|
7871 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7872 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
7873 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
7874 <Hsp_evalue>1.42306e-131</Hsp_evalue>
|
jpayne@1
|
7875 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7876 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7877 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7878 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7879 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7880 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7881 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
7882 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
7883 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7884 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7885 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7886 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7887 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
7888 </Hsp>
|
jpayne@1
|
7889 <Hsp>
|
jpayne@1
|
7890 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7891 <Hsp_bit-score>222.718</Hsp_bit-score>
|
jpayne@1
|
7892 <Hsp_score>120</Hsp_score>
|
jpayne@1
|
7893 <Hsp_evalue>7.3102e-60</Hsp_evalue>
|
jpayne@1
|
7894 <Hsp_query-from>1288</Hsp_query-from>
|
jpayne@1
|
7895 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
7896 <Hsp_hit-from>438</Hsp_hit-from>
|
jpayne@1
|
7897 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7898 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7899 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7900 <Hsp_identity>183</Hsp_identity>
|
jpayne@1
|
7901 <Hsp_positive>183</Hsp_positive>
|
jpayne@1
|
7902 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7903 <Hsp_align-len>214</Hsp_align-len>
|
jpayne@1
|
7904 <Hsp_qseq>CTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7905 <Hsp_hseq>CTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7906 <Hsp_midline>||||| || |||| |||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7907 </Hsp>
|
jpayne@1
|
7908 </Hit_hsps>
|
jpayne@1
|
7909 </Hit>
|
jpayne@1
|
7910 </Iteration_hits>
|
jpayne@1
|
7911 <Iteration_stat>
|
jpayne@1
|
7912 <Statistics>
|
jpayne@1
|
7913 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7914 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7915 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7916 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
7917 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7918 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7919 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7920 </Statistics>
|
jpayne@1
|
7921 </Iteration_stat>
|
jpayne@1
|
7922 </Iteration>
|
jpayne@1
|
7923 <Iteration>
|
jpayne@1
|
7924 <Iteration_iter-num>169</Iteration_iter-num>
|
jpayne@1
|
7925 <Iteration_query-ID>Query_169</Iteration_query-ID>
|
jpayne@1
|
7926 <Iteration_query-def>fliC_z_Salmonella.enterica_Indiana_AY353468_k,z__1500</Iteration_query-def>
|
jpayne@1
|
7927 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
7928 <Iteration_hits>
|
jpayne@1
|
7929 <Hit>
|
jpayne@1
|
7930 <Hit_num>1</Hit_num>
|
jpayne@1
|
7931 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7932 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7933 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
7934 <Hit_len>1962</Hit_len>
|
jpayne@1
|
7935 <Hit_hsps>
|
jpayne@1
|
7936 <Hsp>
|
jpayne@1
|
7937 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
7938 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
7939 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
7940 <Hsp_evalue>3.05868e-133</Hsp_evalue>
|
jpayne@1
|
7941 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
7942 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
7943 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
7944 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
7945 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7946 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7947 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
7948 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
7949 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7950 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
7951 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAATAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
7952 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
7953 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
7954 </Hsp>
|
jpayne@1
|
7955 <Hsp>
|
jpayne@1
|
7956 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
7957 <Hsp_bit-score>211.638</Hsp_bit-score>
|
jpayne@1
|
7958 <Hsp_score>114</Hsp_score>
|
jpayne@1
|
7959 <Hsp_evalue>1.58238e-56</Hsp_evalue>
|
jpayne@1
|
7960 <Hsp_query-from>1300</Hsp_query-from>
|
jpayne@1
|
7961 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
7962 <Hsp_hit-from>426</Hsp_hit-from>
|
jpayne@1
|
7963 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
7964 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
7965 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
7966 <Hsp_identity>173</Hsp_identity>
|
jpayne@1
|
7967 <Hsp_positive>173</Hsp_positive>
|
jpayne@1
|
7968 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
7969 <Hsp_align-len>202</Hsp_align-len>
|
jpayne@1
|
7970 <Hsp_qseq>CAAAACCGTTTCAACTCCGCTATCACCAACTTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
7971 <Hsp_hseq>CAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
7972 <Hsp_midline>||||||||||| | || || || |||||| | |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
7973 </Hsp>
|
jpayne@1
|
7974 </Hit_hsps>
|
jpayne@1
|
7975 </Hit>
|
jpayne@1
|
7976 </Iteration_hits>
|
jpayne@1
|
7977 <Iteration_stat>
|
jpayne@1
|
7978 <Statistics>
|
jpayne@1
|
7979 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
7980 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
7981 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
7982 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
7983 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
7984 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
7985 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
7986 </Statistics>
|
jpayne@1
|
7987 </Iteration_stat>
|
jpayne@1
|
7988 </Iteration>
|
jpayne@1
|
7989 <Iteration>
|
jpayne@1
|
7990 <Iteration_iter-num>170</Iteration_iter-num>
|
jpayne@1
|
7991 <Iteration_query-ID>Query_170</Iteration_query-ID>
|
jpayne@1
|
7992 <Iteration_query-def>fliC_z_Salmonella.enterica_II.16:z:z42_AY353469_k,z__1500</Iteration_query-def>
|
jpayne@1
|
7993 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
7994 <Iteration_hits>
|
jpayne@1
|
7995 <Hit>
|
jpayne@1
|
7996 <Hit_num>1</Hit_num>
|
jpayne@1
|
7997 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
7998 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
7999 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8000 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8001 <Hit_hsps>
|
jpayne@1
|
8002 <Hsp>
|
jpayne@1
|
8003 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8004 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
8005 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
8006 <Hsp_evalue>6.52785e-140</Hsp_evalue>
|
jpayne@1
|
8007 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8008 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
8009 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8010 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
8011 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8012 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8013 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
8014 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
8015 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8016 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
8017 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACGCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
8018 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
8019 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
8020 </Hsp>
|
jpayne@1
|
8021 <Hsp>
|
jpayne@1
|
8022 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8023 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
8024 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
8025 <Hsp_evalue>4.39961e-57</Hsp_evalue>
|
jpayne@1
|
8026 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
8027 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
8028 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
8029 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8030 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8031 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8032 <Hsp_identity>209</Hsp_identity>
|
jpayne@1
|
8033 <Hsp_positive>209</Hsp_positive>
|
jpayne@1
|
8034 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
8035 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
8036 <Hsp_qseq>AATTGATGCTGCGCTGGCGCAGGTTGACACATTACGTTCTGACCTGGGTGCGGTACAAAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8037 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8038 <Hsp_midline>||||||| |||| || | | || ||| || | |||||| ||||| || | ||||||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8039 </Hsp>
|
jpayne@1
|
8040 </Hit_hsps>
|
jpayne@1
|
8041 </Hit>
|
jpayne@1
|
8042 </Iteration_hits>
|
jpayne@1
|
8043 <Iteration_stat>
|
jpayne@1
|
8044 <Statistics>
|
jpayne@1
|
8045 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8046 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8047 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8048 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
8049 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8050 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8051 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8052 </Statistics>
|
jpayne@1
|
8053 </Iteration_stat>
|
jpayne@1
|
8054 </Iteration>
|
jpayne@1
|
8055 <Iteration>
|
jpayne@1
|
8056 <Iteration_iter-num>171</Iteration_iter-num>
|
jpayne@1
|
8057 <Iteration_query-ID>Query_171</Iteration_query-ID>
|
jpayne@1
|
8058 <Iteration_query-def>fliC_z_Salmonella.enterica_II.40:z:z42_AY353470_k,z__1500</Iteration_query-def>
|
jpayne@1
|
8059 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
8060 <Iteration_hits>
|
jpayne@1
|
8061 <Hit>
|
jpayne@1
|
8062 <Hit_num>1</Hit_num>
|
jpayne@1
|
8063 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8064 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8065 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8066 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8067 <Hit_hsps>
|
jpayne@1
|
8068 <Hsp>
|
jpayne@1
|
8069 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8070 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
8071 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
8072 <Hsp_evalue>3.0157e-143</Hsp_evalue>
|
jpayne@1
|
8073 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8074 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
8075 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8076 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
8077 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8078 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8079 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
8080 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
8081 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8082 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
8083 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGATGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACTATCCAGGTTGGCGCCAACGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
8084 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
8085 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||| ||||||||||| ||||||||||||||||| |||||| | |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
8086 </Hsp>
|
jpayne@1
|
8087 <Hsp>
|
jpayne@1
|
8088 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8089 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
8090 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
8091 <Hsp_evalue>4.39961e-57</Hsp_evalue>
|
jpayne@1
|
8092 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
8093 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
8094 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
8095 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8096 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8097 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8098 <Hsp_identity>209</Hsp_identity>
|
jpayne@1
|
8099 <Hsp_positive>209</Hsp_positive>
|
jpayne@1
|
8100 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
8101 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
8102 <Hsp_qseq>AATTGATGCTGCGCTGGCGCAGGTTGACACATTACGTTCTGACCTGGGTGCGGTACAAAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8103 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8104 <Hsp_midline>||||||| |||| || | | || ||| || | |||||| ||||| || | ||||||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8105 </Hsp>
|
jpayne@1
|
8106 </Hit_hsps>
|
jpayne@1
|
8107 </Hit>
|
jpayne@1
|
8108 </Iteration_hits>
|
jpayne@1
|
8109 <Iteration_stat>
|
jpayne@1
|
8110 <Statistics>
|
jpayne@1
|
8111 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8112 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8113 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8114 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
8115 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8116 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8117 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8118 </Statistics>
|
jpayne@1
|
8119 </Iteration_stat>
|
jpayne@1
|
8120 </Iteration>
|
jpayne@1
|
8121 <Iteration>
|
jpayne@1
|
8122 <Iteration_iter-num>172</Iteration_iter-num>
|
jpayne@1
|
8123 <Iteration_query-ID>Query_172</Iteration_query-ID>
|
jpayne@1
|
8124 <Iteration_query-def>fliC_z10_Salmonella.enterica_Istanbul_AY353471_other.z10__1500</Iteration_query-def>
|
jpayne@1
|
8125 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
8126 <Iteration_hits>
|
jpayne@1
|
8127 <Hit>
|
jpayne@1
|
8128 <Hit_num>1</Hit_num>
|
jpayne@1
|
8129 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8130 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8131 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8132 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8133 <Hit_hsps>
|
jpayne@1
|
8134 <Hsp>
|
jpayne@1
|
8135 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8136 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
8137 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
8138 <Hsp_evalue>6.5742e-135</Hsp_evalue>
|
jpayne@1
|
8139 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8140 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
8141 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8142 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
8143 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8144 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8145 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
8146 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
8147 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8148 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
8149 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
8150 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
8151 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
8152 </Hsp>
|
jpayne@1
|
8153 <Hsp>
|
jpayne@1
|
8154 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8155 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
8156 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
8157 <Hsp_evalue>9.45634e-59</Hsp_evalue>
|
jpayne@1
|
8158 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
8159 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
8160 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
8161 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8162 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8163 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8164 <Hsp_identity>210</Hsp_identity>
|
jpayne@1
|
8165 <Hsp_positive>210</Hsp_positive>
|
jpayne@1
|
8166 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
8167 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
8168 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8169 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8170 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8171 </Hsp>
|
jpayne@1
|
8172 </Hit_hsps>
|
jpayne@1
|
8173 </Hit>
|
jpayne@1
|
8174 </Iteration_hits>
|
jpayne@1
|
8175 <Iteration_stat>
|
jpayne@1
|
8176 <Statistics>
|
jpayne@1
|
8177 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8178 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8179 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8180 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
8181 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8182 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8183 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8184 </Statistics>
|
jpayne@1
|
8185 </Iteration_stat>
|
jpayne@1
|
8186 </Iteration>
|
jpayne@1
|
8187 <Iteration>
|
jpayne@1
|
8188 <Iteration_iter-num>173</Iteration_iter-num>
|
jpayne@1
|
8189 <Iteration_query-ID>Query_173</Iteration_query-ID>
|
jpayne@1
|
8190 <Iteration_query-def>fliC_z10_Salmonella.enterica_Harrisonburg_AY353472_other.z10__1500</Iteration_query-def>
|
jpayne@1
|
8191 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
8192 <Iteration_hits>
|
jpayne@1
|
8193 <Hit>
|
jpayne@1
|
8194 <Hit_num>1</Hit_num>
|
jpayne@1
|
8195 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8196 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8197 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8198 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8199 <Hit_hsps>
|
jpayne@1
|
8200 <Hsp>
|
jpayne@1
|
8201 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8202 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
8203 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
8204 <Hsp_evalue>1.41303e-136</Hsp_evalue>
|
jpayne@1
|
8205 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8206 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
8207 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8208 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
8209 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8210 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8211 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
8212 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
8213 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8214 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
8215 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
8216 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
8217 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
8218 </Hsp>
|
jpayne@1
|
8219 <Hsp>
|
jpayne@1
|
8220 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8221 <Hsp_bit-score>211.638</Hsp_bit-score>
|
jpayne@1
|
8222 <Hsp_score>114</Hsp_score>
|
jpayne@1
|
8223 <Hsp_evalue>1.58238e-56</Hsp_evalue>
|
jpayne@1
|
8224 <Hsp_query-from>1288</Hsp_query-from>
|
jpayne@1
|
8225 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
8226 <Hsp_hit-from>438</Hsp_hit-from>
|
jpayne@1
|
8227 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8228 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8229 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8230 <Hsp_identity>180</Hsp_identity>
|
jpayne@1
|
8231 <Hsp_positive>180</Hsp_positive>
|
jpayne@1
|
8232 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
8233 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
8234 <Hsp_qseq>CTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAAGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8235 <Hsp_hseq>CTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8236 <Hsp_midline>||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8237 </Hsp>
|
jpayne@1
|
8238 </Hit_hsps>
|
jpayne@1
|
8239 </Hit>
|
jpayne@1
|
8240 </Iteration_hits>
|
jpayne@1
|
8241 <Iteration_stat>
|
jpayne@1
|
8242 <Statistics>
|
jpayne@1
|
8243 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8244 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8245 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8246 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
8247 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8248 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8249 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8250 </Statistics>
|
jpayne@1
|
8251 </Iteration_stat>
|
jpayne@1
|
8252 </Iteration>
|
jpayne@1
|
8253 <Iteration>
|
jpayne@1
|
8254 <Iteration_iter-num>174</Iteration_iter-num>
|
jpayne@1
|
8255 <Iteration_query-ID>Query_174</Iteration_query-ID>
|
jpayne@1
|
8256 <Iteration_query-def>fliC_z10_Salmonella.enterica_IIIb.28:z10:z57_AY353473_other.z10__1500</Iteration_query-def>
|
jpayne@1
|
8257 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
8258 <Iteration_hits>
|
jpayne@1
|
8259 <Hit>
|
jpayne@1
|
8260 <Hit_num>1</Hit_num>
|
jpayne@1
|
8261 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8262 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8263 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8264 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8265 <Hit_hsps>
|
jpayne@1
|
8266 <Hsp>
|
jpayne@1
|
8267 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8268 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
8269 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
8270 <Hsp_evalue>3.0157e-143</Hsp_evalue>
|
jpayne@1
|
8271 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8272 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
8273 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8274 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
8275 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8276 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8277 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
8278 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
8279 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8280 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
8281 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATAACCCAGCGTCTGAACGAAATCGATCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACA-CCACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
8282 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGA-TGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
8283 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || |||||| | ||||||||||| || || ||||||||| || ||||| || ||||| ||| | ||||||| ||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
8284 </Hsp>
|
jpayne@1
|
8285 <Hsp>
|
jpayne@1
|
8286 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8287 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
8288 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
8289 <Hsp_evalue>2.03251e-60</Hsp_evalue>
|
jpayne@1
|
8290 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
8291 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
8292 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
8293 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8294 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8295 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8296 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
8297 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
8298 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8299 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
8300 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8301 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8302 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8303 </Hsp>
|
jpayne@1
|
8304 </Hit_hsps>
|
jpayne@1
|
8305 </Hit>
|
jpayne@1
|
8306 </Iteration_hits>
|
jpayne@1
|
8307 <Iteration_stat>
|
jpayne@1
|
8308 <Statistics>
|
jpayne@1
|
8309 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8310 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8311 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8312 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
8313 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8314 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8315 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8316 </Statistics>
|
jpayne@1
|
8317 </Iteration_stat>
|
jpayne@1
|
8318 </Iteration>
|
jpayne@1
|
8319 <Iteration>
|
jpayne@1
|
8320 <Iteration_iter-num>175</Iteration_iter-num>
|
jpayne@1
|
8321 <Iteration_query-ID>Query_175</Iteration_query-ID>
|
jpayne@1
|
8322 <Iteration_query-def>fliC_z29_Salmonella.enterica_Tennessee_AY353474_other.z29__1518</Iteration_query-def>
|
jpayne@1
|
8323 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
8324 <Iteration_hits>
|
jpayne@1
|
8325 <Hit>
|
jpayne@1
|
8326 <Hit_num>1</Hit_num>
|
jpayne@1
|
8327 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8328 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8329 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8330 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8331 <Hit_hsps>
|
jpayne@1
|
8332 <Hsp>
|
jpayne@1
|
8333 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8334 <Hsp_bit-score>592.048</Hsp_bit-score>
|
jpayne@1
|
8335 <Hsp_score>320</Hsp_score>
|
jpayne@1
|
8336 <Hsp_evalue>4.89536e-171</Hsp_evalue>
|
jpayne@1
|
8337 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8338 <Hsp_query-to>541</Hsp_query-to>
|
jpayne@1
|
8339 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8340 <Hsp_hit-to>1206</Hsp_hit-to>
|
jpayne@1
|
8341 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8342 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8343 <Hsp_identity>469</Hsp_identity>
|
jpayne@1
|
8344 <Hsp_positive>469</Hsp_positive>
|
jpayne@1
|
8345 <Hsp_gaps>5</Hsp_gaps>
|
jpayne@1
|
8346 <Hsp_align-len>542</Hsp_align-len>
|
jpayne@1
|
8347 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAGGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTACGTGAGTTGACTGTTCAGGCAACTAATGGGACAAACTCTGACAGCGACCTGACCTCTATTCAAAATGAAAT-CACACAACGTTTGAGTGAAATTGATCGTGTCTCTGGTCAAACTCAATTTAACGGCGTGAAAGTGCTGGCCCAAGACAATACGCTGAAAATTCAAGTAGGAGCCAACGACGGCGAAACCATTTCTATTGATCTTAAGAAAATTGACTCAAAAAGCCTTGGAATGGATGGTTTTAACGTTAATGGCGCGCACAAAG</Hsp_qseq>
|
jpayne@1
|
8348 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAG-CAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGG-GC-CA-AAAG</Hsp_hseq>
|
jpayne@1
|
8349 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| |||||||| ||| |||| ||||| || ||||||| || |||||| || ||||| ||||| || ||| ||| |||||||||||||| || ||||| ||| | || ||||| | ||||||| || || || || ||||| || ||||||||| | || ||||| | |||||||| ||||||||||| | ||||| || || |||||||| || || ||||</Hsp_midline>
|
jpayne@1
|
8350 </Hsp>
|
jpayne@1
|
8351 <Hsp>
|
jpayne@1
|
8352 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8353 <Hsp_bit-score>303.971</Hsp_bit-score>
|
jpayne@1
|
8354 <Hsp_score>164</Hsp_score>
|
jpayne@1
|
8355 <Hsp_evalue>2.56866e-84</Hsp_evalue>
|
jpayne@1
|
8356 <Hsp_query-from>1307</Hsp_query-from>
|
jpayne@1
|
8357 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
8358 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
8359 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8360 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8361 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8362 <Hsp_identity>197</Hsp_identity>
|
jpayne@1
|
8363 <Hsp_positive>197</Hsp_positive>
|
jpayne@1
|
8364 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8365 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
8366 <Hsp_qseq>TGGGCGCAGTACAGAACCGCTTTGATTCTGCCATTACCAACCTTGGCAATACGGTAAATAA-CTTATCTTCTGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAAGCTGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8367 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAAC-TCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8368 <Hsp_midline>|||| ||| | || ||||| |||||||| |||||||||||||||||||||||||||| || || | | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8369 </Hsp>
|
jpayne@1
|
8370 </Hit_hsps>
|
jpayne@1
|
8371 </Hit>
|
jpayne@1
|
8372 </Iteration_hits>
|
jpayne@1
|
8373 <Iteration_stat>
|
jpayne@1
|
8374 <Statistics>
|
jpayne@1
|
8375 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8376 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8377 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8378 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
8379 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8380 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8381 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8382 </Statistics>
|
jpayne@1
|
8383 </Iteration_stat>
|
jpayne@1
|
8384 </Iteration>
|
jpayne@1
|
8385 <Iteration>
|
jpayne@1
|
8386 <Iteration_iter-num>176</Iteration_iter-num>
|
jpayne@1
|
8387 <Iteration_query-ID>Query_176</Iteration_query-ID>
|
jpayne@1
|
8388 <Iteration_query-def>fliC_z29_Salmonella.enterica_Cubana_AY353475_other.z29__1518</Iteration_query-def>
|
jpayne@1
|
8389 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
8390 <Iteration_hits>
|
jpayne@1
|
8391 <Hit>
|
jpayne@1
|
8392 <Hit_num>1</Hit_num>
|
jpayne@1
|
8393 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8394 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8395 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8396 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8397 <Hit_hsps>
|
jpayne@1
|
8398 <Hsp>
|
jpayne@1
|
8399 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8400 <Hsp_bit-score>592.048</Hsp_bit-score>
|
jpayne@1
|
8401 <Hsp_score>320</Hsp_score>
|
jpayne@1
|
8402 <Hsp_evalue>4.89536e-171</Hsp_evalue>
|
jpayne@1
|
8403 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8404 <Hsp_query-to>541</Hsp_query-to>
|
jpayne@1
|
8405 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8406 <Hsp_hit-to>1206</Hsp_hit-to>
|
jpayne@1
|
8407 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8408 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8409 <Hsp_identity>469</Hsp_identity>
|
jpayne@1
|
8410 <Hsp_positive>469</Hsp_positive>
|
jpayne@1
|
8411 <Hsp_gaps>5</Hsp_gaps>
|
jpayne@1
|
8412 <Hsp_align-len>542</Hsp_align-len>
|
jpayne@1
|
8413 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAGGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTACGTGAGTTGACTGTTCAGGCAACTAATGGGACAAACTCTGACAGCGACCTGACCTCTATTCAAAATGAAAT-CACACAACGTTTGAGTGAAATTGATCGTGTCTCTGGTCAAACTCAATTTAACGGCGTGAAAGTGCTGGCCCAAGACAATACGCTGAAAATTCAAGTAGGAGCCAACGACGGCGAAACCATTTCTATTGATCTTAAGAAAATTGACTCAAAAAGCCTTGGAATGGATGGTTTTAACGTTAATGGCGCGCACAAAG</Hsp_qseq>
|
jpayne@1
|
8414 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAG-CAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGG-GC-CA-AAAG</Hsp_hseq>
|
jpayne@1
|
8415 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| |||||||| ||| |||| ||||| || ||||||| || |||||| || ||||| ||||| || ||| ||| |||||||||||||| || ||||| ||| | || ||||| | ||||||| || || || || ||||| || ||||||||| | || ||||| | |||||||| ||||||||||| | ||||| || || |||||||| || || ||||</Hsp_midline>
|
jpayne@1
|
8416 </Hsp>
|
jpayne@1
|
8417 <Hsp>
|
jpayne@1
|
8418 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8419 <Hsp_bit-score>303.971</Hsp_bit-score>
|
jpayne@1
|
8420 <Hsp_score>164</Hsp_score>
|
jpayne@1
|
8421 <Hsp_evalue>2.56866e-84</Hsp_evalue>
|
jpayne@1
|
8422 <Hsp_query-from>1307</Hsp_query-from>
|
jpayne@1
|
8423 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
8424 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
8425 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8426 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8427 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8428 <Hsp_identity>197</Hsp_identity>
|
jpayne@1
|
8429 <Hsp_positive>197</Hsp_positive>
|
jpayne@1
|
8430 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8431 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
8432 <Hsp_qseq>TGGGCGCAGTACAGAACCGCTTTGATTCTGCCATTACCAACCTTGGCAATACGGTAAATAA-CTTATCTTCTGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAAGCTGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8433 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAAC-TCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8434 <Hsp_midline>|||| ||| | || ||||| |||||||| |||||||||||||||||||||||||||| || || | | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8435 </Hsp>
|
jpayne@1
|
8436 </Hit_hsps>
|
jpayne@1
|
8437 </Hit>
|
jpayne@1
|
8438 </Iteration_hits>
|
jpayne@1
|
8439 <Iteration_stat>
|
jpayne@1
|
8440 <Statistics>
|
jpayne@1
|
8441 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8442 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8443 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8444 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
8445 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8446 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8447 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8448 </Statistics>
|
jpayne@1
|
8449 </Iteration_stat>
|
jpayne@1
|
8450 </Iteration>
|
jpayne@1
|
8451 <Iteration>
|
jpayne@1
|
8452 <Iteration_iter-num>177</Iteration_iter-num>
|
jpayne@1
|
8453 <Iteration_query-ID>Query_177</Iteration_query-ID>
|
jpayne@1
|
8454 <Iteration_query-def>fliC_z29_Salmonella.enterica_Mundubbera_AY353476_other.z29__1518</Iteration_query-def>
|
jpayne@1
|
8455 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
8456 <Iteration_hits>
|
jpayne@1
|
8457 <Hit>
|
jpayne@1
|
8458 <Hit_num>1</Hit_num>
|
jpayne@1
|
8459 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8460 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8461 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8462 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8463 <Hit_hsps>
|
jpayne@1
|
8464 <Hsp>
|
jpayne@1
|
8465 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8466 <Hsp_bit-score>592.048</Hsp_bit-score>
|
jpayne@1
|
8467 <Hsp_score>320</Hsp_score>
|
jpayne@1
|
8468 <Hsp_evalue>4.89536e-171</Hsp_evalue>
|
jpayne@1
|
8469 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8470 <Hsp_query-to>541</Hsp_query-to>
|
jpayne@1
|
8471 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8472 <Hsp_hit-to>1206</Hsp_hit-to>
|
jpayne@1
|
8473 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8474 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8475 <Hsp_identity>469</Hsp_identity>
|
jpayne@1
|
8476 <Hsp_positive>469</Hsp_positive>
|
jpayne@1
|
8477 <Hsp_gaps>5</Hsp_gaps>
|
jpayne@1
|
8478 <Hsp_align-len>542</Hsp_align-len>
|
jpayne@1
|
8479 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAGGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTACGTGAGTTGACTGTTCAGGCAACTAATGGGACAAACTCTGACAGCGACCTGACCTCTATTCAAAATGAAAT-CACACAACGTTTGAGTGAAATTGATCGTGTCTCTGGTCAAACTCAATTTAACGGCGTGAAAGTGCTGGCCCAAGACAATACGCTGAAAATTCAAGTAGGAGCCAACGACGGCGAAACCATTTCTATTGATCTTAAGAAAATTGACTCAAAAAGCCTTGGAATGGATGGTTTTAACGTTAATGGCGCGCACAAAG</Hsp_qseq>
|
jpayne@1
|
8480 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAG-CAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGG-GC-CA-AAAG</Hsp_hseq>
|
jpayne@1
|
8481 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| |||||||| ||| |||| ||||| || ||||||| || |||||| || ||||| ||||| || ||| ||| |||||||||||||| || ||||| ||| | || ||||| | ||||||| || || || || ||||| || ||||||||| | || ||||| | |||||||| ||||||||||| | ||||| || || |||||||| || || ||||</Hsp_midline>
|
jpayne@1
|
8482 </Hsp>
|
jpayne@1
|
8483 <Hsp>
|
jpayne@1
|
8484 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8485 <Hsp_bit-score>303.971</Hsp_bit-score>
|
jpayne@1
|
8486 <Hsp_score>164</Hsp_score>
|
jpayne@1
|
8487 <Hsp_evalue>2.56866e-84</Hsp_evalue>
|
jpayne@1
|
8488 <Hsp_query-from>1307</Hsp_query-from>
|
jpayne@1
|
8489 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
8490 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
8491 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8492 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8493 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8494 <Hsp_identity>197</Hsp_identity>
|
jpayne@1
|
8495 <Hsp_positive>197</Hsp_positive>
|
jpayne@1
|
8496 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8497 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
8498 <Hsp_qseq>TGGGCGCAGTACAGAACCGCTTTGATTCTGCCATTACCAACCTTGGCAATACGGTAAATAA-CTTATCTTCTGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAAGCTGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8499 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAAC-TCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8500 <Hsp_midline>|||| ||| | || ||||| |||||||| |||||||||||||||||||||||||||| || || | | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8501 </Hsp>
|
jpayne@1
|
8502 </Hit_hsps>
|
jpayne@1
|
8503 </Hit>
|
jpayne@1
|
8504 </Iteration_hits>
|
jpayne@1
|
8505 <Iteration_stat>
|
jpayne@1
|
8506 <Statistics>
|
jpayne@1
|
8507 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8508 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8509 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8510 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
8511 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8512 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8513 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8514 </Statistics>
|
jpayne@1
|
8515 </Iteration_stat>
|
jpayne@1
|
8516 </Iteration>
|
jpayne@1
|
8517 <Iteration>
|
jpayne@1
|
8518 <Iteration_iter-num>178</Iteration_iter-num>
|
jpayne@1
|
8519 <Iteration_query-ID>Query_178</Iteration_query-ID>
|
jpayne@1
|
8520 <Iteration_query-def>fliC_z29_Salmonella.enterica_Mundubbera_AY353477_other.z29__1518</Iteration_query-def>
|
jpayne@1
|
8521 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
8522 <Iteration_hits>
|
jpayne@1
|
8523 <Hit>
|
jpayne@1
|
8524 <Hit_num>1</Hit_num>
|
jpayne@1
|
8525 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8526 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8527 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8528 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8529 <Hit_hsps>
|
jpayne@1
|
8530 <Hsp>
|
jpayne@1
|
8531 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8532 <Hsp_bit-score>592.048</Hsp_bit-score>
|
jpayne@1
|
8533 <Hsp_score>320</Hsp_score>
|
jpayne@1
|
8534 <Hsp_evalue>4.89536e-171</Hsp_evalue>
|
jpayne@1
|
8535 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8536 <Hsp_query-to>541</Hsp_query-to>
|
jpayne@1
|
8537 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8538 <Hsp_hit-to>1206</Hsp_hit-to>
|
jpayne@1
|
8539 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8540 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8541 <Hsp_identity>469</Hsp_identity>
|
jpayne@1
|
8542 <Hsp_positive>469</Hsp_positive>
|
jpayne@1
|
8543 <Hsp_gaps>5</Hsp_gaps>
|
jpayne@1
|
8544 <Hsp_align-len>542</Hsp_align-len>
|
jpayne@1
|
8545 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAGGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTACGTGAGTTGACTGTTCAGGCAACTAATGGGACAAACTCTGACAGCGACCTGACCTCTATTCAAAATGAAAT-CACACAACGTTTGAGTGAAATTGATCGTGTCTCTGGTCAAACTCAATTTAACGGCGTGAAAGTGCTGGCCCAAGACAATACGCTGAAAATTCAAGTAGGAGCCAACGACGGCGAAACCATTTCTATTGATCTTAAGAAAATTGACTCAAAAAGCCTTGGAATGGATGGTTTTAACGTTAATGGCGCGCACAAAG</Hsp_qseq>
|
jpayne@1
|
8546 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAG-CAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGG-GC-CA-AAAG</Hsp_hseq>
|
jpayne@1
|
8547 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || |||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| |||||||| ||| |||| ||||| || ||||||| || |||||| || ||||| ||||| || ||| ||| |||||||||||||| || ||||| ||| | || ||||| | ||||||| || || || || ||||| || ||||||||| | || ||||| | |||||||| ||||||||||| | ||||| || || |||||||| || || ||||</Hsp_midline>
|
jpayne@1
|
8548 </Hsp>
|
jpayne@1
|
8549 <Hsp>
|
jpayne@1
|
8550 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8551 <Hsp_bit-score>303.971</Hsp_bit-score>
|
jpayne@1
|
8552 <Hsp_score>164</Hsp_score>
|
jpayne@1
|
8553 <Hsp_evalue>2.56866e-84</Hsp_evalue>
|
jpayne@1
|
8554 <Hsp_query-from>1307</Hsp_query-from>
|
jpayne@1
|
8555 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
8556 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
8557 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8558 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8559 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8560 <Hsp_identity>197</Hsp_identity>
|
jpayne@1
|
8561 <Hsp_positive>197</Hsp_positive>
|
jpayne@1
|
8562 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8563 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
8564 <Hsp_qseq>TGGGCGCAGTACAGAACCGCTTTGATTCTGCCATTACCAACCTTGGCAATACGGTAAATAA-CTTATCTTCTGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAAGCTGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8565 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAAC-TCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8566 <Hsp_midline>|||| ||| | || ||||| |||||||| |||||||||||||||||||||||||||| || || | | || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8567 </Hsp>
|
jpayne@1
|
8568 </Hit_hsps>
|
jpayne@1
|
8569 </Hit>
|
jpayne@1
|
8570 </Iteration_hits>
|
jpayne@1
|
8571 <Iteration_stat>
|
jpayne@1
|
8572 <Statistics>
|
jpayne@1
|
8573 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8574 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8575 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8576 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
8577 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8578 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8579 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8580 </Statistics>
|
jpayne@1
|
8581 </Iteration_stat>
|
jpayne@1
|
8582 </Iteration>
|
jpayne@1
|
8583 <Iteration>
|
jpayne@1
|
8584 <Iteration_iter-num>179</Iteration_iter-num>
|
jpayne@1
|
8585 <Iteration_query-ID>Query_179</Iteration_query-ID>
|
jpayne@1
|
8586 <Iteration_query-def>fliC_z29_Salmonella.enterica_IIIa.41:z29:-_AY353478_other.z29__1518</Iteration_query-def>
|
jpayne@1
|
8587 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
8588 <Iteration_hits>
|
jpayne@1
|
8589 <Hit>
|
jpayne@1
|
8590 <Hit_num>1</Hit_num>
|
jpayne@1
|
8591 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8592 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8593 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8594 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8595 <Hit_hsps>
|
jpayne@1
|
8596 <Hsp>
|
jpayne@1
|
8597 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8598 <Hsp_bit-score>520.029</Hsp_bit-score>
|
jpayne@1
|
8599 <Hsp_score>281</Hsp_score>
|
jpayne@1
|
8600 <Hsp_evalue>2.34296e-149</Hsp_evalue>
|
jpayne@1
|
8601 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8602 <Hsp_query-to>541</Hsp_query-to>
|
jpayne@1
|
8603 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8604 <Hsp_hit-to>1206</Hsp_hit-to>
|
jpayne@1
|
8605 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8606 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8607 <Hsp_identity>456</Hsp_identity>
|
jpayne@1
|
8608 <Hsp_positive>456</Hsp_positive>
|
jpayne@1
|
8609 <Hsp_gaps>5</Hsp_gaps>
|
jpayne@1
|
8610 <Hsp_align-len>542</Hsp_align-len>
|
jpayne@1
|
8611 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAGGGTGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTACGTGAGTTGACTGTTCAGGCAACTAATGGGACAAACTCTGATAGCGACCTGACCTCTATTCAAAATGAAAT-CACACAACGTTTGAGTGAAATTGATCGTGTCTCTGGTCAAACTCAATTTAACGGCGTGAAAGTGCTGGCCCAAGACAATACGCTGAAAATTCAAGTAGGAGCCAACGACGGCGAAACCATTTCTATTGATCTTAAGAAAATTGACTCAAAAAGTCTTGGAATGGATGGCTTTAACGTCAATGGCGCACACAAAG</Hsp_qseq>
|
jpayne@1
|
8612 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAG-CAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGG-GC-CA-AAAG</Hsp_hseq>
|
jpayne@1
|
8613 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| ||||||||| ||| |||| ||||| || ||||||| || |||||| || ||||| ||||| || ||| ||| |||||||||||||| || ||||| ||| | || ||||| | ||||||| || || || || ||||| || ||||||||| | || ||||| | |||||||| ||||| ||||| | ||||| || || || ||||| || || ||||</Hsp_midline>
|
jpayne@1
|
8614 </Hsp>
|
jpayne@1
|
8615 <Hsp>
|
jpayne@1
|
8616 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8617 <Hsp_bit-score>292.891</Hsp_bit-score>
|
jpayne@1
|
8618 <Hsp_score>158</Hsp_score>
|
jpayne@1
|
8619 <Hsp_evalue>5.56018e-81</Hsp_evalue>
|
jpayne@1
|
8620 <Hsp_query-from>1307</Hsp_query-from>
|
jpayne@1
|
8621 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
8622 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
8623 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8624 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8625 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8626 <Hsp_identity>195</Hsp_identity>
|
jpayne@1
|
8627 <Hsp_positive>195</Hsp_positive>
|
jpayne@1
|
8628 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8629 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
8630 <Hsp_qseq>TGGGCGCAGTACAGAACCGCTTTGATTCTGCCATTACCAACCTTGGTAATACGGTAAATAA-CTTATCTTCTGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCCGGCACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAGCGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8631 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAAC-TCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8632 <Hsp_midline>|||| ||| | || ||||| |||||||| ||||||||||||||||| |||||||||| || || | | || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8633 </Hsp>
|
jpayne@1
|
8634 </Hit_hsps>
|
jpayne@1
|
8635 </Hit>
|
jpayne@1
|
8636 </Iteration_hits>
|
jpayne@1
|
8637 <Iteration_stat>
|
jpayne@1
|
8638 <Statistics>
|
jpayne@1
|
8639 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8640 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8641 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8642 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
8643 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8644 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8645 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8646 </Statistics>
|
jpayne@1
|
8647 </Iteration_stat>
|
jpayne@1
|
8648 </Iteration>
|
jpayne@1
|
8649 <Iteration>
|
jpayne@1
|
8650 <Iteration_iter-num>180</Iteration_iter-num>
|
jpayne@1
|
8651 <Iteration_query-ID>Query_180</Iteration_query-ID>
|
jpayne@1
|
8652 <Iteration_query-def>fliC_z29_Salmonella.enterica_IIIa.62:z29:-_AY353479_other.z29__1518</Iteration_query-def>
|
jpayne@1
|
8653 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
8654 <Iteration_hits>
|
jpayne@1
|
8655 <Hit>
|
jpayne@1
|
8656 <Hit_num>1</Hit_num>
|
jpayne@1
|
8657 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8658 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8659 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8660 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8661 <Hit_hsps>
|
jpayne@1
|
8662 <Hsp>
|
jpayne@1
|
8663 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8664 <Hsp_bit-score>520.029</Hsp_bit-score>
|
jpayne@1
|
8665 <Hsp_score>281</Hsp_score>
|
jpayne@1
|
8666 <Hsp_evalue>2.34296e-149</Hsp_evalue>
|
jpayne@1
|
8667 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8668 <Hsp_query-to>541</Hsp_query-to>
|
jpayne@1
|
8669 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8670 <Hsp_hit-to>1206</Hsp_hit-to>
|
jpayne@1
|
8671 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8672 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8673 <Hsp_identity>456</Hsp_identity>
|
jpayne@1
|
8674 <Hsp_positive>456</Hsp_positive>
|
jpayne@1
|
8675 <Hsp_gaps>5</Hsp_gaps>
|
jpayne@1
|
8676 <Hsp_align-len>542</Hsp_align-len>
|
jpayne@1
|
8677 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAGGGTGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTACGTGAGTTGACTGTTCAGGCAACTAATGGGACAAACTCTGATAGCGACCTGACCTCTATTCAAAATGAAAT-CACACAACGTTTGAGTGAAATTGATCGTGTCTCTGGTCAAACTCAATTTAACGGCGTGAAAGTGCTGGCCCAAGACAATACGCTGAAAATTCAAGTAGGAGCCAACGACGGCGAAACCATTTCTATTGATCTTAAGAAAATTGACTCAAAAAGTCTTGGAATGGATGGCTTTAACGTCAATGGCGCACACAAAG</Hsp_qseq>
|
jpayne@1
|
8678 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAG-CAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGG-GC-CA-AAAG</Hsp_hseq>
|
jpayne@1
|
8679 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || ||||||||||||||||| |||||| ||||||||||||||||||||||||||||||| ||||||||| |||||||||| ||||| ||||| ||||||||| ||| |||| ||||| || ||||||| || |||||| || ||||| ||||| || ||| ||| |||||||||||||| || ||||| ||| | || ||||| | ||||||| || || || || ||||| || ||||||||| | || ||||| | |||||||| ||||| ||||| | ||||| || || || ||||| || || ||||</Hsp_midline>
|
jpayne@1
|
8680 </Hsp>
|
jpayne@1
|
8681 <Hsp>
|
jpayne@1
|
8682 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8683 <Hsp_bit-score>287.351</Hsp_bit-score>
|
jpayne@1
|
8684 <Hsp_score>155</Hsp_score>
|
jpayne@1
|
8685 <Hsp_evalue>2.5869e-79</Hsp_evalue>
|
jpayne@1
|
8686 <Hsp_query-from>1307</Hsp_query-from>
|
jpayne@1
|
8687 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
8688 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
8689 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8690 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8691 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8692 <Hsp_identity>194</Hsp_identity>
|
jpayne@1
|
8693 <Hsp_positive>194</Hsp_positive>
|
jpayne@1
|
8694 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8695 <Hsp_align-len>213</Hsp_align-len>
|
jpayne@1
|
8696 <Hsp_qseq>TGGGCGCAGTACAGAACCGCTTTGATTCTGCCATTACCAACCTTGGTAATACGGTAAATAA-CTTATCTTCTGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTATAAAGCGCAGATTCTGCAGCAGGCCGGCACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAGCGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8697 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAAC-TCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8698 <Hsp_midline>|||| ||| | || ||||| |||||||| ||||||||||||||||| |||||||||| || || | | || |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||| ||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8699 </Hsp>
|
jpayne@1
|
8700 </Hit_hsps>
|
jpayne@1
|
8701 </Hit>
|
jpayne@1
|
8702 </Iteration_hits>
|
jpayne@1
|
8703 <Iteration_stat>
|
jpayne@1
|
8704 <Statistics>
|
jpayne@1
|
8705 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8706 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8707 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8708 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
8709 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8710 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8711 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8712 </Statistics>
|
jpayne@1
|
8713 </Iteration_stat>
|
jpayne@1
|
8714 </Iteration>
|
jpayne@1
|
8715 <Iteration>
|
jpayne@1
|
8716 <Iteration_iter-num>181</Iteration_iter-num>
|
jpayne@1
|
8717 <Iteration_query-ID>Query_181</Iteration_query-ID>
|
jpayne@1
|
8718 <Iteration_query-def>fliC_z35_Salmonella.enterica_Tema_AY353480_other.z35__1488</Iteration_query-def>
|
jpayne@1
|
8719 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
8720 <Iteration_hits>
|
jpayne@1
|
8721 <Hit>
|
jpayne@1
|
8722 <Hit_num>1</Hit_num>
|
jpayne@1
|
8723 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8724 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8725 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8726 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8727 <Hit_hsps>
|
jpayne@1
|
8728 <Hsp>
|
jpayne@1
|
8729 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8730 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
8731 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
8732 <Hsp_evalue>6.56726e-130</Hsp_evalue>
|
jpayne@1
|
8733 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8734 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
8735 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8736 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
8737 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8738 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8739 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
8740 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
8741 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8742 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
8743 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAATGACGGTATTTCTATTGCACAGACCACGGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAATCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
8744 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
8745 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||| |||||||||</Hsp_midline>
|
jpayne@1
|
8746 </Hsp>
|
jpayne@1
|
8747 <Hsp>
|
jpayne@1
|
8748 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8749 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
8750 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
8751 <Hsp_evalue>2.00184e-65</Hsp_evalue>
|
jpayne@1
|
8752 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
8753 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
8754 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
8755 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8756 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8757 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8758 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
8759 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
8760 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8761 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
8762 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8763 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8764 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8765 </Hsp>
|
jpayne@1
|
8766 </Hit_hsps>
|
jpayne@1
|
8767 </Hit>
|
jpayne@1
|
8768 </Iteration_hits>
|
jpayne@1
|
8769 <Iteration_stat>
|
jpayne@1
|
8770 <Statistics>
|
jpayne@1
|
8771 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8772 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8773 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8774 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
8775 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8776 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8777 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8778 </Statistics>
|
jpayne@1
|
8779 </Iteration_stat>
|
jpayne@1
|
8780 </Iteration>
|
jpayne@1
|
8781 <Iteration>
|
jpayne@1
|
8782 <Iteration_iter-num>182</Iteration_iter-num>
|
jpayne@1
|
8783 <Iteration_query-ID>Query_182</Iteration_query-ID>
|
jpayne@1
|
8784 <Iteration_query-def>fliC_z35_Salmonella.enterica_Tienba_AY353481_other.z35__1488</Iteration_query-def>
|
jpayne@1
|
8785 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
8786 <Iteration_hits>
|
jpayne@1
|
8787 <Hit>
|
jpayne@1
|
8788 <Hit_num>1</Hit_num>
|
jpayne@1
|
8789 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8790 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8791 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8792 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8793 <Hit_hsps>
|
jpayne@1
|
8794 <Hsp>
|
jpayne@1
|
8795 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8796 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
8797 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
8798 <Hsp_evalue>1.41154e-131</Hsp_evalue>
|
jpayne@1
|
8799 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8800 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
8801 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8802 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
8803 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8804 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8805 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
8806 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
8807 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
8808 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
8809 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAAGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTGCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
8810 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
8811 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||| | |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
8812 </Hsp>
|
jpayne@1
|
8813 <Hsp>
|
jpayne@1
|
8814 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8815 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
8816 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
8817 <Hsp_evalue>9.37977e-59</Hsp_evalue>
|
jpayne@1
|
8818 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
8819 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
8820 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
8821 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8822 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8823 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8824 <Hsp_identity>210</Hsp_identity>
|
jpayne@1
|
8825 <Hsp_positive>210</Hsp_positive>
|
jpayne@1
|
8826 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
8827 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
8828 <Hsp_qseq>AATTGATGCTGCTTTAGCACAGGTTGATGCGCTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8829 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8830 <Hsp_midline>||||||| |||| || || | || || || | |||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8831 </Hsp>
|
jpayne@1
|
8832 </Hit_hsps>
|
jpayne@1
|
8833 </Hit>
|
jpayne@1
|
8834 </Iteration_hits>
|
jpayne@1
|
8835 <Iteration_stat>
|
jpayne@1
|
8836 <Statistics>
|
jpayne@1
|
8837 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8838 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8839 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8840 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
8841 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8842 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8843 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8844 </Statistics>
|
jpayne@1
|
8845 </Iteration_stat>
|
jpayne@1
|
8846 </Iteration>
|
jpayne@1
|
8847 <Iteration>
|
jpayne@1
|
8848 <Iteration_iter-num>183</Iteration_iter-num>
|
jpayne@1
|
8849 <Iteration_query-ID>Query_183</Iteration_query-ID>
|
jpayne@1
|
8850 <Iteration_query-def>fliC_z36_Salmonella.enterica_Potosi_AY353482_z36,z38__1266</Iteration_query-def>
|
jpayne@1
|
8851 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
8852 <Iteration_hits>
|
jpayne@1
|
8853 <Hit>
|
jpayne@1
|
8854 <Hit_num>1</Hit_num>
|
jpayne@1
|
8855 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8856 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8857 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8858 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8859 <Hit_hsps>
|
jpayne@1
|
8860 <Hsp>
|
jpayne@1
|
8861 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8862 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
8863 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
8864 <Hsp_evalue>1.20688e-126</Hsp_evalue>
|
jpayne@1
|
8865 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8866 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
8867 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8868 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
8869 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8870 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8871 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
8872 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
8873 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
8874 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
8875 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCAAACTCTGACTCTGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
8876 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
8877 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | |||||||| || ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
8878 </Hsp>
|
jpayne@1
|
8879 </Hit_hsps>
|
jpayne@1
|
8880 </Hit>
|
jpayne@1
|
8881 </Iteration_hits>
|
jpayne@1
|
8882 <Iteration_stat>
|
jpayne@1
|
8883 <Statistics>
|
jpayne@1
|
8884 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8885 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8886 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8887 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
8888 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8889 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8890 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8891 </Statistics>
|
jpayne@1
|
8892 </Iteration_stat>
|
jpayne@1
|
8893 </Iteration>
|
jpayne@1
|
8894 <Iteration>
|
jpayne@1
|
8895 <Iteration_iter-num>184</Iteration_iter-num>
|
jpayne@1
|
8896 <Iteration_query-ID>Query_184</Iteration_query-ID>
|
jpayne@1
|
8897 <Iteration_query-def>fliC_z36_Salmonella.enterica_Weslaco_AY353483_z36,z38__1266</Iteration_query-def>
|
jpayne@1
|
8898 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
8899 <Iteration_hits>
|
jpayne@1
|
8900 <Hit>
|
jpayne@1
|
8901 <Hit_num>1</Hit_num>
|
jpayne@1
|
8902 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8903 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8904 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8905 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8906 <Hit_hsps>
|
jpayne@1
|
8907 <Hsp>
|
jpayne@1
|
8908 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8909 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
8910 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
8911 <Hsp_evalue>1.20688e-126</Hsp_evalue>
|
jpayne@1
|
8912 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8913 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
8914 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8915 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
8916 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8917 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8918 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
8919 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
8920 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
8921 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
8922 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCAAACTCTGACTCTGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
8923 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
8924 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | |||||||| || ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
8925 </Hsp>
|
jpayne@1
|
8926 </Hit_hsps>
|
jpayne@1
|
8927 </Hit>
|
jpayne@1
|
8928 </Iteration_hits>
|
jpayne@1
|
8929 <Iteration_stat>
|
jpayne@1
|
8930 <Statistics>
|
jpayne@1
|
8931 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8932 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8933 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
8934 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
8935 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
8936 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
8937 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
8938 </Statistics>
|
jpayne@1
|
8939 </Iteration_stat>
|
jpayne@1
|
8940 </Iteration>
|
jpayne@1
|
8941 <Iteration>
|
jpayne@1
|
8942 <Iteration_iter-num>185</Iteration_iter-num>
|
jpayne@1
|
8943 <Iteration_query-ID>Query_185</Iteration_query-ID>
|
jpayne@1
|
8944 <Iteration_query-def>fliC_z36_Salmonella.enterica_IIIa.43:z36:-_AY353484_z36,z38__1266</Iteration_query-def>
|
jpayne@1
|
8945 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
8946 <Iteration_hits>
|
jpayne@1
|
8947 <Hit>
|
jpayne@1
|
8948 <Hit_num>1</Hit_num>
|
jpayne@1
|
8949 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
8950 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
8951 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
8952 <Hit_len>1962</Hit_len>
|
jpayne@1
|
8953 <Hit_hsps>
|
jpayne@1
|
8954 <Hsp>
|
jpayne@1
|
8955 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
8956 <Hsp_bit-score>425.85</Hsp_bit-score>
|
jpayne@1
|
8957 <Hsp_score>230</Hsp_score>
|
jpayne@1
|
8958 <Hsp_evalue>4.37152e-121</Hsp_evalue>
|
jpayne@1
|
8959 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
8960 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
8961 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
8962 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
8963 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8964 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8965 <Hsp_identity>322</Hsp_identity>
|
jpayne@1
|
8966 <Hsp_positive>322</Hsp_positive>
|
jpayne@1
|
8967 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
8968 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
8969 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAGTTGTCTGTTCAGGCAGCAAACGGCTCAAACTCTGACTCTGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
8970 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
8971 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||| ||||||||||||||||| | ||||| | |||||||| || ||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
8972 </Hsp>
|
jpayne@1
|
8973 <Hsp>
|
jpayne@1
|
8974 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
8975 <Hsp_bit-score>228.258</Hsp_bit-score>
|
jpayne@1
|
8976 <Hsp_score>123</Hsp_score>
|
jpayne@1
|
8977 <Hsp_evalue>1.32314e-61</Hsp_evalue>
|
jpayne@1
|
8978 <Hsp_query-from>1069</Hsp_query-from>
|
jpayne@1
|
8979 <Hsp_query-to>1266</Hsp_query-to>
|
jpayne@1
|
8980 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
8981 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
8982 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
8983 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
8984 <Hsp_identity>173</Hsp_identity>
|
jpayne@1
|
8985 <Hsp_positive>173</Hsp_positive>
|
jpayne@1
|
8986 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
8987 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
8988 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACGGTAAATAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
8989 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
8990 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| ||||||| || ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
8991 </Hsp>
|
jpayne@1
|
8992 </Hit_hsps>
|
jpayne@1
|
8993 </Hit>
|
jpayne@1
|
8994 </Iteration_hits>
|
jpayne@1
|
8995 <Iteration_stat>
|
jpayne@1
|
8996 <Statistics>
|
jpayne@1
|
8997 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
8998 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
8999 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9000 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
9001 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9002 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9003 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9004 </Statistics>
|
jpayne@1
|
9005 </Iteration_stat>
|
jpayne@1
|
9006 </Iteration>
|
jpayne@1
|
9007 <Iteration>
|
jpayne@1
|
9008 <Iteration_iter-num>186</Iteration_iter-num>
|
jpayne@1
|
9009 <Iteration_query-ID>Query_186</Iteration_query-ID>
|
jpayne@1
|
9010 <Iteration_query-def>fliC_z36,z38_Salmonella.enterica_IV.1,53:z36,z38:-_AY353485_z36,z38__1266</Iteration_query-def>
|
jpayne@1
|
9011 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
9012 <Iteration_hits>
|
jpayne@1
|
9013 <Hit>
|
jpayne@1
|
9014 <Hit_num>1</Hit_num>
|
jpayne@1
|
9015 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9016 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9017 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9018 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9019 <Hit_hsps>
|
jpayne@1
|
9020 <Hsp>
|
jpayne@1
|
9021 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9022 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
9023 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
9024 <Hsp_evalue>1.20688e-126</Hsp_evalue>
|
jpayne@1
|
9025 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9026 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
9027 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9028 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
9029 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9030 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9031 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
9032 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
9033 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9034 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
9035 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCAAACGACGGTATTTCCATTGCGCAGACGACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCAAACTCTGACTCTGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATTACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
9036 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
9037 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | |||||||| || ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| ||||| |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
9038 </Hsp>
|
jpayne@1
|
9039 <Hsp>
|
jpayne@1
|
9040 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9041 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
9042 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
9043 <Hsp_evalue>2.88442e-53</Hsp_evalue>
|
jpayne@1
|
9044 <Hsp_query-from>1069</Hsp_query-from>
|
jpayne@1
|
9045 <Hsp_query-to>1266</Hsp_query-to>
|
jpayne@1
|
9046 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
9047 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9048 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9049 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9050 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
9051 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
9052 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9053 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
9054 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCTGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9055 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9056 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9057 </Hsp>
|
jpayne@1
|
9058 </Hit_hsps>
|
jpayne@1
|
9059 </Hit>
|
jpayne@1
|
9060 </Iteration_hits>
|
jpayne@1
|
9061 <Iteration_stat>
|
jpayne@1
|
9062 <Statistics>
|
jpayne@1
|
9063 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9064 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9065 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9066 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
9067 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9068 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9069 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9070 </Statistics>
|
jpayne@1
|
9071 </Iteration_stat>
|
jpayne@1
|
9072 </Iteration>
|
jpayne@1
|
9073 <Iteration>
|
jpayne@1
|
9074 <Iteration_iter-num>187</Iteration_iter-num>
|
jpayne@1
|
9075 <Iteration_query-ID>Query_187</Iteration_query-ID>
|
jpayne@1
|
9076 <Iteration_query-def>fliC_z36,z38_Salmonella.enterica_IV.43:z36,z38:-_AY353486_z36,z38__1266</Iteration_query-def>
|
jpayne@1
|
9077 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
9078 <Iteration_hits>
|
jpayne@1
|
9079 <Hit>
|
jpayne@1
|
9080 <Hit_num>1</Hit_num>
|
jpayne@1
|
9081 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9082 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9083 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9084 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9085 <Hit_hsps>
|
jpayne@1
|
9086 <Hsp>
|
jpayne@1
|
9087 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9088 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
9089 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
9090 <Hsp_evalue>5.61505e-125</Hsp_evalue>
|
jpayne@1
|
9091 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9092 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
9093 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9094 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
9095 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9096 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9097 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
9098 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
9099 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9100 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
9101 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCAAACGACGGTATTTCCATTGCGCAGACGACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCAAACTCTGACTCTGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATTACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
9102 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
9103 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | |||||||| || ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| ||||| |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
9104 </Hsp>
|
jpayne@1
|
9105 <Hsp>
|
jpayne@1
|
9106 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9107 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
9108 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
9109 <Hsp_evalue>2.88442e-53</Hsp_evalue>
|
jpayne@1
|
9110 <Hsp_query-from>1069</Hsp_query-from>
|
jpayne@1
|
9111 <Hsp_query-to>1266</Hsp_query-to>
|
jpayne@1
|
9112 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
9113 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9114 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9115 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9116 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
9117 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
9118 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9119 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
9120 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCTGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9121 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9122 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9123 </Hsp>
|
jpayne@1
|
9124 </Hit_hsps>
|
jpayne@1
|
9125 </Hit>
|
jpayne@1
|
9126 </Iteration_hits>
|
jpayne@1
|
9127 <Iteration_stat>
|
jpayne@1
|
9128 <Statistics>
|
jpayne@1
|
9129 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9130 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9131 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9132 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
9133 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9134 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9135 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9136 </Statistics>
|
jpayne@1
|
9137 </Iteration_stat>
|
jpayne@1
|
9138 </Iteration>
|
jpayne@1
|
9139 <Iteration>
|
jpayne@1
|
9140 <Iteration_iter-num>188</Iteration_iter-num>
|
jpayne@1
|
9141 <Iteration_query-ID>Query_188</Iteration_query-ID>
|
jpayne@1
|
9142 <Iteration_query-def>fliC_z38_Salmonella.enterica_Fresno_AY353487_z36,z38__1266</Iteration_query-def>
|
jpayne@1
|
9143 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
9144 <Iteration_hits>
|
jpayne@1
|
9145 <Hit>
|
jpayne@1
|
9146 <Hit_num>1</Hit_num>
|
jpayne@1
|
9147 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9148 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9149 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9150 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9151 <Hit_hsps>
|
jpayne@1
|
9152 <Hsp>
|
jpayne@1
|
9153 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9154 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
9155 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
9156 <Hsp_evalue>2.61243e-123</Hsp_evalue>
|
jpayne@1
|
9157 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9158 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
9159 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9160 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
9161 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9162 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9163 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
9164 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
9165 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9166 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
9167 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATCAACAACAACCTGCAGCGCGTGCGCGAACTGTCCGTCCAGGCAGCAAACGGCTCGAACTCTGATTCTGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAGCAAACCGATTTTAACGGGAAAAAAGTCTTAAGCCAGGATGGACAGTTGACCATTCAGGTTGGGGCGAATGACGGCGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
9168 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
9169 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||||||||| ||||||||||||||||| ||||| || |||| || ||||| | ||||| | ||||||||||| ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| |||||| | ||||| ||| ||| || |||||||| || || || || ||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
9170 </Hsp>
|
jpayne@1
|
9171 <Hsp>
|
jpayne@1
|
9172 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9173 <Hsp_bit-score>204.252</Hsp_bit-score>
|
jpayne@1
|
9174 <Hsp_score>110</Hsp_score>
|
jpayne@1
|
9175 <Hsp_evalue>2.22979e-54</Hsp_evalue>
|
jpayne@1
|
9176 <Hsp_query-from>1055</Hsp_query-from>
|
jpayne@1
|
9177 <Hsp_query-to>1266</Hsp_query-to>
|
jpayne@1
|
9178 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
9179 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9180 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9181 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9182 <Hsp_identity>178</Hsp_identity>
|
jpayne@1
|
9183 <Hsp_positive>178</Hsp_positive>
|
jpayne@1
|
9184 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9185 <Hsp_align-len>212</Hsp_align-len>
|
jpayne@1
|
9186 <Hsp_qseq>TGGGGGCGGTGCAGAACCGTTTTGAATCTGCCATCACTAACTTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGTGCGCAGATTCTGCAGCAGGCAGGGACGTCCGTACTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9187 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9188 <Hsp_midline>||||||| | || ||||||||||| || ||||| || ||| | ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| || || ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9189 </Hsp>
|
jpayne@1
|
9190 </Hit_hsps>
|
jpayne@1
|
9191 </Hit>
|
jpayne@1
|
9192 </Iteration_hits>
|
jpayne@1
|
9193 <Iteration_stat>
|
jpayne@1
|
9194 <Statistics>
|
jpayne@1
|
9195 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9196 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9197 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9198 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
9199 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9200 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9201 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9202 </Statistics>
|
jpayne@1
|
9203 </Iteration_stat>
|
jpayne@1
|
9204 </Iteration>
|
jpayne@1
|
9205 <Iteration>
|
jpayne@1
|
9206 <Iteration_iter-num>189</Iteration_iter-num>
|
jpayne@1
|
9207 <Iteration_query-ID>Query_189</Iteration_query-ID>
|
jpayne@1
|
9208 <Iteration_query-def>fliC_z38_Salmonella.enterica_Lille_AY353488_z36,z38__1266</Iteration_query-def>
|
jpayne@1
|
9209 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
9210 <Iteration_hits>
|
jpayne@1
|
9211 <Hit>
|
jpayne@1
|
9212 <Hit_num>1</Hit_num>
|
jpayne@1
|
9213 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9214 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9215 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9216 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9217 <Hit_hsps>
|
jpayne@1
|
9218 <Hsp>
|
jpayne@1
|
9219 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9220 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
9221 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
9222 <Hsp_evalue>2.61243e-123</Hsp_evalue>
|
jpayne@1
|
9223 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9224 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
9225 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9226 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
9227 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9228 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9229 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
9230 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
9231 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9232 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
9233 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATCAACAACAACCTGCAGCGCGTGCGCGAACTGTCCGTCCAGGCAGCAAACGGCTCGAACTCTGATTCTGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAGCAAACCGATTTTAACGGGAAAAAAGTCTTAAGCCAGGATGGACAGTTGACCATTCAGGTTGGGGCGAATGACGGCGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
9234 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
9235 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||||||||| ||||||||||||||||| ||||| || |||| || ||||| | ||||| | ||||||||||| ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| |||||| | ||||| ||| ||| || |||||||| || || || || ||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
9236 </Hsp>
|
jpayne@1
|
9237 <Hsp>
|
jpayne@1
|
9238 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9239 <Hsp_bit-score>209.792</Hsp_bit-score>
|
jpayne@1
|
9240 <Hsp_score>113</Hsp_score>
|
jpayne@1
|
9241 <Hsp_evalue>4.79263e-56</Hsp_evalue>
|
jpayne@1
|
9242 <Hsp_query-from>1055</Hsp_query-from>
|
jpayne@1
|
9243 <Hsp_query-to>1266</Hsp_query-to>
|
jpayne@1
|
9244 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
9245 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9246 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9247 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9248 <Hsp_identity>179</Hsp_identity>
|
jpayne@1
|
9249 <Hsp_positive>179</Hsp_positive>
|
jpayne@1
|
9250 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9251 <Hsp_align-len>212</Hsp_align-len>
|
jpayne@1
|
9252 <Hsp_qseq>TGGGGGCGGTGCAGAACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGTGCGCAGATTCTGCAGCAGGCAGGGACGTCCGTACTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9253 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9254 <Hsp_midline>||||||| | || ||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| || || ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9255 </Hsp>
|
jpayne@1
|
9256 </Hit_hsps>
|
jpayne@1
|
9257 </Hit>
|
jpayne@1
|
9258 </Iteration_hits>
|
jpayne@1
|
9259 <Iteration_stat>
|
jpayne@1
|
9260 <Statistics>
|
jpayne@1
|
9261 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9262 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9263 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9264 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
9265 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9266 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9267 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9268 </Statistics>
|
jpayne@1
|
9269 </Iteration_stat>
|
jpayne@1
|
9270 </Iteration>
|
jpayne@1
|
9271 <Iteration>
|
jpayne@1
|
9272 <Iteration_iter-num>190</Iteration_iter-num>
|
jpayne@1
|
9273 <Iteration_query-ID>Query_190</Iteration_query-ID>
|
jpayne@1
|
9274 <Iteration_query-def>fliC_z39_Salmonella.enterica_Grancanaria_AY353489_other.z39__1500</Iteration_query-def>
|
jpayne@1
|
9275 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
9276 <Iteration_hits>
|
jpayne@1
|
9277 <Hit>
|
jpayne@1
|
9278 <Hit_num>1</Hit_num>
|
jpayne@1
|
9279 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9280 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9281 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9282 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9283 <Hit_hsps>
|
jpayne@1
|
9284 <Hsp>
|
jpayne@1
|
9285 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9286 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
9287 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
9288 <Hsp_evalue>6.5742e-135</Hsp_evalue>
|
jpayne@1
|
9289 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9290 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
9291 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9292 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
9293 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9294 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9295 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
9296 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
9297 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
9298 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
9299 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGCACCGCTATCGAGCGTCTGTCCTCCGGTCTGCGTATCAACAGCGCGAAGGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAATGACGGTATTTCTATTGCGCAGACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
9300 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
9301 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
9302 </Hsp>
|
jpayne@1
|
9303 <Hsp>
|
jpayne@1
|
9304 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9305 <Hsp_bit-score>207.945</Hsp_bit-score>
|
jpayne@1
|
9306 <Hsp_score>112</Hsp_score>
|
jpayne@1
|
9307 <Hsp_evalue>2.04694e-55</Hsp_evalue>
|
jpayne@1
|
9308 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
9309 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
9310 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
9311 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9312 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9313 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9314 <Hsp_identity>209</Hsp_identity>
|
jpayne@1
|
9315 <Hsp_positive>209</Hsp_positive>
|
jpayne@1
|
9316 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
9317 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
9318 <Hsp_qseq>AATCGATGCTGCGCTGGCACAGGTGGATGCACTGCGTTCTGACCTGGGCGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACCTCCGTTCTGGCACAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9319 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9320 <Hsp_midline>||| ||| |||| || || | ||||| ||| | |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9321 </Hsp>
|
jpayne@1
|
9322 </Hit_hsps>
|
jpayne@1
|
9323 </Hit>
|
jpayne@1
|
9324 </Iteration_hits>
|
jpayne@1
|
9325 <Iteration_stat>
|
jpayne@1
|
9326 <Statistics>
|
jpayne@1
|
9327 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9328 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9329 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9330 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
9331 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9332 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9333 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9334 </Statistics>
|
jpayne@1
|
9335 </Iteration_stat>
|
jpayne@1
|
9336 </Iteration>
|
jpayne@1
|
9337 <Iteration>
|
jpayne@1
|
9338 <Iteration_iter-num>191</Iteration_iter-num>
|
jpayne@1
|
9339 <Iteration_query-ID>Query_191</Iteration_query-ID>
|
jpayne@1
|
9340 <Iteration_query-def>fliC_z39_Salmonella.enterica_Grancanaria_AY353490_other.z39__1500</Iteration_query-def>
|
jpayne@1
|
9341 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
9342 <Iteration_hits>
|
jpayne@1
|
9343 <Hit>
|
jpayne@1
|
9344 <Hit_num>1</Hit_num>
|
jpayne@1
|
9345 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9346 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9347 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9348 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9349 <Hit_hsps>
|
jpayne@1
|
9350 <Hsp>
|
jpayne@1
|
9351 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9352 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
9353 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
9354 <Hsp_evalue>6.5742e-135</Hsp_evalue>
|
jpayne@1
|
9355 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9356 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
9357 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9358 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
9359 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9360 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9361 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
9362 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
9363 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
9364 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
9365 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGCACCGCTATCGAGCGTCTGTCCTCCGGTCTGCGTATCAACAGCGCGAAGGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAATGACGGTATTTCTATTGCGCAGACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
9366 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
9367 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||| |||||||||||||| ||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
9368 </Hsp>
|
jpayne@1
|
9369 <Hsp>
|
jpayne@1
|
9370 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9371 <Hsp_bit-score>207.945</Hsp_bit-score>
|
jpayne@1
|
9372 <Hsp_score>112</Hsp_score>
|
jpayne@1
|
9373 <Hsp_evalue>2.04694e-55</Hsp_evalue>
|
jpayne@1
|
9374 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
9375 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
9376 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
9377 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9378 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9379 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9380 <Hsp_identity>209</Hsp_identity>
|
jpayne@1
|
9381 <Hsp_positive>209</Hsp_positive>
|
jpayne@1
|
9382 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
9383 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
9384 <Hsp_qseq>AATCGATGCTGCGCTGGCACAGGTGGATGCACTGCGTTCTGACCTGGGCGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACCTCCGTTCTGGCACAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9385 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9386 <Hsp_midline>||| ||| |||| || || | ||||| ||| | |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| || || ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9387 </Hsp>
|
jpayne@1
|
9388 </Hit_hsps>
|
jpayne@1
|
9389 </Hit>
|
jpayne@1
|
9390 </Iteration_hits>
|
jpayne@1
|
9391 <Iteration_stat>
|
jpayne@1
|
9392 <Statistics>
|
jpayne@1
|
9393 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9394 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9395 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9396 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
9397 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9398 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9399 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9400 </Statistics>
|
jpayne@1
|
9401 </Iteration_stat>
|
jpayne@1
|
9402 </Iteration>
|
jpayne@1
|
9403 <Iteration>
|
jpayne@1
|
9404 <Iteration_iter-num>192</Iteration_iter-num>
|
jpayne@1
|
9405 <Iteration_query-ID>Query_192</Iteration_query-ID>
|
jpayne@1
|
9406 <Iteration_query-def>fliC_z39_Salmonella.enterica_IIIb.6,7:z39:1,2_AY353491_other.z39__1500</Iteration_query-def>
|
jpayne@1
|
9407 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
9408 <Iteration_hits>
|
jpayne@1
|
9409 <Hit>
|
jpayne@1
|
9410 <Hit_num>1</Hit_num>
|
jpayne@1
|
9411 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9412 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9413 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9414 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9415 <Hit_hsps>
|
jpayne@1
|
9416 <Hsp>
|
jpayne@1
|
9417 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9418 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
9419 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
9420 <Hsp_evalue>6.48183e-145</Hsp_evalue>
|
jpayne@1
|
9421 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9422 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
9423 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9424 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
9425 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9426 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9427 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
9428 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
9429 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
9430 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
9431 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAGGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCACAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
9432 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
9433 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
9434 </Hsp>
|
jpayne@1
|
9435 <Hsp>
|
jpayne@1
|
9436 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9437 <Hsp_bit-score>195.019</Hsp_bit-score>
|
jpayne@1
|
9438 <Hsp_score>105</Hsp_score>
|
jpayne@1
|
9439 <Hsp_evalue>1.59361e-51</Hsp_evalue>
|
jpayne@1
|
9440 <Hsp_query-from>1303</Hsp_query-from>
|
jpayne@1
|
9441 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
9442 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
9443 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9444 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9445 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9446 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
9447 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
9448 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
9449 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
9450 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTGAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9451 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9452 <Hsp_midline>|||||||| | || || || |||||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9453 </Hsp>
|
jpayne@1
|
9454 </Hit_hsps>
|
jpayne@1
|
9455 </Hit>
|
jpayne@1
|
9456 </Iteration_hits>
|
jpayne@1
|
9457 <Iteration_stat>
|
jpayne@1
|
9458 <Statistics>
|
jpayne@1
|
9459 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9460 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9461 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9462 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
9463 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9464 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9465 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9466 </Statistics>
|
jpayne@1
|
9467 </Iteration_stat>
|
jpayne@1
|
9468 </Iteration>
|
jpayne@1
|
9469 <Iteration>
|
jpayne@1
|
9470 <Iteration_iter-num>193</Iteration_iter-num>
|
jpayne@1
|
9471 <Iteration_query-ID>Query_193</Iteration_query-ID>
|
jpayne@1
|
9472 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_IV.1,40:z4,z23:-_AY353492_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
9473 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
9474 <Iteration_hits>
|
jpayne@1
|
9475 <Hit>
|
jpayne@1
|
9476 <Hit_num>1</Hit_num>
|
jpayne@1
|
9477 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9478 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9479 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9480 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9481 <Hit_hsps>
|
jpayne@1
|
9482 <Hsp>
|
jpayne@1
|
9483 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9484 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
9485 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
9486 <Hsp_evalue>5.62855e-125</Hsp_evalue>
|
jpayne@1
|
9487 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9488 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
9489 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9490 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
9491 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9492 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9493 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
9494 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
9495 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9496 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
9497 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCAAACGACGGTATTTCCATTGCGCAGACGACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCGAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACTGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGCGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
9498 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
9499 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || ||| | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || || ||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
9500 </Hsp>
|
jpayne@1
|
9501 <Hsp>
|
jpayne@1
|
9502 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9503 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
9504 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
9505 <Hsp_evalue>2.89136e-53</Hsp_evalue>
|
jpayne@1
|
9506 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
9507 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
9508 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
9509 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9510 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9511 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9512 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
9513 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
9514 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9515 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
9516 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCTGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9517 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9518 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9519 </Hsp>
|
jpayne@1
|
9520 </Hit_hsps>
|
jpayne@1
|
9521 </Hit>
|
jpayne@1
|
9522 </Iteration_hits>
|
jpayne@1
|
9523 <Iteration_stat>
|
jpayne@1
|
9524 <Statistics>
|
jpayne@1
|
9525 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9526 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9527 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9528 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
9529 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9530 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9531 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9532 </Statistics>
|
jpayne@1
|
9533 </Iteration_stat>
|
jpayne@1
|
9534 </Iteration>
|
jpayne@1
|
9535 <Iteration>
|
jpayne@1
|
9536 <Iteration_iter-num>194</Iteration_iter-num>
|
jpayne@1
|
9537 <Iteration_query-ID>Query_194</Iteration_query-ID>
|
jpayne@1
|
9538 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_Ajiobo_AY353493_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
9539 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
9540 <Iteration_hits>
|
jpayne@1
|
9541 <Hit>
|
jpayne@1
|
9542 <Hit_num>1</Hit_num>
|
jpayne@1
|
9543 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9544 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9545 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9546 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9547 <Hit_hsps>
|
jpayne@1
|
9548 <Hsp>
|
jpayne@1
|
9549 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9550 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
9551 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
9552 <Hsp_evalue>4.35114e-126</Hsp_evalue>
|
jpayne@1
|
9553 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9554 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
9555 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9556 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
9557 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9558 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9559 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
9560 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
9561 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9562 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
9563 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
9564 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
9565 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
9566 </Hsp>
|
jpayne@1
|
9567 <Hsp>
|
jpayne@1
|
9568 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9569 <Hsp_bit-score>209.792</Hsp_bit-score>
|
jpayne@1
|
9570 <Hsp_score>113</Hsp_score>
|
jpayne@1
|
9571 <Hsp_evalue>4.80415e-56</Hsp_evalue>
|
jpayne@1
|
9572 <Hsp_query-from>1058</Hsp_query-from>
|
jpayne@1
|
9573 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
9574 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
9575 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9576 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9577 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9578 <Hsp_identity>179</Hsp_identity>
|
jpayne@1
|
9579 <Hsp_positive>179</Hsp_positive>
|
jpayne@1
|
9580 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9581 <Hsp_align-len>212</Hsp_align-len>
|
jpayne@1
|
9582 <Hsp_qseq>TGGGGGCGGTGCAGAACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGTGCGCAGATTCTGCAGCAGGCAGGGACGTCCGTACTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9583 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9584 <Hsp_midline>||||||| | || ||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| || || ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9585 </Hsp>
|
jpayne@1
|
9586 </Hit_hsps>
|
jpayne@1
|
9587 </Hit>
|
jpayne@1
|
9588 </Iteration_hits>
|
jpayne@1
|
9589 <Iteration_stat>
|
jpayne@1
|
9590 <Statistics>
|
jpayne@1
|
9591 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9592 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9593 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9594 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
9595 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9596 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9597 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9598 </Statistics>
|
jpayne@1
|
9599 </Iteration_stat>
|
jpayne@1
|
9600 </Iteration>
|
jpayne@1
|
9601 <Iteration>
|
jpayne@1
|
9602 <Iteration_iter-num>195</Iteration_iter-num>
|
jpayne@1
|
9603 <Iteration_query-ID>Query_195</Iteration_query-ID>
|
jpayne@1
|
9604 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_Ekotedo_AY353494_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
9605 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
9606 <Iteration_hits>
|
jpayne@1
|
9607 <Hit>
|
jpayne@1
|
9608 <Hit_num>1</Hit_num>
|
jpayne@1
|
9609 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9610 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9611 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9612 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9613 <Hit_hsps>
|
jpayne@1
|
9614 <Hsp>
|
jpayne@1
|
9615 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9616 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
9617 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
9618 <Hsp_evalue>4.35114e-126</Hsp_evalue>
|
jpayne@1
|
9619 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9620 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
9621 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9622 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
9623 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9624 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9625 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
9626 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
9627 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9628 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
9629 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
9630 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
9631 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
9632 </Hsp>
|
jpayne@1
|
9633 <Hsp>
|
jpayne@1
|
9634 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9635 <Hsp_bit-score>209.792</Hsp_bit-score>
|
jpayne@1
|
9636 <Hsp_score>113</Hsp_score>
|
jpayne@1
|
9637 <Hsp_evalue>4.80415e-56</Hsp_evalue>
|
jpayne@1
|
9638 <Hsp_query-from>1058</Hsp_query-from>
|
jpayne@1
|
9639 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
9640 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
9641 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9642 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9643 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9644 <Hsp_identity>179</Hsp_identity>
|
jpayne@1
|
9645 <Hsp_positive>179</Hsp_positive>
|
jpayne@1
|
9646 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9647 <Hsp_align-len>212</Hsp_align-len>
|
jpayne@1
|
9648 <Hsp_qseq>TGGGGGCGGTGCAGAACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGTGCGCAGATTCTGCAGCAGGCAGGGACGTCCGTACTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9649 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9650 <Hsp_midline>||||||| | || ||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| || || ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9651 </Hsp>
|
jpayne@1
|
9652 </Hit_hsps>
|
jpayne@1
|
9653 </Hit>
|
jpayne@1
|
9654 </Iteration_hits>
|
jpayne@1
|
9655 <Iteration_stat>
|
jpayne@1
|
9656 <Statistics>
|
jpayne@1
|
9657 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9658 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9659 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9660 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
9661 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9662 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9663 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9664 </Statistics>
|
jpayne@1
|
9665 </Iteration_stat>
|
jpayne@1
|
9666 </Iteration>
|
jpayne@1
|
9667 <Iteration>
|
jpayne@1
|
9668 <Iteration_iter-num>196</Iteration_iter-num>
|
jpayne@1
|
9669 <Iteration_query-ID>Query_196</Iteration_query-ID>
|
jpayne@1
|
9670 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_IIIa.43:z4,z23:-_AY353495_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
9671 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
9672 <Iteration_hits>
|
jpayne@1
|
9673 <Hit>
|
jpayne@1
|
9674 <Hit_num>1</Hit_num>
|
jpayne@1
|
9675 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9676 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9677 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9678 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9679 <Hit_hsps>
|
jpayne@1
|
9680 <Hsp>
|
jpayne@1
|
9681 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9682 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
9683 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
9684 <Hsp_evalue>2.61871e-123</Hsp_evalue>
|
jpayne@1
|
9685 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9686 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
9687 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9688 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
9689 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9690 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9691 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
9692 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
9693 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9694 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
9695 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACGACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCGAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACTGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGCGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
9696 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
9697 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || ||| | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || || ||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
9698 </Hsp>
|
jpayne@1
|
9699 <Hsp>
|
jpayne@1
|
9700 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9701 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
9702 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
9703 <Hsp_evalue>2.89136e-53</Hsp_evalue>
|
jpayne@1
|
9704 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
9705 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
9706 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
9707 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9708 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9709 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9710 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
9711 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
9712 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9713 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
9714 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCTGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9715 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9716 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9717 </Hsp>
|
jpayne@1
|
9718 </Hit_hsps>
|
jpayne@1
|
9719 </Hit>
|
jpayne@1
|
9720 </Iteration_hits>
|
jpayne@1
|
9721 <Iteration_stat>
|
jpayne@1
|
9722 <Statistics>
|
jpayne@1
|
9723 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9724 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9725 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9726 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
9727 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9728 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9729 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9730 </Statistics>
|
jpayne@1
|
9731 </Iteration_stat>
|
jpayne@1
|
9732 </Iteration>
|
jpayne@1
|
9733 <Iteration>
|
jpayne@1
|
9734 <Iteration_iter-num>197</Iteration_iter-num>
|
jpayne@1
|
9735 <Iteration_query-ID>Query_197</Iteration_query-ID>
|
jpayne@1
|
9736 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_IIIa.40:z4,z23:-_AY353496_z4,z23__1242</Iteration_query-def>
|
jpayne@1
|
9737 <Iteration_query-len>1242</Iteration_query-len>
|
jpayne@1
|
9738 <Iteration_hits>
|
jpayne@1
|
9739 <Hit>
|
jpayne@1
|
9740 <Hit_num>1</Hit_num>
|
jpayne@1
|
9741 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9742 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9743 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9744 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9745 <Hit_hsps>
|
jpayne@1
|
9746 <Hsp>
|
jpayne@1
|
9747 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9748 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
9749 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
9750 <Hsp_evalue>2.56219e-123</Hsp_evalue>
|
jpayne@1
|
9751 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9752 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
9753 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9754 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
9755 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9756 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9757 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
9758 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
9759 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9760 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
9761 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGTGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATTGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
9762 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
9763 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| | ||||||| |||||||| || || ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| ||||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
9764 </Hsp>
|
jpayne@1
|
9765 </Hit_hsps>
|
jpayne@1
|
9766 </Hit>
|
jpayne@1
|
9767 </Iteration_hits>
|
jpayne@1
|
9768 <Iteration_stat>
|
jpayne@1
|
9769 <Statistics>
|
jpayne@1
|
9770 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9771 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9772 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9773 <Statistics_eff-space>66947904</Statistics_eff-space>
|
jpayne@1
|
9774 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9775 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9776 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9777 </Statistics>
|
jpayne@1
|
9778 </Iteration_stat>
|
jpayne@1
|
9779 </Iteration>
|
jpayne@1
|
9780 <Iteration>
|
jpayne@1
|
9781 <Iteration_iter-num>198</Iteration_iter-num>
|
jpayne@1
|
9782 <Iteration_query-ID>Query_198</Iteration_query-ID>
|
jpayne@1
|
9783 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_IIIa.44:z4,z23:-_AY353497_z4,z23__1275</Iteration_query-def>
|
jpayne@1
|
9784 <Iteration_query-len>1275</Iteration_query-len>
|
jpayne@1
|
9785 <Iteration_hits>
|
jpayne@1
|
9786 <Hit>
|
jpayne@1
|
9787 <Hit_num>1</Hit_num>
|
jpayne@1
|
9788 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9789 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9790 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9791 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9792 <Hit_hsps>
|
jpayne@1
|
9793 <Hsp>
|
jpayne@1
|
9794 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9795 <Hsp_bit-score>411.077</Hsp_bit-score>
|
jpayne@1
|
9796 <Hsp_score>222</Hsp_score>
|
jpayne@1
|
9797 <Hsp_evalue>1.2329e-116</Hsp_evalue>
|
jpayne@1
|
9798 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9799 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
9800 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9801 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
9802 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9803 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9804 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
9805 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
9806 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9807 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
9808 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
9809 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
9810 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||| ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
9811 </Hsp>
|
jpayne@1
|
9812 <Hsp>
|
jpayne@1
|
9813 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9814 <Hsp_bit-score>228.258</Hsp_bit-score>
|
jpayne@1
|
9815 <Hsp_score>123</Hsp_score>
|
jpayne@1
|
9816 <Hsp_evalue>1.33268e-61</Hsp_evalue>
|
jpayne@1
|
9817 <Hsp_query-from>1078</Hsp_query-from>
|
jpayne@1
|
9818 <Hsp_query-to>1275</Hsp_query-to>
|
jpayne@1
|
9819 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
9820 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9821 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9822 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9823 <Hsp_identity>173</Hsp_identity>
|
jpayne@1
|
9824 <Hsp_positive>173</Hsp_positive>
|
jpayne@1
|
9825 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9826 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
9827 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACGGTAAATAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9828 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9829 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| ||||||| || ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9830 </Hsp>
|
jpayne@1
|
9831 </Hit_hsps>
|
jpayne@1
|
9832 </Hit>
|
jpayne@1
|
9833 </Iteration_hits>
|
jpayne@1
|
9834 <Iteration_stat>
|
jpayne@1
|
9835 <Statistics>
|
jpayne@1
|
9836 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9837 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9838 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9839 <Statistics_eff-space>68752872</Statistics_eff-space>
|
jpayne@1
|
9840 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9841 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9842 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9843 </Statistics>
|
jpayne@1
|
9844 </Iteration_stat>
|
jpayne@1
|
9845 </Iteration>
|
jpayne@1
|
9846 <Iteration>
|
jpayne@1
|
9847 <Iteration_iter-num>199</Iteration_iter-num>
|
jpayne@1
|
9848 <Iteration_query-ID>Query_199</Iteration_query-ID>
|
jpayne@1
|
9849 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_Gera_AY353498_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
9850 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
9851 <Iteration_hits>
|
jpayne@1
|
9852 <Hit>
|
jpayne@1
|
9853 <Hit_num>1</Hit_num>
|
jpayne@1
|
9854 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9855 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9856 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9857 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9858 <Hit_hsps>
|
jpayne@1
|
9859 <Hsp>
|
jpayne@1
|
9860 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9861 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
9862 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
9863 <Hsp_evalue>4.35114e-126</Hsp_evalue>
|
jpayne@1
|
9864 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9865 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
9866 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9867 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
9868 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9869 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9870 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
9871 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
9872 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9873 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
9874 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
9875 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
9876 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
9877 </Hsp>
|
jpayne@1
|
9878 <Hsp>
|
jpayne@1
|
9879 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9880 <Hsp_bit-score>211.638</Hsp_bit-score>
|
jpayne@1
|
9881 <Hsp_score>114</Hsp_score>
|
jpayne@1
|
9882 <Hsp_evalue>1.33573e-56</Hsp_evalue>
|
jpayne@1
|
9883 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
9884 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
9885 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
9886 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9887 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9888 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9889 <Hsp_identity>170</Hsp_identity>
|
jpayne@1
|
9890 <Hsp_positive>170</Hsp_positive>
|
jpayne@1
|
9891 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9892 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
9893 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACTTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9894 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9895 <Hsp_midline>||||||||||| || ||||| || ||| | ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9896 </Hsp>
|
jpayne@1
|
9897 </Hit_hsps>
|
jpayne@1
|
9898 </Hit>
|
jpayne@1
|
9899 </Iteration_hits>
|
jpayne@1
|
9900 <Iteration_stat>
|
jpayne@1
|
9901 <Statistics>
|
jpayne@1
|
9902 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9903 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9904 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9905 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
9906 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9907 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9908 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9909 </Statistics>
|
jpayne@1
|
9910 </Iteration_stat>
|
jpayne@1
|
9911 </Iteration>
|
jpayne@1
|
9912 <Iteration>
|
jpayne@1
|
9913 <Iteration_iter-num>200</Iteration_iter-num>
|
jpayne@1
|
9914 <Iteration_query-ID>Query_200</Iteration_query-ID>
|
jpayne@1
|
9915 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_IV.38:z4,z23:-_AY353499_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
9916 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
9917 <Iteration_hits>
|
jpayne@1
|
9918 <Hit>
|
jpayne@1
|
9919 <Hit_num>1</Hit_num>
|
jpayne@1
|
9920 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9921 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9922 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9923 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9924 <Hit_hsps>
|
jpayne@1
|
9925 <Hsp>
|
jpayne@1
|
9926 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9927 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
9928 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
9929 <Hsp_evalue>2.61871e-123</Hsp_evalue>
|
jpayne@1
|
9930 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9931 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
9932 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9933 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
9934 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9935 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9936 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
9937 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
9938 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9939 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
9940 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACGACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCGAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACTGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGCGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
9941 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
9942 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || ||| | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || || ||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
9943 </Hsp>
|
jpayne@1
|
9944 <Hsp>
|
jpayne@1
|
9945 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
9946 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
9947 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
9948 <Hsp_evalue>2.89136e-53</Hsp_evalue>
|
jpayne@1
|
9949 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
9950 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
9951 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
9952 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
9953 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
9954 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
9955 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
9956 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
9957 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
9958 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
9959 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCTGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
9960 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
9961 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
9962 </Hsp>
|
jpayne@1
|
9963 </Hit_hsps>
|
jpayne@1
|
9964 </Hit>
|
jpayne@1
|
9965 </Iteration_hits>
|
jpayne@1
|
9966 <Iteration_stat>
|
jpayne@1
|
9967 <Statistics>
|
jpayne@1
|
9968 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
9969 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
9970 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
9971 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
9972 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
9973 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
9974 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
9975 </Statistics>
|
jpayne@1
|
9976 </Iteration_stat>
|
jpayne@1
|
9977 </Iteration>
|
jpayne@1
|
9978 <Iteration>
|
jpayne@1
|
9979 <Iteration_iter-num>201</Iteration_iter-num>
|
jpayne@1
|
9980 <Iteration_query-ID>Query_201</Iteration_query-ID>
|
jpayne@1
|
9981 <Iteration_query-def>fliC_z4,z23,z32_Salmonella.enterica_IIIa.13,23:z4,z23,z32:-_AY353500_z4,z23__1266</Iteration_query-def>
|
jpayne@1
|
9982 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
9983 <Iteration_hits>
|
jpayne@1
|
9984 <Hit>
|
jpayne@1
|
9985 <Hit_num>1</Hit_num>
|
jpayne@1
|
9986 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
9987 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
9988 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
9989 <Hit_len>1962</Hit_len>
|
jpayne@1
|
9990 <Hit_hsps>
|
jpayne@1
|
9991 <Hsp>
|
jpayne@1
|
9992 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
9993 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
9994 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
9995 <Hsp_evalue>1.20688e-126</Hsp_evalue>
|
jpayne@1
|
9996 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
9997 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
9998 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
9999 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
10000 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10001 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10002 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
10003 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
10004 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10005 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
10006 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATTGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
10007 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
10008 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| ||||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
10009 </Hsp>
|
jpayne@1
|
10010 </Hit_hsps>
|
jpayne@1
|
10011 </Hit>
|
jpayne@1
|
10012 </Iteration_hits>
|
jpayne@1
|
10013 <Iteration_stat>
|
jpayne@1
|
10014 <Statistics>
|
jpayne@1
|
10015 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10016 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10017 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10018 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
10019 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10020 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10021 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10022 </Statistics>
|
jpayne@1
|
10023 </Iteration_stat>
|
jpayne@1
|
10024 </Iteration>
|
jpayne@1
|
10025 <Iteration>
|
jpayne@1
|
10026 <Iteration_iter-num>202</Iteration_iter-num>
|
jpayne@1
|
10027 <Iteration_query-ID>Query_202</Iteration_query-ID>
|
jpayne@1
|
10028 <Iteration_query-def>fliC_z4,z23,z32_Salmonella.enterica_IIIa.56:z4,z23,z32:-_AY353501_z4,z23__1266</Iteration_query-def>
|
jpayne@1
|
10029 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
10030 <Iteration_hits>
|
jpayne@1
|
10031 <Hit>
|
jpayne@1
|
10032 <Hit_num>1</Hit_num>
|
jpayne@1
|
10033 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10034 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10035 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10036 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10037 <Hit_hsps>
|
jpayne@1
|
10038 <Hsp>
|
jpayne@1
|
10039 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10040 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
10041 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
10042 <Hsp_evalue>1.20688e-126</Hsp_evalue>
|
jpayne@1
|
10043 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10044 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
10045 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10046 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
10047 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10048 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10049 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
10050 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
10051 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10052 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
10053 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATTGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
10054 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
10055 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| ||||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
10056 </Hsp>
|
jpayne@1
|
10057 </Hit_hsps>
|
jpayne@1
|
10058 </Hit>
|
jpayne@1
|
10059 </Iteration_hits>
|
jpayne@1
|
10060 <Iteration_stat>
|
jpayne@1
|
10061 <Statistics>
|
jpayne@1
|
10062 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10063 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10064 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10065 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
10066 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10067 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10068 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10069 </Statistics>
|
jpayne@1
|
10070 </Iteration_stat>
|
jpayne@1
|
10071 </Iteration>
|
jpayne@1
|
10072 <Iteration>
|
jpayne@1
|
10073 <Iteration_iter-num>203</Iteration_iter-num>
|
jpayne@1
|
10074 <Iteration_query-ID>Query_203</Iteration_query-ID>
|
jpayne@1
|
10075 <Iteration_query-def>fliC_z4,z23,z32_Salmonella.enterica_IIIa.44:z4,z23,z32:-_AY353502_z4,z23__1266</Iteration_query-def>
|
jpayne@1
|
10076 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
10077 <Iteration_hits>
|
jpayne@1
|
10078 <Hit>
|
jpayne@1
|
10079 <Hit_num>1</Hit_num>
|
jpayne@1
|
10080 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10081 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10082 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10083 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10084 <Hit_hsps>
|
jpayne@1
|
10085 <Hsp>
|
jpayne@1
|
10086 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10087 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
10088 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
10089 <Hsp_evalue>5.61505e-125</Hsp_evalue>
|
jpayne@1
|
10090 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10091 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
10092 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10093 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
10094 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10095 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10096 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
10097 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
10098 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10099 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
10100 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGTTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATTGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
10101 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
10102 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| |||||||||| |||||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| ||||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
10103 </Hsp>
|
jpayne@1
|
10104 </Hit_hsps>
|
jpayne@1
|
10105 </Hit>
|
jpayne@1
|
10106 </Iteration_hits>
|
jpayne@1
|
10107 <Iteration_stat>
|
jpayne@1
|
10108 <Statistics>
|
jpayne@1
|
10109 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10110 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10111 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10112 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
10113 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10114 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10115 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10116 </Statistics>
|
jpayne@1
|
10117 </Iteration_stat>
|
jpayne@1
|
10118 </Iteration>
|
jpayne@1
|
10119 <Iteration>
|
jpayne@1
|
10120 <Iteration_iter-num>204</Iteration_iter-num>
|
jpayne@1
|
10121 <Iteration_query-ID>Query_204</Iteration_query-ID>
|
jpayne@1
|
10122 <Iteration_query-def>fliC_z4,z24_Salmonella.enterica_Romanby_AY353503_z4,z23__1281</Iteration_query-def>
|
jpayne@1
|
10123 <Iteration_query-len>1281</Iteration_query-len>
|
jpayne@1
|
10124 <Iteration_hits>
|
jpayne@1
|
10125 <Hit>
|
jpayne@1
|
10126 <Hit_num>1</Hit_num>
|
jpayne@1
|
10127 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10128 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10129 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10130 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10131 <Hit_hsps>
|
jpayne@1
|
10132 <Hsp>
|
jpayne@1
|
10133 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10134 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
10135 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
10136 <Hsp_evalue>4.39287e-126</Hsp_evalue>
|
jpayne@1
|
10137 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10138 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
10139 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10140 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
10141 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10142 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10143 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
10144 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
10145 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10146 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
10147 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
10148 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
10149 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
10150 </Hsp>
|
jpayne@1
|
10151 <Hsp>
|
jpayne@1
|
10152 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10153 <Hsp_bit-score>231.952</Hsp_bit-score>
|
jpayne@1
|
10154 <Hsp_score>125</Hsp_score>
|
jpayne@1
|
10155 <Hsp_evalue>1.03514e-62</Hsp_evalue>
|
jpayne@1
|
10156 <Hsp_query-from>1070</Hsp_query-from>
|
jpayne@1
|
10157 <Hsp_query-to>1281</Hsp_query-to>
|
jpayne@1
|
10158 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
10159 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10160 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10161 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10162 <Hsp_identity>183</Hsp_identity>
|
jpayne@1
|
10163 <Hsp_positive>183</Hsp_positive>
|
jpayne@1
|
10164 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10165 <Hsp_align-len>212</Hsp_align-len>
|
jpayne@1
|
10166 <Hsp_qseq>TGGGGGCGGTGCAGAACCGTTTTGAATCTGCTATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10167 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10168 <Hsp_midline>||||||| | || ||||||||||| || || || || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10169 </Hsp>
|
jpayne@1
|
10170 </Hit_hsps>
|
jpayne@1
|
10171 </Hit>
|
jpayne@1
|
10172 </Iteration_hits>
|
jpayne@1
|
10173 <Iteration_stat>
|
jpayne@1
|
10174 <Statistics>
|
jpayne@1
|
10175 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10176 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10177 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10178 <Statistics_eff-space>69081048</Statistics_eff-space>
|
jpayne@1
|
10179 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10180 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10181 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10182 </Statistics>
|
jpayne@1
|
10183 </Iteration_stat>
|
jpayne@1
|
10184 </Iteration>
|
jpayne@1
|
10185 <Iteration>
|
jpayne@1
|
10186 <Iteration_iter-num>205</Iteration_iter-num>
|
jpayne@1
|
10187 <Iteration_query-ID>Query_205</Iteration_query-ID>
|
jpayne@1
|
10188 <Iteration_query-def>fliC_z4,z24_Salmonella.enterica_II.1,9,12,46,27:z4,z24:1,5_AY353504_z4,z23__1281</Iteration_query-def>
|
jpayne@1
|
10189 <Iteration_query-len>1281</Iteration_query-len>
|
jpayne@1
|
10190 <Iteration_hits>
|
jpayne@1
|
10191 <Hit>
|
jpayne@1
|
10192 <Hit_num>1</Hit_num>
|
jpayne@1
|
10193 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10194 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10195 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10196 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10197 <Hit_hsps>
|
jpayne@1
|
10198 <Hsp>
|
jpayne@1
|
10199 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10200 <Hsp_bit-score>436.93</Hsp_bit-score>
|
jpayne@1
|
10201 <Hsp_score>236</Hsp_score>
|
jpayne@1
|
10202 <Hsp_evalue>2.04381e-124</Hsp_evalue>
|
jpayne@1
|
10203 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10204 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
10205 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10206 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
10207 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10208 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10209 <Hsp_identity>324</Hsp_identity>
|
jpayne@1
|
10210 <Hsp_positive>324</Hsp_positive>
|
jpayne@1
|
10211 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10212 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
10213 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGTTGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
10214 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
10215 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||| ||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
10216 </Hsp>
|
jpayne@1
|
10217 <Hsp>
|
jpayne@1
|
10218 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10219 <Hsp_bit-score>215.332</Hsp_bit-score>
|
jpayne@1
|
10220 <Hsp_score>116</Hsp_score>
|
jpayne@1
|
10221 <Hsp_evalue>1.04249e-57</Hsp_evalue>
|
jpayne@1
|
10222 <Hsp_query-from>1070</Hsp_query-from>
|
jpayne@1
|
10223 <Hsp_query-to>1281</Hsp_query-to>
|
jpayne@1
|
10224 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
10225 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10226 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10227 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10228 <Hsp_identity>180</Hsp_identity>
|
jpayne@1
|
10229 <Hsp_positive>180</Hsp_positive>
|
jpayne@1
|
10230 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10231 <Hsp_align-len>212</Hsp_align-len>
|
jpayne@1
|
10232 <Hsp_qseq>TGGGGGCGGTGCAGAACCGTTTTGAATCTGCTATCACTAACTTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10233 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10234 <Hsp_midline>||||||| | || ||||||||||| || || || || ||| | ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10235 </Hsp>
|
jpayne@1
|
10236 </Hit_hsps>
|
jpayne@1
|
10237 </Hit>
|
jpayne@1
|
10238 </Iteration_hits>
|
jpayne@1
|
10239 <Iteration_stat>
|
jpayne@1
|
10240 <Statistics>
|
jpayne@1
|
10241 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10242 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10243 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10244 <Statistics_eff-space>69081048</Statistics_eff-space>
|
jpayne@1
|
10245 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10246 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10247 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10248 </Statistics>
|
jpayne@1
|
10249 </Iteration_stat>
|
jpayne@1
|
10250 </Iteration>
|
jpayne@1
|
10251 <Iteration>
|
jpayne@1
|
10252 <Iteration_iter-num>206</Iteration_iter-num>
|
jpayne@1
|
10253 <Iteration_query-ID>Query_206</Iteration_query-ID>
|
jpayne@1
|
10254 <Iteration_query-def>fliC_z4,z24_Salmonella.enterica_IIIa.53:z4,z24:-_AY353505_z4,z23__1281</Iteration_query-def>
|
jpayne@1
|
10255 <Iteration_query-len>1281</Iteration_query-len>
|
jpayne@1
|
10256 <Iteration_hits>
|
jpayne@1
|
10257 <Hit>
|
jpayne@1
|
10258 <Hit_num>1</Hit_num>
|
jpayne@1
|
10259 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10260 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10261 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10262 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10263 <Hit_hsps>
|
jpayne@1
|
10264 <Hsp>
|
jpayne@1
|
10265 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10266 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
10267 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
10268 <Hsp_evalue>2.64383e-123</Hsp_evalue>
|
jpayne@1
|
10269 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10270 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
10271 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10272 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
10273 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10274 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10275 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
10276 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
10277 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10278 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
10279 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTAGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
10280 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
10281 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | || | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
10282 </Hsp>
|
jpayne@1
|
10283 <Hsp>
|
jpayne@1
|
10284 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10285 <Hsp_bit-score>233.798</Hsp_bit-score>
|
jpayne@1
|
10286 <Hsp_score>126</Hsp_score>
|
jpayne@1
|
10287 <Hsp_evalue>2.87808e-63</Hsp_evalue>
|
jpayne@1
|
10288 <Hsp_query-from>1084</Hsp_query-from>
|
jpayne@1
|
10289 <Hsp_query-to>1281</Hsp_query-to>
|
jpayne@1
|
10290 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
10291 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10292 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10293 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10294 <Hsp_identity>174</Hsp_identity>
|
jpayne@1
|
10295 <Hsp_positive>174</Hsp_positive>
|
jpayne@1
|
10296 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10297 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
10298 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACGGTAAATAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCTAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10299 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10300 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| ||||||| || ||| || || |||||||||||||||||| | |||||||| || ||||||||||| |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10301 </Hsp>
|
jpayne@1
|
10302 </Hit_hsps>
|
jpayne@1
|
10303 </Hit>
|
jpayne@1
|
10304 </Iteration_hits>
|
jpayne@1
|
10305 <Iteration_stat>
|
jpayne@1
|
10306 <Statistics>
|
jpayne@1
|
10307 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10308 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10309 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10310 <Statistics_eff-space>69081048</Statistics_eff-space>
|
jpayne@1
|
10311 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10312 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10313 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10314 </Statistics>
|
jpayne@1
|
10315 </Iteration_stat>
|
jpayne@1
|
10316 </Iteration>
|
jpayne@1
|
10317 <Iteration>
|
jpayne@1
|
10318 <Iteration_iter-num>207</Iteration_iter-num>
|
jpayne@1
|
10319 <Iteration_query-ID>Query_207</Iteration_query-ID>
|
jpayne@1
|
10320 <Iteration_query-def>fliC_z4,z32_Salmonella.enterica_IV.44:z4z32:-_AY353506_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
10321 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
10322 <Iteration_hits>
|
jpayne@1
|
10323 <Hit>
|
jpayne@1
|
10324 <Hit_num>1</Hit_num>
|
jpayne@1
|
10325 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10326 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10327 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10328 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10329 <Hit_hsps>
|
jpayne@1
|
10330 <Hsp>
|
jpayne@1
|
10331 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10332 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
10333 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
10334 <Hsp_evalue>1.20978e-126</Hsp_evalue>
|
jpayne@1
|
10335 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10336 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
10337 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10338 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
10339 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10340 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10341 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
10342 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
10343 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10344 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
10345 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCAAACGACGGTATTTCCATTGCGCAGACGACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCGAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACTGATTTTAACGGTAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGCGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
10346 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
10347 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || ||| | ||||||||| ||||| | ||||| ||| ||| || |||||||| || || || || ||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
10348 </Hsp>
|
jpayne@1
|
10349 <Hsp>
|
jpayne@1
|
10350 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10351 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
10352 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
10353 <Hsp_evalue>2.89136e-53</Hsp_evalue>
|
jpayne@1
|
10354 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
10355 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
10356 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
10357 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10358 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10359 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10360 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
10361 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
10362 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10363 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
10364 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCTGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10365 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10366 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10367 </Hsp>
|
jpayne@1
|
10368 </Hit_hsps>
|
jpayne@1
|
10369 </Hit>
|
jpayne@1
|
10370 </Iteration_hits>
|
jpayne@1
|
10371 <Iteration_stat>
|
jpayne@1
|
10372 <Statistics>
|
jpayne@1
|
10373 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10374 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10375 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10376 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
10377 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10378 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10379 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10380 </Statistics>
|
jpayne@1
|
10381 </Iteration_stat>
|
jpayne@1
|
10382 </Iteration>
|
jpayne@1
|
10383 <Iteration>
|
jpayne@1
|
10384 <Iteration_iter-num>208</Iteration_iter-num>
|
jpayne@1
|
10385 <Iteration_query-ID>Query_208</Iteration_query-ID>
|
jpayne@1
|
10386 <Iteration_query-def>fliC_z4,z32_Salmonella.enterica_Tallahassee_AY353507_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
10387 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
10388 <Iteration_hits>
|
jpayne@1
|
10389 <Hit>
|
jpayne@1
|
10390 <Hit_num>1</Hit_num>
|
jpayne@1
|
10391 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10392 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10393 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10394 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10395 <Hit_hsps>
|
jpayne@1
|
10396 <Hsp>
|
jpayne@1
|
10397 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10398 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
10399 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
10400 <Hsp_evalue>2.60025e-128</Hsp_evalue>
|
jpayne@1
|
10401 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10402 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
10403 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10404 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
10405 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10406 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10407 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
10408 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
10409 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10410 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
10411 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATTTCCATTGCGCAGACGACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCGAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACTGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGCGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
10412 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
10413 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || ||| | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || || ||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
10414 </Hsp>
|
jpayne@1
|
10415 <Hsp>
|
jpayne@1
|
10416 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10417 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
10418 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
10419 <Hsp_evalue>2.89136e-53</Hsp_evalue>
|
jpayne@1
|
10420 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
10421 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
10422 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
10423 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10424 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10425 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10426 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
10427 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
10428 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10429 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
10430 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCTGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10431 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10432 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10433 </Hsp>
|
jpayne@1
|
10434 </Hit_hsps>
|
jpayne@1
|
10435 </Hit>
|
jpayne@1
|
10436 </Iteration_hits>
|
jpayne@1
|
10437 <Iteration_stat>
|
jpayne@1
|
10438 <Statistics>
|
jpayne@1
|
10439 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10440 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10441 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10442 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
10443 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10444 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10445 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10446 </Statistics>
|
jpayne@1
|
10447 </Iteration_stat>
|
jpayne@1
|
10448 </Iteration>
|
jpayne@1
|
10449 <Iteration>
|
jpayne@1
|
10450 <Iteration_iter-num>209</Iteration_iter-num>
|
jpayne@1
|
10451 <Iteration_query-ID>Query_209</Iteration_query-ID>
|
jpayne@1
|
10452 <Iteration_query-def>fliC_z4,z32_Salmonella.enterica_IIIa.63:z4,z32:-_AY353508_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
10453 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
10454 <Iteration_hits>
|
jpayne@1
|
10455 <Hit>
|
jpayne@1
|
10456 <Hit_num>1</Hit_num>
|
jpayne@1
|
10457 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10458 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10459 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10460 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10461 <Hit_hsps>
|
jpayne@1
|
10462 <Hsp>
|
jpayne@1
|
10463 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10464 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
10465 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
10466 <Hsp_evalue>2.61871e-123</Hsp_evalue>
|
jpayne@1
|
10467 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10468 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
10469 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10470 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
10471 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10472 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10473 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
10474 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
10475 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10476 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
10477 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTAACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
10478 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
10479 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
10480 </Hsp>
|
jpayne@1
|
10481 <Hsp>
|
jpayne@1
|
10482 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10483 <Hsp_bit-score>228.258</Hsp_bit-score>
|
jpayne@1
|
10484 <Hsp_score>123</Hsp_score>
|
jpayne@1
|
10485 <Hsp_evalue>1.32632e-61</Hsp_evalue>
|
jpayne@1
|
10486 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
10487 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
10488 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
10489 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10490 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10491 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10492 <Hsp_identity>173</Hsp_identity>
|
jpayne@1
|
10493 <Hsp_positive>173</Hsp_positive>
|
jpayne@1
|
10494 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10495 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
10496 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACGGTAAATAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10497 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10498 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| ||||||| || ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10499 </Hsp>
|
jpayne@1
|
10500 </Hit_hsps>
|
jpayne@1
|
10501 </Hit>
|
jpayne@1
|
10502 </Iteration_hits>
|
jpayne@1
|
10503 <Iteration_stat>
|
jpayne@1
|
10504 <Statistics>
|
jpayne@1
|
10505 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10506 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10507 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10508 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
10509 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10510 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10511 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10512 </Statistics>
|
jpayne@1
|
10513 </Iteration_stat>
|
jpayne@1
|
10514 </Iteration>
|
jpayne@1
|
10515 <Iteration>
|
jpayne@1
|
10516 <Iteration_iter-num>210</Iteration_iter-num>
|
jpayne@1
|
10517 <Iteration_query-ID>Query_210</Iteration_query-ID>
|
jpayne@1
|
10518 <Iteration_query-def>fliC_z4,z32_Salmonella.enterica_IIIa.41:z4,z32:-_AY353509_z4,z23__1266</Iteration_query-def>
|
jpayne@1
|
10519 <Iteration_query-len>1266</Iteration_query-len>
|
jpayne@1
|
10520 <Iteration_hits>
|
jpayne@1
|
10521 <Hit>
|
jpayne@1
|
10522 <Hit_num>1</Hit_num>
|
jpayne@1
|
10523 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10524 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10525 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10526 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10527 <Hit_hsps>
|
jpayne@1
|
10528 <Hsp>
|
jpayne@1
|
10529 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10530 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
10531 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
10532 <Hsp_evalue>1.20688e-126</Hsp_evalue>
|
jpayne@1
|
10533 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10534 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
10535 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10536 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
10537 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10538 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10539 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
10540 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
10541 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
10542 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
10543 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTATCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATTGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
10544 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
10545 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| ||||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
10546 </Hsp>
|
jpayne@1
|
10547 </Hit_hsps>
|
jpayne@1
|
10548 </Hit>
|
jpayne@1
|
10549 </Iteration_hits>
|
jpayne@1
|
10550 <Iteration_stat>
|
jpayne@1
|
10551 <Statistics>
|
jpayne@1
|
10552 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10553 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10554 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10555 <Statistics_eff-space>68260608</Statistics_eff-space>
|
jpayne@1
|
10556 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10557 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10558 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10559 </Statistics>
|
jpayne@1
|
10560 </Iteration_stat>
|
jpayne@1
|
10561 </Iteration>
|
jpayne@1
|
10562 <Iteration>
|
jpayne@1
|
10563 <Iteration_iter-num>211</Iteration_iter-num>
|
jpayne@1
|
10564 <Iteration_query-ID>Query_211</Iteration_query-ID>
|
jpayne@1
|
10565 <Iteration_query-def>fliC_z41_Salmonella.enterica_Ottawa_AY353510_k,z__1491</Iteration_query-def>
|
jpayne@1
|
10566 <Iteration_query-len>1491</Iteration_query-len>
|
jpayne@1
|
10567 <Iteration_hits>
|
jpayne@1
|
10568 <Hit>
|
jpayne@1
|
10569 <Hit_num>1</Hit_num>
|
jpayne@1
|
10570 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10571 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10572 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10573 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10574 <Hit_hsps>
|
jpayne@1
|
10575 <Hsp>
|
jpayne@1
|
10576 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10577 <Hsp_bit-score>497.869</Hsp_bit-score>
|
jpayne@1
|
10578 <Hsp_score>269</Hsp_score>
|
jpayne@1
|
10579 <Hsp_evalue>1.07805e-142</Hsp_evalue>
|
jpayne@1
|
10580 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10581 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
10582 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10583 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
10584 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10585 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10586 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
10587 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
10588 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10589 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
10590 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACCCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCGAACGACGGTGAAACCAT</Hsp_qseq>
|
jpayne@1
|
10591 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
10592 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | |||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||| || || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||||||</Hsp_midline>
|
jpayne@1
|
10593 </Hsp>
|
jpayne@1
|
10594 <Hsp>
|
jpayne@1
|
10595 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10596 <Hsp_bit-score>195.019</Hsp_bit-score>
|
jpayne@1
|
10597 <Hsp_score>105</Hsp_score>
|
jpayne@1
|
10598 <Hsp_evalue>1.58394e-51</Hsp_evalue>
|
jpayne@1
|
10599 <Hsp_query-from>1294</Hsp_query-from>
|
jpayne@1
|
10600 <Hsp_query-to>1491</Hsp_query-to>
|
jpayne@1
|
10601 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
10602 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10603 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10604 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10605 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
10606 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
10607 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10608 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
10609 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10610 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10611 <Hsp_midline>|||||||| | || || || |||||||| ||||| || |||| ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10612 </Hsp>
|
jpayne@1
|
10613 </Hit_hsps>
|
jpayne@1
|
10614 </Hit>
|
jpayne@1
|
10615 </Iteration_hits>
|
jpayne@1
|
10616 <Iteration_stat>
|
jpayne@1
|
10617 <Statistics>
|
jpayne@1
|
10618 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10619 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10620 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10621 <Statistics_eff-space>80567208</Statistics_eff-space>
|
jpayne@1
|
10622 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10623 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10624 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10625 </Statistics>
|
jpayne@1
|
10626 </Iteration_stat>
|
jpayne@1
|
10627 </Iteration>
|
jpayne@1
|
10628 <Iteration>
|
jpayne@1
|
10629 <Iteration_iter-num>212</Iteration_iter-num>
|
jpayne@1
|
10630 <Iteration_query-ID>Query_212</Iteration_query-ID>
|
jpayne@1
|
10631 <Iteration_query-def>fliC_z41_Salmonella.enterica_Maska_AY353511_k,z__1491</Iteration_query-def>
|
jpayne@1
|
10632 <Iteration_query-len>1491</Iteration_query-len>
|
jpayne@1
|
10633 <Iteration_hits>
|
jpayne@1
|
10634 <Hit>
|
jpayne@1
|
10635 <Hit_num>1</Hit_num>
|
jpayne@1
|
10636 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10637 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10638 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10639 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10640 <Hit_hsps>
|
jpayne@1
|
10641 <Hsp>
|
jpayne@1
|
10642 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10643 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
10644 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
10645 <Hsp_evalue>6.53427e-135</Hsp_evalue>
|
jpayne@1
|
10646 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10647 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
10648 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10649 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
10650 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10651 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10652 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
10653 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
10654 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10655 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
10656 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
10657 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
10658 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
10659 </Hsp>
|
jpayne@1
|
10660 <Hsp>
|
jpayne@1
|
10661 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10662 <Hsp_bit-score>206.098</Hsp_bit-score>
|
jpayne@1
|
10663 <Hsp_score>111</Hsp_score>
|
jpayne@1
|
10664 <Hsp_evalue>7.31739e-55</Hsp_evalue>
|
jpayne@1
|
10665 <Hsp_query-from>1294</Hsp_query-from>
|
jpayne@1
|
10666 <Hsp_query-to>1491</Hsp_query-to>
|
jpayne@1
|
10667 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
10668 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10669 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10670 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10671 <Hsp_identity>170</Hsp_identity>
|
jpayne@1
|
10672 <Hsp_positive>170</Hsp_positive>
|
jpayne@1
|
10673 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10674 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
10675 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10676 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10677 <Hsp_midline>|||||||| | || || || |||||||| ||||| || |||| ||| ||| || || |||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10678 </Hsp>
|
jpayne@1
|
10679 </Hit_hsps>
|
jpayne@1
|
10680 </Hit>
|
jpayne@1
|
10681 </Iteration_hits>
|
jpayne@1
|
10682 <Iteration_stat>
|
jpayne@1
|
10683 <Statistics>
|
jpayne@1
|
10684 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10685 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10686 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10687 <Statistics_eff-space>80567208</Statistics_eff-space>
|
jpayne@1
|
10688 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10689 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10690 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10691 </Statistics>
|
jpayne@1
|
10692 </Iteration_stat>
|
jpayne@1
|
10693 </Iteration>
|
jpayne@1
|
10694 <Iteration>
|
jpayne@1
|
10695 <Iteration_iter-num>213</Iteration_iter-num>
|
jpayne@1
|
10696 <Iteration_query-ID>Query_213</Iteration_query-ID>
|
jpayne@1
|
10697 <Iteration_query-def>fliC_z44_Salmonella.enterica_Quinhon_AY353513_k,z__1491</Iteration_query-def>
|
jpayne@1
|
10698 <Iteration_query-len>1491</Iteration_query-len>
|
jpayne@1
|
10699 <Iteration_hits>
|
jpayne@1
|
10700 <Hit>
|
jpayne@1
|
10701 <Hit_num>1</Hit_num>
|
jpayne@1
|
10702 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10703 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10704 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10705 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10706 <Hit_hsps>
|
jpayne@1
|
10707 <Hsp>
|
jpayne@1
|
10708 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10709 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
10710 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
10711 <Hsp_evalue>1.41442e-131</Hsp_evalue>
|
jpayne@1
|
10712 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10713 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
10714 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10715 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
10716 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10717 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10718 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
10719 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
10720 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10721 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
10722 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
10723 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
10724 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || ||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
10725 </Hsp>
|
jpayne@1
|
10726 <Hsp>
|
jpayne@1
|
10727 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10728 <Hsp_bit-score>222.718</Hsp_bit-score>
|
jpayne@1
|
10729 <Hsp_score>120</Hsp_score>
|
jpayne@1
|
10730 <Hsp_evalue>7.2658e-60</Hsp_evalue>
|
jpayne@1
|
10731 <Hsp_query-from>1279</Hsp_query-from>
|
jpayne@1
|
10732 <Hsp_query-to>1491</Hsp_query-to>
|
jpayne@1
|
10733 <Hsp_hit-from>438</Hsp_hit-from>
|
jpayne@1
|
10734 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10735 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10736 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10737 <Hsp_identity>183</Hsp_identity>
|
jpayne@1
|
10738 <Hsp_positive>183</Hsp_positive>
|
jpayne@1
|
10739 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10740 <Hsp_align-len>214</Hsp_align-len>
|
jpayne@1
|
10741 <Hsp_qseq>CTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10742 <Hsp_hseq>CTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10743 <Hsp_midline>||||| || |||| |||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10744 </Hsp>
|
jpayne@1
|
10745 </Hit_hsps>
|
jpayne@1
|
10746 </Hit>
|
jpayne@1
|
10747 </Iteration_hits>
|
jpayne@1
|
10748 <Iteration_stat>
|
jpayne@1
|
10749 <Statistics>
|
jpayne@1
|
10750 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10751 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10752 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10753 <Statistics_eff-space>80567208</Statistics_eff-space>
|
jpayne@1
|
10754 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10755 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10756 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10757 </Statistics>
|
jpayne@1
|
10758 </Iteration_stat>
|
jpayne@1
|
10759 </Iteration>
|
jpayne@1
|
10760 <Iteration>
|
jpayne@1
|
10761 <Iteration_iter-num>214</Iteration_iter-num>
|
jpayne@1
|
10762 <Iteration_query-ID>Query_214</Iteration_query-ID>
|
jpayne@1
|
10763 <Iteration_query-def>fliC_z47_Salmonella.enterica_IIIb.38:z47:z53_AY353514_l,v__1500</Iteration_query-def>
|
jpayne@1
|
10764 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
10765 <Iteration_hits>
|
jpayne@1
|
10766 <Hit>
|
jpayne@1
|
10767 <Hit_num>1</Hit_num>
|
jpayne@1
|
10768 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10769 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10770 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10771 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10772 <Hit_hsps>
|
jpayne@1
|
10773 <Hsp>
|
jpayne@1
|
10774 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10775 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
10776 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
10777 <Hsp_evalue>6.48183e-145</Hsp_evalue>
|
jpayne@1
|
10778 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10779 <Hsp_query-to>483</Hsp_query-to>
|
jpayne@1
|
10780 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10781 <Hsp_hit-to>1260</Hsp_hit-to>
|
jpayne@1
|
10782 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10783 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10784 <Hsp_identity>415</Hsp_identity>
|
jpayne@1
|
10785 <Hsp_positive>415</Hsp_positive>
|
jpayne@1
|
10786 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
10787 <Hsp_align-len>485</Hsp_align-len>
|
jpayne@1
|
10788 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACCATTGATATCGATCTG-AAA</Hsp_qseq>
|
jpayne@1
|
10789 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAA</Hsp_hseq>
|
jpayne@1
|
10790 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||||||| ||||||||| |||</Hsp_midline>
|
jpayne@1
|
10791 </Hsp>
|
jpayne@1
|
10792 <Hsp>
|
jpayne@1
|
10793 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10794 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
10795 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
10796 <Hsp_evalue>2.03251e-60</Hsp_evalue>
|
jpayne@1
|
10797 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
10798 <Hsp_query-to>1500</Hsp_query-to>
|
jpayne@1
|
10799 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
10800 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10801 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10802 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10803 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
10804 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
10805 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10806 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
10807 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10808 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10809 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10810 </Hsp>
|
jpayne@1
|
10811 </Hit_hsps>
|
jpayne@1
|
10812 </Hit>
|
jpayne@1
|
10813 </Iteration_hits>
|
jpayne@1
|
10814 <Iteration_stat>
|
jpayne@1
|
10815 <Statistics>
|
jpayne@1
|
10816 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10817 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10818 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10819 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
10820 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10821 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10822 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10823 </Statistics>
|
jpayne@1
|
10824 </Iteration_stat>
|
jpayne@1
|
10825 </Iteration>
|
jpayne@1
|
10826 <Iteration>
|
jpayne@1
|
10827 <Iteration_iter-num>215</Iteration_iter-num>
|
jpayne@1
|
10828 <Iteration_query-ID>Query_215</Iteration_query-ID>
|
jpayne@1
|
10829 <Iteration_query-def>fliC_z52_Salmonella.enterica_IIIb.50:z52:z35_AY353516_l,v__1506</Iteration_query-def>
|
jpayne@1
|
10830 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
10831 <Iteration_hits>
|
jpayne@1
|
10832 <Hit>
|
jpayne@1
|
10833 <Hit_num>1</Hit_num>
|
jpayne@1
|
10834 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10835 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10836 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10837 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10838 <Hit_hsps>
|
jpayne@1
|
10839 <Hsp>
|
jpayne@1
|
10840 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10841 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
10842 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
10843 <Hsp_evalue>3.02791e-143</Hsp_evalue>
|
jpayne@1
|
10844 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10845 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
10846 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10847 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
10848 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10849 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10850 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
10851 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
10852 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10853 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
10854 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGTACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
10855 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
10856 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
10857 </Hsp>
|
jpayne@1
|
10858 <Hsp>
|
jpayne@1
|
10859 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10860 <Hsp_bit-score>230.105</Hsp_bit-score>
|
jpayne@1
|
10861 <Hsp_score>124</Hsp_score>
|
jpayne@1
|
10862 <Hsp_evalue>4.38628e-62</Hsp_evalue>
|
jpayne@1
|
10863 <Hsp_query-from>1251</Hsp_query-from>
|
jpayne@1
|
10864 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
10865 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
10866 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10867 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10868 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10869 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
10870 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
10871 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10872 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
10873 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCTAACATGTCTCGTGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10874 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10875 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| ||||| |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10876 </Hsp>
|
jpayne@1
|
10877 </Hit_hsps>
|
jpayne@1
|
10878 </Hit>
|
jpayne@1
|
10879 </Iteration_hits>
|
jpayne@1
|
10880 <Iteration_stat>
|
jpayne@1
|
10881 <Statistics>
|
jpayne@1
|
10882 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10883 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10884 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10885 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
10886 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10887 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10888 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10889 </Statistics>
|
jpayne@1
|
10890 </Iteration_stat>
|
jpayne@1
|
10891 </Iteration>
|
jpayne@1
|
10892 <Iteration>
|
jpayne@1
|
10893 <Iteration_iter-num>216</Iteration_iter-num>
|
jpayne@1
|
10894 <Iteration_query-ID>Query_216</Iteration_query-ID>
|
jpayne@1
|
10895 <Iteration_query-def>fliC_z52_Salmonella.enterica_IIIb.65:z52:z35_AY353517_l,v__1506</Iteration_query-def>
|
jpayne@1
|
10896 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
10897 <Iteration_hits>
|
jpayne@1
|
10898 <Hit>
|
jpayne@1
|
10899 <Hit_num>1</Hit_num>
|
jpayne@1
|
10900 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10901 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10902 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10903 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10904 <Hit_hsps>
|
jpayne@1
|
10905 <Hsp>
|
jpayne@1
|
10906 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10907 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
10908 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
10909 <Hsp_evalue>3.02791e-143</Hsp_evalue>
|
jpayne@1
|
10910 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10911 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
10912 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10913 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
10914 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10915 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10916 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
10917 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
10918 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10919 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
10920 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
10921 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
10922 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
10923 </Hsp>
|
jpayne@1
|
10924 <Hsp>
|
jpayne@1
|
10925 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10926 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
10927 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
10928 <Hsp_evalue>2.04074e-60</Hsp_evalue>
|
jpayne@1
|
10929 <Hsp_query-from>1251</Hsp_query-from>
|
jpayne@1
|
10930 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
10931 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
10932 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10933 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10934 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10935 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
10936 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
10937 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10938 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
10939 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
10940 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
10941 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
10942 </Hsp>
|
jpayne@1
|
10943 </Hit_hsps>
|
jpayne@1
|
10944 </Hit>
|
jpayne@1
|
10945 </Iteration_hits>
|
jpayne@1
|
10946 <Iteration_stat>
|
jpayne@1
|
10947 <Statistics>
|
jpayne@1
|
10948 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
10949 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
10950 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
10951 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
10952 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
10953 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
10954 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
10955 </Statistics>
|
jpayne@1
|
10956 </Iteration_stat>
|
jpayne@1
|
10957 </Iteration>
|
jpayne@1
|
10958 <Iteration>
|
jpayne@1
|
10959 <Iteration_iter-num>217</Iteration_iter-num>
|
jpayne@1
|
10960 <Iteration_query-ID>Query_217</Iteration_query-ID>
|
jpayne@1
|
10961 <Iteration_query-def>fliC_z6_Salmonella.enterica_II.48:e,n,x,z15:z6_AY353519_k,z__1503</Iteration_query-def>
|
jpayne@1
|
10962 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
10963 <Iteration_hits>
|
jpayne@1
|
10964 <Hit>
|
jpayne@1
|
10965 <Hit_num>1</Hit_num>
|
jpayne@1
|
10966 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
10967 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
10968 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
10969 <Hit_len>1962</Hit_len>
|
jpayne@1
|
10970 <Hit_hsps>
|
jpayne@1
|
10971 <Hsp>
|
jpayne@1
|
10972 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
10973 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
10974 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
10975 <Hsp_evalue>6.49495e-145</Hsp_evalue>
|
jpayne@1
|
10976 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
10977 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
10978 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
10979 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
10980 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
10981 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
10982 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
10983 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
10984 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
10985 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
10986 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAGGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCACAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
10987 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
10988 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
10989 </Hsp>
|
jpayne@1
|
10990 <Hsp>
|
jpayne@1
|
10991 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
10992 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
10993 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
10994 <Hsp_evalue>2.03662e-60</Hsp_evalue>
|
jpayne@1
|
10995 <Hsp_query-from>1248</Hsp_query-from>
|
jpayne@1
|
10996 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
10997 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
10998 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
10999 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11000 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11001 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
11002 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
11003 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
11004 <Hsp_align-len>258</Hsp_align-len>
|
jpayne@1
|
11005 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACT-TGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11006 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCT-TCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11007 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| || |||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11008 </Hsp>
|
jpayne@1
|
11009 </Hit_hsps>
|
jpayne@1
|
11010 </Hit>
|
jpayne@1
|
11011 </Iteration_hits>
|
jpayne@1
|
11012 <Iteration_stat>
|
jpayne@1
|
11013 <Statistics>
|
jpayne@1
|
11014 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11015 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11016 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11017 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
11018 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11019 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11020 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11021 </Statistics>
|
jpayne@1
|
11022 </Iteration_stat>
|
jpayne@1
|
11023 </Iteration>
|
jpayne@1
|
11024 <Iteration>
|
jpayne@1
|
11025 <Iteration_iter-num>218</Iteration_iter-num>
|
jpayne@1
|
11026 <Iteration_query-ID>Query_218</Iteration_query-ID>
|
jpayne@1
|
11027 <Iteration_query-def>fliC_z69_Salmonella.enterica_Pietersburg_AY353520_k,z__1503</Iteration_query-def>
|
jpayne@1
|
11028 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
11029 <Iteration_hits>
|
jpayne@1
|
11030 <Hit>
|
jpayne@1
|
11031 <Hit_num>1</Hit_num>
|
jpayne@1
|
11032 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11033 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11034 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11035 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11036 <Hit_hsps>
|
jpayne@1
|
11037 <Hsp>
|
jpayne@1
|
11038 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11039 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
11040 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
11041 <Hsp_evalue>3.04326e-138</Hsp_evalue>
|
jpayne@1
|
11042 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11043 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
11044 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11045 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
11046 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11047 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11048 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
11049 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
11050 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11051 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
11052 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCCCAGTCCGCTCTGGGTACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACCGCAAACATCAAAGGTCTGAGCCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCGGAAAT-CACGCAGCGTCTGAACGAAATCGACCGCGTATCCGGTCAGACCCAGTTCAACGGCGTGAAAGTTCTGGCACAGGACAACACTCTGACCATCCAGGTTGGCGCTAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
11053 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCA-GCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
11054 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| || ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| | || ||||||||||||| |||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | ||| | || ||||| | || || || | || ||||||| ||||| || ||| |||||| | |||||||| ||||| || |||||| || || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| |||||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
11055 </Hsp>
|
jpayne@1
|
11056 <Hsp>
|
jpayne@1
|
11057 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
11058 <Hsp_bit-score>195.019</Hsp_bit-score>
|
jpayne@1
|
11059 <Hsp_score>105</Hsp_score>
|
jpayne@1
|
11060 <Hsp_evalue>1.59684e-51</Hsp_evalue>
|
jpayne@1
|
11061 <Hsp_query-from>1306</Hsp_query-from>
|
jpayne@1
|
11062 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
11063 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
11064 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11065 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11066 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11067 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
11068 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
11069 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11070 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
11071 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTCCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11072 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11073 <Hsp_midline>|||||||| | || || || |||||||| ||||| || |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11074 </Hsp>
|
jpayne@1
|
11075 </Hit_hsps>
|
jpayne@1
|
11076 </Hit>
|
jpayne@1
|
11077 </Iteration_hits>
|
jpayne@1
|
11078 <Iteration_stat>
|
jpayne@1
|
11079 <Statistics>
|
jpayne@1
|
11080 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11081 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11082 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11083 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
11084 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11085 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11086 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11087 </Statistics>
|
jpayne@1
|
11088 </Iteration_stat>
|
jpayne@1
|
11089 </Iteration>
|
jpayne@1
|
11090 <Iteration>
|
jpayne@1
|
11091 <Iteration_iter-num>219</Iteration_iter-num>
|
jpayne@1
|
11092 <Iteration_query-ID>Query_219</Iteration_query-ID>
|
jpayne@1
|
11093 <Iteration_query-def>fliC_f,g,t_Salmonella.enterica_Berta_AY353532_g,m__1527</Iteration_query-def>
|
jpayne@1
|
11094 <Iteration_query-len>1527</Iteration_query-len>
|
jpayne@1
|
11095 <Iteration_hits>
|
jpayne@1
|
11096 <Hit>
|
jpayne@1
|
11097 <Hit_num>1</Hit_num>
|
jpayne@1
|
11098 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11099 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11100 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11101 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11102 <Hit_hsps>
|
jpayne@1
|
11103 <Hsp>
|
jpayne@1
|
11104 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11105 <Hsp_bit-score>2457.16</Hsp_bit-score>
|
jpayne@1
|
11106 <Hsp_score>1330</Hsp_score>
|
jpayne@1
|
11107 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
11108 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11109 <Hsp_query-to>1527</Hsp_query-to>
|
jpayne@1
|
11110 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11111 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11112 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11113 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11114 <Hsp_identity>1463</Hsp_identity>
|
jpayne@1
|
11115 <Hsp_positive>1463</Hsp_positive>
|
jpayne@1
|
11116 <Hsp_gaps>9</Hsp_gaps>
|
jpayne@1
|
11117 <Hsp_align-len>1527</Hsp_align-len>
|
jpayne@1
|
11118 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTGCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATCCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAGTCCAGCTTCAAGAATGTTACGGGGTATGATACCTATGCTGTTGGTGCCAATAAATATCGCGTGGATGTCAACTCAGGGGCGGTAGTAACTGACACCACTGCTCCAACTGTTCCTGATAAAGTATACGTAAACGCTGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGACCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGCAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11119 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGA------TGATGC-A--GCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11120 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||| | |||||| |||||||||| || ||| | || ||||| || ||||||||||| || | | | | || ||||||||||| ||||| || |||||||||||||| ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11121 </Hsp>
|
jpayne@1
|
11122 </Hit_hsps>
|
jpayne@1
|
11123 </Hit>
|
jpayne@1
|
11124 </Iteration_hits>
|
jpayne@1
|
11125 <Iteration_stat>
|
jpayne@1
|
11126 <Statistics>
|
jpayne@1
|
11127 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11128 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11129 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11130 <Statistics_eff-space>82536264</Statistics_eff-space>
|
jpayne@1
|
11131 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11132 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11133 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11134 </Statistics>
|
jpayne@1
|
11135 </Iteration_stat>
|
jpayne@1
|
11136 </Iteration>
|
jpayne@1
|
11137 <Iteration>
|
jpayne@1
|
11138 <Iteration_iter-num>220</Iteration_iter-num>
|
jpayne@1
|
11139 <Iteration_query-ID>Query_220</Iteration_query-ID>
|
jpayne@1
|
11140 <Iteration_query-def>fliC_f,g,t_Salmonella.enterica_Berta_AY353533_g,m__1527</Iteration_query-def>
|
jpayne@1
|
11141 <Iteration_query-len>1527</Iteration_query-len>
|
jpayne@1
|
11142 <Iteration_hits>
|
jpayne@1
|
11143 <Hit>
|
jpayne@1
|
11144 <Hit_num>1</Hit_num>
|
jpayne@1
|
11145 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11146 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11147 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11148 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11149 <Hit_hsps>
|
jpayne@1
|
11150 <Hsp>
|
jpayne@1
|
11151 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11152 <Hsp_bit-score>2457.16</Hsp_bit-score>
|
jpayne@1
|
11153 <Hsp_score>1330</Hsp_score>
|
jpayne@1
|
11154 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
11155 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11156 <Hsp_query-to>1527</Hsp_query-to>
|
jpayne@1
|
11157 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11158 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11159 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11160 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11161 <Hsp_identity>1463</Hsp_identity>
|
jpayne@1
|
11162 <Hsp_positive>1463</Hsp_positive>
|
jpayne@1
|
11163 <Hsp_gaps>9</Hsp_gaps>
|
jpayne@1
|
11164 <Hsp_align-len>1527</Hsp_align-len>
|
jpayne@1
|
11165 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTGCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATCCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAGTCCAGCTTCAAGAATGTTACGGGGTATGATACCTATGCTGTTGGTGCCAATAAATATCGCGTGGATGTCAACTCAGGGGCGGTAGTAACTGACACCACTGCTCCAACTGTTCCTGATAAAGTATACGTAAACGCTGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGACCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGCAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11166 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGA------TGATGC-A--GCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11167 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||| | |||||| |||||||||| || ||| | || ||||| || ||||||||||| || | | | | || ||||||||||| ||||| || |||||||||||||| ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11168 </Hsp>
|
jpayne@1
|
11169 </Hit_hsps>
|
jpayne@1
|
11170 </Hit>
|
jpayne@1
|
11171 </Iteration_hits>
|
jpayne@1
|
11172 <Iteration_stat>
|
jpayne@1
|
11173 <Statistics>
|
jpayne@1
|
11174 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11175 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11176 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11177 <Statistics_eff-space>82536264</Statistics_eff-space>
|
jpayne@1
|
11178 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11179 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11180 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11181 </Statistics>
|
jpayne@1
|
11182 </Iteration_stat>
|
jpayne@1
|
11183 </Iteration>
|
jpayne@1
|
11184 <Iteration>
|
jpayne@1
|
11185 <Iteration_iter-num>221</Iteration_iter-num>
|
jpayne@1
|
11186 <Iteration_query-ID>Query_221</Iteration_query-ID>
|
jpayne@1
|
11187 <Iteration_query-def>fliC_f,g,t_Salmonella.enterica_II.17:f,g,t:e,n,x,z15_AY353534_g,m__1518</Iteration_query-def>
|
jpayne@1
|
11188 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
11189 <Iteration_hits>
|
jpayne@1
|
11190 <Hit>
|
jpayne@1
|
11191 <Hit_num>1</Hit_num>
|
jpayne@1
|
11192 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11193 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11194 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11195 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11196 <Hit_hsps>
|
jpayne@1
|
11197 <Hsp>
|
jpayne@1
|
11198 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11199 <Hsp_bit-score>2510.72</Hsp_bit-score>
|
jpayne@1
|
11200 <Hsp_score>1359</Hsp_score>
|
jpayne@1
|
11201 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
11202 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11203 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
11204 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11205 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11206 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11207 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11208 <Hsp_identity>1465</Hsp_identity>
|
jpayne@1
|
11209 <Hsp_positive>1465</Hsp_positive>
|
jpayne@1
|
11210 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11211 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
11212 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCTCAGTCCTCACTGAGTTCCGCTATCGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAGTTCAACGGCGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTGGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCGGCAGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAATGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGTGAAAGTAAGATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAATCCACTGGCTGCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCGCTGGGGGCAATTCAGAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11213 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11214 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11215 </Hsp>
|
jpayne@1
|
11216 </Hit_hsps>
|
jpayne@1
|
11217 </Hit>
|
jpayne@1
|
11218 </Iteration_hits>
|
jpayne@1
|
11219 <Iteration_stat>
|
jpayne@1
|
11220 <Statistics>
|
jpayne@1
|
11221 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11222 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11223 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11224 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
11225 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11226 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11227 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11228 </Statistics>
|
jpayne@1
|
11229 </Iteration_stat>
|
jpayne@1
|
11230 </Iteration>
|
jpayne@1
|
11231 <Iteration>
|
jpayne@1
|
11232 <Iteration_iter-num>222</Iteration_iter-num>
|
jpayne@1
|
11233 <Iteration_query-ID>Query_222</Iteration_query-ID>
|
jpayne@1
|
11234 <Iteration_query-def>fliC_f,g,t_Salmonella.enterica_II.1,40:f,g,t:z42_AY353535_g,m__1518</Iteration_query-def>
|
jpayne@1
|
11235 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
11236 <Iteration_hits>
|
jpayne@1
|
11237 <Hit>
|
jpayne@1
|
11238 <Hit_num>1</Hit_num>
|
jpayne@1
|
11239 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11240 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11241 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11242 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11243 <Hit_hsps>
|
jpayne@1
|
11244 <Hsp>
|
jpayne@1
|
11245 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11246 <Hsp_bit-score>2488.56</Hsp_bit-score>
|
jpayne@1
|
11247 <Hsp_score>1347</Hsp_score>
|
jpayne@1
|
11248 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
11249 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11250 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
11251 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11252 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11253 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11254 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11255 <Hsp_identity>1461</Hsp_identity>
|
jpayne@1
|
11256 <Hsp_positive>1461</Hsp_positive>
|
jpayne@1
|
11257 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11258 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
11259 <Hsp_qseq>ATGGCACAAGTCATTAACACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCTCAGTCCACACTGAGTTCCGCCATCGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGTGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATTGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCCCCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCGGCAGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAATGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGTGAAAGTAAGATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAATCCACTGGCTGCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCGCTGGGGGCAATTCAGAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCCGGTACCTCTGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11260 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11261 <Hsp_midline>||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||| ||||||||||||| || |||||||||||||||||||||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || ||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11262 </Hsp>
|
jpayne@1
|
11263 </Hit_hsps>
|
jpayne@1
|
11264 </Hit>
|
jpayne@1
|
11265 </Iteration_hits>
|
jpayne@1
|
11266 <Iteration_stat>
|
jpayne@1
|
11267 <Statistics>
|
jpayne@1
|
11268 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11269 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11270 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11271 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
11272 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11273 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11274 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11275 </Statistics>
|
jpayne@1
|
11276 </Iteration_stat>
|
jpayne@1
|
11277 </Iteration>
|
jpayne@1
|
11278 <Iteration>
|
jpayne@1
|
11279 <Iteration_iter-num>223</Iteration_iter-num>
|
jpayne@1
|
11280 <Iteration_query-ID>Query_223</Iteration_query-ID>
|
jpayne@1
|
11281 <Iteration_query-def>fliC_g,m,t_Salmonella.enterica_II.28:g,m,t:e,n,x_AY353536_g,m__1515</Iteration_query-def>
|
jpayne@1
|
11282 <Iteration_query-len>1515</Iteration_query-len>
|
jpayne@1
|
11283 <Iteration_hits>
|
jpayne@1
|
11284 <Hit>
|
jpayne@1
|
11285 <Hit_num>1</Hit_num>
|
jpayne@1
|
11286 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11287 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11288 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11289 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11290 <Hit_hsps>
|
jpayne@1
|
11291 <Hsp>
|
jpayne@1
|
11292 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11293 <Hsp_bit-score>2362.99</Hsp_bit-score>
|
jpayne@1
|
11294 <Hsp_score>1279</Hsp_score>
|
jpayne@1
|
11295 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
11296 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11297 <Hsp_query-to>1515</Hsp_query-to>
|
jpayne@1
|
11298 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11299 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11300 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11301 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11302 <Hsp_identity>1440</Hsp_identity>
|
jpayne@1
|
11303 <Hsp_positive>1440</Hsp_positive>
|
jpayne@1
|
11304 <Hsp_gaps>5</Hsp_gaps>
|
jpayne@1
|
11305 <Hsp_align-len>1519</Hsp_align-len>
|
jpayne@1
|
11306 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCTCAGTCCTCACTGAGTTCCGCTATCGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAGTTCAACGGCGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTGGGTGCTAACGATGGTGAATCTATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGATTCAATGTTAACGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGGTACGATACCTATGCAGCTGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGCAGCAGCCCCGGATAAAGTATATGTAAATGCTGCAAACGGTCAGTTGACAACTGATGATGCGCAAAATAACACTGCAGTTGATCTATTCAAGACCACTAAATCTACTGCTGGTACCGATGACGCCAAAGCGATAGCTAATGTCATTAAGGGTGGTAAAGAGGGAGATACCTTTGATTATAAAGGCGTATCTTTTACTATTGATACAAAAAATGGTAATGATGGTAATGGTACTGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCGGTGGTG--GT-AGTGTTAATGATGCTACCTTACAATCAAGCAGAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAATGAGAGTGCGAAACTTTCTGATTTGGAAGCAAATAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAATCCACTGGCTGCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCGCTGGGGGCAATTCAGAACCGCTTTGATTCTGCCATTACCAACCTTGGTAATACGGTAAATAA-CTTATCTTCTGCCCGTAGTCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11307 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCC-GCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11308 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | || |||||||| ||| | ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||||||| || ||||||||||||||||||||||| || ||||||||||||||||||||| ||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||| ||| ||||| | | |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||| || || | || | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11309 </Hsp>
|
jpayne@1
|
11310 </Hit_hsps>
|
jpayne@1
|
11311 </Hit>
|
jpayne@1
|
11312 </Iteration_hits>
|
jpayne@1
|
11313 <Iteration_stat>
|
jpayne@1
|
11314 <Statistics>
|
jpayne@1
|
11315 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11316 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11317 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11318 <Statistics_eff-space>81879912</Statistics_eff-space>
|
jpayne@1
|
11319 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11320 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11321 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11322 </Statistics>
|
jpayne@1
|
11323 </Iteration_stat>
|
jpayne@1
|
11324 </Iteration>
|
jpayne@1
|
11325 <Iteration>
|
jpayne@1
|
11326 <Iteration_iter-num>224</Iteration_iter-num>
|
jpayne@1
|
11327 <Iteration_query-ID>Query_224</Iteration_query-ID>
|
jpayne@1
|
11328 <Iteration_query-def>fliC_g,m,t_Salmonella.enterica_II.6,8:g,m,t:1,7_AY353537_g,m__1515</Iteration_query-def>
|
jpayne@1
|
11329 <Iteration_query-len>1515</Iteration_query-len>
|
jpayne@1
|
11330 <Iteration_hits>
|
jpayne@1
|
11331 <Hit>
|
jpayne@1
|
11332 <Hit_num>1</Hit_num>
|
jpayne@1
|
11333 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11334 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11335 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11336 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11337 <Hit_hsps>
|
jpayne@1
|
11338 <Hsp>
|
jpayne@1
|
11339 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11340 <Hsp_bit-score>2374.07</Hsp_bit-score>
|
jpayne@1
|
11341 <Hsp_score>1285</Hsp_score>
|
jpayne@1
|
11342 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
11343 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11344 <Hsp_query-to>1515</Hsp_query-to>
|
jpayne@1
|
11345 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11346 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11347 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11348 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11349 <Hsp_identity>1442</Hsp_identity>
|
jpayne@1
|
11350 <Hsp_positive>1442</Hsp_positive>
|
jpayne@1
|
11351 <Hsp_gaps>5</Hsp_gaps>
|
jpayne@1
|
11352 <Hsp_align-len>1519</Hsp_align-len>
|
jpayne@1
|
11353 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCTCAGTCCTCACTGAGTTCCGCTATCGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAGTTCAACGGCGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTGGGTGCTAACGATGGTGAATCTATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGATTCAATGTTAACGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTGACGGGGTACGATACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGCAGCAGCCCCGGATAAAGTATATGTAAATGCTGCAAACGGTCAGTTGACAACTGATGATGCGCAAAATAACACTGCAGTTGATCTATTCAAGACCACTAAATCTACTGCTGGTACCGATGACGCCAAAGCGATAGCTAATGTCATTAAGGGTGGTAAAGAGGGAGATACCTTTGATTATAAAGGCGTATCTTTTACTATTGATACAAAAGCTGGTAATGATGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGGCGGTGGTG--GT-AGTGTTAATGATGCTACCTTACAATCAAGCAGAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAATGAGAGTGCGAAACTTTCTGATTTGGAAGCAAATAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAATCCACTGGCTGCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCGCTGGGGGCAATTCAGAACCGCTTTGATTCTGCCATTACCAACCTTGGTAATACGGTAAATAA-CTTATCTTCTGCCCGTAGTCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11354 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCC-GCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11355 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||| ||||||||||||||||||||||| |||||| | || |||||||| ||| | ||||||||||| |||||||||||||||||||||||||| ||||| |||||||||| || ||||||||||||||| || ||||||||||||||||||||||| || |||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| | | |||||||||||| |||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| |||||||||||||||||||| ||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| ||||| |||||||| ||||||||||||||||| |||||||||| || || | || | |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11356 </Hsp>
|
jpayne@1
|
11357 </Hit_hsps>
|
jpayne@1
|
11358 </Hit>
|
jpayne@1
|
11359 </Iteration_hits>
|
jpayne@1
|
11360 <Iteration_stat>
|
jpayne@1
|
11361 <Statistics>
|
jpayne@1
|
11362 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11363 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11364 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11365 <Statistics_eff-space>81879912</Statistics_eff-space>
|
jpayne@1
|
11366 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11367 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11368 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11369 </Statistics>
|
jpayne@1
|
11370 </Iteration_stat>
|
jpayne@1
|
11371 </Iteration>
|
jpayne@1
|
11372 <Iteration>
|
jpayne@1
|
11373 <Iteration_iter-num>225</Iteration_iter-num>
|
jpayne@1
|
11374 <Iteration_query-ID>Query_225</Iteration_query-ID>
|
jpayne@1
|
11375 <Iteration_query-def>fliC_k_Salmonella.enterica_IIIb.50:k:z_AY353538_k,z__1488</Iteration_query-def>
|
jpayne@1
|
11376 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
11377 <Iteration_hits>
|
jpayne@1
|
11378 <Hit>
|
jpayne@1
|
11379 <Hit_num>1</Hit_num>
|
jpayne@1
|
11380 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11381 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11382 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11383 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11384 <Hit_hsps>
|
jpayne@1
|
11385 <Hsp>
|
jpayne@1
|
11386 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11387 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
11388 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
11389 <Hsp_evalue>2.99128e-143</Hsp_evalue>
|
jpayne@1
|
11390 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11391 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
11392 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11393 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
11394 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11395 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11396 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
11397 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
11398 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11399 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
11400 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
11401 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
11402 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
11403 </Hsp>
|
jpayne@1
|
11404 <Hsp>
|
jpayne@1
|
11405 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
11406 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
11407 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
11408 <Hsp_evalue>2.01605e-60</Hsp_evalue>
|
jpayne@1
|
11409 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
11410 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
11411 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
11412 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11413 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11414 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11415 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
11416 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
11417 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11418 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
11419 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCGGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11420 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11421 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11422 </Hsp>
|
jpayne@1
|
11423 </Hit_hsps>
|
jpayne@1
|
11424 </Hit>
|
jpayne@1
|
11425 </Iteration_hits>
|
jpayne@1
|
11426 <Iteration_stat>
|
jpayne@1
|
11427 <Statistics>
|
jpayne@1
|
11428 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11429 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11430 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11431 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
11432 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11433 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11434 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11435 </Statistics>
|
jpayne@1
|
11436 </Iteration_stat>
|
jpayne@1
|
11437 </Iteration>
|
jpayne@1
|
11438 <Iteration>
|
jpayne@1
|
11439 <Iteration_iter-num>226</Iteration_iter-num>
|
jpayne@1
|
11440 <Iteration_query-ID>Query_226</Iteration_query-ID>
|
jpayne@1
|
11441 <Iteration_query-def>fliC_k_Salmonella.enterica_IIIb.61:k:1,5_AY353539_k,z__1488</Iteration_query-def>
|
jpayne@1
|
11442 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
11443 <Iteration_hits>
|
jpayne@1
|
11444 <Hit>
|
jpayne@1
|
11445 <Hit_num>1</Hit_num>
|
jpayne@1
|
11446 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11447 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11448 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11449 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11450 <Hit_hsps>
|
jpayne@1
|
11451 <Hsp>
|
jpayne@1
|
11452 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11453 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
11454 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
11455 <Hsp_evalue>2.99128e-143</Hsp_evalue>
|
jpayne@1
|
11456 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11457 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
11458 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11459 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
11460 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11461 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11462 <Hsp_identity>411</Hsp_identity>
|
jpayne@1
|
11463 <Hsp_positive>411</Hsp_positive>
|
jpayne@1
|
11464 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11465 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
11466 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGACATCGATCTG</Hsp_qseq>
|
jpayne@1
|
11467 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
11468 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||| || ||||||||||</Hsp_midline>
|
jpayne@1
|
11469 </Hsp>
|
jpayne@1
|
11470 <Hsp>
|
jpayne@1
|
11471 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
11472 <Hsp_bit-score>207.945</Hsp_bit-score>
|
jpayne@1
|
11473 <Hsp_score>112</Hsp_score>
|
jpayne@1
|
11474 <Hsp_evalue>2.03036e-55</Hsp_evalue>
|
jpayne@1
|
11475 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
11476 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
11477 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
11478 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11479 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11480 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11481 <Hsp_identity>208</Hsp_identity>
|
jpayne@1
|
11482 <Hsp_positive>208</Hsp_positive>
|
jpayne@1
|
11483 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11484 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
11485 <Hsp_qseq>AATTGATGCTGCGTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACTTGGGCAACACCGTAAWCAACYTGACTTCTGCCCGTAGCYGTATCGAAGATTCCGACTATGCGWCCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAAGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11486 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11487 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||| | ||||| || |||| ||| ||| || ||||||||| ||||||||||| | |||||||| | ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11488 </Hsp>
|
jpayne@1
|
11489 </Hit_hsps>
|
jpayne@1
|
11490 </Hit>
|
jpayne@1
|
11491 </Iteration_hits>
|
jpayne@1
|
11492 <Iteration_stat>
|
jpayne@1
|
11493 <Statistics>
|
jpayne@1
|
11494 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11495 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11496 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11497 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
11498 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11499 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11500 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11501 </Statistics>
|
jpayne@1
|
11502 </Iteration_stat>
|
jpayne@1
|
11503 </Iteration>
|
jpayne@1
|
11504 <Iteration>
|
jpayne@1
|
11505 <Iteration_iter-num>227</Iteration_iter-num>
|
jpayne@1
|
11506 <Iteration_query-ID>Query_227</Iteration_query-ID>
|
jpayne@1
|
11507 <Iteration_query-def>fliC_k_Salmonella.enterica_IIIb.38:k:z53_AY353540_k,z__1485</Iteration_query-def>
|
jpayne@1
|
11508 <Iteration_query-len>1485</Iteration_query-len>
|
jpayne@1
|
11509 <Iteration_hits>
|
jpayne@1
|
11510 <Hit>
|
jpayne@1
|
11511 <Hit_num>1</Hit_num>
|
jpayne@1
|
11512 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11513 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11514 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11515 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11516 <Hit_hsps>
|
jpayne@1
|
11517 <Hsp>
|
jpayne@1
|
11518 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11519 <Hsp_bit-score>510.796</Hsp_bit-score>
|
jpayne@1
|
11520 <Hsp_score>276</Hsp_score>
|
jpayne@1
|
11521 <Hsp_evalue>1.37908e-146</Hsp_evalue>
|
jpayne@1
|
11522 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11523 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
11524 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11525 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
11526 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11527 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11528 <Hsp_identity>413</Hsp_identity>
|
jpayne@1
|
11529 <Hsp_positive>413</Hsp_positive>
|
jpayne@1
|
11530 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11531 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
11532 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
11533 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
11534 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
11535 </Hsp>
|
jpayne@1
|
11536 <Hsp>
|
jpayne@1
|
11537 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
11538 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
11539 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
11540 <Hsp_evalue>2.01194e-60</Hsp_evalue>
|
jpayne@1
|
11541 <Hsp_query-from>1230</Hsp_query-from>
|
jpayne@1
|
11542 <Hsp_query-to>1485</Hsp_query-to>
|
jpayne@1
|
11543 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
11544 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11545 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11546 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11547 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
11548 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
11549 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11550 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
11551 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11552 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11553 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11554 </Hsp>
|
jpayne@1
|
11555 </Hit_hsps>
|
jpayne@1
|
11556 </Hit>
|
jpayne@1
|
11557 </Iteration_hits>
|
jpayne@1
|
11558 <Iteration_stat>
|
jpayne@1
|
11559 <Statistics>
|
jpayne@1
|
11560 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11561 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11562 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11563 <Statistics_eff-space>80239032</Statistics_eff-space>
|
jpayne@1
|
11564 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11565 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11566 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11567 </Statistics>
|
jpayne@1
|
11568 </Iteration_stat>
|
jpayne@1
|
11569 </Iteration>
|
jpayne@1
|
11570 <Iteration>
|
jpayne@1
|
11571 <Iteration_iter-num>228</Iteration_iter-num>
|
jpayne@1
|
11572 <Iteration_query-ID>Query_228</Iteration_query-ID>
|
jpayne@1
|
11573 <Iteration_query-def>fliC_k_Salmonella.enterica_IIIb.16:k:e,n,x,z15_AY353541_k,z__1485</Iteration_query-def>
|
jpayne@1
|
11574 <Iteration_query-len>1485</Iteration_query-len>
|
jpayne@1
|
11575 <Iteration_hits>
|
jpayne@1
|
11576 <Hit>
|
jpayne@1
|
11577 <Hit_num>1</Hit_num>
|
jpayne@1
|
11578 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11579 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11580 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11581 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11582 <Hit_hsps>
|
jpayne@1
|
11583 <Hsp>
|
jpayne@1
|
11584 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11585 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
11586 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
11587 <Hsp_evalue>6.41623e-145</Hsp_evalue>
|
jpayne@1
|
11588 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11589 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
11590 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11591 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
11592 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11593 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11594 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
11595 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
11596 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11597 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
11598 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
11599 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
11600 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
11601 </Hsp>
|
jpayne@1
|
11602 <Hsp>
|
jpayne@1
|
11603 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
11604 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
11605 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
11606 <Hsp_evalue>2.01194e-60</Hsp_evalue>
|
jpayne@1
|
11607 <Hsp_query-from>1230</Hsp_query-from>
|
jpayne@1
|
11608 <Hsp_query-to>1485</Hsp_query-to>
|
jpayne@1
|
11609 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
11610 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11611 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11612 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11613 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
11614 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
11615 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11616 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
11617 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11618 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11619 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11620 </Hsp>
|
jpayne@1
|
11621 </Hit_hsps>
|
jpayne@1
|
11622 </Hit>
|
jpayne@1
|
11623 </Iteration_hits>
|
jpayne@1
|
11624 <Iteration_stat>
|
jpayne@1
|
11625 <Statistics>
|
jpayne@1
|
11626 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11627 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11628 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11629 <Statistics_eff-space>80239032</Statistics_eff-space>
|
jpayne@1
|
11630 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11631 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11632 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11633 </Statistics>
|
jpayne@1
|
11634 </Iteration_stat>
|
jpayne@1
|
11635 </Iteration>
|
jpayne@1
|
11636 <Iteration>
|
jpayne@1
|
11637 <Iteration_iter-num>229</Iteration_iter-num>
|
jpayne@1
|
11638 <Iteration_query-ID>Query_229</Iteration_query-ID>
|
jpayne@1
|
11639 <Iteration_query-def>fliC_k_Salmonella.enterica_IIIb.42:k:z35_AY353542_k,z__1485</Iteration_query-def>
|
jpayne@1
|
11640 <Iteration_query-len>1485</Iteration_query-len>
|
jpayne@1
|
11641 <Iteration_hits>
|
jpayne@1
|
11642 <Hit>
|
jpayne@1
|
11643 <Hit_num>1</Hit_num>
|
jpayne@1
|
11644 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11645 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11646 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11647 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11648 <Hit_hsps>
|
jpayne@1
|
11649 <Hsp>
|
jpayne@1
|
11650 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11651 <Hsp_bit-score>510.796</Hsp_bit-score>
|
jpayne@1
|
11652 <Hsp_score>276</Hsp_score>
|
jpayne@1
|
11653 <Hsp_evalue>1.37908e-146</Hsp_evalue>
|
jpayne@1
|
11654 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11655 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
11656 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11657 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
11658 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11659 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11660 <Hsp_identity>413</Hsp_identity>
|
jpayne@1
|
11661 <Hsp_positive>413</Hsp_positive>
|
jpayne@1
|
11662 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11663 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
11664 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
11665 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
11666 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || || || |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
11667 </Hsp>
|
jpayne@1
|
11668 <Hsp>
|
jpayne@1
|
11669 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
11670 <Hsp_bit-score>224.565</Hsp_bit-score>
|
jpayne@1
|
11671 <Hsp_score>121</Hsp_score>
|
jpayne@1
|
11672 <Hsp_evalue>2.01194e-60</Hsp_evalue>
|
jpayne@1
|
11673 <Hsp_query-from>1230</Hsp_query-from>
|
jpayne@1
|
11674 <Hsp_query-to>1485</Hsp_query-to>
|
jpayne@1
|
11675 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
11676 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11677 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11678 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11679 <Hsp_identity>212</Hsp_identity>
|
jpayne@1
|
11680 <Hsp_positive>212</Hsp_positive>
|
jpayne@1
|
11681 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
11682 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
11683 <Hsp_qseq>AATTGATGCTGCGCTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11684 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11685 <Hsp_midline>||||||| |||| || || | || ||| | ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| || |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11686 </Hsp>
|
jpayne@1
|
11687 </Hit_hsps>
|
jpayne@1
|
11688 </Hit>
|
jpayne@1
|
11689 </Iteration_hits>
|
jpayne@1
|
11690 <Iteration_stat>
|
jpayne@1
|
11691 <Statistics>
|
jpayne@1
|
11692 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11693 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11694 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11695 <Statistics_eff-space>80239032</Statistics_eff-space>
|
jpayne@1
|
11696 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11697 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11698 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11699 </Statistics>
|
jpayne@1
|
11700 </Iteration_stat>
|
jpayne@1
|
11701 </Iteration>
|
jpayne@1
|
11702 <Iteration>
|
jpayne@1
|
11703 <Iteration_iter-num>230</Iteration_iter-num>
|
jpayne@1
|
11704 <Iteration_query-ID>Query_230</Iteration_query-ID>
|
jpayne@1
|
11705 <Iteration_query-def>fliC_z4,z32_Salmonella.enterica_IIIa.18:z4,z32:-_AY353543_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
11706 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
11707 <Iteration_hits>
|
jpayne@1
|
11708 <Hit>
|
jpayne@1
|
11709 <Hit_num>1</Hit_num>
|
jpayne@1
|
11710 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11711 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11712 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11713 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11714 <Hit_hsps>
|
jpayne@1
|
11715 <Hsp>
|
jpayne@1
|
11716 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11717 <Hsp_bit-score>427.696</Hsp_bit-score>
|
jpayne@1
|
11718 <Hsp_score>231</Hsp_score>
|
jpayne@1
|
11719 <Hsp_evalue>1.21837e-121</Hsp_evalue>
|
jpayne@1
|
11720 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11721 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
11722 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11723 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
11724 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11725 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11726 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
11727 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
11728 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11729 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
11730 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
11731 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
11732 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
11733 </Hsp>
|
jpayne@1
|
11734 <Hsp>
|
jpayne@1
|
11735 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
11736 <Hsp_bit-score>228.258</Hsp_bit-score>
|
jpayne@1
|
11737 <Hsp_score>123</Hsp_score>
|
jpayne@1
|
11738 <Hsp_evalue>1.32632e-61</Hsp_evalue>
|
jpayne@1
|
11739 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
11740 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
11741 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
11742 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11743 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11744 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11745 <Hsp_identity>173</Hsp_identity>
|
jpayne@1
|
11746 <Hsp_positive>173</Hsp_positive>
|
jpayne@1
|
11747 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11748 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
11749 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACGGTAAATAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11750 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11751 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| ||||||| || ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11752 </Hsp>
|
jpayne@1
|
11753 </Hit_hsps>
|
jpayne@1
|
11754 </Hit>
|
jpayne@1
|
11755 </Iteration_hits>
|
jpayne@1
|
11756 <Iteration_stat>
|
jpayne@1
|
11757 <Statistics>
|
jpayne@1
|
11758 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11759 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11760 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11761 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
11762 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11763 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11764 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11765 </Statistics>
|
jpayne@1
|
11766 </Iteration_stat>
|
jpayne@1
|
11767 </Iteration>
|
jpayne@1
|
11768 <Iteration>
|
jpayne@1
|
11769 <Iteration_iter-num>231</Iteration_iter-num>
|
jpayne@1
|
11770 <Iteration_query-ID>Query_231</Iteration_query-ID>
|
jpayne@1
|
11771 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_I.8,20:z4,z23:-_AY353544_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
11772 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
11773 <Iteration_hits>
|
jpayne@1
|
11774 <Hit>
|
jpayne@1
|
11775 <Hit_num>1</Hit_num>
|
jpayne@1
|
11776 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11777 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11778 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11779 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11780 <Hit_hsps>
|
jpayne@1
|
11781 <Hsp>
|
jpayne@1
|
11782 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11783 <Hsp_bit-score>431.39</Hsp_bit-score>
|
jpayne@1
|
11784 <Hsp_score>233</Hsp_score>
|
jpayne@1
|
11785 <Hsp_evalue>9.41856e-123</Hsp_evalue>
|
jpayne@1
|
11786 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11787 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
11788 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11789 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
11790 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11791 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11792 <Hsp_identity>323</Hsp_identity>
|
jpayne@1
|
11793 <Hsp_positive>323</Hsp_positive>
|
jpayne@1
|
11794 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11795 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
11796 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTAAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
11797 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
11798 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| | || ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
11799 </Hsp>
|
jpayne@1
|
11800 <Hsp>
|
jpayne@1
|
11801 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
11802 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
11803 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
11804 <Hsp_evalue>2.87097e-58</Hsp_evalue>
|
jpayne@1
|
11805 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
11806 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
11807 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
11808 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11809 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11810 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11811 <Hsp_identity>171</Hsp_identity>
|
jpayne@1
|
11812 <Hsp_positive>171</Hsp_positive>
|
jpayne@1
|
11813 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11814 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
11815 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11816 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11817 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11818 </Hsp>
|
jpayne@1
|
11819 </Hit_hsps>
|
jpayne@1
|
11820 </Hit>
|
jpayne@1
|
11821 </Iteration_hits>
|
jpayne@1
|
11822 <Iteration_stat>
|
jpayne@1
|
11823 <Statistics>
|
jpayne@1
|
11824 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11825 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11826 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11827 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
11828 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11829 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11830 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11831 </Statistics>
|
jpayne@1
|
11832 </Iteration_stat>
|
jpayne@1
|
11833 </Iteration>
|
jpayne@1
|
11834 <Iteration>
|
jpayne@1
|
11835 <Iteration_iter-num>232</Iteration_iter-num>
|
jpayne@1
|
11836 <Iteration_query-ID>Query_232</Iteration_query-ID>
|
jpayne@1
|
11837 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_IIIa.62:z4,z23:-_AY353545_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
11838 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
11839 <Iteration_hits>
|
jpayne@1
|
11840 <Hit>
|
jpayne@1
|
11841 <Hit_num>1</Hit_num>
|
jpayne@1
|
11842 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11843 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11844 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11845 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11846 <Hit_hsps>
|
jpayne@1
|
11847 <Hsp>
|
jpayne@1
|
11848 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11849 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
11850 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
11851 <Hsp_evalue>2.61871e-123</Hsp_evalue>
|
jpayne@1
|
11852 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11853 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
11854 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11855 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
11856 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11857 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11858 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
11859 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
11860 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11861 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
11862 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
11863 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
11864 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
11865 </Hsp>
|
jpayne@1
|
11866 <Hsp>
|
jpayne@1
|
11867 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
11868 <Hsp_bit-score>228.258</Hsp_bit-score>
|
jpayne@1
|
11869 <Hsp_score>123</Hsp_score>
|
jpayne@1
|
11870 <Hsp_evalue>1.32632e-61</Hsp_evalue>
|
jpayne@1
|
11871 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
11872 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
11873 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
11874 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11875 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11876 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11877 <Hsp_identity>173</Hsp_identity>
|
jpayne@1
|
11878 <Hsp_positive>173</Hsp_positive>
|
jpayne@1
|
11879 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11880 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
11881 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACGGTAAATAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11882 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11883 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| ||||||| || ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11884 </Hsp>
|
jpayne@1
|
11885 </Hit_hsps>
|
jpayne@1
|
11886 </Hit>
|
jpayne@1
|
11887 </Iteration_hits>
|
jpayne@1
|
11888 <Iteration_stat>
|
jpayne@1
|
11889 <Statistics>
|
jpayne@1
|
11890 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11891 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11892 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11893 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
11894 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11895 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11896 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11897 </Statistics>
|
jpayne@1
|
11898 </Iteration_stat>
|
jpayne@1
|
11899 </Iteration>
|
jpayne@1
|
11900 <Iteration>
|
jpayne@1
|
11901 <Iteration_iter-num>233</Iteration_iter-num>
|
jpayne@1
|
11902 <Iteration_query-ID>Query_233</Iteration_query-ID>
|
jpayne@1
|
11903 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_IIIa.18:z4,z23:-_AY353546_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
11904 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
11905 <Iteration_hits>
|
jpayne@1
|
11906 <Hit>
|
jpayne@1
|
11907 <Hit_num>1</Hit_num>
|
jpayne@1
|
11908 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11909 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11910 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11911 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11912 <Hit_hsps>
|
jpayne@1
|
11913 <Hsp>
|
jpayne@1
|
11914 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11915 <Hsp_bit-score>427.696</Hsp_bit-score>
|
jpayne@1
|
11916 <Hsp_score>231</Hsp_score>
|
jpayne@1
|
11917 <Hsp_evalue>1.21837e-121</Hsp_evalue>
|
jpayne@1
|
11918 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11919 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
11920 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11921 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
11922 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11923 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11924 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
11925 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
11926 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11927 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
11928 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAATAAATCCCAGTCCGCTCTGGGAACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
11929 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
11930 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
11931 </Hsp>
|
jpayne@1
|
11932 <Hsp>
|
jpayne@1
|
11933 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
11934 <Hsp_bit-score>228.258</Hsp_bit-score>
|
jpayne@1
|
11935 <Hsp_score>123</Hsp_score>
|
jpayne@1
|
11936 <Hsp_evalue>1.32632e-61</Hsp_evalue>
|
jpayne@1
|
11937 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
11938 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
11939 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
11940 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
11941 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11942 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11943 <Hsp_identity>173</Hsp_identity>
|
jpayne@1
|
11944 <Hsp_positive>173</Hsp_positive>
|
jpayne@1
|
11945 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11946 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
11947 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACGGTAAATAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
11948 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
11949 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| ||||||| || ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
11950 </Hsp>
|
jpayne@1
|
11951 </Hit_hsps>
|
jpayne@1
|
11952 </Hit>
|
jpayne@1
|
11953 </Iteration_hits>
|
jpayne@1
|
11954 <Iteration_stat>
|
jpayne@1
|
11955 <Statistics>
|
jpayne@1
|
11956 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
11957 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
11958 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
11959 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
11960 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
11961 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
11962 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
11963 </Statistics>
|
jpayne@1
|
11964 </Iteration_stat>
|
jpayne@1
|
11965 </Iteration>
|
jpayne@1
|
11966 <Iteration>
|
jpayne@1
|
11967 <Iteration_iter-num>234</Iteration_iter-num>
|
jpayne@1
|
11968 <Iteration_query-ID>Query_234</Iteration_query-ID>
|
jpayne@1
|
11969 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_IIIa.41:z4,z23:-_AY353547_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
11970 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
11971 <Iteration_hits>
|
jpayne@1
|
11972 <Hit>
|
jpayne@1
|
11973 <Hit_num>1</Hit_num>
|
jpayne@1
|
11974 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
11975 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
11976 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
11977 <Hit_len>1962</Hit_len>
|
jpayne@1
|
11978 <Hit_hsps>
|
jpayne@1
|
11979 <Hsp>
|
jpayne@1
|
11980 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
11981 <Hsp_bit-score>422.156</Hsp_bit-score>
|
jpayne@1
|
11982 <Hsp_score>228</Hsp_score>
|
jpayne@1
|
11983 <Hsp_evalue>5.66851e-120</Hsp_evalue>
|
jpayne@1
|
11984 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
11985 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
11986 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
11987 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
11988 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
11989 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
11990 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
11991 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
11992 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
11993 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
11994 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTCAATAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTCTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATCGCGCAGACTACCGAAGGCGCATTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAGCAAACGGCTCGAACTCTGGTTCAGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACCGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGTGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
11995 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
11996 <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||| |||||| | ||| | ||||||| |||||||| || || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| || ||||||||| |||||||||||||||||||||||||||| || || || |||||||| || ||||| || |||| ||||| ||||||||||||||||||||||||||||||||||||||||| | ||||| | ||||||| ||| ||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || || | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || |||||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
11997 </Hsp>
|
jpayne@1
|
11998 <Hsp>
|
jpayne@1
|
11999 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12000 <Hsp_bit-score>228.258</Hsp_bit-score>
|
jpayne@1
|
12001 <Hsp_score>123</Hsp_score>
|
jpayne@1
|
12002 <Hsp_evalue>1.32632e-61</Hsp_evalue>
|
jpayne@1
|
12003 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
12004 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
12005 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
12006 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
12007 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12008 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12009 <Hsp_identity>173</Hsp_identity>
|
jpayne@1
|
12010 <Hsp_positive>173</Hsp_positive>
|
jpayne@1
|
12011 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12012 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
12013 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACGGTAAATAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
12014 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
12015 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| ||||||| || ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12016 </Hsp>
|
jpayne@1
|
12017 </Hit_hsps>
|
jpayne@1
|
12018 </Hit>
|
jpayne@1
|
12019 </Iteration_hits>
|
jpayne@1
|
12020 <Iteration_stat>
|
jpayne@1
|
12021 <Statistics>
|
jpayne@1
|
12022 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12023 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12024 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12025 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
12026 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12027 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12028 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12029 </Statistics>
|
jpayne@1
|
12030 </Iteration_stat>
|
jpayne@1
|
12031 </Iteration>
|
jpayne@1
|
12032 <Iteration>
|
jpayne@1
|
12033 <Iteration_iter-num>235</Iteration_iter-num>
|
jpayne@1
|
12034 <Iteration_query-ID>Query_235</Iteration_query-ID>
|
jpayne@1
|
12035 <Iteration_query-def>fliC_z4,z32_Salmonella.enterica_IV.48:z4,z32:-_AY353548_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
12036 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
12037 <Iteration_hits>
|
jpayne@1
|
12038 <Hit>
|
jpayne@1
|
12039 <Hit_num>1</Hit_num>
|
jpayne@1
|
12040 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12041 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12042 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12043 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12044 <Hit_hsps>
|
jpayne@1
|
12045 <Hsp>
|
jpayne@1
|
12046 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12047 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
12048 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
12049 <Hsp_evalue>1.20978e-126</Hsp_evalue>
|
jpayne@1
|
12050 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12051 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
12052 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12053 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
12054 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12055 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12056 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
12057 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
12058 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12059 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
12060 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCAAACGACGGTATTTCCATTGCGCAGACGACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCGAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACTGATTTTAACGGTAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGCGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
12061 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
12062 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || ||| | ||||||||| ||||| | ||||| ||| ||| || |||||||| || || || || ||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
12063 </Hsp>
|
jpayne@1
|
12064 <Hsp>
|
jpayne@1
|
12065 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12066 <Hsp_bit-score>195.019</Hsp_bit-score>
|
jpayne@1
|
12067 <Hsp_score>105</Hsp_score>
|
jpayne@1
|
12068 <Hsp_evalue>1.34522e-51</Hsp_evalue>
|
jpayne@1
|
12069 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
12070 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
12071 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
12072 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
12073 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12074 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12075 <Hsp_identity>167</Hsp_identity>
|
jpayne@1
|
12076 <Hsp_positive>167</Hsp_positive>
|
jpayne@1
|
12077 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12078 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
12079 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGATTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCTGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
12080 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
12081 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | || ||||| || ||||| || || |||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12082 </Hsp>
|
jpayne@1
|
12083 </Hit_hsps>
|
jpayne@1
|
12084 </Hit>
|
jpayne@1
|
12085 </Iteration_hits>
|
jpayne@1
|
12086 <Iteration_stat>
|
jpayne@1
|
12087 <Statistics>
|
jpayne@1
|
12088 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12089 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12090 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12091 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
12092 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12093 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12094 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12095 </Statistics>
|
jpayne@1
|
12096 </Iteration_stat>
|
jpayne@1
|
12097 </Iteration>
|
jpayne@1
|
12098 <Iteration>
|
jpayne@1
|
12099 <Iteration_iter-num>236</Iteration_iter-num>
|
jpayne@1
|
12100 <Iteration_query-ID>Query_236</Iteration_query-ID>
|
jpayne@1
|
12101 <Iteration_query-def>fliC_z4,z23_Salmonella.enterica_I.47:z4,z23:-_AY353549_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
12102 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
12103 <Iteration_hits>
|
jpayne@1
|
12104 <Hit>
|
jpayne@1
|
12105 <Hit_num>1</Hit_num>
|
jpayne@1
|
12106 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12107 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12108 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12109 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12110 <Hit_hsps>
|
jpayne@1
|
12111 <Hsp>
|
jpayne@1
|
12112 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12113 <Hsp_bit-score>431.39</Hsp_bit-score>
|
jpayne@1
|
12114 <Hsp_score>233</Hsp_score>
|
jpayne@1
|
12115 <Hsp_evalue>9.41856e-123</Hsp_evalue>
|
jpayne@1
|
12116 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12117 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
12118 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12119 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
12120 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12121 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12122 <Hsp_identity>323</Hsp_identity>
|
jpayne@1
|
12123 <Hsp_positive>323</Hsp_positive>
|
jpayne@1
|
12124 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12125 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
12126 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTAAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
12127 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
12128 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| | || ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
12129 </Hsp>
|
jpayne@1
|
12130 <Hsp>
|
jpayne@1
|
12131 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12132 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
12133 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
12134 <Hsp_evalue>2.87097e-58</Hsp_evalue>
|
jpayne@1
|
12135 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
12136 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
12137 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
12138 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
12139 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12140 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12141 <Hsp_identity>171</Hsp_identity>
|
jpayne@1
|
12142 <Hsp_positive>171</Hsp_positive>
|
jpayne@1
|
12143 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12144 <Hsp_align-len>198</Hsp_align-len>
|
jpayne@1
|
12145 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
12146 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
12147 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12148 </Hsp>
|
jpayne@1
|
12149 </Hit_hsps>
|
jpayne@1
|
12150 </Hit>
|
jpayne@1
|
12151 </Iteration_hits>
|
jpayne@1
|
12152 <Iteration_stat>
|
jpayne@1
|
12153 <Statistics>
|
jpayne@1
|
12154 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12155 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12156 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12157 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
12158 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12159 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12160 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12161 </Statistics>
|
jpayne@1
|
12162 </Iteration_stat>
|
jpayne@1
|
12163 </Iteration>
|
jpayne@1
|
12164 <Iteration>
|
jpayne@1
|
12165 <Iteration_iter-num>237</Iteration_iter-num>
|
jpayne@1
|
12166 <Iteration_query-ID>Query_237</Iteration_query-ID>
|
jpayne@1
|
12167 <Iteration_query-def>fliC_z4,z32_16_z4,z32_--str_ANHR01000045_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
12168 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
12169 <Iteration_hits>
|
jpayne@1
|
12170 <Hit>
|
jpayne@1
|
12171 <Hit_num>1</Hit_num>
|
jpayne@1
|
12172 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12173 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12174 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12175 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12176 <Hit_hsps>
|
jpayne@1
|
12177 <Hsp>
|
jpayne@1
|
12178 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12179 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
12180 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
12181 <Hsp_evalue>2.57531e-128</Hsp_evalue>
|
jpayne@1
|
12182 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12183 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
12184 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12185 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
12186 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12187 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12188 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
12189 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
12190 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12191 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
12192 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATTTCCATTGCGCAGACGACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCGAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACTGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGCGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
12193 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
12194 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || ||| | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || || ||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
12195 </Hsp>
|
jpayne@1
|
12196 </Hit_hsps>
|
jpayne@1
|
12197 </Hit>
|
jpayne@1
|
12198 </Iteration_hits>
|
jpayne@1
|
12199 <Iteration_stat>
|
jpayne@1
|
12200 <Statistics>
|
jpayne@1
|
12201 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12202 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12203 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12204 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
12205 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12206 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12207 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12208 </Statistics>
|
jpayne@1
|
12209 </Iteration_stat>
|
jpayne@1
|
12210 </Iteration>
|
jpayne@1
|
12211 <Iteration>
|
jpayne@1
|
12212 <Iteration_iter-num>238</Iteration_iter-num>
|
jpayne@1
|
12213 <Iteration_query-ID>Query_238</Iteration_query-ID>
|
jpayne@1
|
12214 <Iteration_query-def>fliC_i_4,[5],12_i_-str_ABAO01000026_r,i__1476</Iteration_query-def>
|
jpayne@1
|
12215 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
12216 <Iteration_hits>
|
jpayne@1
|
12217 <Hit>
|
jpayne@1
|
12218 <Hit_num>1</Hit_num>
|
jpayne@1
|
12219 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12220 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12221 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12222 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12223 <Hit_hsps>
|
jpayne@1
|
12224 <Hsp>
|
jpayne@1
|
12225 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12226 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
12227 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
12228 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
12229 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12230 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
12231 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12232 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
12233 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12234 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12235 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
12236 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
12237 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
12238 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
12239 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
12240 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
12241 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
12242 </Hsp>
|
jpayne@1
|
12243 <Hsp>
|
jpayne@1
|
12244 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12245 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
12246 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
12247 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
12248 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
12249 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
12250 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
12251 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12252 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12253 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12254 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
12255 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
12256 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
12257 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
12258 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12259 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12260 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12261 </Hsp>
|
jpayne@1
|
12262 </Hit_hsps>
|
jpayne@1
|
12263 </Hit>
|
jpayne@1
|
12264 </Iteration_hits>
|
jpayne@1
|
12265 <Iteration_stat>
|
jpayne@1
|
12266 <Statistics>
|
jpayne@1
|
12267 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12268 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12269 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12270 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
12271 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12272 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12273 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12274 </Statistics>
|
jpayne@1
|
12275 </Iteration_stat>
|
jpayne@1
|
12276 </Iteration>
|
jpayne@1
|
12277 <Iteration>
|
jpayne@1
|
12278 <Iteration_iter-num>239</Iteration_iter-num>
|
jpayne@1
|
12279 <Iteration_query-ID>Query_239</Iteration_query-ID>
|
jpayne@1
|
12280 <Iteration_query-def>fliC_g,z51_50_g,z51_-str_AOXJ01000042_g,m__1503</Iteration_query-def>
|
jpayne@1
|
12281 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
12282 <Iteration_hits>
|
jpayne@1
|
12283 <Hit>
|
jpayne@1
|
12284 <Hit_num>1</Hit_num>
|
jpayne@1
|
12285 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12286 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12287 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12288 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12289 <Hit_hsps>
|
jpayne@1
|
12290 <Hsp>
|
jpayne@1
|
12291 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12292 <Hsp_bit-score>1687.11</Hsp_bit-score>
|
jpayne@1
|
12293 <Hsp_score>913</Hsp_score>
|
jpayne@1
|
12294 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
12295 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12296 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
12297 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12298 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12299 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12300 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12301 <Hsp_identity>1312</Hsp_identity>
|
jpayne@1
|
12302 <Hsp_positive>1312</Hsp_positive>
|
jpayne@1
|
12303 <Hsp_gaps>9</Hsp_gaps>
|
jpayne@1
|
12304 <Hsp_align-len>1509</Hsp_align-len>
|
jpayne@1
|
12305 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCTCACTGAGTTCCGCTATCGAGCGTTTGTCCTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATCAAAGGCCTGACTCAGGCTTCCCGTAATGCGAACGACGGTATCTCCATTGCGCAGACCACCGAAGGGGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCAACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATTCAGGATGAAATTCAGCAGCG-CTTATCGGAAATTGACCGTGTTTCTAACCAGACTCAGTTTAACGGTGTTAAAGTCCTGTCTCAGGATAATCAGATGAAAATTCAGGTGGGCGCTAACGATGGCGAGACTATTACCATTGATCTACAAAAAATTGATGTGAAAAGTCTTGGTCTGGATGGGTTCAACGTGAATGGGCCTAAACAAGCAACCGCTGGG-GATTTGAAATCTAATTTCAAAAACGTTACTGGTTATGATACGTATGCTGTTGGTGCTGATAGTTATCGTGTAGATATTAATTCTGGAGC---AGTAACTGATGATGCTGGTACCG-ATAAGATTTACGTAAACGCAGCAAACGGTAAACTCACAACTGATGATGCACAGAATAACACCCCAGTTGATCTATTTAAGACAACAAAATCATCAGCCGGTACAGCTGAATCTAAAGCAATTGCTACCGCTATTAAAGGTGGTAAAGAAGGAGATACTTTTGATTATAAAGGTGTTTCTTTTACCATTGATACAAAGAATGGCACTGACGGTAATGGTACAGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTGACTGTCGCTGACATTACCACGGGTGCGGCAGACGTTAATGCGGCAACCTTACAATCAAGTAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACCTTTGATGATAAAACGAAAAACGAAGGTGCGAAATTATCTGATTTAGAAGCAAATAATGCTGTTAAAGGTGAAAGTAAAATCACGGTAAACGGTGCTGAATATACAGCTAACGCTGAGGGTGATAAAATTACCTTAGCAGGTAAAACCATGTTTATTGATAAGACAGCCTCTGGCGTTAGCACATTAATTAATGAAGATGCTGCTGCAGCTAAGAAGAGTACCGCTAATCCACTCGCTTCAATTGATTCTGCATTGTCAAAAGTGGATGCTGTACGTTCTTCATTGGGGGCTATTCAGAACCGTTTTGATTCTGCCATTACCAACTTGGGTAATACGGTAAATAATCTGACTTCCGCACGTAGCCGTATCGAAGATGCTGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCAGGGACTTCTGTTCTGGCACAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12306 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAA-GAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAG-TGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGC-ACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12307 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||| ||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||| || |||||||| || || |||||||||||||| ||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || ||||| || || |||||||| |||||||| ||||||||||||||||||||||||||||| || ||||||||||| ||||| || ||||||||||| || || |||||||| ||||| |||||||||||||||||||| ||||| || ||||||||||| || |||||||| ||| |||| || | |||| ||| ||||||| | ||||| || ||||| ||||| || || ||||| | ||||| |||| |||||||||||||||||||| || || ||||||||||||||| | |||| |||| | || ||||| |||||||||||| | | |||||||| ||||| |||| ||||| | ||| | ||||| ||||| || ||||| | || ||||| | |||| | || || || |||| || ||||| |||||||| ||||||||||| ||||||||||||||||| |||||||| ||||||||||| ||| | ||||||||||||||| ||||||||||||||||||||||||||||||||||| ||||||||||| |||||| | ||||| || | ||||||| || |||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||| |||||||| | |||||||| |||||||| ||||||||||| || ||||||||||| || ||||| || ||||||||||| |||||||| | ||||||||| | |||||||| || |||||||||||||||||||| ||||| |||||||| || |||||||| |||||||| ||||| ||||| ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||| || || |||||||| ||||||| ||||| |||||||||||||| |||||||||||| | || |||||||||| ||||||| ||||| ||||||||||||||||||||||||||||| || ||||| || || |||||| |||||||||||||||||||| || ||||| |||||||| ||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12308 </Hsp>
|
jpayne@1
|
12309 </Hit_hsps>
|
jpayne@1
|
12310 </Hit>
|
jpayne@1
|
12311 </Iteration_hits>
|
jpayne@1
|
12312 <Iteration_stat>
|
jpayne@1
|
12313 <Statistics>
|
jpayne@1
|
12314 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12315 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12316 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12317 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
12318 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12319 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12320 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12321 </Statistics>
|
jpayne@1
|
12322 </Iteration_stat>
|
jpayne@1
|
12323 </Iteration>
|
jpayne@1
|
12324 <Iteration>
|
jpayne@1
|
12325 <Iteration_iter-num>240</Iteration_iter-num>
|
jpayne@1
|
12326 <Iteration_query-ID>Query_240</Iteration_query-ID>
|
jpayne@1
|
12327 <Iteration_query-def>fliC_z4,z24_Albanystr_AOZW01000055_z4,z23__1269</Iteration_query-def>
|
jpayne@1
|
12328 <Iteration_query-len>1269</Iteration_query-len>
|
jpayne@1
|
12329 <Iteration_hits>
|
jpayne@1
|
12330 <Hit>
|
jpayne@1
|
12331 <Hit_num>1</Hit_num>
|
jpayne@1
|
12332 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12333 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12334 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12335 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12336 <Hit_hsps>
|
jpayne@1
|
12337 <Hsp>
|
jpayne@1
|
12338 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12339 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
12340 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
12341 <Hsp_evalue>4.35114e-126</Hsp_evalue>
|
jpayne@1
|
12342 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12343 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
12344 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12345 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
12346 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12347 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12348 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
12349 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
12350 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12351 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
12352 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTAAACGAAATTAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
12353 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
12354 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| | || ||||||||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
12355 </Hsp>
|
jpayne@1
|
12356 <Hsp>
|
jpayne@1
|
12357 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12358 <Hsp_bit-score>193.172</Hsp_bit-score>
|
jpayne@1
|
12359 <Hsp_score>104</Hsp_score>
|
jpayne@1
|
12360 <Hsp_evalue>4.83826e-51</Hsp_evalue>
|
jpayne@1
|
12361 <Hsp_query-from>1070</Hsp_query-from>
|
jpayne@1
|
12362 <Hsp_query-to>1269</Hsp_query-to>
|
jpayne@1
|
12363 <Hsp_hit-from>437</Hsp_hit-from>
|
jpayne@1
|
12364 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12365 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12366 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12367 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
12368 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
12369 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12370 <Hsp_align-len>200</Hsp_align-len>
|
jpayne@1
|
12371 <Hsp_qseq>TGGGGGCGGTGCAGAACCGTTTTGAATCTGCTATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12372 <Hsp_hseq>TGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12373 <Hsp_midline>||||||| | || ||||||||||| || || || || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12374 </Hsp>
|
jpayne@1
|
12375 </Hit_hsps>
|
jpayne@1
|
12376 </Hit>
|
jpayne@1
|
12377 </Iteration_hits>
|
jpayne@1
|
12378 <Iteration_stat>
|
jpayne@1
|
12379 <Statistics>
|
jpayne@1
|
12380 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12381 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12382 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12383 <Statistics_eff-space>68424696</Statistics_eff-space>
|
jpayne@1
|
12384 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12385 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12386 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12387 </Statistics>
|
jpayne@1
|
12388 </Iteration_stat>
|
jpayne@1
|
12389 </Iteration>
|
jpayne@1
|
12390 <Iteration>
|
jpayne@1
|
12391 <Iteration_iter-num>241</Iteration_iter-num>
|
jpayne@1
|
12392 <Iteration_query-ID>Query_241</Iteration_query-ID>
|
jpayne@1
|
12393 <Iteration_query-def>fliC_e,h_Anatumstr_AOZZ01000009_e__1497</Iteration_query-def>
|
jpayne@1
|
12394 <Iteration_query-len>1497</Iteration_query-len>
|
jpayne@1
|
12395 <Iteration_hits>
|
jpayne@1
|
12396 <Hit>
|
jpayne@1
|
12397 <Hit_num>1</Hit_num>
|
jpayne@1
|
12398 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12399 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12400 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12401 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12402 <Hit_hsps>
|
jpayne@1
|
12403 <Hsp>
|
jpayne@1
|
12404 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12405 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
12406 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
12407 <Hsp_evalue>3.03097e-138</Hsp_evalue>
|
jpayne@1
|
12408 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12409 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
12410 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12411 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
12412 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12413 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12414 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
12415 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
12416 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
12417 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
12418 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCACAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
12419 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
12420 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
12421 </Hsp>
|
jpayne@1
|
12422 <Hsp>
|
jpayne@1
|
12423 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12424 <Hsp_bit-score>195.019</Hsp_bit-score>
|
jpayne@1
|
12425 <Hsp_score>105</Hsp_score>
|
jpayne@1
|
12426 <Hsp_evalue>1.59039e-51</Hsp_evalue>
|
jpayne@1
|
12427 <Hsp_query-from>1240</Hsp_query-from>
|
jpayne@1
|
12428 <Hsp_query-to>1497</Hsp_query-to>
|
jpayne@1
|
12429 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
12430 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12431 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12432 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12433 <Hsp_identity>209</Hsp_identity>
|
jpayne@1
|
12434 <Hsp_positive>209</Hsp_positive>
|
jpayne@1
|
12435 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
12436 <Hsp_align-len>260</Hsp_align-len>
|
jpayne@1
|
12437 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAGGTTGATGC-GTTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACTTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12438 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12439 <Hsp_midline>||||| |||||| ||||||| | || || | | || || || ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| || || || |||||||||||||||||| | |||||||| || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12440 </Hsp>
|
jpayne@1
|
12441 </Hit_hsps>
|
jpayne@1
|
12442 </Hit>
|
jpayne@1
|
12443 </Iteration_hits>
|
jpayne@1
|
12444 <Iteration_stat>
|
jpayne@1
|
12445 <Statistics>
|
jpayne@1
|
12446 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12447 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12448 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12449 <Statistics_eff-space>80895384</Statistics_eff-space>
|
jpayne@1
|
12450 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12451 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12452 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12453 </Statistics>
|
jpayne@1
|
12454 </Iteration_stat>
|
jpayne@1
|
12455 </Iteration>
|
jpayne@1
|
12456 <Iteration>
|
jpayne@1
|
12457 <Iteration_iter-num>242</Iteration_iter-num>
|
jpayne@1
|
12458 <Iteration_query-ID>Query_242</Iteration_query-ID>
|
jpayne@1
|
12459 <Iteration_query-def>fliC_e,h_Anatumstr_APAA01000233_e__1497</Iteration_query-def>
|
jpayne@1
|
12460 <Iteration_query-len>1497</Iteration_query-len>
|
jpayne@1
|
12461 <Iteration_hits>
|
jpayne@1
|
12462 <Hit>
|
jpayne@1
|
12463 <Hit_num>1</Hit_num>
|
jpayne@1
|
12464 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12465 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12466 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12467 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12468 <Hit_hsps>
|
jpayne@1
|
12469 <Hsp>
|
jpayne@1
|
12470 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12471 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
12472 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
12473 <Hsp_evalue>3.03097e-138</Hsp_evalue>
|
jpayne@1
|
12474 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12475 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
12476 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12477 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
12478 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12479 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12480 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
12481 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
12482 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
12483 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
12484 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCACAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
12485 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
12486 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || ||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
12487 </Hsp>
|
jpayne@1
|
12488 <Hsp>
|
jpayne@1
|
12489 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12490 <Hsp_bit-score>195.019</Hsp_bit-score>
|
jpayne@1
|
12491 <Hsp_score>105</Hsp_score>
|
jpayne@1
|
12492 <Hsp_evalue>1.59039e-51</Hsp_evalue>
|
jpayne@1
|
12493 <Hsp_query-from>1240</Hsp_query-from>
|
jpayne@1
|
12494 <Hsp_query-to>1497</Hsp_query-to>
|
jpayne@1
|
12495 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
12496 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12497 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12498 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12499 <Hsp_identity>209</Hsp_identity>
|
jpayne@1
|
12500 <Hsp_positive>209</Hsp_positive>
|
jpayne@1
|
12501 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
12502 <Hsp_align-len>260</Hsp_align-len>
|
jpayne@1
|
12503 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAGGTTGATGC-GTTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAACAACTTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12504 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12505 <Hsp_midline>||||| |||||| ||||||| | || || | | || || || ||| |||||| ||||| || | || |||||||| | || || || |||||||| ||||| || |||| ||| || || || |||||||||||||||||| | |||||||| || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12506 </Hsp>
|
jpayne@1
|
12507 </Hit_hsps>
|
jpayne@1
|
12508 </Hit>
|
jpayne@1
|
12509 </Iteration_hits>
|
jpayne@1
|
12510 <Iteration_stat>
|
jpayne@1
|
12511 <Statistics>
|
jpayne@1
|
12512 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12513 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12514 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12515 <Statistics_eff-space>80895384</Statistics_eff-space>
|
jpayne@1
|
12516 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12517 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12518 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12519 </Statistics>
|
jpayne@1
|
12520 </Iteration_stat>
|
jpayne@1
|
12521 </Iteration>
|
jpayne@1
|
12522 <Iteration>
|
jpayne@1
|
12523 <Iteration_iter-num>243</Iteration_iter-num>
|
jpayne@1
|
12524 <Iteration_query-ID>Query_243</Iteration_query-ID>
|
jpayne@1
|
12525 <Iteration_query-def>fliC_y_Bareillystr_ALPN01000010_other.y__1509</Iteration_query-def>
|
jpayne@1
|
12526 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
12527 <Iteration_hits>
|
jpayne@1
|
12528 <Hit>
|
jpayne@1
|
12529 <Hit_num>1</Hit_num>
|
jpayne@1
|
12530 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12531 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12532 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12533 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12534 <Hit_hsps>
|
jpayne@1
|
12535 <Hsp>
|
jpayne@1
|
12536 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12537 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
12538 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
12539 <Hsp_evalue>6.61412e-135</Hsp_evalue>
|
jpayne@1
|
12540 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12541 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
12542 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12543 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
12544 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12545 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12546 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
12547 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
12548 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
12549 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
12550 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
12551 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
12552 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
12553 </Hsp>
|
jpayne@1
|
12554 <Hsp>
|
jpayne@1
|
12555 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12556 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
12557 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
12558 <Hsp_evalue>3.42176e-58</Hsp_evalue>
|
jpayne@1
|
12559 <Hsp_query-from>1252</Hsp_query-from>
|
jpayne@1
|
12560 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
12561 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
12562 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12563 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12564 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12565 <Hsp_identity>211</Hsp_identity>
|
jpayne@1
|
12566 <Hsp_positive>211</Hsp_positive>
|
jpayne@1
|
12567 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12568 <Hsp_align-len>258</Hsp_align-len>
|
jpayne@1
|
12569 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12570 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12571 <Hsp_midline>||||| |||||| ||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12572 </Hsp>
|
jpayne@1
|
12573 </Hit_hsps>
|
jpayne@1
|
12574 </Hit>
|
jpayne@1
|
12575 </Iteration_hits>
|
jpayne@1
|
12576 <Iteration_stat>
|
jpayne@1
|
12577 <Statistics>
|
jpayne@1
|
12578 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12579 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12580 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12581 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
12582 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12583 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12584 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12585 </Statistics>
|
jpayne@1
|
12586 </Iteration_stat>
|
jpayne@1
|
12587 </Iteration>
|
jpayne@1
|
12588 <Iteration>
|
jpayne@1
|
12589 <Iteration_iter-num>244</Iteration_iter-num>
|
jpayne@1
|
12590 <Iteration_query-ID>Query_244</Iteration_query-ID>
|
jpayne@1
|
12591 <Iteration_query-def>fliC_y_Bareillystr_AOZP01000027_other.y__1508</Iteration_query-def>
|
jpayne@1
|
12592 <Iteration_query-len>1508</Iteration_query-len>
|
jpayne@1
|
12593 <Iteration_hits>
|
jpayne@1
|
12594 <Hit>
|
jpayne@1
|
12595 <Hit_num>1</Hit_num>
|
jpayne@1
|
12596 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12597 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12598 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12599 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12600 <Hit_hsps>
|
jpayne@1
|
12601 <Hsp>
|
jpayne@1
|
12602 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12603 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
12604 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
12605 <Hsp_evalue>6.60969e-135</Hsp_evalue>
|
jpayne@1
|
12606 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12607 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
12608 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12609 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
12610 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12611 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12612 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
12613 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
12614 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
12615 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
12616 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
12617 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
12618 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
12619 </Hsp>
|
jpayne@1
|
12620 <Hsp>
|
jpayne@1
|
12621 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12622 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
12623 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
12624 <Hsp_evalue>3.41946e-58</Hsp_evalue>
|
jpayne@1
|
12625 <Hsp_query-from>1251</Hsp_query-from>
|
jpayne@1
|
12626 <Hsp_query-to>1508</Hsp_query-to>
|
jpayne@1
|
12627 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
12628 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12629 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12630 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12631 <Hsp_identity>211</Hsp_identity>
|
jpayne@1
|
12632 <Hsp_positive>211</Hsp_positive>
|
jpayne@1
|
12633 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12634 <Hsp_align-len>258</Hsp_align-len>
|
jpayne@1
|
12635 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12636 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12637 <Hsp_midline>||||| |||||| ||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12638 </Hsp>
|
jpayne@1
|
12639 </Hit_hsps>
|
jpayne@1
|
12640 </Hit>
|
jpayne@1
|
12641 </Iteration_hits>
|
jpayne@1
|
12642 <Iteration_stat>
|
jpayne@1
|
12643 <Statistics>
|
jpayne@1
|
12644 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12645 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12646 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12647 <Statistics_eff-space>81497040</Statistics_eff-space>
|
jpayne@1
|
12648 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12649 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12650 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12651 </Statistics>
|
jpayne@1
|
12652 </Iteration_stat>
|
jpayne@1
|
12653 </Iteration>
|
jpayne@1
|
12654 <Iteration>
|
jpayne@1
|
12655 <Iteration_iter-num>245</Iteration_iter-num>
|
jpayne@1
|
12656 <Iteration_query-ID>Query_245</Iteration_query-ID>
|
jpayne@1
|
12657 <Iteration_query-def>fliC_e,h_Braenderupstr_AOZM01000034_e__1497</Iteration_query-def>
|
jpayne@1
|
12658 <Iteration_query-len>1497</Iteration_query-len>
|
jpayne@1
|
12659 <Iteration_hits>
|
jpayne@1
|
12660 <Hit>
|
jpayne@1
|
12661 <Hit_num>1</Hit_num>
|
jpayne@1
|
12662 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12663 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12664 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12665 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12666 <Hit_hsps>
|
jpayne@1
|
12667 <Hsp>
|
jpayne@1
|
12668 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12669 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
12670 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
12671 <Hsp_evalue>6.51464e-140</Hsp_evalue>
|
jpayne@1
|
12672 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12673 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
12674 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12675 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
12676 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12677 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12678 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
12679 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
12680 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
12681 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
12682 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
12683 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
12684 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
12685 </Hsp>
|
jpayne@1
|
12686 </Hit_hsps>
|
jpayne@1
|
12687 </Hit>
|
jpayne@1
|
12688 </Iteration_hits>
|
jpayne@1
|
12689 <Iteration_stat>
|
jpayne@1
|
12690 <Statistics>
|
jpayne@1
|
12691 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12692 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12693 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12694 <Statistics_eff-space>80895384</Statistics_eff-space>
|
jpayne@1
|
12695 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12696 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12697 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12698 </Statistics>
|
jpayne@1
|
12699 </Iteration_stat>
|
jpayne@1
|
12700 </Iteration>
|
jpayne@1
|
12701 <Iteration>
|
jpayne@1
|
12702 <Iteration_iter-num>246</Iteration_iter-num>
|
jpayne@1
|
12703 <Iteration_query-ID>Query_246</Iteration_query-ID>
|
jpayne@1
|
12704 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYVH01000420_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
12705 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
12706 <Iteration_hits>
|
jpayne@1
|
12707 <Hit>
|
jpayne@1
|
12708 <Hit_num>1</Hit_num>
|
jpayne@1
|
12709 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12710 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12711 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12712 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12713 <Hit_hsps>
|
jpayne@1
|
12714 <Hsp>
|
jpayne@1
|
12715 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12716 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
12717 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
12718 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
12719 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12720 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
12721 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12722 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
12723 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12724 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12725 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
12726 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
12727 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12728 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
12729 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
12730 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
12731 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
12732 </Hsp>
|
jpayne@1
|
12733 <Hsp>
|
jpayne@1
|
12734 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12735 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
12736 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
12737 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
12738 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
12739 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
12740 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
12741 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12742 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12743 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12744 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
12745 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
12746 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12747 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
12748 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12749 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12750 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12751 </Hsp>
|
jpayne@1
|
12752 </Hit_hsps>
|
jpayne@1
|
12753 </Hit>
|
jpayne@1
|
12754 </Iteration_hits>
|
jpayne@1
|
12755 <Iteration_stat>
|
jpayne@1
|
12756 <Statistics>
|
jpayne@1
|
12757 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12758 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12759 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12760 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
12761 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12762 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12763 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12764 </Statistics>
|
jpayne@1
|
12765 </Iteration_stat>
|
jpayne@1
|
12766 </Iteration>
|
jpayne@1
|
12767 <Iteration>
|
jpayne@1
|
12768 <Iteration_iter-num>247</Iteration_iter-num>
|
jpayne@1
|
12769 <Iteration_query-ID>Query_247</Iteration_query-ID>
|
jpayne@1
|
12770 <Iteration_query-def>fliC_z4,z23_Cerrostr_AOZJ01000077_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
12771 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
12772 <Iteration_hits>
|
jpayne@1
|
12773 <Hit>
|
jpayne@1
|
12774 <Hit_num>1</Hit_num>
|
jpayne@1
|
12775 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12776 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12777 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12778 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12779 <Hit_hsps>
|
jpayne@1
|
12780 <Hsp>
|
jpayne@1
|
12781 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12782 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
12783 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
12784 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
12785 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12786 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
12787 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12788 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
12789 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12790 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12791 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
12792 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
12793 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12794 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
12795 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
12796 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
12797 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
12798 </Hsp>
|
jpayne@1
|
12799 <Hsp>
|
jpayne@1
|
12800 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12801 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
12802 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
12803 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
12804 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
12805 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
12806 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
12807 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12808 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12809 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12810 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
12811 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
12812 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12813 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
12814 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12815 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12816 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12817 </Hsp>
|
jpayne@1
|
12818 </Hit_hsps>
|
jpayne@1
|
12819 </Hit>
|
jpayne@1
|
12820 </Iteration_hits>
|
jpayne@1
|
12821 <Iteration_stat>
|
jpayne@1
|
12822 <Statistics>
|
jpayne@1
|
12823 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12824 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12825 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12826 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
12827 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12828 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12829 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12830 </Statistics>
|
jpayne@1
|
12831 </Iteration_stat>
|
jpayne@1
|
12832 </Iteration>
|
jpayne@1
|
12833 <Iteration>
|
jpayne@1
|
12834 <Iteration_iter-num>248</Iteration_iter-num>
|
jpayne@1
|
12835 <Iteration_query-ID>Query_248</Iteration_query-ID>
|
jpayne@1
|
12836 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYVG01000027_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
12837 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
12838 <Iteration_hits>
|
jpayne@1
|
12839 <Hit>
|
jpayne@1
|
12840 <Hit_num>1</Hit_num>
|
jpayne@1
|
12841 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12842 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12843 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12844 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12845 <Hit_hsps>
|
jpayne@1
|
12846 <Hsp>
|
jpayne@1
|
12847 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12848 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
12849 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
12850 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
12851 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12852 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
12853 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12854 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
12855 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12856 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12857 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
12858 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
12859 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12860 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
12861 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
12862 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
12863 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
12864 </Hsp>
|
jpayne@1
|
12865 <Hsp>
|
jpayne@1
|
12866 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12867 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
12868 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
12869 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
12870 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
12871 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
12872 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
12873 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12874 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12875 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12876 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
12877 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
12878 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12879 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
12880 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12881 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12882 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12883 </Hsp>
|
jpayne@1
|
12884 </Hit_hsps>
|
jpayne@1
|
12885 </Hit>
|
jpayne@1
|
12886 </Iteration_hits>
|
jpayne@1
|
12887 <Iteration_stat>
|
jpayne@1
|
12888 <Statistics>
|
jpayne@1
|
12889 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12890 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12891 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12892 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
12893 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12894 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12895 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12896 </Statistics>
|
jpayne@1
|
12897 </Iteration_stat>
|
jpayne@1
|
12898 </Iteration>
|
jpayne@1
|
12899 <Iteration>
|
jpayne@1
|
12900 <Iteration_iter-num>249</Iteration_iter-num>
|
jpayne@1
|
12901 <Iteration_query-ID>Query_249</Iteration_query-ID>
|
jpayne@1
|
12902 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYVF01000022_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
12903 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
12904 <Iteration_hits>
|
jpayne@1
|
12905 <Hit>
|
jpayne@1
|
12906 <Hit_num>1</Hit_num>
|
jpayne@1
|
12907 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12908 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12909 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12910 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12911 <Hit_hsps>
|
jpayne@1
|
12912 <Hsp>
|
jpayne@1
|
12913 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12914 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
12915 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
12916 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
12917 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12918 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
12919 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12920 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
12921 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12922 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12923 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
12924 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
12925 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12926 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
12927 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
12928 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
12929 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
12930 </Hsp>
|
jpayne@1
|
12931 <Hsp>
|
jpayne@1
|
12932 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12933 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
12934 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
12935 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
12936 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
12937 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
12938 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
12939 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
12940 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12941 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12942 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
12943 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
12944 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12945 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
12946 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
12947 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
12948 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
12949 </Hsp>
|
jpayne@1
|
12950 </Hit_hsps>
|
jpayne@1
|
12951 </Hit>
|
jpayne@1
|
12952 </Iteration_hits>
|
jpayne@1
|
12953 <Iteration_stat>
|
jpayne@1
|
12954 <Statistics>
|
jpayne@1
|
12955 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
12956 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
12957 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
12958 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
12959 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
12960 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
12961 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
12962 </Statistics>
|
jpayne@1
|
12963 </Iteration_stat>
|
jpayne@1
|
12964 </Iteration>
|
jpayne@1
|
12965 <Iteration>
|
jpayne@1
|
12966 <Iteration_iter-num>250</Iteration_iter-num>
|
jpayne@1
|
12967 <Iteration_query-ID>Query_250</Iteration_query-ID>
|
jpayne@1
|
12968 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYVE01000024_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
12969 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
12970 <Iteration_hits>
|
jpayne@1
|
12971 <Hit>
|
jpayne@1
|
12972 <Hit_num>1</Hit_num>
|
jpayne@1
|
12973 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
12974 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
12975 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
12976 <Hit_len>1962</Hit_len>
|
jpayne@1
|
12977 <Hit_hsps>
|
jpayne@1
|
12978 <Hsp>
|
jpayne@1
|
12979 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
12980 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
12981 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
12982 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
12983 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
12984 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
12985 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
12986 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
12987 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
12988 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
12989 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
12990 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
12991 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
12992 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
12993 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
12994 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
12995 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
12996 </Hsp>
|
jpayne@1
|
12997 <Hsp>
|
jpayne@1
|
12998 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
12999 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13000 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13001 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13002 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13003 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13004 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13005 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13006 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13007 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13008 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13009 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13010 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13011 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13012 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13013 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13014 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13015 </Hsp>
|
jpayne@1
|
13016 </Hit_hsps>
|
jpayne@1
|
13017 </Hit>
|
jpayne@1
|
13018 </Iteration_hits>
|
jpayne@1
|
13019 <Iteration_stat>
|
jpayne@1
|
13020 <Statistics>
|
jpayne@1
|
13021 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13022 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13023 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13024 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13025 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13026 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13027 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13028 </Statistics>
|
jpayne@1
|
13029 </Iteration_stat>
|
jpayne@1
|
13030 </Iteration>
|
jpayne@1
|
13031 <Iteration>
|
jpayne@1
|
13032 <Iteration_iter-num>251</Iteration_iter-num>
|
jpayne@1
|
13033 <Iteration_query-ID>Query_251</Iteration_query-ID>
|
jpayne@1
|
13034 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYVD01000023_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13035 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13036 <Iteration_hits>
|
jpayne@1
|
13037 <Hit>
|
jpayne@1
|
13038 <Hit_num>1</Hit_num>
|
jpayne@1
|
13039 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13040 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13041 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13042 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13043 <Hit_hsps>
|
jpayne@1
|
13044 <Hsp>
|
jpayne@1
|
13045 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13046 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13047 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13048 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13049 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13050 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13051 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13052 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13053 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13054 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13055 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13056 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13057 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13058 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13059 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13060 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13061 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13062 </Hsp>
|
jpayne@1
|
13063 <Hsp>
|
jpayne@1
|
13064 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13065 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13066 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13067 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13068 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13069 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13070 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13071 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13072 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13073 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13074 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13075 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13076 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13077 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13078 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13079 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13080 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13081 </Hsp>
|
jpayne@1
|
13082 </Hit_hsps>
|
jpayne@1
|
13083 </Hit>
|
jpayne@1
|
13084 </Iteration_hits>
|
jpayne@1
|
13085 <Iteration_stat>
|
jpayne@1
|
13086 <Statistics>
|
jpayne@1
|
13087 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13088 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13089 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13090 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13091 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13092 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13093 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13094 </Statistics>
|
jpayne@1
|
13095 </Iteration_stat>
|
jpayne@1
|
13096 </Iteration>
|
jpayne@1
|
13097 <Iteration>
|
jpayne@1
|
13098 <Iteration_iter-num>252</Iteration_iter-num>
|
jpayne@1
|
13099 <Iteration_query-ID>Query_252</Iteration_query-ID>
|
jpayne@1
|
13100 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYVB01000023_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13101 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13102 <Iteration_hits>
|
jpayne@1
|
13103 <Hit>
|
jpayne@1
|
13104 <Hit_num>1</Hit_num>
|
jpayne@1
|
13105 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13106 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13107 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13108 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13109 <Hit_hsps>
|
jpayne@1
|
13110 <Hsp>
|
jpayne@1
|
13111 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13112 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13113 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13114 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13115 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13116 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13117 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13118 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13119 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13120 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13121 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13122 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13123 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13124 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13125 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13126 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13127 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13128 </Hsp>
|
jpayne@1
|
13129 <Hsp>
|
jpayne@1
|
13130 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13131 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13132 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13133 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13134 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13135 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13136 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13137 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13138 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13139 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13140 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13141 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13142 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13143 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13144 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13145 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13146 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13147 </Hsp>
|
jpayne@1
|
13148 </Hit_hsps>
|
jpayne@1
|
13149 </Hit>
|
jpayne@1
|
13150 </Iteration_hits>
|
jpayne@1
|
13151 <Iteration_stat>
|
jpayne@1
|
13152 <Statistics>
|
jpayne@1
|
13153 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13154 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13155 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13156 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13157 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13158 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13159 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13160 </Statistics>
|
jpayne@1
|
13161 </Iteration_stat>
|
jpayne@1
|
13162 </Iteration>
|
jpayne@1
|
13163 <Iteration>
|
jpayne@1
|
13164 <Iteration_iter-num>253</Iteration_iter-num>
|
jpayne@1
|
13165 <Iteration_query-ID>Query_253</Iteration_query-ID>
|
jpayne@1
|
13166 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYVA01000024_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13167 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13168 <Iteration_hits>
|
jpayne@1
|
13169 <Hit>
|
jpayne@1
|
13170 <Hit_num>1</Hit_num>
|
jpayne@1
|
13171 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13172 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13173 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13174 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13175 <Hit_hsps>
|
jpayne@1
|
13176 <Hsp>
|
jpayne@1
|
13177 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13178 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13179 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13180 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13181 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13182 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13183 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13184 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13185 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13186 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13187 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13188 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13189 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13190 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13191 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13192 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13193 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13194 </Hsp>
|
jpayne@1
|
13195 <Hsp>
|
jpayne@1
|
13196 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13197 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13198 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13199 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13200 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13201 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13202 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13203 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13204 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13205 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13206 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13207 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13208 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13209 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13210 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13211 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13212 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13213 </Hsp>
|
jpayne@1
|
13214 </Hit_hsps>
|
jpayne@1
|
13215 </Hit>
|
jpayne@1
|
13216 </Iteration_hits>
|
jpayne@1
|
13217 <Iteration_stat>
|
jpayne@1
|
13218 <Statistics>
|
jpayne@1
|
13219 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13220 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13221 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13222 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13223 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13224 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13225 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13226 </Statistics>
|
jpayne@1
|
13227 </Iteration_stat>
|
jpayne@1
|
13228 </Iteration>
|
jpayne@1
|
13229 <Iteration>
|
jpayne@1
|
13230 <Iteration_iter-num>254</Iteration_iter-num>
|
jpayne@1
|
13231 <Iteration_query-ID>Query_254</Iteration_query-ID>
|
jpayne@1
|
13232 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYUZ01000022_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13233 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13234 <Iteration_hits>
|
jpayne@1
|
13235 <Hit>
|
jpayne@1
|
13236 <Hit_num>1</Hit_num>
|
jpayne@1
|
13237 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13238 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13239 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13240 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13241 <Hit_hsps>
|
jpayne@1
|
13242 <Hsp>
|
jpayne@1
|
13243 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13244 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13245 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13246 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13247 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13248 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13249 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13250 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13251 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13252 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13253 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13254 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13255 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13256 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13257 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13258 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13259 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13260 </Hsp>
|
jpayne@1
|
13261 <Hsp>
|
jpayne@1
|
13262 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13263 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13264 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13265 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13266 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13267 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13268 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13269 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13270 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13271 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13272 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13273 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13274 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13275 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13276 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13277 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13278 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13279 </Hsp>
|
jpayne@1
|
13280 </Hit_hsps>
|
jpayne@1
|
13281 </Hit>
|
jpayne@1
|
13282 </Iteration_hits>
|
jpayne@1
|
13283 <Iteration_stat>
|
jpayne@1
|
13284 <Statistics>
|
jpayne@1
|
13285 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13286 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13287 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13288 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13289 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13290 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13291 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13292 </Statistics>
|
jpayne@1
|
13293 </Iteration_stat>
|
jpayne@1
|
13294 </Iteration>
|
jpayne@1
|
13295 <Iteration>
|
jpayne@1
|
13296 <Iteration_iter-num>255</Iteration_iter-num>
|
jpayne@1
|
13297 <Iteration_query-ID>Query_255</Iteration_query-ID>
|
jpayne@1
|
13298 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYUY01000025_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13299 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13300 <Iteration_hits>
|
jpayne@1
|
13301 <Hit>
|
jpayne@1
|
13302 <Hit_num>1</Hit_num>
|
jpayne@1
|
13303 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13304 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13305 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13306 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13307 <Hit_hsps>
|
jpayne@1
|
13308 <Hsp>
|
jpayne@1
|
13309 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13310 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13311 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13312 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13313 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13314 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13315 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13316 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13317 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13318 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13319 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13320 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13321 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13322 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13323 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13324 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13325 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13326 </Hsp>
|
jpayne@1
|
13327 <Hsp>
|
jpayne@1
|
13328 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13329 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13330 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13331 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13332 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13333 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13334 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13335 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13336 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13337 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13338 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13339 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13340 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13341 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13342 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13343 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13344 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13345 </Hsp>
|
jpayne@1
|
13346 </Hit_hsps>
|
jpayne@1
|
13347 </Hit>
|
jpayne@1
|
13348 </Iteration_hits>
|
jpayne@1
|
13349 <Iteration_stat>
|
jpayne@1
|
13350 <Statistics>
|
jpayne@1
|
13351 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13352 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13353 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13354 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13355 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13356 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13357 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13358 </Statistics>
|
jpayne@1
|
13359 </Iteration_stat>
|
jpayne@1
|
13360 </Iteration>
|
jpayne@1
|
13361 <Iteration>
|
jpayne@1
|
13362 <Iteration_iter-num>256</Iteration_iter-num>
|
jpayne@1
|
13363 <Iteration_query-ID>Query_256</Iteration_query-ID>
|
jpayne@1
|
13364 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYUX01000023_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13365 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13366 <Iteration_hits>
|
jpayne@1
|
13367 <Hit>
|
jpayne@1
|
13368 <Hit_num>1</Hit_num>
|
jpayne@1
|
13369 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13370 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13371 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13372 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13373 <Hit_hsps>
|
jpayne@1
|
13374 <Hsp>
|
jpayne@1
|
13375 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13376 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13377 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13378 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13379 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13380 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13381 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13382 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13383 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13384 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13385 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13386 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13387 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13388 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13389 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13390 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13391 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13392 </Hsp>
|
jpayne@1
|
13393 <Hsp>
|
jpayne@1
|
13394 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13395 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13396 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13397 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13398 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13399 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13400 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13401 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13402 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13403 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13404 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13405 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13406 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13407 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13408 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13409 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13410 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13411 </Hsp>
|
jpayne@1
|
13412 </Hit_hsps>
|
jpayne@1
|
13413 </Hit>
|
jpayne@1
|
13414 </Iteration_hits>
|
jpayne@1
|
13415 <Iteration_stat>
|
jpayne@1
|
13416 <Statistics>
|
jpayne@1
|
13417 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13418 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13419 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13420 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13421 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13422 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13423 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13424 </Statistics>
|
jpayne@1
|
13425 </Iteration_stat>
|
jpayne@1
|
13426 </Iteration>
|
jpayne@1
|
13427 <Iteration>
|
jpayne@1
|
13428 <Iteration_iter-num>257</Iteration_iter-num>
|
jpayne@1
|
13429 <Iteration_query-ID>Query_257</Iteration_query-ID>
|
jpayne@1
|
13430 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYUW01000021_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13431 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13432 <Iteration_hits>
|
jpayne@1
|
13433 <Hit>
|
jpayne@1
|
13434 <Hit_num>1</Hit_num>
|
jpayne@1
|
13435 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13436 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13437 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13438 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13439 <Hit_hsps>
|
jpayne@1
|
13440 <Hsp>
|
jpayne@1
|
13441 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13442 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13443 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13444 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13445 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13446 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13447 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13448 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13449 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13450 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13451 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13452 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13453 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13454 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13455 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13456 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13457 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13458 </Hsp>
|
jpayne@1
|
13459 <Hsp>
|
jpayne@1
|
13460 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13461 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13462 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13463 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13464 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13465 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13466 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13467 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13468 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13469 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13470 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13471 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13472 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13473 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13474 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13475 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13476 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13477 </Hsp>
|
jpayne@1
|
13478 </Hit_hsps>
|
jpayne@1
|
13479 </Hit>
|
jpayne@1
|
13480 </Iteration_hits>
|
jpayne@1
|
13481 <Iteration_stat>
|
jpayne@1
|
13482 <Statistics>
|
jpayne@1
|
13483 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13484 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13485 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13486 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13487 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13488 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13489 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13490 </Statistics>
|
jpayne@1
|
13491 </Iteration_stat>
|
jpayne@1
|
13492 </Iteration>
|
jpayne@1
|
13493 <Iteration>
|
jpayne@1
|
13494 <Iteration_iter-num>258</Iteration_iter-num>
|
jpayne@1
|
13495 <Iteration_query-ID>Query_258</Iteration_query-ID>
|
jpayne@1
|
13496 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYUV01000029_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13497 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13498 <Iteration_hits>
|
jpayne@1
|
13499 <Hit>
|
jpayne@1
|
13500 <Hit_num>1</Hit_num>
|
jpayne@1
|
13501 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13502 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13503 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13504 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13505 <Hit_hsps>
|
jpayne@1
|
13506 <Hsp>
|
jpayne@1
|
13507 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13508 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13509 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13510 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13511 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13512 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13513 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13514 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13515 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13516 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13517 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13518 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13519 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13520 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13521 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13522 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13523 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13524 </Hsp>
|
jpayne@1
|
13525 <Hsp>
|
jpayne@1
|
13526 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13527 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13528 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13529 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13530 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13531 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13532 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13533 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13534 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13535 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13536 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13537 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13538 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13539 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13540 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13541 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13542 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13543 </Hsp>
|
jpayne@1
|
13544 </Hit_hsps>
|
jpayne@1
|
13545 </Hit>
|
jpayne@1
|
13546 </Iteration_hits>
|
jpayne@1
|
13547 <Iteration_stat>
|
jpayne@1
|
13548 <Statistics>
|
jpayne@1
|
13549 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13550 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13551 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13552 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13553 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13554 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13555 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13556 </Statistics>
|
jpayne@1
|
13557 </Iteration_stat>
|
jpayne@1
|
13558 </Iteration>
|
jpayne@1
|
13559 <Iteration>
|
jpayne@1
|
13560 <Iteration_iter-num>259</Iteration_iter-num>
|
jpayne@1
|
13561 <Iteration_query-ID>Query_259</Iteration_query-ID>
|
jpayne@1
|
13562 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYUU01000023_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13563 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13564 <Iteration_hits>
|
jpayne@1
|
13565 <Hit>
|
jpayne@1
|
13566 <Hit_num>1</Hit_num>
|
jpayne@1
|
13567 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13568 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13569 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13570 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13571 <Hit_hsps>
|
jpayne@1
|
13572 <Hsp>
|
jpayne@1
|
13573 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13574 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13575 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13576 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13577 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13578 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13579 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13580 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13581 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13582 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13583 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13584 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13585 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13586 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13587 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13588 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13589 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13590 </Hsp>
|
jpayne@1
|
13591 <Hsp>
|
jpayne@1
|
13592 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13593 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13594 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13595 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13596 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13597 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13598 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13599 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13600 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13601 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13602 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13603 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13604 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13605 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13606 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13607 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13608 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13609 </Hsp>
|
jpayne@1
|
13610 </Hit_hsps>
|
jpayne@1
|
13611 </Hit>
|
jpayne@1
|
13612 </Iteration_hits>
|
jpayne@1
|
13613 <Iteration_stat>
|
jpayne@1
|
13614 <Statistics>
|
jpayne@1
|
13615 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13616 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13617 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13618 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13619 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13620 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13621 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13622 </Statistics>
|
jpayne@1
|
13623 </Iteration_stat>
|
jpayne@1
|
13624 </Iteration>
|
jpayne@1
|
13625 <Iteration>
|
jpayne@1
|
13626 <Iteration_iter-num>260</Iteration_iter-num>
|
jpayne@1
|
13627 <Iteration_query-ID>Query_260</Iteration_query-ID>
|
jpayne@1
|
13628 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYUT01000021_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13629 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13630 <Iteration_hits>
|
jpayne@1
|
13631 <Hit>
|
jpayne@1
|
13632 <Hit_num>1</Hit_num>
|
jpayne@1
|
13633 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13634 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13635 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13636 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13637 <Hit_hsps>
|
jpayne@1
|
13638 <Hsp>
|
jpayne@1
|
13639 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13640 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13641 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13642 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13643 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13644 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13645 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13646 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13647 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13648 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13649 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13650 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13651 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13652 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13653 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13654 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13655 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13656 </Hsp>
|
jpayne@1
|
13657 <Hsp>
|
jpayne@1
|
13658 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13659 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13660 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13661 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13662 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13663 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13664 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13665 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13666 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13667 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13668 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13669 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13670 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13671 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13672 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13673 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13674 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13675 </Hsp>
|
jpayne@1
|
13676 </Hit_hsps>
|
jpayne@1
|
13677 </Hit>
|
jpayne@1
|
13678 </Iteration_hits>
|
jpayne@1
|
13679 <Iteration_stat>
|
jpayne@1
|
13680 <Statistics>
|
jpayne@1
|
13681 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13682 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13683 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13684 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13685 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13686 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13687 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13688 </Statistics>
|
jpayne@1
|
13689 </Iteration_stat>
|
jpayne@1
|
13690 </Iteration>
|
jpayne@1
|
13691 <Iteration>
|
jpayne@1
|
13692 <Iteration_iter-num>261</Iteration_iter-num>
|
jpayne@1
|
13693 <Iteration_query-ID>Query_261</Iteration_query-ID>
|
jpayne@1
|
13694 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYUS01000023_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13695 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13696 <Iteration_hits>
|
jpayne@1
|
13697 <Hit>
|
jpayne@1
|
13698 <Hit_num>1</Hit_num>
|
jpayne@1
|
13699 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13700 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13701 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13702 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13703 <Hit_hsps>
|
jpayne@1
|
13704 <Hsp>
|
jpayne@1
|
13705 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13706 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13707 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13708 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13709 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13710 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13711 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13712 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13713 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13714 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13715 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13716 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13717 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13718 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13719 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13720 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13721 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13722 </Hsp>
|
jpayne@1
|
13723 <Hsp>
|
jpayne@1
|
13724 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13725 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13726 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13727 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13728 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13729 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13730 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13731 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13732 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13733 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13734 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13735 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13736 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13737 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13738 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13739 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13740 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13741 </Hsp>
|
jpayne@1
|
13742 </Hit_hsps>
|
jpayne@1
|
13743 </Hit>
|
jpayne@1
|
13744 </Iteration_hits>
|
jpayne@1
|
13745 <Iteration_stat>
|
jpayne@1
|
13746 <Statistics>
|
jpayne@1
|
13747 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13748 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13749 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13750 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13751 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13752 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13753 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13754 </Statistics>
|
jpayne@1
|
13755 </Iteration_stat>
|
jpayne@1
|
13756 </Iteration>
|
jpayne@1
|
13757 <Iteration>
|
jpayne@1
|
13758 <Iteration_iter-num>262</Iteration_iter-num>
|
jpayne@1
|
13759 <Iteration_query-ID>Query_262</Iteration_query-ID>
|
jpayne@1
|
13760 <Iteration_query-def>fliC_z4,z23_Cerrostr_AYUR01000024_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
13761 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
13762 <Iteration_hits>
|
jpayne@1
|
13763 <Hit>
|
jpayne@1
|
13764 <Hit_num>1</Hit_num>
|
jpayne@1
|
13765 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13766 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13767 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13768 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13769 <Hit_hsps>
|
jpayne@1
|
13770 <Hsp>
|
jpayne@1
|
13771 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13772 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
13773 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
13774 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
13775 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13776 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
13777 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13778 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
13779 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13780 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13781 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
13782 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
13783 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13784 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
13785 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
13786 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
13787 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
13788 </Hsp>
|
jpayne@1
|
13789 <Hsp>
|
jpayne@1
|
13790 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
13791 <Hsp_bit-score>200.558</Hsp_bit-score>
|
jpayne@1
|
13792 <Hsp_score>108</Hsp_score>
|
jpayne@1
|
13793 <Hsp_evalue>2.86362e-53</Hsp_evalue>
|
jpayne@1
|
13794 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
13795 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
13796 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
13797 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13798 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13799 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13800 <Hsp_identity>160</Hsp_identity>
|
jpayne@1
|
13801 <Hsp_positive>160</Hsp_positive>
|
jpayne@1
|
13802 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13803 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
13804 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13805 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13806 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13807 </Hsp>
|
jpayne@1
|
13808 </Hit_hsps>
|
jpayne@1
|
13809 </Hit>
|
jpayne@1
|
13810 </Iteration_hits>
|
jpayne@1
|
13811 <Iteration_stat>
|
jpayne@1
|
13812 <Statistics>
|
jpayne@1
|
13813 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13814 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13815 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13816 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
13817 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13818 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13819 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13820 </Statistics>
|
jpayne@1
|
13821 </Iteration_stat>
|
jpayne@1
|
13822 </Iteration>
|
jpayne@1
|
13823 <Iteration>
|
jpayne@1
|
13824 <Iteration_iter-num>263</Iteration_iter-num>
|
jpayne@1
|
13825 <Iteration_query-ID>Query_263</Iteration_query-ID>
|
jpayne@1
|
13826 <Iteration_query-def>fliC_e,h_Chesterstr_AOZI01000027_e__1497</Iteration_query-def>
|
jpayne@1
|
13827 <Iteration_query-len>1497</Iteration_query-len>
|
jpayne@1
|
13828 <Iteration_hits>
|
jpayne@1
|
13829 <Hit>
|
jpayne@1
|
13830 <Hit_num>1</Hit_num>
|
jpayne@1
|
13831 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13832 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13833 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13834 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13835 <Hit_hsps>
|
jpayne@1
|
13836 <Hsp>
|
jpayne@1
|
13837 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13838 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
13839 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
13840 <Hsp_evalue>3.03097e-138</Hsp_evalue>
|
jpayne@1
|
13841 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13842 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
13843 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13844 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
13845 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13846 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13847 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
13848 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
13849 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
13850 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
13851 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
13852 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
13853 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
13854 </Hsp>
|
jpayne@1
|
13855 </Hit_hsps>
|
jpayne@1
|
13856 </Hit>
|
jpayne@1
|
13857 </Iteration_hits>
|
jpayne@1
|
13858 <Iteration_stat>
|
jpayne@1
|
13859 <Statistics>
|
jpayne@1
|
13860 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13861 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13862 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13863 <Statistics_eff-space>80895384</Statistics_eff-space>
|
jpayne@1
|
13864 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13865 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13866 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13867 </Statistics>
|
jpayne@1
|
13868 </Iteration_stat>
|
jpayne@1
|
13869 </Iteration>
|
jpayne@1
|
13870 <Iteration>
|
jpayne@1
|
13871 <Iteration_iter-num>264</Iteration_iter-num>
|
jpayne@1
|
13872 <Iteration_query-ID>Query_264</Iteration_query-ID>
|
jpayne@1
|
13873 <Iteration_query-def>fliC_f,g_Derbystr_AOZH01000145_g,m__1506</Iteration_query-def>
|
jpayne@1
|
13874 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
13875 <Iteration_hits>
|
jpayne@1
|
13876 <Hit>
|
jpayne@1
|
13877 <Hit_num>1</Hit_num>
|
jpayne@1
|
13878 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13879 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13880 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13881 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13882 <Hit_hsps>
|
jpayne@1
|
13883 <Hsp>
|
jpayne@1
|
13884 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13885 <Hsp_bit-score>2549.5</Hsp_bit-score>
|
jpayne@1
|
13886 <Hsp_score>1380</Hsp_score>
|
jpayne@1
|
13887 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
13888 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13889 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
13890 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13891 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13892 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13893 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13894 <Hsp_identity>1464</Hsp_identity>
|
jpayne@1
|
13895 <Hsp_positive>1464</Hsp_positive>
|
jpayne@1
|
13896 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13897 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
13898 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGTTTCACGTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAGGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAGTCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGAATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGACCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCAGTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAAGGCGAAAGTAAAATTACAGTAAACGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGGTCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13899 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13900 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13901 </Hsp>
|
jpayne@1
|
13902 </Hit_hsps>
|
jpayne@1
|
13903 </Hit>
|
jpayne@1
|
13904 </Iteration_hits>
|
jpayne@1
|
13905 <Iteration_stat>
|
jpayne@1
|
13906 <Statistics>
|
jpayne@1
|
13907 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13908 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13909 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13910 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
13911 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13912 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13913 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13914 </Statistics>
|
jpayne@1
|
13915 </Iteration_stat>
|
jpayne@1
|
13916 </Iteration>
|
jpayne@1
|
13917 <Iteration>
|
jpayne@1
|
13918 <Iteration_iter-num>265</Iteration_iter-num>
|
jpayne@1
|
13919 <Iteration_query-ID>Query_265</Iteration_query-ID>
|
jpayne@1
|
13920 <Iteration_query-def>fliC_g,p_Dublinstr_ATFR01000073_g,m__1506</Iteration_query-def>
|
jpayne@1
|
13921 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
13922 <Iteration_hits>
|
jpayne@1
|
13923 <Hit>
|
jpayne@1
|
13924 <Hit_num>1</Hit_num>
|
jpayne@1
|
13925 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13926 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13927 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13928 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13929 <Hit_hsps>
|
jpayne@1
|
13930 <Hsp>
|
jpayne@1
|
13931 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13932 <Hsp_bit-score>2582.74</Hsp_bit-score>
|
jpayne@1
|
13933 <Hsp_score>1398</Hsp_score>
|
jpayne@1
|
13934 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
13935 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13936 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
13937 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13938 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13939 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13940 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13941 <Hsp_identity>1470</Hsp_identity>
|
jpayne@1
|
13942 <Hsp_positive>1470</Hsp_positive>
|
jpayne@1
|
13943 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13944 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
13945 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCATTGGCGCGGCGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13946 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13947 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| || ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13948 </Hsp>
|
jpayne@1
|
13949 </Hit_hsps>
|
jpayne@1
|
13950 </Hit>
|
jpayne@1
|
13951 </Iteration_hits>
|
jpayne@1
|
13952 <Iteration_stat>
|
jpayne@1
|
13953 <Statistics>
|
jpayne@1
|
13954 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
13955 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
13956 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
13957 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
13958 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
13959 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
13960 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
13961 </Statistics>
|
jpayne@1
|
13962 </Iteration_stat>
|
jpayne@1
|
13963 </Iteration>
|
jpayne@1
|
13964 <Iteration>
|
jpayne@1
|
13965 <Iteration_iter-num>266</Iteration_iter-num>
|
jpayne@1
|
13966 <Iteration_query-ID>Query_266</Iteration_query-ID>
|
jpayne@1
|
13967 <Iteration_query-def>fliC_g,p_Dublinstr_AHUK01000006_g,m__1506</Iteration_query-def>
|
jpayne@1
|
13968 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
13969 <Iteration_hits>
|
jpayne@1
|
13970 <Hit>
|
jpayne@1
|
13971 <Hit_num>1</Hit_num>
|
jpayne@1
|
13972 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
13973 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
13974 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
13975 <Hit_len>1962</Hit_len>
|
jpayne@1
|
13976 <Hit_hsps>
|
jpayne@1
|
13977 <Hsp>
|
jpayne@1
|
13978 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
13979 <Hsp_bit-score>2582.74</Hsp_bit-score>
|
jpayne@1
|
13980 <Hsp_score>1398</Hsp_score>
|
jpayne@1
|
13981 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
13982 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
13983 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
13984 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
13985 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
13986 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
13987 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
13988 <Hsp_identity>1470</Hsp_identity>
|
jpayne@1
|
13989 <Hsp_positive>1470</Hsp_positive>
|
jpayne@1
|
13990 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
13991 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
13992 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCATTGGCGCGGCGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
13993 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
13994 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| || ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
13995 </Hsp>
|
jpayne@1
|
13996 </Hit_hsps>
|
jpayne@1
|
13997 </Hit>
|
jpayne@1
|
13998 </Iteration_hits>
|
jpayne@1
|
13999 <Iteration_stat>
|
jpayne@1
|
14000 <Statistics>
|
jpayne@1
|
14001 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14002 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14003 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14004 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14005 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14006 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14007 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14008 </Statistics>
|
jpayne@1
|
14009 </Iteration_stat>
|
jpayne@1
|
14010 </Iteration>
|
jpayne@1
|
14011 <Iteration>
|
jpayne@1
|
14012 <Iteration_iter-num>267</Iteration_iter-num>
|
jpayne@1
|
14013 <Iteration_query-ID>Query_267</Iteration_query-ID>
|
jpayne@1
|
14014 <Iteration_query-def>fliC_g,p_Dublinstr_AEUK01000013_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14015 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14016 <Iteration_hits>
|
jpayne@1
|
14017 <Hit>
|
jpayne@1
|
14018 <Hit_num>1</Hit_num>
|
jpayne@1
|
14019 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14020 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14021 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14022 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14023 <Hit_hsps>
|
jpayne@1
|
14024 <Hsp>
|
jpayne@1
|
14025 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14026 <Hsp_bit-score>2582.74</Hsp_bit-score>
|
jpayne@1
|
14027 <Hsp_score>1398</Hsp_score>
|
jpayne@1
|
14028 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14029 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14030 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14031 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14032 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14033 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14034 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14035 <Hsp_identity>1470</Hsp_identity>
|
jpayne@1
|
14036 <Hsp_positive>1470</Hsp_positive>
|
jpayne@1
|
14037 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14038 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14039 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCATTGGCGCGGCGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14040 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14041 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| || ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14042 </Hsp>
|
jpayne@1
|
14043 </Hit_hsps>
|
jpayne@1
|
14044 </Hit>
|
jpayne@1
|
14045 </Iteration_hits>
|
jpayne@1
|
14046 <Iteration_stat>
|
jpayne@1
|
14047 <Statistics>
|
jpayne@1
|
14048 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14049 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14050 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14051 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14052 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14053 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14054 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14055 </Statistics>
|
jpayne@1
|
14056 </Iteration_stat>
|
jpayne@1
|
14057 </Iteration>
|
jpayne@1
|
14058 <Iteration>
|
jpayne@1
|
14059 <Iteration_iter-num>268</Iteration_iter-num>
|
jpayne@1
|
14060 <Iteration_query-ID>Query_268</Iteration_query-ID>
|
jpayne@1
|
14061 <Iteration_query-def>fliC_g,p_Dublinstr_AHUJ01000052_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14062 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14063 <Iteration_hits>
|
jpayne@1
|
14064 <Hit>
|
jpayne@1
|
14065 <Hit_num>1</Hit_num>
|
jpayne@1
|
14066 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14067 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14068 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14069 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14070 <Hit_hsps>
|
jpayne@1
|
14071 <Hsp>
|
jpayne@1
|
14072 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14073 <Hsp_bit-score>2582.74</Hsp_bit-score>
|
jpayne@1
|
14074 <Hsp_score>1398</Hsp_score>
|
jpayne@1
|
14075 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14076 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14077 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14078 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14079 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14080 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14081 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14082 <Hsp_identity>1470</Hsp_identity>
|
jpayne@1
|
14083 <Hsp_positive>1470</Hsp_positive>
|
jpayne@1
|
14084 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14085 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14086 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCATTGGCGCGGCGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14087 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14088 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| || ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14089 </Hsp>
|
jpayne@1
|
14090 </Hit_hsps>
|
jpayne@1
|
14091 </Hit>
|
jpayne@1
|
14092 </Iteration_hits>
|
jpayne@1
|
14093 <Iteration_stat>
|
jpayne@1
|
14094 <Statistics>
|
jpayne@1
|
14095 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14096 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14097 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14098 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14099 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14100 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14101 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14102 </Statistics>
|
jpayne@1
|
14103 </Iteration_stat>
|
jpayne@1
|
14104 </Iteration>
|
jpayne@1
|
14105 <Iteration>
|
jpayne@1
|
14106 <Iteration_iter-num>269</Iteration_iter-num>
|
jpayne@1
|
14107 <Iteration_query-ID>Query_269</Iteration_query-ID>
|
jpayne@1
|
14108 <Iteration_query-def>fliC_g,p_Dublinstr_APMR01000022_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14109 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14110 <Iteration_hits>
|
jpayne@1
|
14111 <Hit>
|
jpayne@1
|
14112 <Hit_num>1</Hit_num>
|
jpayne@1
|
14113 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14114 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14115 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14116 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14117 <Hit_hsps>
|
jpayne@1
|
14118 <Hsp>
|
jpayne@1
|
14119 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14120 <Hsp_bit-score>2582.74</Hsp_bit-score>
|
jpayne@1
|
14121 <Hsp_score>1398</Hsp_score>
|
jpayne@1
|
14122 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14123 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14124 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14125 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14126 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14127 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14128 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14129 <Hsp_identity>1470</Hsp_identity>
|
jpayne@1
|
14130 <Hsp_positive>1470</Hsp_positive>
|
jpayne@1
|
14131 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14132 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14133 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGTAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCATTGGCGCGGCGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14134 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14135 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | |||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| || ||| ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14136 </Hsp>
|
jpayne@1
|
14137 </Hit_hsps>
|
jpayne@1
|
14138 </Hit>
|
jpayne@1
|
14139 </Iteration_hits>
|
jpayne@1
|
14140 <Iteration_stat>
|
jpayne@1
|
14141 <Statistics>
|
jpayne@1
|
14142 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14143 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14144 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14145 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14146 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14147 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14148 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14149 </Statistics>
|
jpayne@1
|
14150 </Iteration_stat>
|
jpayne@1
|
14151 </Iteration>
|
jpayne@1
|
14152 <Iteration>
|
jpayne@1
|
14153 <Iteration_iter-num>270</Iteration_iter-num>
|
jpayne@1
|
14154 <Iteration_query-ID>Query_270</Iteration_query-ID>
|
jpayne@1
|
14155 <Iteration_query-def>fliC_g,m_Enteritidisstr_AKFY01000033_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14156 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14157 <Iteration_hits>
|
jpayne@1
|
14158 <Hit>
|
jpayne@1
|
14159 <Hit_num>1</Hit_num>
|
jpayne@1
|
14160 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14161 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14162 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14163 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14164 <Hit_hsps>
|
jpayne@1
|
14165 <Hsp>
|
jpayne@1
|
14166 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14167 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14168 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14169 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14170 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14171 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14172 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14173 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14174 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14175 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14176 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14177 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14178 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14179 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14180 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14181 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14182 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14183 </Hsp>
|
jpayne@1
|
14184 </Hit_hsps>
|
jpayne@1
|
14185 </Hit>
|
jpayne@1
|
14186 </Iteration_hits>
|
jpayne@1
|
14187 <Iteration_stat>
|
jpayne@1
|
14188 <Statistics>
|
jpayne@1
|
14189 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14190 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14191 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14192 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14193 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14194 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14195 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14196 </Statistics>
|
jpayne@1
|
14197 </Iteration_stat>
|
jpayne@1
|
14198 </Iteration>
|
jpayne@1
|
14199 <Iteration>
|
jpayne@1
|
14200 <Iteration_iter-num>271</Iteration_iter-num>
|
jpayne@1
|
14201 <Iteration_query-ID>Query_271</Iteration_query-ID>
|
jpayne@1
|
14202 <Iteration_query-def>fliC_g,m_Enteritidisstr_AKFZ01000001_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14203 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14204 <Iteration_hits>
|
jpayne@1
|
14205 <Hit>
|
jpayne@1
|
14206 <Hit_num>1</Hit_num>
|
jpayne@1
|
14207 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14208 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14209 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14210 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14211 <Hit_hsps>
|
jpayne@1
|
14212 <Hsp>
|
jpayne@1
|
14213 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14214 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14215 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14216 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14217 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14218 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14219 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14220 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14221 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14222 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14223 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14224 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14225 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14226 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14227 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14228 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14229 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14230 </Hsp>
|
jpayne@1
|
14231 </Hit_hsps>
|
jpayne@1
|
14232 </Hit>
|
jpayne@1
|
14233 </Iteration_hits>
|
jpayne@1
|
14234 <Iteration_stat>
|
jpayne@1
|
14235 <Statistics>
|
jpayne@1
|
14236 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14237 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14238 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14239 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14240 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14241 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14242 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14243 </Statistics>
|
jpayne@1
|
14244 </Iteration_stat>
|
jpayne@1
|
14245 </Iteration>
|
jpayne@1
|
14246 <Iteration>
|
jpayne@1
|
14247 <Iteration_iter-num>272</Iteration_iter-num>
|
jpayne@1
|
14248 <Iteration_query-ID>Query_272</Iteration_query-ID>
|
jpayne@1
|
14249 <Iteration_query-def>fliC_g,m_Enteritidisstr_AKGA01000008_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14250 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14251 <Iteration_hits>
|
jpayne@1
|
14252 <Hit>
|
jpayne@1
|
14253 <Hit_num>1</Hit_num>
|
jpayne@1
|
14254 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14255 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14256 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14257 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14258 <Hit_hsps>
|
jpayne@1
|
14259 <Hsp>
|
jpayne@1
|
14260 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14261 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14262 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14263 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14264 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14265 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14266 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14267 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14268 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14269 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14270 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14271 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14272 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14273 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14274 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14275 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14276 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14277 </Hsp>
|
jpayne@1
|
14278 </Hit_hsps>
|
jpayne@1
|
14279 </Hit>
|
jpayne@1
|
14280 </Iteration_hits>
|
jpayne@1
|
14281 <Iteration_stat>
|
jpayne@1
|
14282 <Statistics>
|
jpayne@1
|
14283 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14284 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14285 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14286 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14287 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14288 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14289 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14290 </Statistics>
|
jpayne@1
|
14291 </Iteration_stat>
|
jpayne@1
|
14292 </Iteration>
|
jpayne@1
|
14293 <Iteration>
|
jpayne@1
|
14294 <Iteration_iter-num>273</Iteration_iter-num>
|
jpayne@1
|
14295 <Iteration_query-ID>Query_273</Iteration_query-ID>
|
jpayne@1
|
14296 <Iteration_query-def>fliC_g,m_Enteritidisstr_ATFS01000055_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14297 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14298 <Iteration_hits>
|
jpayne@1
|
14299 <Hit>
|
jpayne@1
|
14300 <Hit_num>1</Hit_num>
|
jpayne@1
|
14301 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14302 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14303 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14304 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14305 <Hit_hsps>
|
jpayne@1
|
14306 <Hsp>
|
jpayne@1
|
14307 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14308 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14309 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14310 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14311 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14312 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14313 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14314 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14315 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14316 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14317 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14318 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14319 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14320 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14321 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14322 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14323 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14324 </Hsp>
|
jpayne@1
|
14325 </Hit_hsps>
|
jpayne@1
|
14326 </Hit>
|
jpayne@1
|
14327 </Iteration_hits>
|
jpayne@1
|
14328 <Iteration_stat>
|
jpayne@1
|
14329 <Statistics>
|
jpayne@1
|
14330 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14331 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14332 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14333 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14334 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14335 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14336 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14337 </Statistics>
|
jpayne@1
|
14338 </Iteration_stat>
|
jpayne@1
|
14339 </Iteration>
|
jpayne@1
|
14340 <Iteration>
|
jpayne@1
|
14341 <Iteration_iter-num>274</Iteration_iter-num>
|
jpayne@1
|
14342 <Iteration_query-ID>Query_274</Iteration_query-ID>
|
jpayne@1
|
14343 <Iteration_query-def>fliC_g,m_Enteritidisstr_AHUQ01000034_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14344 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14345 <Iteration_hits>
|
jpayne@1
|
14346 <Hit>
|
jpayne@1
|
14347 <Hit_num>1</Hit_num>
|
jpayne@1
|
14348 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14349 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14350 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14351 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14352 <Hit_hsps>
|
jpayne@1
|
14353 <Hsp>
|
jpayne@1
|
14354 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14355 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14356 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14357 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14358 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14359 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14360 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14361 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14362 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14363 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14364 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14365 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14366 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14367 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14368 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14369 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14370 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14371 </Hsp>
|
jpayne@1
|
14372 </Hit_hsps>
|
jpayne@1
|
14373 </Hit>
|
jpayne@1
|
14374 </Iteration_hits>
|
jpayne@1
|
14375 <Iteration_stat>
|
jpayne@1
|
14376 <Statistics>
|
jpayne@1
|
14377 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14378 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14379 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14380 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14381 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14382 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14383 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14384 </Statistics>
|
jpayne@1
|
14385 </Iteration_stat>
|
jpayne@1
|
14386 </Iteration>
|
jpayne@1
|
14387 <Iteration>
|
jpayne@1
|
14388 <Iteration_iter-num>275</Iteration_iter-num>
|
jpayne@1
|
14389 <Iteration_query-ID>Query_275</Iteration_query-ID>
|
jpayne@1
|
14390 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGV01000126_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14391 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14392 <Iteration_hits>
|
jpayne@1
|
14393 <Hit>
|
jpayne@1
|
14394 <Hit_num>1</Hit_num>
|
jpayne@1
|
14395 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14396 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14397 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14398 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14399 <Hit_hsps>
|
jpayne@1
|
14400 <Hsp>
|
jpayne@1
|
14401 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14402 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14403 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14404 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14405 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14406 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14407 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14408 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14409 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14410 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14411 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14412 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14413 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14414 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14415 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14416 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14417 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14418 </Hsp>
|
jpayne@1
|
14419 </Hit_hsps>
|
jpayne@1
|
14420 </Hit>
|
jpayne@1
|
14421 </Iteration_hits>
|
jpayne@1
|
14422 <Iteration_stat>
|
jpayne@1
|
14423 <Statistics>
|
jpayne@1
|
14424 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14425 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14426 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14427 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14428 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14429 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14430 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14431 </Statistics>
|
jpayne@1
|
14432 </Iteration_stat>
|
jpayne@1
|
14433 </Iteration>
|
jpayne@1
|
14434 <Iteration>
|
jpayne@1
|
14435 <Iteration_iter-num>276</Iteration_iter-num>
|
jpayne@1
|
14436 <Iteration_query-ID>Query_276</Iteration_query-ID>
|
jpayne@1
|
14437 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHB01000088_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14438 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14439 <Iteration_hits>
|
jpayne@1
|
14440 <Hit>
|
jpayne@1
|
14441 <Hit_num>1</Hit_num>
|
jpayne@1
|
14442 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14443 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14444 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14445 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14446 <Hit_hsps>
|
jpayne@1
|
14447 <Hsp>
|
jpayne@1
|
14448 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14449 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14450 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14451 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14452 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14453 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14454 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14455 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14456 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14457 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14458 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14459 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14460 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14461 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14462 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14463 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14464 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14465 </Hsp>
|
jpayne@1
|
14466 </Hit_hsps>
|
jpayne@1
|
14467 </Hit>
|
jpayne@1
|
14468 </Iteration_hits>
|
jpayne@1
|
14469 <Iteration_stat>
|
jpayne@1
|
14470 <Statistics>
|
jpayne@1
|
14471 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14472 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14473 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14474 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14475 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14476 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14477 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14478 </Statistics>
|
jpayne@1
|
14479 </Iteration_stat>
|
jpayne@1
|
14480 </Iteration>
|
jpayne@1
|
14481 <Iteration>
|
jpayne@1
|
14482 <Iteration_iter-num>277</Iteration_iter-num>
|
jpayne@1
|
14483 <Iteration_query-ID>Query_277</Iteration_query-ID>
|
jpayne@1
|
14484 <Iteration_query-def>fliC_g,m_Enteritidisstr_AHUP01000090_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14485 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14486 <Iteration_hits>
|
jpayne@1
|
14487 <Hit>
|
jpayne@1
|
14488 <Hit_num>1</Hit_num>
|
jpayne@1
|
14489 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14490 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14491 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14492 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14493 <Hit_hsps>
|
jpayne@1
|
14494 <Hsp>
|
jpayne@1
|
14495 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14496 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14497 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14498 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14499 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14500 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14501 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14502 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14503 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14504 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14505 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14506 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14507 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14508 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14509 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14510 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14511 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14512 </Hsp>
|
jpayne@1
|
14513 </Hit_hsps>
|
jpayne@1
|
14514 </Hit>
|
jpayne@1
|
14515 </Iteration_hits>
|
jpayne@1
|
14516 <Iteration_stat>
|
jpayne@1
|
14517 <Statistics>
|
jpayne@1
|
14518 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14519 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14520 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14521 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14522 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14523 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14524 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14525 </Statistics>
|
jpayne@1
|
14526 </Iteration_stat>
|
jpayne@1
|
14527 </Iteration>
|
jpayne@1
|
14528 <Iteration>
|
jpayne@1
|
14529 <Iteration_iter-num>278</Iteration_iter-num>
|
jpayne@1
|
14530 <Iteration_query-ID>Query_278</Iteration_query-ID>
|
jpayne@1
|
14531 <Iteration_query-def>fliC_g,m_Enteritidisstr_AHUM01000184_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14532 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14533 <Iteration_hits>
|
jpayne@1
|
14534 <Hit>
|
jpayne@1
|
14535 <Hit_num>1</Hit_num>
|
jpayne@1
|
14536 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14537 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14538 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14539 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14540 <Hit_hsps>
|
jpayne@1
|
14541 <Hsp>
|
jpayne@1
|
14542 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14543 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14544 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14545 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14546 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14547 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14548 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14549 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14550 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14551 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14552 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14553 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14554 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14555 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14556 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14557 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14558 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14559 </Hsp>
|
jpayne@1
|
14560 </Hit_hsps>
|
jpayne@1
|
14561 </Hit>
|
jpayne@1
|
14562 </Iteration_hits>
|
jpayne@1
|
14563 <Iteration_stat>
|
jpayne@1
|
14564 <Statistics>
|
jpayne@1
|
14565 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14566 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14567 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14568 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14569 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14570 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14571 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14572 </Statistics>
|
jpayne@1
|
14573 </Iteration_stat>
|
jpayne@1
|
14574 </Iteration>
|
jpayne@1
|
14575 <Iteration>
|
jpayne@1
|
14576 <Iteration_iter-num>279</Iteration_iter-num>
|
jpayne@1
|
14577 <Iteration_query-ID>Query_279</Iteration_query-ID>
|
jpayne@1
|
14578 <Iteration_query-def>fliC_g,m_Enteritidisstr_ATFT01000006_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14579 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14580 <Iteration_hits>
|
jpayne@1
|
14581 <Hit>
|
jpayne@1
|
14582 <Hit_num>1</Hit_num>
|
jpayne@1
|
14583 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14584 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14585 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14586 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14587 <Hit_hsps>
|
jpayne@1
|
14588 <Hsp>
|
jpayne@1
|
14589 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14590 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14591 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14592 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14593 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14594 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14595 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14596 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14597 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14598 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14599 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14600 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14601 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14602 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14603 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14604 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14605 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14606 </Hsp>
|
jpayne@1
|
14607 </Hit_hsps>
|
jpayne@1
|
14608 </Hit>
|
jpayne@1
|
14609 </Iteration_hits>
|
jpayne@1
|
14610 <Iteration_stat>
|
jpayne@1
|
14611 <Statistics>
|
jpayne@1
|
14612 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14613 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14614 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14615 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14616 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14617 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14618 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14619 </Statistics>
|
jpayne@1
|
14620 </Iteration_stat>
|
jpayne@1
|
14621 </Iteration>
|
jpayne@1
|
14622 <Iteration>
|
jpayne@1
|
14623 <Iteration_iter-num>280</Iteration_iter-num>
|
jpayne@1
|
14624 <Iteration_query-ID>Query_280</Iteration_query-ID>
|
jpayne@1
|
14625 <Iteration_query-def>fliC_g,m_Enteritidisstr_ATFU01000045_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14626 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14627 <Iteration_hits>
|
jpayne@1
|
14628 <Hit>
|
jpayne@1
|
14629 <Hit_num>1</Hit_num>
|
jpayne@1
|
14630 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14631 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14632 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14633 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14634 <Hit_hsps>
|
jpayne@1
|
14635 <Hsp>
|
jpayne@1
|
14636 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14637 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14638 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14639 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14640 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14641 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14642 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14643 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14644 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14645 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14646 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14647 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14648 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14649 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14650 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14651 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14652 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14653 </Hsp>
|
jpayne@1
|
14654 </Hit_hsps>
|
jpayne@1
|
14655 </Hit>
|
jpayne@1
|
14656 </Iteration_hits>
|
jpayne@1
|
14657 <Iteration_stat>
|
jpayne@1
|
14658 <Statistics>
|
jpayne@1
|
14659 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14660 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14661 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14662 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14663 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14664 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14665 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14666 </Statistics>
|
jpayne@1
|
14667 </Iteration_stat>
|
jpayne@1
|
14668 </Iteration>
|
jpayne@1
|
14669 <Iteration>
|
jpayne@1
|
14670 <Iteration_iter-num>281</Iteration_iter-num>
|
jpayne@1
|
14671 <Iteration_query-ID>Query_281</Iteration_query-ID>
|
jpayne@1
|
14672 <Iteration_query-def>fliC_g,m_Enteritidisstr_ATFV01000087_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14673 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14674 <Iteration_hits>
|
jpayne@1
|
14675 <Hit>
|
jpayne@1
|
14676 <Hit_num>1</Hit_num>
|
jpayne@1
|
14677 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14678 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14679 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14680 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14681 <Hit_hsps>
|
jpayne@1
|
14682 <Hsp>
|
jpayne@1
|
14683 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14684 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14685 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14686 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14687 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14688 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14689 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14690 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14691 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14692 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14693 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14694 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14695 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14696 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14697 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14698 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14699 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14700 </Hsp>
|
jpayne@1
|
14701 </Hit_hsps>
|
jpayne@1
|
14702 </Hit>
|
jpayne@1
|
14703 </Iteration_hits>
|
jpayne@1
|
14704 <Iteration_stat>
|
jpayne@1
|
14705 <Statistics>
|
jpayne@1
|
14706 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14707 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14708 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14709 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14710 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14711 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14712 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14713 </Statistics>
|
jpayne@1
|
14714 </Iteration_stat>
|
jpayne@1
|
14715 </Iteration>
|
jpayne@1
|
14716 <Iteration>
|
jpayne@1
|
14717 <Iteration_iter-num>282</Iteration_iter-num>
|
jpayne@1
|
14718 <Iteration_query-ID>Query_282</Iteration_query-ID>
|
jpayne@1
|
14719 <Iteration_query-def>fliC_g,m_Enteritidisstr_AJVD01000007_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14720 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14721 <Iteration_hits>
|
jpayne@1
|
14722 <Hit>
|
jpayne@1
|
14723 <Hit_num>1</Hit_num>
|
jpayne@1
|
14724 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14725 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14726 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14727 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14728 <Hit_hsps>
|
jpayne@1
|
14729 <Hsp>
|
jpayne@1
|
14730 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14731 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14732 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14733 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14734 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14735 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14736 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14737 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14738 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14739 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14740 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14741 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14742 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14743 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14744 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14745 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14746 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14747 </Hsp>
|
jpayne@1
|
14748 </Hit_hsps>
|
jpayne@1
|
14749 </Hit>
|
jpayne@1
|
14750 </Iteration_hits>
|
jpayne@1
|
14751 <Iteration_stat>
|
jpayne@1
|
14752 <Statistics>
|
jpayne@1
|
14753 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14754 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14755 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14756 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14757 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14758 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14759 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14760 </Statistics>
|
jpayne@1
|
14761 </Iteration_stat>
|
jpayne@1
|
14762 </Iteration>
|
jpayne@1
|
14763 <Iteration>
|
jpayne@1
|
14764 <Iteration_iter-num>283</Iteration_iter-num>
|
jpayne@1
|
14765 <Iteration_query-ID>Query_283</Iteration_query-ID>
|
jpayne@1
|
14766 <Iteration_query-def>fliC_g,m_Enteritidisstr_ATFW01000015_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14767 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14768 <Iteration_hits>
|
jpayne@1
|
14769 <Hit>
|
jpayne@1
|
14770 <Hit_num>1</Hit_num>
|
jpayne@1
|
14771 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14772 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14773 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14774 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14775 <Hit_hsps>
|
jpayne@1
|
14776 <Hsp>
|
jpayne@1
|
14777 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14778 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14779 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14780 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14781 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14782 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14783 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14784 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14785 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14786 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14787 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14788 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14789 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14790 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14791 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14792 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14793 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14794 </Hsp>
|
jpayne@1
|
14795 </Hit_hsps>
|
jpayne@1
|
14796 </Hit>
|
jpayne@1
|
14797 </Iteration_hits>
|
jpayne@1
|
14798 <Iteration_stat>
|
jpayne@1
|
14799 <Statistics>
|
jpayne@1
|
14800 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14801 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14802 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14803 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14804 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14805 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14806 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14807 </Statistics>
|
jpayne@1
|
14808 </Iteration_stat>
|
jpayne@1
|
14809 </Iteration>
|
jpayne@1
|
14810 <Iteration>
|
jpayne@1
|
14811 <Iteration_iter-num>284</Iteration_iter-num>
|
jpayne@1
|
14812 <Iteration_query-ID>Query_284</Iteration_query-ID>
|
jpayne@1
|
14813 <Iteration_query-def>fliC_g,m_Enteritidisstr_ATFX01000074_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14814 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14815 <Iteration_hits>
|
jpayne@1
|
14816 <Hit>
|
jpayne@1
|
14817 <Hit_num>1</Hit_num>
|
jpayne@1
|
14818 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14819 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14820 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14821 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14822 <Hit_hsps>
|
jpayne@1
|
14823 <Hsp>
|
jpayne@1
|
14824 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14825 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14826 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14827 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14828 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14829 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14830 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14831 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14832 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14833 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14834 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14835 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14836 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14837 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14838 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14839 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14840 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14841 </Hsp>
|
jpayne@1
|
14842 </Hit_hsps>
|
jpayne@1
|
14843 </Hit>
|
jpayne@1
|
14844 </Iteration_hits>
|
jpayne@1
|
14845 <Iteration_stat>
|
jpayne@1
|
14846 <Statistics>
|
jpayne@1
|
14847 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14848 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14849 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14850 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14851 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14852 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14853 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14854 </Statistics>
|
jpayne@1
|
14855 </Iteration_stat>
|
jpayne@1
|
14856 </Iteration>
|
jpayne@1
|
14857 <Iteration>
|
jpayne@1
|
14858 <Iteration_iter-num>285</Iteration_iter-num>
|
jpayne@1
|
14859 <Iteration_query-ID>Query_285</Iteration_query-ID>
|
jpayne@1
|
14860 <Iteration_query-def>fliC_g,m_Enteritidisstr_ATFY01000066_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14861 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14862 <Iteration_hits>
|
jpayne@1
|
14863 <Hit>
|
jpayne@1
|
14864 <Hit_num>1</Hit_num>
|
jpayne@1
|
14865 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14866 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14867 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14868 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14869 <Hit_hsps>
|
jpayne@1
|
14870 <Hsp>
|
jpayne@1
|
14871 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14872 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14873 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14874 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14875 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14876 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14877 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14878 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14879 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14880 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14881 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14882 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14883 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14884 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14885 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14886 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14887 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14888 </Hsp>
|
jpayne@1
|
14889 </Hit_hsps>
|
jpayne@1
|
14890 </Hit>
|
jpayne@1
|
14891 </Iteration_hits>
|
jpayne@1
|
14892 <Iteration_stat>
|
jpayne@1
|
14893 <Statistics>
|
jpayne@1
|
14894 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14895 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14896 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14897 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14898 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14899 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14900 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14901 </Statistics>
|
jpayne@1
|
14902 </Iteration_stat>
|
jpayne@1
|
14903 </Iteration>
|
jpayne@1
|
14904 <Iteration>
|
jpayne@1
|
14905 <Iteration_iter-num>286</Iteration_iter-num>
|
jpayne@1
|
14906 <Iteration_query-ID>Query_286</Iteration_query-ID>
|
jpayne@1
|
14907 <Iteration_query-def>fliC_g,m_Enteritidisstr_ATFZ01000055_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14908 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14909 <Iteration_hits>
|
jpayne@1
|
14910 <Hit>
|
jpayne@1
|
14911 <Hit_num>1</Hit_num>
|
jpayne@1
|
14912 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14913 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14914 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14915 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14916 <Hit_hsps>
|
jpayne@1
|
14917 <Hsp>
|
jpayne@1
|
14918 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14919 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14920 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14921 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14922 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14923 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14924 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14925 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14926 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14927 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14928 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14929 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14930 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14931 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14932 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14933 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14934 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14935 </Hsp>
|
jpayne@1
|
14936 </Hit_hsps>
|
jpayne@1
|
14937 </Hit>
|
jpayne@1
|
14938 </Iteration_hits>
|
jpayne@1
|
14939 <Iteration_stat>
|
jpayne@1
|
14940 <Statistics>
|
jpayne@1
|
14941 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14942 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14943 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14944 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14945 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14946 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14947 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14948 </Statistics>
|
jpayne@1
|
14949 </Iteration_stat>
|
jpayne@1
|
14950 </Iteration>
|
jpayne@1
|
14951 <Iteration>
|
jpayne@1
|
14952 <Iteration_iter-num>287</Iteration_iter-num>
|
jpayne@1
|
14953 <Iteration_query-ID>Query_287</Iteration_query-ID>
|
jpayne@1
|
14954 <Iteration_query-def>fliC_g,m_Enteritidisstr_ATGA01000071_g,m__1506</Iteration_query-def>
|
jpayne@1
|
14955 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
14956 <Iteration_hits>
|
jpayne@1
|
14957 <Hit>
|
jpayne@1
|
14958 <Hit_num>1</Hit_num>
|
jpayne@1
|
14959 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
14960 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
14961 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
14962 <Hit_len>1962</Hit_len>
|
jpayne@1
|
14963 <Hit_hsps>
|
jpayne@1
|
14964 <Hsp>
|
jpayne@1
|
14965 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
14966 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
14967 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
14968 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
14969 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
14970 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
14971 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
14972 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
14973 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
14974 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
14975 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
14976 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
14977 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
14978 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
14979 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
14980 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
14981 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
14982 </Hsp>
|
jpayne@1
|
14983 </Hit_hsps>
|
jpayne@1
|
14984 </Hit>
|
jpayne@1
|
14985 </Iteration_hits>
|
jpayne@1
|
14986 <Iteration_stat>
|
jpayne@1
|
14987 <Statistics>
|
jpayne@1
|
14988 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
14989 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
14990 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
14991 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
14992 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
14993 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
14994 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
14995 </Statistics>
|
jpayne@1
|
14996 </Iteration_stat>
|
jpayne@1
|
14997 </Iteration>
|
jpayne@1
|
14998 <Iteration>
|
jpayne@1
|
14999 <Iteration_iter-num>288</Iteration_iter-num>
|
jpayne@1
|
15000 <Iteration_query-ID>Query_288</Iteration_query-ID>
|
jpayne@1
|
15001 <Iteration_query-def>fliC_g,m_Enteritidisstr_AKFX01000001_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15002 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15003 <Iteration_hits>
|
jpayne@1
|
15004 <Hit>
|
jpayne@1
|
15005 <Hit_num>1</Hit_num>
|
jpayne@1
|
15006 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15007 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15008 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15009 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15010 <Hit_hsps>
|
jpayne@1
|
15011 <Hsp>
|
jpayne@1
|
15012 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15013 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15014 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15015 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15016 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15017 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15018 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15019 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15020 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15021 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15022 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15023 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15024 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15025 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15026 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15027 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15028 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15029 </Hsp>
|
jpayne@1
|
15030 </Hit_hsps>
|
jpayne@1
|
15031 </Hit>
|
jpayne@1
|
15032 </Iteration_hits>
|
jpayne@1
|
15033 <Iteration_stat>
|
jpayne@1
|
15034 <Statistics>
|
jpayne@1
|
15035 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15036 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15037 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15038 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15039 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15040 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15041 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15042 </Statistics>
|
jpayne@1
|
15043 </Iteration_stat>
|
jpayne@1
|
15044 </Iteration>
|
jpayne@1
|
15045 <Iteration>
|
jpayne@1
|
15046 <Iteration_iter-num>289</Iteration_iter-num>
|
jpayne@1
|
15047 <Iteration_query-ID>Query_289</Iteration_query-ID>
|
jpayne@1
|
15048 <Iteration_query-def>fliC_g,m_Enteritidisstr_AKFW01000001_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15049 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15050 <Iteration_hits>
|
jpayne@1
|
15051 <Hit>
|
jpayne@1
|
15052 <Hit_num>1</Hit_num>
|
jpayne@1
|
15053 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15054 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15055 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15056 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15057 <Hit_hsps>
|
jpayne@1
|
15058 <Hsp>
|
jpayne@1
|
15059 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15060 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15061 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15062 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15063 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15064 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15065 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15066 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15067 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15068 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15069 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15070 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15071 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15072 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15073 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15074 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15075 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15076 </Hsp>
|
jpayne@1
|
15077 </Hit_hsps>
|
jpayne@1
|
15078 </Hit>
|
jpayne@1
|
15079 </Iteration_hits>
|
jpayne@1
|
15080 <Iteration_stat>
|
jpayne@1
|
15081 <Statistics>
|
jpayne@1
|
15082 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15083 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15084 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15085 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15086 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15087 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15088 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15089 </Statistics>
|
jpayne@1
|
15090 </Iteration_stat>
|
jpayne@1
|
15091 </Iteration>
|
jpayne@1
|
15092 <Iteration>
|
jpayne@1
|
15093 <Iteration_iter-num>290</Iteration_iter-num>
|
jpayne@1
|
15094 <Iteration_query-ID>Query_290</Iteration_query-ID>
|
jpayne@1
|
15095 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEX01000012_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15096 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15097 <Iteration_hits>
|
jpayne@1
|
15098 <Hit>
|
jpayne@1
|
15099 <Hit_num>1</Hit_num>
|
jpayne@1
|
15100 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15101 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15102 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15103 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15104 <Hit_hsps>
|
jpayne@1
|
15105 <Hsp>
|
jpayne@1
|
15106 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15107 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15108 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15109 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15110 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15111 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15112 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15113 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15114 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15115 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15116 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15117 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15118 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15119 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15120 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15121 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15122 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15123 </Hsp>
|
jpayne@1
|
15124 </Hit_hsps>
|
jpayne@1
|
15125 </Hit>
|
jpayne@1
|
15126 </Iteration_hits>
|
jpayne@1
|
15127 <Iteration_stat>
|
jpayne@1
|
15128 <Statistics>
|
jpayne@1
|
15129 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15130 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15131 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15132 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15133 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15134 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15135 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15136 </Statistics>
|
jpayne@1
|
15137 </Iteration_stat>
|
jpayne@1
|
15138 </Iteration>
|
jpayne@1
|
15139 <Iteration>
|
jpayne@1
|
15140 <Iteration_iter-num>291</Iteration_iter-num>
|
jpayne@1
|
15141 <Iteration_query-ID>Query_291</Iteration_query-ID>
|
jpayne@1
|
15142 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHD01000038_g,m__1507</Iteration_query-def>
|
jpayne@1
|
15143 <Iteration_query-len>1507</Iteration_query-len>
|
jpayne@1
|
15144 <Iteration_hits>
|
jpayne@1
|
15145 <Hit>
|
jpayne@1
|
15146 <Hit_num>1</Hit_num>
|
jpayne@1
|
15147 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15148 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15149 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15150 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15151 <Hit_hsps>
|
jpayne@1
|
15152 <Hsp>
|
jpayne@1
|
15153 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15154 <Hsp_bit-score>2582.74</Hsp_bit-score>
|
jpayne@1
|
15155 <Hsp_score>1398</Hsp_score>
|
jpayne@1
|
15156 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15157 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15158 <Hsp_query-to>1507</Hsp_query-to>
|
jpayne@1
|
15159 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15160 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15161 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15162 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15163 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15164 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15165 <Hsp_gaps>1</Hsp_gaps>
|
jpayne@1
|
15166 <Hsp_align-len>1507</Hsp_align-len>
|
jpayne@1
|
15167 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGACAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15168 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAG-CAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15169 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15170 </Hsp>
|
jpayne@1
|
15171 </Hit_hsps>
|
jpayne@1
|
15172 </Hit>
|
jpayne@1
|
15173 </Iteration_hits>
|
jpayne@1
|
15174 <Iteration_stat>
|
jpayne@1
|
15175 <Statistics>
|
jpayne@1
|
15176 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15177 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15178 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15179 <Statistics_eff-space>81442344</Statistics_eff-space>
|
jpayne@1
|
15180 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15181 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15182 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15183 </Statistics>
|
jpayne@1
|
15184 </Iteration_stat>
|
jpayne@1
|
15185 </Iteration>
|
jpayne@1
|
15186 <Iteration>
|
jpayne@1
|
15187 <Iteration_iter-num>292</Iteration_iter-num>
|
jpayne@1
|
15188 <Iteration_query-ID>Query_292</Iteration_query-ID>
|
jpayne@1
|
15189 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFD01000137_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15190 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15191 <Iteration_hits>
|
jpayne@1
|
15192 <Hit>
|
jpayne@1
|
15193 <Hit_num>1</Hit_num>
|
jpayne@1
|
15194 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15195 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15196 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15197 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15198 <Hit_hsps>
|
jpayne@1
|
15199 <Hsp>
|
jpayne@1
|
15200 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15201 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15202 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15203 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15204 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15205 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15206 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15207 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15208 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15209 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15210 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15211 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15212 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15213 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15214 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15215 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15216 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15217 </Hsp>
|
jpayne@1
|
15218 </Hit_hsps>
|
jpayne@1
|
15219 </Hit>
|
jpayne@1
|
15220 </Iteration_hits>
|
jpayne@1
|
15221 <Iteration_stat>
|
jpayne@1
|
15222 <Statistics>
|
jpayne@1
|
15223 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15224 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15225 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15226 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15227 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15228 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15229 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15230 </Statistics>
|
jpayne@1
|
15231 </Iteration_stat>
|
jpayne@1
|
15232 </Iteration>
|
jpayne@1
|
15233 <Iteration>
|
jpayne@1
|
15234 <Iteration_iter-num>293</Iteration_iter-num>
|
jpayne@1
|
15235 <Iteration_query-ID>Query_293</Iteration_query-ID>
|
jpayne@1
|
15236 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHX01000067_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15237 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15238 <Iteration_hits>
|
jpayne@1
|
15239 <Hit>
|
jpayne@1
|
15240 <Hit_num>1</Hit_num>
|
jpayne@1
|
15241 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15242 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15243 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15244 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15245 <Hit_hsps>
|
jpayne@1
|
15246 <Hsp>
|
jpayne@1
|
15247 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15248 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15249 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15250 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15251 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15252 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15253 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15254 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15255 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15256 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15257 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15258 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15259 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15260 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15261 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15262 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15263 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15264 </Hsp>
|
jpayne@1
|
15265 </Hit_hsps>
|
jpayne@1
|
15266 </Hit>
|
jpayne@1
|
15267 </Iteration_hits>
|
jpayne@1
|
15268 <Iteration_stat>
|
jpayne@1
|
15269 <Statistics>
|
jpayne@1
|
15270 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15271 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15272 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15273 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15274 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15275 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15276 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15277 </Statistics>
|
jpayne@1
|
15278 </Iteration_stat>
|
jpayne@1
|
15279 </Iteration>
|
jpayne@1
|
15280 <Iteration>
|
jpayne@1
|
15281 <Iteration_iter-num>294</Iteration_iter-num>
|
jpayne@1
|
15282 <Iteration_query-ID>Query_294</Iteration_query-ID>
|
jpayne@1
|
15283 <Iteration_query-def>fliC_g,m_Enteritidisstr_AHUO01000138_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15284 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15285 <Iteration_hits>
|
jpayne@1
|
15286 <Hit>
|
jpayne@1
|
15287 <Hit_num>1</Hit_num>
|
jpayne@1
|
15288 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15289 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15290 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15291 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15292 <Hit_hsps>
|
jpayne@1
|
15293 <Hsp>
|
jpayne@1
|
15294 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15295 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15296 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15297 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15298 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15299 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15300 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15301 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15302 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15303 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15304 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15305 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15306 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15307 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15308 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15309 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15310 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15311 </Hsp>
|
jpayne@1
|
15312 </Hit_hsps>
|
jpayne@1
|
15313 </Hit>
|
jpayne@1
|
15314 </Iteration_hits>
|
jpayne@1
|
15315 <Iteration_stat>
|
jpayne@1
|
15316 <Statistics>
|
jpayne@1
|
15317 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15318 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15319 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15320 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15321 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15322 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15323 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15324 </Statistics>
|
jpayne@1
|
15325 </Iteration_stat>
|
jpayne@1
|
15326 </Iteration>
|
jpayne@1
|
15327 <Iteration>
|
jpayne@1
|
15328 <Iteration_iter-num>295</Iteration_iter-num>
|
jpayne@1
|
15329 <Iteration_query-ID>Query_295</Iteration_query-ID>
|
jpayne@1
|
15330 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEN01000029_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15331 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15332 <Iteration_hits>
|
jpayne@1
|
15333 <Hit>
|
jpayne@1
|
15334 <Hit_num>1</Hit_num>
|
jpayne@1
|
15335 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15336 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15337 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15338 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15339 <Hit_hsps>
|
jpayne@1
|
15340 <Hsp>
|
jpayne@1
|
15341 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15342 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15343 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15344 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15345 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15346 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15347 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15348 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15349 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15350 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15351 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15352 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15353 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15354 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15355 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15356 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15357 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15358 </Hsp>
|
jpayne@1
|
15359 </Hit_hsps>
|
jpayne@1
|
15360 </Hit>
|
jpayne@1
|
15361 </Iteration_hits>
|
jpayne@1
|
15362 <Iteration_stat>
|
jpayne@1
|
15363 <Statistics>
|
jpayne@1
|
15364 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15365 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15366 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15367 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15368 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15369 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15370 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15371 </Statistics>
|
jpayne@1
|
15372 </Iteration_stat>
|
jpayne@1
|
15373 </Iteration>
|
jpayne@1
|
15374 <Iteration>
|
jpayne@1
|
15375 <Iteration_iter-num>296</Iteration_iter-num>
|
jpayne@1
|
15376 <Iteration_query-ID>Query_296</Iteration_query-ID>
|
jpayne@1
|
15377 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFB01000043_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15378 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15379 <Iteration_hits>
|
jpayne@1
|
15380 <Hit>
|
jpayne@1
|
15381 <Hit_num>1</Hit_num>
|
jpayne@1
|
15382 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15383 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15384 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15385 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15386 <Hit_hsps>
|
jpayne@1
|
15387 <Hsp>
|
jpayne@1
|
15388 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15389 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15390 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15391 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15392 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15393 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15394 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15395 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15396 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15397 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15398 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15399 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15400 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15401 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15402 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15403 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15404 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15405 </Hsp>
|
jpayne@1
|
15406 </Hit_hsps>
|
jpayne@1
|
15407 </Hit>
|
jpayne@1
|
15408 </Iteration_hits>
|
jpayne@1
|
15409 <Iteration_stat>
|
jpayne@1
|
15410 <Statistics>
|
jpayne@1
|
15411 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15412 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15413 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15414 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15415 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15416 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15417 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15418 </Statistics>
|
jpayne@1
|
15419 </Iteration_stat>
|
jpayne@1
|
15420 </Iteration>
|
jpayne@1
|
15421 <Iteration>
|
jpayne@1
|
15422 <Iteration_iter-num>297</Iteration_iter-num>
|
jpayne@1
|
15423 <Iteration_query-ID>Query_297</Iteration_query-ID>
|
jpayne@1
|
15424 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALID01000034_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15425 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15426 <Iteration_hits>
|
jpayne@1
|
15427 <Hit>
|
jpayne@1
|
15428 <Hit_num>1</Hit_num>
|
jpayne@1
|
15429 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15430 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15431 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15432 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15433 <Hit_hsps>
|
jpayne@1
|
15434 <Hsp>
|
jpayne@1
|
15435 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15436 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15437 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15438 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15439 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15440 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15441 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15442 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15443 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15444 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15445 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15446 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15447 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15448 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15449 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15450 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15451 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15452 </Hsp>
|
jpayne@1
|
15453 </Hit_hsps>
|
jpayne@1
|
15454 </Hit>
|
jpayne@1
|
15455 </Iteration_hits>
|
jpayne@1
|
15456 <Iteration_stat>
|
jpayne@1
|
15457 <Statistics>
|
jpayne@1
|
15458 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15459 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15460 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15461 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15462 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15463 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15464 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15465 </Statistics>
|
jpayne@1
|
15466 </Iteration_stat>
|
jpayne@1
|
15467 </Iteration>
|
jpayne@1
|
15468 <Iteration>
|
jpayne@1
|
15469 <Iteration_iter-num>298</Iteration_iter-num>
|
jpayne@1
|
15470 <Iteration_query-ID>Query_298</Iteration_query-ID>
|
jpayne@1
|
15471 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHE01000053_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15472 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15473 <Iteration_hits>
|
jpayne@1
|
15474 <Hit>
|
jpayne@1
|
15475 <Hit_num>1</Hit_num>
|
jpayne@1
|
15476 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15477 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15478 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15479 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15480 <Hit_hsps>
|
jpayne@1
|
15481 <Hsp>
|
jpayne@1
|
15482 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15483 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15484 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15485 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15486 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15487 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15488 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15489 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15490 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15491 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15492 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15493 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15494 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15495 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15496 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15497 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15498 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15499 </Hsp>
|
jpayne@1
|
15500 </Hit_hsps>
|
jpayne@1
|
15501 </Hit>
|
jpayne@1
|
15502 </Iteration_hits>
|
jpayne@1
|
15503 <Iteration_stat>
|
jpayne@1
|
15504 <Statistics>
|
jpayne@1
|
15505 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15506 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15507 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15508 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15509 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15510 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15511 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15512 </Statistics>
|
jpayne@1
|
15513 </Iteration_stat>
|
jpayne@1
|
15514 </Iteration>
|
jpayne@1
|
15515 <Iteration>
|
jpayne@1
|
15516 <Iteration_iter-num>299</Iteration_iter-num>
|
jpayne@1
|
15517 <Iteration_query-ID>Query_299</Iteration_query-ID>
|
jpayne@1
|
15518 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHF01000001_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15519 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15520 <Iteration_hits>
|
jpayne@1
|
15521 <Hit>
|
jpayne@1
|
15522 <Hit_num>1</Hit_num>
|
jpayne@1
|
15523 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15524 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15525 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15526 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15527 <Hit_hsps>
|
jpayne@1
|
15528 <Hsp>
|
jpayne@1
|
15529 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15530 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15531 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15532 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15533 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15534 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15535 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15536 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15537 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15538 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15539 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15540 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15541 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15542 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15543 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15544 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15545 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15546 </Hsp>
|
jpayne@1
|
15547 </Hit_hsps>
|
jpayne@1
|
15548 </Hit>
|
jpayne@1
|
15549 </Iteration_hits>
|
jpayne@1
|
15550 <Iteration_stat>
|
jpayne@1
|
15551 <Statistics>
|
jpayne@1
|
15552 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15553 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15554 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15555 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15556 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15557 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15558 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15559 </Statistics>
|
jpayne@1
|
15560 </Iteration_stat>
|
jpayne@1
|
15561 </Iteration>
|
jpayne@1
|
15562 <Iteration>
|
jpayne@1
|
15563 <Iteration_iter-num>300</Iteration_iter-num>
|
jpayne@1
|
15564 <Iteration_query-ID>Query_300</Iteration_query-ID>
|
jpayne@1
|
15565 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHU01000052_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15566 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15567 <Iteration_hits>
|
jpayne@1
|
15568 <Hit>
|
jpayne@1
|
15569 <Hit_num>1</Hit_num>
|
jpayne@1
|
15570 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15571 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15572 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15573 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15574 <Hit_hsps>
|
jpayne@1
|
15575 <Hsp>
|
jpayne@1
|
15576 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15577 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15578 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15579 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15580 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15581 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15582 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15583 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15584 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15585 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15586 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15587 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15588 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15589 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15590 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15591 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15592 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15593 </Hsp>
|
jpayne@1
|
15594 </Hit_hsps>
|
jpayne@1
|
15595 </Hit>
|
jpayne@1
|
15596 </Iteration_hits>
|
jpayne@1
|
15597 <Iteration_stat>
|
jpayne@1
|
15598 <Statistics>
|
jpayne@1
|
15599 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15600 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15601 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15602 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15603 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15604 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15605 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15606 </Statistics>
|
jpayne@1
|
15607 </Iteration_stat>
|
jpayne@1
|
15608 </Iteration>
|
jpayne@1
|
15609 <Iteration>
|
jpayne@1
|
15610 <Iteration_iter-num>301</Iteration_iter-num>
|
jpayne@1
|
15611 <Iteration_query-ID>Query_301</Iteration_query-ID>
|
jpayne@1
|
15612 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHG01000036_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15613 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15614 <Iteration_hits>
|
jpayne@1
|
15615 <Hit>
|
jpayne@1
|
15616 <Hit_num>1</Hit_num>
|
jpayne@1
|
15617 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15618 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15619 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15620 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15621 <Hit_hsps>
|
jpayne@1
|
15622 <Hsp>
|
jpayne@1
|
15623 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15624 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15625 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15626 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15627 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15628 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15629 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15630 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15631 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15632 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15633 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15634 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15635 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15636 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15637 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15638 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15639 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15640 </Hsp>
|
jpayne@1
|
15641 </Hit_hsps>
|
jpayne@1
|
15642 </Hit>
|
jpayne@1
|
15643 </Iteration_hits>
|
jpayne@1
|
15644 <Iteration_stat>
|
jpayne@1
|
15645 <Statistics>
|
jpayne@1
|
15646 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15647 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15648 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15649 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15650 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15651 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15652 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15653 </Statistics>
|
jpayne@1
|
15654 </Iteration_stat>
|
jpayne@1
|
15655 </Iteration>
|
jpayne@1
|
15656 <Iteration>
|
jpayne@1
|
15657 <Iteration_iter-num>302</Iteration_iter-num>
|
jpayne@1
|
15658 <Iteration_query-ID>Query_302</Iteration_query-ID>
|
jpayne@1
|
15659 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHT01000004_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15660 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15661 <Iteration_hits>
|
jpayne@1
|
15662 <Hit>
|
jpayne@1
|
15663 <Hit_num>1</Hit_num>
|
jpayne@1
|
15664 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15665 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15666 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15667 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15668 <Hit_hsps>
|
jpayne@1
|
15669 <Hsp>
|
jpayne@1
|
15670 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15671 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15672 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15673 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15674 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15675 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15676 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15677 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15678 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15679 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15680 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15681 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15682 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15683 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15684 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15685 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15686 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15687 </Hsp>
|
jpayne@1
|
15688 </Hit_hsps>
|
jpayne@1
|
15689 </Hit>
|
jpayne@1
|
15690 </Iteration_hits>
|
jpayne@1
|
15691 <Iteration_stat>
|
jpayne@1
|
15692 <Statistics>
|
jpayne@1
|
15693 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15694 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15695 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15696 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15697 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15698 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15699 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15700 </Statistics>
|
jpayne@1
|
15701 </Iteration_stat>
|
jpayne@1
|
15702 </Iteration>
|
jpayne@1
|
15703 <Iteration>
|
jpayne@1
|
15704 <Iteration_iter-num>303</Iteration_iter-num>
|
jpayne@1
|
15705 <Iteration_query-ID>Query_303</Iteration_query-ID>
|
jpayne@1
|
15706 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGK01000045_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15707 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15708 <Iteration_hits>
|
jpayne@1
|
15709 <Hit>
|
jpayne@1
|
15710 <Hit_num>1</Hit_num>
|
jpayne@1
|
15711 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15712 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15713 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15714 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15715 <Hit_hsps>
|
jpayne@1
|
15716 <Hsp>
|
jpayne@1
|
15717 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15718 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15719 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15720 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15721 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15722 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15723 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15724 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15725 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15726 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15727 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15728 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15729 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15730 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15731 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15732 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15733 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15734 </Hsp>
|
jpayne@1
|
15735 </Hit_hsps>
|
jpayne@1
|
15736 </Hit>
|
jpayne@1
|
15737 </Iteration_hits>
|
jpayne@1
|
15738 <Iteration_stat>
|
jpayne@1
|
15739 <Statistics>
|
jpayne@1
|
15740 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15741 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15742 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15743 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15744 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15745 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15746 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15747 </Statistics>
|
jpayne@1
|
15748 </Iteration_stat>
|
jpayne@1
|
15749 </Iteration>
|
jpayne@1
|
15750 <Iteration>
|
jpayne@1
|
15751 <Iteration_iter-num>304</Iteration_iter-num>
|
jpayne@1
|
15752 <Iteration_query-ID>Query_304</Iteration_query-ID>
|
jpayne@1
|
15753 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFC01000013_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15754 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15755 <Iteration_hits>
|
jpayne@1
|
15756 <Hit>
|
jpayne@1
|
15757 <Hit_num>1</Hit_num>
|
jpayne@1
|
15758 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15759 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15760 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15761 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15762 <Hit_hsps>
|
jpayne@1
|
15763 <Hsp>
|
jpayne@1
|
15764 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15765 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15766 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15767 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15768 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15769 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15770 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15771 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15772 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15773 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15774 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15775 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15776 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15777 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15778 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15779 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15780 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15781 </Hsp>
|
jpayne@1
|
15782 </Hit_hsps>
|
jpayne@1
|
15783 </Hit>
|
jpayne@1
|
15784 </Iteration_hits>
|
jpayne@1
|
15785 <Iteration_stat>
|
jpayne@1
|
15786 <Statistics>
|
jpayne@1
|
15787 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15788 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15789 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15790 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15791 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15792 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15793 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15794 </Statistics>
|
jpayne@1
|
15795 </Iteration_stat>
|
jpayne@1
|
15796 </Iteration>
|
jpayne@1
|
15797 <Iteration>
|
jpayne@1
|
15798 <Iteration_iter-num>305</Iteration_iter-num>
|
jpayne@1
|
15799 <Iteration_query-ID>Query_305</Iteration_query-ID>
|
jpayne@1
|
15800 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEO01000036_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15801 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15802 <Iteration_hits>
|
jpayne@1
|
15803 <Hit>
|
jpayne@1
|
15804 <Hit_num>1</Hit_num>
|
jpayne@1
|
15805 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15806 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15807 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15808 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15809 <Hit_hsps>
|
jpayne@1
|
15810 <Hsp>
|
jpayne@1
|
15811 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15812 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15813 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15814 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15815 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15816 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15817 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15818 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15819 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15820 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15821 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15822 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15823 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15824 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15825 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15826 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15827 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15828 </Hsp>
|
jpayne@1
|
15829 </Hit_hsps>
|
jpayne@1
|
15830 </Hit>
|
jpayne@1
|
15831 </Iteration_hits>
|
jpayne@1
|
15832 <Iteration_stat>
|
jpayne@1
|
15833 <Statistics>
|
jpayne@1
|
15834 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15835 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15836 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15837 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15838 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15839 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15840 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15841 </Statistics>
|
jpayne@1
|
15842 </Iteration_stat>
|
jpayne@1
|
15843 </Iteration>
|
jpayne@1
|
15844 <Iteration>
|
jpayne@1
|
15845 <Iteration_iter-num>306</Iteration_iter-num>
|
jpayne@1
|
15846 <Iteration_query-ID>Query_306</Iteration_query-ID>
|
jpayne@1
|
15847 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEP01000030_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15848 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15849 <Iteration_hits>
|
jpayne@1
|
15850 <Hit>
|
jpayne@1
|
15851 <Hit_num>1</Hit_num>
|
jpayne@1
|
15852 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15853 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15854 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15855 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15856 <Hit_hsps>
|
jpayne@1
|
15857 <Hsp>
|
jpayne@1
|
15858 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15859 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15860 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15861 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15862 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15863 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15864 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15865 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15866 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15867 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15868 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15869 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15870 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15871 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15872 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15873 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15874 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15875 </Hsp>
|
jpayne@1
|
15876 </Hit_hsps>
|
jpayne@1
|
15877 </Hit>
|
jpayne@1
|
15878 </Iteration_hits>
|
jpayne@1
|
15879 <Iteration_stat>
|
jpayne@1
|
15880 <Statistics>
|
jpayne@1
|
15881 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15882 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15883 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15884 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15885 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15886 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15887 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15888 </Statistics>
|
jpayne@1
|
15889 </Iteration_stat>
|
jpayne@1
|
15890 </Iteration>
|
jpayne@1
|
15891 <Iteration>
|
jpayne@1
|
15892 <Iteration_iter-num>307</Iteration_iter-num>
|
jpayne@1
|
15893 <Iteration_query-ID>Query_307</Iteration_query-ID>
|
jpayne@1
|
15894 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGO01000035_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15895 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15896 <Iteration_hits>
|
jpayne@1
|
15897 <Hit>
|
jpayne@1
|
15898 <Hit_num>1</Hit_num>
|
jpayne@1
|
15899 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15900 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15901 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15902 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15903 <Hit_hsps>
|
jpayne@1
|
15904 <Hsp>
|
jpayne@1
|
15905 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15906 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15907 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15908 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15909 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15910 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15911 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15912 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15913 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15914 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15915 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15916 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15917 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15918 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15919 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15920 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15921 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15922 </Hsp>
|
jpayne@1
|
15923 </Hit_hsps>
|
jpayne@1
|
15924 </Hit>
|
jpayne@1
|
15925 </Iteration_hits>
|
jpayne@1
|
15926 <Iteration_stat>
|
jpayne@1
|
15927 <Statistics>
|
jpayne@1
|
15928 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15929 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15930 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15931 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15932 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15933 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15934 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15935 </Statistics>
|
jpayne@1
|
15936 </Iteration_stat>
|
jpayne@1
|
15937 </Iteration>
|
jpayne@1
|
15938 <Iteration>
|
jpayne@1
|
15939 <Iteration_iter-num>308</Iteration_iter-num>
|
jpayne@1
|
15940 <Iteration_query-ID>Query_308</Iteration_query-ID>
|
jpayne@1
|
15941 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEM01000039_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15942 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15943 <Iteration_hits>
|
jpayne@1
|
15944 <Hit>
|
jpayne@1
|
15945 <Hit_num>1</Hit_num>
|
jpayne@1
|
15946 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15947 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15948 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15949 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15950 <Hit_hsps>
|
jpayne@1
|
15951 <Hsp>
|
jpayne@1
|
15952 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
15953 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
15954 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
15955 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
15956 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
15957 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
15958 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
15959 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
15960 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
15961 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
15962 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
15963 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
15964 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
15965 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
15966 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
15967 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
15968 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
15969 </Hsp>
|
jpayne@1
|
15970 </Hit_hsps>
|
jpayne@1
|
15971 </Hit>
|
jpayne@1
|
15972 </Iteration_hits>
|
jpayne@1
|
15973 <Iteration_stat>
|
jpayne@1
|
15974 <Statistics>
|
jpayne@1
|
15975 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
15976 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
15977 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
15978 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
15979 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
15980 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
15981 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
15982 </Statistics>
|
jpayne@1
|
15983 </Iteration_stat>
|
jpayne@1
|
15984 </Iteration>
|
jpayne@1
|
15985 <Iteration>
|
jpayne@1
|
15986 <Iteration_iter-num>309</Iteration_iter-num>
|
jpayne@1
|
15987 <Iteration_query-ID>Query_309</Iteration_query-ID>
|
jpayne@1
|
15988 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGM01000100_g,m__1506</Iteration_query-def>
|
jpayne@1
|
15989 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
15990 <Iteration_hits>
|
jpayne@1
|
15991 <Hit>
|
jpayne@1
|
15992 <Hit_num>1</Hit_num>
|
jpayne@1
|
15993 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
15994 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
15995 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
15996 <Hit_len>1962</Hit_len>
|
jpayne@1
|
15997 <Hit_hsps>
|
jpayne@1
|
15998 <Hsp>
|
jpayne@1
|
15999 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16000 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16001 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16002 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16003 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16004 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16005 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16006 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16007 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16008 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16009 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16010 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16011 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16012 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16013 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16014 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16015 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16016 </Hsp>
|
jpayne@1
|
16017 </Hit_hsps>
|
jpayne@1
|
16018 </Hit>
|
jpayne@1
|
16019 </Iteration_hits>
|
jpayne@1
|
16020 <Iteration_stat>
|
jpayne@1
|
16021 <Statistics>
|
jpayne@1
|
16022 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16023 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16024 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16025 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16026 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16027 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16028 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16029 </Statistics>
|
jpayne@1
|
16030 </Iteration_stat>
|
jpayne@1
|
16031 </Iteration>
|
jpayne@1
|
16032 <Iteration>
|
jpayne@1
|
16033 <Iteration_iter-num>310</Iteration_iter-num>
|
jpayne@1
|
16034 <Iteration_query-ID>Query_310</Iteration_query-ID>
|
jpayne@1
|
16035 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGN01000056_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16036 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16037 <Iteration_hits>
|
jpayne@1
|
16038 <Hit>
|
jpayne@1
|
16039 <Hit_num>1</Hit_num>
|
jpayne@1
|
16040 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16041 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16042 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16043 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16044 <Hit_hsps>
|
jpayne@1
|
16045 <Hsp>
|
jpayne@1
|
16046 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16047 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16048 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16049 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16050 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16051 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16052 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16053 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16054 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16055 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16056 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16057 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16058 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16059 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16060 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16061 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16062 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16063 </Hsp>
|
jpayne@1
|
16064 </Hit_hsps>
|
jpayne@1
|
16065 </Hit>
|
jpayne@1
|
16066 </Iteration_hits>
|
jpayne@1
|
16067 <Iteration_stat>
|
jpayne@1
|
16068 <Statistics>
|
jpayne@1
|
16069 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16070 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16071 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16072 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16073 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16074 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16075 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16076 </Statistics>
|
jpayne@1
|
16077 </Iteration_stat>
|
jpayne@1
|
16078 </Iteration>
|
jpayne@1
|
16079 <Iteration>
|
jpayne@1
|
16080 <Iteration_iter-num>311</Iteration_iter-num>
|
jpayne@1
|
16081 <Iteration_query-ID>Query_311</Iteration_query-ID>
|
jpayne@1
|
16082 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGP01000035_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16083 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16084 <Iteration_hits>
|
jpayne@1
|
16085 <Hit>
|
jpayne@1
|
16086 <Hit_num>1</Hit_num>
|
jpayne@1
|
16087 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16088 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16089 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16090 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16091 <Hit_hsps>
|
jpayne@1
|
16092 <Hsp>
|
jpayne@1
|
16093 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16094 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16095 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16096 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16097 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16098 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16099 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16100 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16101 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16102 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16103 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16104 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16105 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16106 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16107 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16108 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16109 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16110 </Hsp>
|
jpayne@1
|
16111 </Hit_hsps>
|
jpayne@1
|
16112 </Hit>
|
jpayne@1
|
16113 </Iteration_hits>
|
jpayne@1
|
16114 <Iteration_stat>
|
jpayne@1
|
16115 <Statistics>
|
jpayne@1
|
16116 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16117 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16118 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16119 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16120 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16121 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16122 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16123 </Statistics>
|
jpayne@1
|
16124 </Iteration_stat>
|
jpayne@1
|
16125 </Iteration>
|
jpayne@1
|
16126 <Iteration>
|
jpayne@1
|
16127 <Iteration_iter-num>312</Iteration_iter-num>
|
jpayne@1
|
16128 <Iteration_query-ID>Query_312</Iteration_query-ID>
|
jpayne@1
|
16129 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALIC01000030_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16130 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16131 <Iteration_hits>
|
jpayne@1
|
16132 <Hit>
|
jpayne@1
|
16133 <Hit_num>1</Hit_num>
|
jpayne@1
|
16134 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16135 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16136 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16137 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16138 <Hit_hsps>
|
jpayne@1
|
16139 <Hsp>
|
jpayne@1
|
16140 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16141 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16142 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16143 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16144 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16145 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16146 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16147 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16148 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16149 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16150 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16151 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16152 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16153 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16154 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16155 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16156 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16157 </Hsp>
|
jpayne@1
|
16158 </Hit_hsps>
|
jpayne@1
|
16159 </Hit>
|
jpayne@1
|
16160 </Iteration_hits>
|
jpayne@1
|
16161 <Iteration_stat>
|
jpayne@1
|
16162 <Statistics>
|
jpayne@1
|
16163 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16164 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16165 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16166 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16167 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16168 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16169 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16170 </Statistics>
|
jpayne@1
|
16171 </Iteration_stat>
|
jpayne@1
|
16172 </Iteration>
|
jpayne@1
|
16173 <Iteration>
|
jpayne@1
|
16174 <Iteration_iter-num>313</Iteration_iter-num>
|
jpayne@1
|
16175 <Iteration_query-ID>Query_313</Iteration_query-ID>
|
jpayne@1
|
16176 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEI01000031_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16177 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16178 <Iteration_hits>
|
jpayne@1
|
16179 <Hit>
|
jpayne@1
|
16180 <Hit_num>1</Hit_num>
|
jpayne@1
|
16181 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16182 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16183 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16184 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16185 <Hit_hsps>
|
jpayne@1
|
16186 <Hsp>
|
jpayne@1
|
16187 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16188 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16189 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16190 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16191 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16192 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16193 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16194 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16195 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16196 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16197 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16198 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16199 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16200 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16201 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16202 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16203 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16204 </Hsp>
|
jpayne@1
|
16205 </Hit_hsps>
|
jpayne@1
|
16206 </Hit>
|
jpayne@1
|
16207 </Iteration_hits>
|
jpayne@1
|
16208 <Iteration_stat>
|
jpayne@1
|
16209 <Statistics>
|
jpayne@1
|
16210 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16211 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16212 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16213 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16214 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16215 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16216 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16217 </Statistics>
|
jpayne@1
|
16218 </Iteration_stat>
|
jpayne@1
|
16219 </Iteration>
|
jpayne@1
|
16220 <Iteration>
|
jpayne@1
|
16221 <Iteration_iter-num>314</Iteration_iter-num>
|
jpayne@1
|
16222 <Iteration_query-ID>Query_314</Iteration_query-ID>
|
jpayne@1
|
16223 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGQ01000046_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16224 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16225 <Iteration_hits>
|
jpayne@1
|
16226 <Hit>
|
jpayne@1
|
16227 <Hit_num>1</Hit_num>
|
jpayne@1
|
16228 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16229 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16230 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16231 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16232 <Hit_hsps>
|
jpayne@1
|
16233 <Hsp>
|
jpayne@1
|
16234 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16235 <Hsp_bit-score>2577.2</Hsp_bit-score>
|
jpayne@1
|
16236 <Hsp_score>1395</Hsp_score>
|
jpayne@1
|
16237 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16238 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16239 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16240 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16241 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16242 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16243 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16244 <Hsp_identity>1469</Hsp_identity>
|
jpayne@1
|
16245 <Hsp_positive>1469</Hsp_positive>
|
jpayne@1
|
16246 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16247 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16248 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGTTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACGATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16249 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16250 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||| | |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| ||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16251 </Hsp>
|
jpayne@1
|
16252 </Hit_hsps>
|
jpayne@1
|
16253 </Hit>
|
jpayne@1
|
16254 </Iteration_hits>
|
jpayne@1
|
16255 <Iteration_stat>
|
jpayne@1
|
16256 <Statistics>
|
jpayne@1
|
16257 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16258 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16259 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16260 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16261 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16262 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16263 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16264 </Statistics>
|
jpayne@1
|
16265 </Iteration_stat>
|
jpayne@1
|
16266 </Iteration>
|
jpayne@1
|
16267 <Iteration>
|
jpayne@1
|
16268 <Iteration_iter-num>315</Iteration_iter-num>
|
jpayne@1
|
16269 <Iteration_query-ID>Query_315</Iteration_query-ID>
|
jpayne@1
|
16270 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEQ01000015_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16271 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16272 <Iteration_hits>
|
jpayne@1
|
16273 <Hit>
|
jpayne@1
|
16274 <Hit_num>1</Hit_num>
|
jpayne@1
|
16275 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16276 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16277 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16278 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16279 <Hit_hsps>
|
jpayne@1
|
16280 <Hsp>
|
jpayne@1
|
16281 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16282 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16283 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16284 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16285 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16286 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16287 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16288 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16289 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16290 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16291 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16292 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16293 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16294 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16295 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16296 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16297 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16298 </Hsp>
|
jpayne@1
|
16299 </Hit_hsps>
|
jpayne@1
|
16300 </Hit>
|
jpayne@1
|
16301 </Iteration_hits>
|
jpayne@1
|
16302 <Iteration_stat>
|
jpayne@1
|
16303 <Statistics>
|
jpayne@1
|
16304 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16305 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16306 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16307 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16308 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16309 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16310 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16311 </Statistics>
|
jpayne@1
|
16312 </Iteration_stat>
|
jpayne@1
|
16313 </Iteration>
|
jpayne@1
|
16314 <Iteration>
|
jpayne@1
|
16315 <Iteration_iter-num>316</Iteration_iter-num>
|
jpayne@1
|
16316 <Iteration_query-ID>Query_316</Iteration_query-ID>
|
jpayne@1
|
16317 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALER01000047_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16318 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16319 <Iteration_hits>
|
jpayne@1
|
16320 <Hit>
|
jpayne@1
|
16321 <Hit_num>1</Hit_num>
|
jpayne@1
|
16322 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16323 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16324 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16325 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16326 <Hit_hsps>
|
jpayne@1
|
16327 <Hsp>
|
jpayne@1
|
16328 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16329 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16330 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16331 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16332 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16333 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16334 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16335 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16336 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16337 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16338 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16339 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16340 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16341 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16342 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16343 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16344 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16345 </Hsp>
|
jpayne@1
|
16346 </Hit_hsps>
|
jpayne@1
|
16347 </Hit>
|
jpayne@1
|
16348 </Iteration_hits>
|
jpayne@1
|
16349 <Iteration_stat>
|
jpayne@1
|
16350 <Statistics>
|
jpayne@1
|
16351 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16352 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16353 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16354 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16355 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16356 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16357 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16358 </Statistics>
|
jpayne@1
|
16359 </Iteration_stat>
|
jpayne@1
|
16360 </Iteration>
|
jpayne@1
|
16361 <Iteration>
|
jpayne@1
|
16362 <Iteration_iter-num>317</Iteration_iter-num>
|
jpayne@1
|
16363 <Iteration_query-ID>Query_317</Iteration_query-ID>
|
jpayne@1
|
16364 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGL01000008_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16365 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16366 <Iteration_hits>
|
jpayne@1
|
16367 <Hit>
|
jpayne@1
|
16368 <Hit_num>1</Hit_num>
|
jpayne@1
|
16369 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16370 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16371 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16372 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16373 <Hit_hsps>
|
jpayne@1
|
16374 <Hsp>
|
jpayne@1
|
16375 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16376 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16377 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16378 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16379 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16380 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16381 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16382 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16383 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16384 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16385 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16386 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16387 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16388 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16389 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16390 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16391 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16392 </Hsp>
|
jpayne@1
|
16393 </Hit_hsps>
|
jpayne@1
|
16394 </Hit>
|
jpayne@1
|
16395 </Iteration_hits>
|
jpayne@1
|
16396 <Iteration_stat>
|
jpayne@1
|
16397 <Statistics>
|
jpayne@1
|
16398 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16399 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16400 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16401 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16402 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16403 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16404 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16405 </Statistics>
|
jpayne@1
|
16406 </Iteration_stat>
|
jpayne@1
|
16407 </Iteration>
|
jpayne@1
|
16408 <Iteration>
|
jpayne@1
|
16409 <Iteration_iter-num>318</Iteration_iter-num>
|
jpayne@1
|
16410 <Iteration_query-ID>Query_318</Iteration_query-ID>
|
jpayne@1
|
16411 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHA01000049_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16412 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16413 <Iteration_hits>
|
jpayne@1
|
16414 <Hit>
|
jpayne@1
|
16415 <Hit_num>1</Hit_num>
|
jpayne@1
|
16416 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16417 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16418 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16419 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16420 <Hit_hsps>
|
jpayne@1
|
16421 <Hsp>
|
jpayne@1
|
16422 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16423 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16424 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16425 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16426 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16427 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16428 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16429 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16430 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16431 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16432 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16433 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16434 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16435 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16436 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16437 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16438 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16439 </Hsp>
|
jpayne@1
|
16440 </Hit_hsps>
|
jpayne@1
|
16441 </Hit>
|
jpayne@1
|
16442 </Iteration_hits>
|
jpayne@1
|
16443 <Iteration_stat>
|
jpayne@1
|
16444 <Statistics>
|
jpayne@1
|
16445 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16446 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16447 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16448 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16449 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16450 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16451 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16452 </Statistics>
|
jpayne@1
|
16453 </Iteration_stat>
|
jpayne@1
|
16454 </Iteration>
|
jpayne@1
|
16455 <Iteration>
|
jpayne@1
|
16456 <Iteration_iter-num>319</Iteration_iter-num>
|
jpayne@1
|
16457 <Iteration_query-ID>Query_319</Iteration_query-ID>
|
jpayne@1
|
16458 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEJ01000019_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16459 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16460 <Iteration_hits>
|
jpayne@1
|
16461 <Hit>
|
jpayne@1
|
16462 <Hit_num>1</Hit_num>
|
jpayne@1
|
16463 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16464 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16465 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16466 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16467 <Hit_hsps>
|
jpayne@1
|
16468 <Hsp>
|
jpayne@1
|
16469 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16470 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16471 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16472 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16473 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16474 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16475 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16476 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16477 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16478 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16479 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16480 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16481 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16482 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16483 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16484 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16485 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16486 </Hsp>
|
jpayne@1
|
16487 </Hit_hsps>
|
jpayne@1
|
16488 </Hit>
|
jpayne@1
|
16489 </Iteration_hits>
|
jpayne@1
|
16490 <Iteration_stat>
|
jpayne@1
|
16491 <Statistics>
|
jpayne@1
|
16492 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16493 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16494 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16495 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16496 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16497 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16498 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16499 </Statistics>
|
jpayne@1
|
16500 </Iteration_stat>
|
jpayne@1
|
16501 </Iteration>
|
jpayne@1
|
16502 <Iteration>
|
jpayne@1
|
16503 <Iteration_iter-num>320</Iteration_iter-num>
|
jpayne@1
|
16504 <Iteration_query-ID>Query_320</Iteration_query-ID>
|
jpayne@1
|
16505 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALES01000018_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16506 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16507 <Iteration_hits>
|
jpayne@1
|
16508 <Hit>
|
jpayne@1
|
16509 <Hit_num>1</Hit_num>
|
jpayne@1
|
16510 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16511 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16512 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16513 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16514 <Hit_hsps>
|
jpayne@1
|
16515 <Hsp>
|
jpayne@1
|
16516 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16517 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16518 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16519 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16520 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16521 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16522 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16523 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16524 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16525 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16526 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16527 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16528 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16529 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16530 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16531 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16532 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16533 </Hsp>
|
jpayne@1
|
16534 </Hit_hsps>
|
jpayne@1
|
16535 </Hit>
|
jpayne@1
|
16536 </Iteration_hits>
|
jpayne@1
|
16537 <Iteration_stat>
|
jpayne@1
|
16538 <Statistics>
|
jpayne@1
|
16539 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16540 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16541 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16542 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16543 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16544 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16545 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16546 </Statistics>
|
jpayne@1
|
16547 </Iteration_stat>
|
jpayne@1
|
16548 </Iteration>
|
jpayne@1
|
16549 <Iteration>
|
jpayne@1
|
16550 <Iteration_iter-num>321</Iteration_iter-num>
|
jpayne@1
|
16551 <Iteration_query-ID>Query_321</Iteration_query-ID>
|
jpayne@1
|
16552 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALET01000040_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16553 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16554 <Iteration_hits>
|
jpayne@1
|
16555 <Hit>
|
jpayne@1
|
16556 <Hit_num>1</Hit_num>
|
jpayne@1
|
16557 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16558 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16559 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16560 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16561 <Hit_hsps>
|
jpayne@1
|
16562 <Hsp>
|
jpayne@1
|
16563 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16564 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16565 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16566 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16567 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16568 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16569 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16570 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16571 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16572 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16573 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16574 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16575 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16576 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16577 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16578 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16579 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16580 </Hsp>
|
jpayne@1
|
16581 </Hit_hsps>
|
jpayne@1
|
16582 </Hit>
|
jpayne@1
|
16583 </Iteration_hits>
|
jpayne@1
|
16584 <Iteration_stat>
|
jpayne@1
|
16585 <Statistics>
|
jpayne@1
|
16586 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16587 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16588 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16589 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16590 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16591 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16592 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16593 </Statistics>
|
jpayne@1
|
16594 </Iteration_stat>
|
jpayne@1
|
16595 </Iteration>
|
jpayne@1
|
16596 <Iteration>
|
jpayne@1
|
16597 <Iteration_iter-num>322</Iteration_iter-num>
|
jpayne@1
|
16598 <Iteration_query-ID>Query_322</Iteration_query-ID>
|
jpayne@1
|
16599 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEK01000025_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16600 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16601 <Iteration_hits>
|
jpayne@1
|
16602 <Hit>
|
jpayne@1
|
16603 <Hit_num>1</Hit_num>
|
jpayne@1
|
16604 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16605 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16606 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16607 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16608 <Hit_hsps>
|
jpayne@1
|
16609 <Hsp>
|
jpayne@1
|
16610 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16611 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16612 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16613 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16614 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16615 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16616 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16617 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16618 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16619 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16620 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16621 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16622 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16623 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16624 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16625 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16626 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16627 </Hsp>
|
jpayne@1
|
16628 </Hit_hsps>
|
jpayne@1
|
16629 </Hit>
|
jpayne@1
|
16630 </Iteration_hits>
|
jpayne@1
|
16631 <Iteration_stat>
|
jpayne@1
|
16632 <Statistics>
|
jpayne@1
|
16633 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16634 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16635 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16636 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16637 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16638 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16639 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16640 </Statistics>
|
jpayne@1
|
16641 </Iteration_stat>
|
jpayne@1
|
16642 </Iteration>
|
jpayne@1
|
16643 <Iteration>
|
jpayne@1
|
16644 <Iteration_iter-num>323</Iteration_iter-num>
|
jpayne@1
|
16645 <Iteration_query-ID>Query_323</Iteration_query-ID>
|
jpayne@1
|
16646 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHH01000044_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16647 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16648 <Iteration_hits>
|
jpayne@1
|
16649 <Hit>
|
jpayne@1
|
16650 <Hit_num>1</Hit_num>
|
jpayne@1
|
16651 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16652 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16653 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16654 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16655 <Hit_hsps>
|
jpayne@1
|
16656 <Hsp>
|
jpayne@1
|
16657 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16658 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16659 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16660 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16661 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16662 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16663 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16664 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16665 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16666 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16667 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16668 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16669 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16670 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16671 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16672 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16673 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16674 </Hsp>
|
jpayne@1
|
16675 </Hit_hsps>
|
jpayne@1
|
16676 </Hit>
|
jpayne@1
|
16677 </Iteration_hits>
|
jpayne@1
|
16678 <Iteration_stat>
|
jpayne@1
|
16679 <Statistics>
|
jpayne@1
|
16680 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16681 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16682 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16683 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16684 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16685 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16686 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16687 </Statistics>
|
jpayne@1
|
16688 </Iteration_stat>
|
jpayne@1
|
16689 </Iteration>
|
jpayne@1
|
16690 <Iteration>
|
jpayne@1
|
16691 <Iteration_iter-num>324</Iteration_iter-num>
|
jpayne@1
|
16692 <Iteration_query-ID>Query_324</Iteration_query-ID>
|
jpayne@1
|
16693 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHS01000129_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16694 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16695 <Iteration_hits>
|
jpayne@1
|
16696 <Hit>
|
jpayne@1
|
16697 <Hit_num>1</Hit_num>
|
jpayne@1
|
16698 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16699 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16700 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16701 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16702 <Hit_hsps>
|
jpayne@1
|
16703 <Hsp>
|
jpayne@1
|
16704 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16705 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16706 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16707 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16708 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16709 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16710 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16711 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16712 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16713 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16714 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16715 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16716 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16717 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16718 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16719 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16720 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16721 </Hsp>
|
jpayne@1
|
16722 </Hit_hsps>
|
jpayne@1
|
16723 </Hit>
|
jpayne@1
|
16724 </Iteration_hits>
|
jpayne@1
|
16725 <Iteration_stat>
|
jpayne@1
|
16726 <Statistics>
|
jpayne@1
|
16727 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16728 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16729 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16730 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16731 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16732 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16733 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16734 </Statistics>
|
jpayne@1
|
16735 </Iteration_stat>
|
jpayne@1
|
16736 </Iteration>
|
jpayne@1
|
16737 <Iteration>
|
jpayne@1
|
16738 <Iteration_iter-num>325</Iteration_iter-num>
|
jpayne@1
|
16739 <Iteration_query-ID>Query_325</Iteration_query-ID>
|
jpayne@1
|
16740 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHI01000004_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16741 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16742 <Iteration_hits>
|
jpayne@1
|
16743 <Hit>
|
jpayne@1
|
16744 <Hit_num>1</Hit_num>
|
jpayne@1
|
16745 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16746 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16747 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16748 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16749 <Hit_hsps>
|
jpayne@1
|
16750 <Hsp>
|
jpayne@1
|
16751 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16752 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16753 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16754 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16755 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16756 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16757 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16758 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16759 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16760 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16761 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16762 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16763 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16764 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16765 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16766 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16767 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16768 </Hsp>
|
jpayne@1
|
16769 </Hit_hsps>
|
jpayne@1
|
16770 </Hit>
|
jpayne@1
|
16771 </Iteration_hits>
|
jpayne@1
|
16772 <Iteration_stat>
|
jpayne@1
|
16773 <Statistics>
|
jpayne@1
|
16774 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16775 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16776 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16777 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16778 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16779 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16780 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16781 </Statistics>
|
jpayne@1
|
16782 </Iteration_stat>
|
jpayne@1
|
16783 </Iteration>
|
jpayne@1
|
16784 <Iteration>
|
jpayne@1
|
16785 <Iteration_iter-num>326</Iteration_iter-num>
|
jpayne@1
|
16786 <Iteration_query-ID>Query_326</Iteration_query-ID>
|
jpayne@1
|
16787 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHJ01000044_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16788 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16789 <Iteration_hits>
|
jpayne@1
|
16790 <Hit>
|
jpayne@1
|
16791 <Hit_num>1</Hit_num>
|
jpayne@1
|
16792 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16793 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16794 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16795 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16796 <Hit_hsps>
|
jpayne@1
|
16797 <Hsp>
|
jpayne@1
|
16798 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16799 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16800 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16801 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16802 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16803 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16804 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16805 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16806 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16807 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16808 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16809 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16810 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16811 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16812 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16813 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16814 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16815 </Hsp>
|
jpayne@1
|
16816 </Hit_hsps>
|
jpayne@1
|
16817 </Hit>
|
jpayne@1
|
16818 </Iteration_hits>
|
jpayne@1
|
16819 <Iteration_stat>
|
jpayne@1
|
16820 <Statistics>
|
jpayne@1
|
16821 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16822 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16823 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16824 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16825 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16826 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16827 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16828 </Statistics>
|
jpayne@1
|
16829 </Iteration_stat>
|
jpayne@1
|
16830 </Iteration>
|
jpayne@1
|
16831 <Iteration>
|
jpayne@1
|
16832 <Iteration_iter-num>327</Iteration_iter-num>
|
jpayne@1
|
16833 <Iteration_query-ID>Query_327</Iteration_query-ID>
|
jpayne@1
|
16834 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHK01000130_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16835 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16836 <Iteration_hits>
|
jpayne@1
|
16837 <Hit>
|
jpayne@1
|
16838 <Hit_num>1</Hit_num>
|
jpayne@1
|
16839 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16840 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16841 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16842 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16843 <Hit_hsps>
|
jpayne@1
|
16844 <Hsp>
|
jpayne@1
|
16845 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16846 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16847 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16848 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16849 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16850 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16851 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16852 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16853 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16854 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16855 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16856 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16857 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16858 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16859 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16860 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16861 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16862 </Hsp>
|
jpayne@1
|
16863 </Hit_hsps>
|
jpayne@1
|
16864 </Hit>
|
jpayne@1
|
16865 </Iteration_hits>
|
jpayne@1
|
16866 <Iteration_stat>
|
jpayne@1
|
16867 <Statistics>
|
jpayne@1
|
16868 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16869 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16870 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16871 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16872 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16873 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16874 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16875 </Statistics>
|
jpayne@1
|
16876 </Iteration_stat>
|
jpayne@1
|
16877 </Iteration>
|
jpayne@1
|
16878 <Iteration>
|
jpayne@1
|
16879 <Iteration_iter-num>328</Iteration_iter-num>
|
jpayne@1
|
16880 <Iteration_query-ID>Query_328</Iteration_query-ID>
|
jpayne@1
|
16881 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHL01000012_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16882 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16883 <Iteration_hits>
|
jpayne@1
|
16884 <Hit>
|
jpayne@1
|
16885 <Hit_num>1</Hit_num>
|
jpayne@1
|
16886 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16887 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16888 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16889 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16890 <Hit_hsps>
|
jpayne@1
|
16891 <Hsp>
|
jpayne@1
|
16892 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16893 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16894 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16895 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16896 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16897 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16898 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16899 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16900 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16901 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16902 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16903 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16904 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16905 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16906 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16907 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16908 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16909 </Hsp>
|
jpayne@1
|
16910 </Hit_hsps>
|
jpayne@1
|
16911 </Hit>
|
jpayne@1
|
16912 </Iteration_hits>
|
jpayne@1
|
16913 <Iteration_stat>
|
jpayne@1
|
16914 <Statistics>
|
jpayne@1
|
16915 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16916 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16917 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16918 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16919 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16920 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16921 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16922 </Statistics>
|
jpayne@1
|
16923 </Iteration_stat>
|
jpayne@1
|
16924 </Iteration>
|
jpayne@1
|
16925 <Iteration>
|
jpayne@1
|
16926 <Iteration_iter-num>329</Iteration_iter-num>
|
jpayne@1
|
16927 <Iteration_query-ID>Query_329</Iteration_query-ID>
|
jpayne@1
|
16928 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHM01000048_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16929 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16930 <Iteration_hits>
|
jpayne@1
|
16931 <Hit>
|
jpayne@1
|
16932 <Hit_num>1</Hit_num>
|
jpayne@1
|
16933 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16934 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16935 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16936 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16937 <Hit_hsps>
|
jpayne@1
|
16938 <Hsp>
|
jpayne@1
|
16939 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16940 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16941 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16942 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16943 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16944 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16945 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16946 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16947 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16948 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16949 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16950 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16951 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16952 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
16953 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
16954 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
16955 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
16956 </Hsp>
|
jpayne@1
|
16957 </Hit_hsps>
|
jpayne@1
|
16958 </Hit>
|
jpayne@1
|
16959 </Iteration_hits>
|
jpayne@1
|
16960 <Iteration_stat>
|
jpayne@1
|
16961 <Statistics>
|
jpayne@1
|
16962 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
16963 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
16964 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
16965 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
16966 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
16967 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
16968 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
16969 </Statistics>
|
jpayne@1
|
16970 </Iteration_stat>
|
jpayne@1
|
16971 </Iteration>
|
jpayne@1
|
16972 <Iteration>
|
jpayne@1
|
16973 <Iteration_iter-num>330</Iteration_iter-num>
|
jpayne@1
|
16974 <Iteration_query-ID>Query_330</Iteration_query-ID>
|
jpayne@1
|
16975 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHV01000088_g,m__1506</Iteration_query-def>
|
jpayne@1
|
16976 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
16977 <Iteration_hits>
|
jpayne@1
|
16978 <Hit>
|
jpayne@1
|
16979 <Hit_num>1</Hit_num>
|
jpayne@1
|
16980 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
16981 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
16982 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
16983 <Hit_len>1962</Hit_len>
|
jpayne@1
|
16984 <Hit_hsps>
|
jpayne@1
|
16985 <Hsp>
|
jpayne@1
|
16986 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
16987 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
16988 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
16989 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
16990 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
16991 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
16992 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
16993 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
16994 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
16995 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
16996 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
16997 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
16998 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
16999 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17000 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17001 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17002 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17003 </Hsp>
|
jpayne@1
|
17004 </Hit_hsps>
|
jpayne@1
|
17005 </Hit>
|
jpayne@1
|
17006 </Iteration_hits>
|
jpayne@1
|
17007 <Iteration_stat>
|
jpayne@1
|
17008 <Statistics>
|
jpayne@1
|
17009 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17010 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17011 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17012 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17013 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17014 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17015 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17016 </Statistics>
|
jpayne@1
|
17017 </Iteration_stat>
|
jpayne@1
|
17018 </Iteration>
|
jpayne@1
|
17019 <Iteration>
|
jpayne@1
|
17020 <Iteration_iter-num>331</Iteration_iter-num>
|
jpayne@1
|
17021 <Iteration_query-ID>Query_331</Iteration_query-ID>
|
jpayne@1
|
17022 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHN01000008_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17023 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17024 <Iteration_hits>
|
jpayne@1
|
17025 <Hit>
|
jpayne@1
|
17026 <Hit_num>1</Hit_num>
|
jpayne@1
|
17027 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17028 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17029 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17030 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17031 <Hit_hsps>
|
jpayne@1
|
17032 <Hsp>
|
jpayne@1
|
17033 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17034 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17035 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17036 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17037 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17038 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17039 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17040 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17041 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17042 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17043 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17044 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17045 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17046 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17047 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17048 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17049 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17050 </Hsp>
|
jpayne@1
|
17051 </Hit_hsps>
|
jpayne@1
|
17052 </Hit>
|
jpayne@1
|
17053 </Iteration_hits>
|
jpayne@1
|
17054 <Iteration_stat>
|
jpayne@1
|
17055 <Statistics>
|
jpayne@1
|
17056 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17057 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17058 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17059 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17060 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17061 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17062 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17063 </Statistics>
|
jpayne@1
|
17064 </Iteration_stat>
|
jpayne@1
|
17065 </Iteration>
|
jpayne@1
|
17066 <Iteration>
|
jpayne@1
|
17067 <Iteration_iter-num>332</Iteration_iter-num>
|
jpayne@1
|
17068 <Iteration_query-ID>Query_332</Iteration_query-ID>
|
jpayne@1
|
17069 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFA01000041_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17070 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17071 <Iteration_hits>
|
jpayne@1
|
17072 <Hit>
|
jpayne@1
|
17073 <Hit_num>1</Hit_num>
|
jpayne@1
|
17074 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17075 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17076 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17077 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17078 <Hit_hsps>
|
jpayne@1
|
17079 <Hsp>
|
jpayne@1
|
17080 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17081 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17082 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17083 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17084 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17085 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17086 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17087 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17088 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17089 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17090 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17091 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17092 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17093 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17094 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17095 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17096 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17097 </Hsp>
|
jpayne@1
|
17098 </Hit_hsps>
|
jpayne@1
|
17099 </Hit>
|
jpayne@1
|
17100 </Iteration_hits>
|
jpayne@1
|
17101 <Iteration_stat>
|
jpayne@1
|
17102 <Statistics>
|
jpayne@1
|
17103 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17104 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17105 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17106 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17107 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17108 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17109 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17110 </Statistics>
|
jpayne@1
|
17111 </Iteration_stat>
|
jpayne@1
|
17112 </Iteration>
|
jpayne@1
|
17113 <Iteration>
|
jpayne@1
|
17114 <Iteration_iter-num>333</Iteration_iter-num>
|
jpayne@1
|
17115 <Iteration_query-ID>Query_333</Iteration_query-ID>
|
jpayne@1
|
17116 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHO01000019_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17117 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17118 <Iteration_hits>
|
jpayne@1
|
17119 <Hit>
|
jpayne@1
|
17120 <Hit_num>1</Hit_num>
|
jpayne@1
|
17121 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17122 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17123 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17124 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17125 <Hit_hsps>
|
jpayne@1
|
17126 <Hsp>
|
jpayne@1
|
17127 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17128 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17129 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17130 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17131 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17132 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17133 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17134 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17135 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17136 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17137 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17138 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17139 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17140 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17141 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17142 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17143 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17144 </Hsp>
|
jpayne@1
|
17145 </Hit_hsps>
|
jpayne@1
|
17146 </Hit>
|
jpayne@1
|
17147 </Iteration_hits>
|
jpayne@1
|
17148 <Iteration_stat>
|
jpayne@1
|
17149 <Statistics>
|
jpayne@1
|
17150 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17151 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17152 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17153 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17154 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17155 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17156 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17157 </Statistics>
|
jpayne@1
|
17158 </Iteration_stat>
|
jpayne@1
|
17159 </Iteration>
|
jpayne@1
|
17160 <Iteration>
|
jpayne@1
|
17161 <Iteration_iter-num>334</Iteration_iter-num>
|
jpayne@1
|
17162 <Iteration_query-ID>Query_334</Iteration_query-ID>
|
jpayne@1
|
17163 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHP01000034_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17164 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17165 <Iteration_hits>
|
jpayne@1
|
17166 <Hit>
|
jpayne@1
|
17167 <Hit_num>1</Hit_num>
|
jpayne@1
|
17168 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17169 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17170 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17171 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17172 <Hit_hsps>
|
jpayne@1
|
17173 <Hsp>
|
jpayne@1
|
17174 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17175 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17176 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17177 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17178 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17179 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17180 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17181 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17182 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17183 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17184 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17185 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17186 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17187 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17188 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17189 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17190 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17191 </Hsp>
|
jpayne@1
|
17192 </Hit_hsps>
|
jpayne@1
|
17193 </Hit>
|
jpayne@1
|
17194 </Iteration_hits>
|
jpayne@1
|
17195 <Iteration_stat>
|
jpayne@1
|
17196 <Statistics>
|
jpayne@1
|
17197 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17198 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17199 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17200 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17201 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17202 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17203 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17204 </Statistics>
|
jpayne@1
|
17205 </Iteration_stat>
|
jpayne@1
|
17206 </Iteration>
|
jpayne@1
|
17207 <Iteration>
|
jpayne@1
|
17208 <Iteration_iter-num>335</Iteration_iter-num>
|
jpayne@1
|
17209 <Iteration_query-ID>Query_335</Iteration_query-ID>
|
jpayne@1
|
17210 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHQ01000183_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17211 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17212 <Iteration_hits>
|
jpayne@1
|
17213 <Hit>
|
jpayne@1
|
17214 <Hit_num>1</Hit_num>
|
jpayne@1
|
17215 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17216 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17217 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17218 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17219 <Hit_hsps>
|
jpayne@1
|
17220 <Hsp>
|
jpayne@1
|
17221 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17222 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17223 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17224 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17225 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17226 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17227 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17228 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17229 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17230 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17231 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17232 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17233 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17234 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17235 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17236 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17237 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17238 </Hsp>
|
jpayne@1
|
17239 </Hit_hsps>
|
jpayne@1
|
17240 </Hit>
|
jpayne@1
|
17241 </Iteration_hits>
|
jpayne@1
|
17242 <Iteration_stat>
|
jpayne@1
|
17243 <Statistics>
|
jpayne@1
|
17244 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17245 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17246 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17247 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17248 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17249 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17250 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17251 </Statistics>
|
jpayne@1
|
17252 </Iteration_stat>
|
jpayne@1
|
17253 </Iteration>
|
jpayne@1
|
17254 <Iteration>
|
jpayne@1
|
17255 <Iteration_iter-num>336</Iteration_iter-num>
|
jpayne@1
|
17256 <Iteration_query-ID>Query_336</Iteration_query-ID>
|
jpayne@1
|
17257 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEZ01000038_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17258 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17259 <Iteration_hits>
|
jpayne@1
|
17260 <Hit>
|
jpayne@1
|
17261 <Hit_num>1</Hit_num>
|
jpayne@1
|
17262 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17263 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17264 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17265 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17266 <Hit_hsps>
|
jpayne@1
|
17267 <Hsp>
|
jpayne@1
|
17268 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17269 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17270 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17271 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17272 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17273 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17274 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17275 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17276 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17277 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17278 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17279 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17280 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17281 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17282 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17283 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17284 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17285 </Hsp>
|
jpayne@1
|
17286 </Hit_hsps>
|
jpayne@1
|
17287 </Hit>
|
jpayne@1
|
17288 </Iteration_hits>
|
jpayne@1
|
17289 <Iteration_stat>
|
jpayne@1
|
17290 <Statistics>
|
jpayne@1
|
17291 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17292 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17293 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17294 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17295 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17296 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17297 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17298 </Statistics>
|
jpayne@1
|
17299 </Iteration_stat>
|
jpayne@1
|
17300 </Iteration>
|
jpayne@1
|
17301 <Iteration>
|
jpayne@1
|
17302 <Iteration_iter-num>337</Iteration_iter-num>
|
jpayne@1
|
17303 <Iteration_query-ID>Query_337</Iteration_query-ID>
|
jpayne@1
|
17304 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHR01000025_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17305 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17306 <Iteration_hits>
|
jpayne@1
|
17307 <Hit>
|
jpayne@1
|
17308 <Hit_num>1</Hit_num>
|
jpayne@1
|
17309 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17310 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17311 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17312 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17313 <Hit_hsps>
|
jpayne@1
|
17314 <Hsp>
|
jpayne@1
|
17315 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17316 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17317 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17318 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17319 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17320 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17321 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17322 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17323 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17324 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17325 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17326 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17327 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17328 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17329 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17330 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17331 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17332 </Hsp>
|
jpayne@1
|
17333 </Hit_hsps>
|
jpayne@1
|
17334 </Hit>
|
jpayne@1
|
17335 </Iteration_hits>
|
jpayne@1
|
17336 <Iteration_stat>
|
jpayne@1
|
17337 <Statistics>
|
jpayne@1
|
17338 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17339 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17340 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17341 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17342 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17343 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17344 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17345 </Statistics>
|
jpayne@1
|
17346 </Iteration_stat>
|
jpayne@1
|
17347 </Iteration>
|
jpayne@1
|
17348 <Iteration>
|
jpayne@1
|
17349 <Iteration_iter-num>338</Iteration_iter-num>
|
jpayne@1
|
17350 <Iteration_query-ID>Query_338</Iteration_query-ID>
|
jpayne@1
|
17351 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHW01000046_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17352 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17353 <Iteration_hits>
|
jpayne@1
|
17354 <Hit>
|
jpayne@1
|
17355 <Hit_num>1</Hit_num>
|
jpayne@1
|
17356 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17357 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17358 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17359 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17360 <Hit_hsps>
|
jpayne@1
|
17361 <Hsp>
|
jpayne@1
|
17362 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17363 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17364 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17365 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17366 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17367 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17368 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17369 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17370 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17371 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17372 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17373 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17374 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17375 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17376 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17377 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17378 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17379 </Hsp>
|
jpayne@1
|
17380 </Hit_hsps>
|
jpayne@1
|
17381 </Hit>
|
jpayne@1
|
17382 </Iteration_hits>
|
jpayne@1
|
17383 <Iteration_stat>
|
jpayne@1
|
17384 <Statistics>
|
jpayne@1
|
17385 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17386 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17387 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17388 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17389 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17390 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17391 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17392 </Statistics>
|
jpayne@1
|
17393 </Iteration_stat>
|
jpayne@1
|
17394 </Iteration>
|
jpayne@1
|
17395 <Iteration>
|
jpayne@1
|
17396 <Iteration_iter-num>339</Iteration_iter-num>
|
jpayne@1
|
17397 <Iteration_query-ID>Query_339</Iteration_query-ID>
|
jpayne@1
|
17398 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEL01000037_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17399 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17400 <Iteration_hits>
|
jpayne@1
|
17401 <Hit>
|
jpayne@1
|
17402 <Hit_num>1</Hit_num>
|
jpayne@1
|
17403 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17404 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17405 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17406 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17407 <Hit_hsps>
|
jpayne@1
|
17408 <Hsp>
|
jpayne@1
|
17409 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17410 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17411 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17412 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17413 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17414 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17415 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17416 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17417 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17418 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17419 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17420 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17421 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17422 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17423 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17424 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17425 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17426 </Hsp>
|
jpayne@1
|
17427 </Hit_hsps>
|
jpayne@1
|
17428 </Hit>
|
jpayne@1
|
17429 </Iteration_hits>
|
jpayne@1
|
17430 <Iteration_stat>
|
jpayne@1
|
17431 <Statistics>
|
jpayne@1
|
17432 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17433 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17434 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17435 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17436 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17437 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17438 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17439 </Statistics>
|
jpayne@1
|
17440 </Iteration_stat>
|
jpayne@1
|
17441 </Iteration>
|
jpayne@1
|
17442 <Iteration>
|
jpayne@1
|
17443 <Iteration_iter-num>340</Iteration_iter-num>
|
jpayne@1
|
17444 <Iteration_query-ID>Query_340</Iteration_query-ID>
|
jpayne@1
|
17445 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEU01000024_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17446 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17447 <Iteration_hits>
|
jpayne@1
|
17448 <Hit>
|
jpayne@1
|
17449 <Hit_num>1</Hit_num>
|
jpayne@1
|
17450 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17451 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17452 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17453 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17454 <Hit_hsps>
|
jpayne@1
|
17455 <Hsp>
|
jpayne@1
|
17456 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17457 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17458 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17459 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17460 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17461 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17462 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17463 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17464 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17465 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17466 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17467 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17468 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17469 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17470 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17471 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17472 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17473 </Hsp>
|
jpayne@1
|
17474 </Hit_hsps>
|
jpayne@1
|
17475 </Hit>
|
jpayne@1
|
17476 </Iteration_hits>
|
jpayne@1
|
17477 <Iteration_stat>
|
jpayne@1
|
17478 <Statistics>
|
jpayne@1
|
17479 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17480 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17481 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17482 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17483 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17484 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17485 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17486 </Statistics>
|
jpayne@1
|
17487 </Iteration_stat>
|
jpayne@1
|
17488 </Iteration>
|
jpayne@1
|
17489 <Iteration>
|
jpayne@1
|
17490 <Iteration_iter-num>341</Iteration_iter-num>
|
jpayne@1
|
17491 <Iteration_query-ID>Query_341</Iteration_query-ID>
|
jpayne@1
|
17492 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEV01000014_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17493 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17494 <Iteration_hits>
|
jpayne@1
|
17495 <Hit>
|
jpayne@1
|
17496 <Hit_num>1</Hit_num>
|
jpayne@1
|
17497 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17498 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17499 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17500 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17501 <Hit_hsps>
|
jpayne@1
|
17502 <Hsp>
|
jpayne@1
|
17503 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17504 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17505 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17506 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17507 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17508 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17509 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17510 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17511 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17512 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17513 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17514 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17515 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17516 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17517 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17518 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17519 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17520 </Hsp>
|
jpayne@1
|
17521 </Hit_hsps>
|
jpayne@1
|
17522 </Hit>
|
jpayne@1
|
17523 </Iteration_hits>
|
jpayne@1
|
17524 <Iteration_stat>
|
jpayne@1
|
17525 <Statistics>
|
jpayne@1
|
17526 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17527 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17528 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17529 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17530 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17531 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17532 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17533 </Statistics>
|
jpayne@1
|
17534 </Iteration_stat>
|
jpayne@1
|
17535 </Iteration>
|
jpayne@1
|
17536 <Iteration>
|
jpayne@1
|
17537 <Iteration_iter-num>342</Iteration_iter-num>
|
jpayne@1
|
17538 <Iteration_query-ID>Query_342</Iteration_query-ID>
|
jpayne@1
|
17539 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEW01000021_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17540 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17541 <Iteration_hits>
|
jpayne@1
|
17542 <Hit>
|
jpayne@1
|
17543 <Hit_num>1</Hit_num>
|
jpayne@1
|
17544 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17545 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17546 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17547 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17548 <Hit_hsps>
|
jpayne@1
|
17549 <Hsp>
|
jpayne@1
|
17550 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17551 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17552 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17553 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17554 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17555 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17556 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17557 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17558 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17559 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17560 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17561 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17562 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17563 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17564 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17565 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17566 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17567 </Hsp>
|
jpayne@1
|
17568 </Hit_hsps>
|
jpayne@1
|
17569 </Hit>
|
jpayne@1
|
17570 </Iteration_hits>
|
jpayne@1
|
17571 <Iteration_stat>
|
jpayne@1
|
17572 <Statistics>
|
jpayne@1
|
17573 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17574 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17575 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17576 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17577 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17578 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17579 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17580 </Statistics>
|
jpayne@1
|
17581 </Iteration_stat>
|
jpayne@1
|
17582 </Iteration>
|
jpayne@1
|
17583 <Iteration>
|
jpayne@1
|
17584 <Iteration_iter-num>343</Iteration_iter-num>
|
jpayne@1
|
17585 <Iteration_query-ID>Query_343</Iteration_query-ID>
|
jpayne@1
|
17586 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALIB01000065_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17587 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17588 <Iteration_hits>
|
jpayne@1
|
17589 <Hit>
|
jpayne@1
|
17590 <Hit_num>1</Hit_num>
|
jpayne@1
|
17591 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17592 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17593 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17594 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17595 <Hit_hsps>
|
jpayne@1
|
17596 <Hsp>
|
jpayne@1
|
17597 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17598 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17599 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17600 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17601 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17602 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17603 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17604 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17605 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17606 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17607 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17608 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17609 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17610 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17611 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17612 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17613 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17614 </Hsp>
|
jpayne@1
|
17615 </Hit_hsps>
|
jpayne@1
|
17616 </Hit>
|
jpayne@1
|
17617 </Iteration_hits>
|
jpayne@1
|
17618 <Iteration_stat>
|
jpayne@1
|
17619 <Statistics>
|
jpayne@1
|
17620 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17621 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17622 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17623 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17624 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17625 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17626 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17627 </Statistics>
|
jpayne@1
|
17628 </Iteration_stat>
|
jpayne@1
|
17629 </Iteration>
|
jpayne@1
|
17630 <Iteration>
|
jpayne@1
|
17631 <Iteration_iter-num>344</Iteration_iter-num>
|
jpayne@1
|
17632 <Iteration_query-ID>Query_344</Iteration_query-ID>
|
jpayne@1
|
17633 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALEY01000031_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17634 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17635 <Iteration_hits>
|
jpayne@1
|
17636 <Hit>
|
jpayne@1
|
17637 <Hit_num>1</Hit_num>
|
jpayne@1
|
17638 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17639 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17640 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17641 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17642 <Hit_hsps>
|
jpayne@1
|
17643 <Hsp>
|
jpayne@1
|
17644 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17645 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17646 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17647 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17648 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17649 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17650 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17651 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17652 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17653 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17654 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17655 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17656 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17657 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17658 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17659 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17660 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17661 </Hsp>
|
jpayne@1
|
17662 </Hit_hsps>
|
jpayne@1
|
17663 </Hit>
|
jpayne@1
|
17664 </Iteration_hits>
|
jpayne@1
|
17665 <Iteration_stat>
|
jpayne@1
|
17666 <Statistics>
|
jpayne@1
|
17667 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17668 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17669 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17670 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17671 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17672 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17673 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17674 </Statistics>
|
jpayne@1
|
17675 </Iteration_stat>
|
jpayne@1
|
17676 </Iteration>
|
jpayne@1
|
17677 <Iteration>
|
jpayne@1
|
17678 <Iteration_iter-num>345</Iteration_iter-num>
|
jpayne@1
|
17679 <Iteration_query-ID>Query_345</Iteration_query-ID>
|
jpayne@1
|
17680 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFS01000031_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17681 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17682 <Iteration_hits>
|
jpayne@1
|
17683 <Hit>
|
jpayne@1
|
17684 <Hit_num>1</Hit_num>
|
jpayne@1
|
17685 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17686 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17687 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17688 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17689 <Hit_hsps>
|
jpayne@1
|
17690 <Hsp>
|
jpayne@1
|
17691 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17692 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17693 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17694 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17695 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17696 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17697 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17698 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17699 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17700 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17701 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17702 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17703 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17704 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17705 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17706 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17707 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17708 </Hsp>
|
jpayne@1
|
17709 </Hit_hsps>
|
jpayne@1
|
17710 </Hit>
|
jpayne@1
|
17711 </Iteration_hits>
|
jpayne@1
|
17712 <Iteration_stat>
|
jpayne@1
|
17713 <Statistics>
|
jpayne@1
|
17714 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17715 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17716 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17717 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17718 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17719 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17720 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17721 </Statistics>
|
jpayne@1
|
17722 </Iteration_stat>
|
jpayne@1
|
17723 </Iteration>
|
jpayne@1
|
17724 <Iteration>
|
jpayne@1
|
17725 <Iteration_iter-num>346</Iteration_iter-num>
|
jpayne@1
|
17726 <Iteration_query-ID>Query_346</Iteration_query-ID>
|
jpayne@1
|
17727 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFT01000039_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17728 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17729 <Iteration_hits>
|
jpayne@1
|
17730 <Hit>
|
jpayne@1
|
17731 <Hit_num>1</Hit_num>
|
jpayne@1
|
17732 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17733 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17734 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17735 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17736 <Hit_hsps>
|
jpayne@1
|
17737 <Hsp>
|
jpayne@1
|
17738 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17739 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17740 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17741 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17742 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17743 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17744 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17745 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17746 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17747 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17748 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17749 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17750 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17751 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17752 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17753 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17754 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17755 </Hsp>
|
jpayne@1
|
17756 </Hit_hsps>
|
jpayne@1
|
17757 </Hit>
|
jpayne@1
|
17758 </Iteration_hits>
|
jpayne@1
|
17759 <Iteration_stat>
|
jpayne@1
|
17760 <Statistics>
|
jpayne@1
|
17761 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17762 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17763 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17764 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17765 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17766 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17767 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17768 </Statistics>
|
jpayne@1
|
17769 </Iteration_stat>
|
jpayne@1
|
17770 </Iteration>
|
jpayne@1
|
17771 <Iteration>
|
jpayne@1
|
17772 <Iteration_iter-num>347</Iteration_iter-num>
|
jpayne@1
|
17773 <Iteration_query-ID>Query_347</Iteration_query-ID>
|
jpayne@1
|
17774 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGD01000016_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17775 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17776 <Iteration_hits>
|
jpayne@1
|
17777 <Hit>
|
jpayne@1
|
17778 <Hit_num>1</Hit_num>
|
jpayne@1
|
17779 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17780 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17781 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17782 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17783 <Hit_hsps>
|
jpayne@1
|
17784 <Hsp>
|
jpayne@1
|
17785 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17786 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17787 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17788 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17789 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17790 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17791 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17792 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17793 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17794 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17795 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17796 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17797 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17798 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17799 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17800 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17801 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17802 </Hsp>
|
jpayne@1
|
17803 </Hit_hsps>
|
jpayne@1
|
17804 </Hit>
|
jpayne@1
|
17805 </Iteration_hits>
|
jpayne@1
|
17806 <Iteration_stat>
|
jpayne@1
|
17807 <Statistics>
|
jpayne@1
|
17808 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17809 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17810 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17811 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17812 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17813 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17814 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17815 </Statistics>
|
jpayne@1
|
17816 </Iteration_stat>
|
jpayne@1
|
17817 </Iteration>
|
jpayne@1
|
17818 <Iteration>
|
jpayne@1
|
17819 <Iteration_iter-num>348</Iteration_iter-num>
|
jpayne@1
|
17820 <Iteration_query-ID>Query_348</Iteration_query-ID>
|
jpayne@1
|
17821 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFW01000025_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17822 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17823 <Iteration_hits>
|
jpayne@1
|
17824 <Hit>
|
jpayne@1
|
17825 <Hit_num>1</Hit_num>
|
jpayne@1
|
17826 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17827 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17828 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17829 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17830 <Hit_hsps>
|
jpayne@1
|
17831 <Hsp>
|
jpayne@1
|
17832 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17833 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17834 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17835 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17836 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17837 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17838 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17839 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17840 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17841 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17842 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17843 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17844 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17845 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17846 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17847 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17848 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17849 </Hsp>
|
jpayne@1
|
17850 </Hit_hsps>
|
jpayne@1
|
17851 </Hit>
|
jpayne@1
|
17852 </Iteration_hits>
|
jpayne@1
|
17853 <Iteration_stat>
|
jpayne@1
|
17854 <Statistics>
|
jpayne@1
|
17855 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17856 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17857 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17858 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17859 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17860 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17861 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17862 </Statistics>
|
jpayne@1
|
17863 </Iteration_stat>
|
jpayne@1
|
17864 </Iteration>
|
jpayne@1
|
17865 <Iteration>
|
jpayne@1
|
17866 <Iteration_iter-num>349</Iteration_iter-num>
|
jpayne@1
|
17867 <Iteration_query-ID>Query_349</Iteration_query-ID>
|
jpayne@1
|
17868 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFQ01000034_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17869 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17870 <Iteration_hits>
|
jpayne@1
|
17871 <Hit>
|
jpayne@1
|
17872 <Hit_num>1</Hit_num>
|
jpayne@1
|
17873 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17874 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17875 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17876 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17877 <Hit_hsps>
|
jpayne@1
|
17878 <Hsp>
|
jpayne@1
|
17879 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17880 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17881 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17882 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17883 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17884 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17885 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17886 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17887 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17888 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17889 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17890 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17891 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17892 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17893 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17894 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17895 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17896 </Hsp>
|
jpayne@1
|
17897 </Hit_hsps>
|
jpayne@1
|
17898 </Hit>
|
jpayne@1
|
17899 </Iteration_hits>
|
jpayne@1
|
17900 <Iteration_stat>
|
jpayne@1
|
17901 <Statistics>
|
jpayne@1
|
17902 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17903 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17904 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17905 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17906 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17907 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17908 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17909 </Statistics>
|
jpayne@1
|
17910 </Iteration_stat>
|
jpayne@1
|
17911 </Iteration>
|
jpayne@1
|
17912 <Iteration>
|
jpayne@1
|
17913 <Iteration_iter-num>350</Iteration_iter-num>
|
jpayne@1
|
17914 <Iteration_query-ID>Query_350</Iteration_query-ID>
|
jpayne@1
|
17915 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFP01000018_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17916 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17917 <Iteration_hits>
|
jpayne@1
|
17918 <Hit>
|
jpayne@1
|
17919 <Hit_num>1</Hit_num>
|
jpayne@1
|
17920 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17921 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17922 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17923 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17924 <Hit_hsps>
|
jpayne@1
|
17925 <Hsp>
|
jpayne@1
|
17926 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17927 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17928 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17929 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17930 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17931 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17932 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17933 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17934 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17935 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17936 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17937 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17938 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17939 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17940 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17941 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17942 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17943 </Hsp>
|
jpayne@1
|
17944 </Hit_hsps>
|
jpayne@1
|
17945 </Hit>
|
jpayne@1
|
17946 </Iteration_hits>
|
jpayne@1
|
17947 <Iteration_stat>
|
jpayne@1
|
17948 <Statistics>
|
jpayne@1
|
17949 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17950 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17951 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17952 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
17953 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
17954 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
17955 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
17956 </Statistics>
|
jpayne@1
|
17957 </Iteration_stat>
|
jpayne@1
|
17958 </Iteration>
|
jpayne@1
|
17959 <Iteration>
|
jpayne@1
|
17960 <Iteration_iter-num>351</Iteration_iter-num>
|
jpayne@1
|
17961 <Iteration_query-ID>Query_351</Iteration_query-ID>
|
jpayne@1
|
17962 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFM01000038_g,m__1506</Iteration_query-def>
|
jpayne@1
|
17963 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
17964 <Iteration_hits>
|
jpayne@1
|
17965 <Hit>
|
jpayne@1
|
17966 <Hit_num>1</Hit_num>
|
jpayne@1
|
17967 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
17968 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
17969 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
17970 <Hit_len>1962</Hit_len>
|
jpayne@1
|
17971 <Hit_hsps>
|
jpayne@1
|
17972 <Hsp>
|
jpayne@1
|
17973 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
17974 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
17975 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
17976 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
17977 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
17978 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
17979 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
17980 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
17981 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
17982 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
17983 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
17984 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
17985 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
17986 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
17987 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
17988 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
17989 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
17990 </Hsp>
|
jpayne@1
|
17991 </Hit_hsps>
|
jpayne@1
|
17992 </Hit>
|
jpayne@1
|
17993 </Iteration_hits>
|
jpayne@1
|
17994 <Iteration_stat>
|
jpayne@1
|
17995 <Statistics>
|
jpayne@1
|
17996 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
17997 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
17998 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
17999 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18000 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18001 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18002 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18003 </Statistics>
|
jpayne@1
|
18004 </Iteration_stat>
|
jpayne@1
|
18005 </Iteration>
|
jpayne@1
|
18006 <Iteration>
|
jpayne@1
|
18007 <Iteration_iter-num>352</Iteration_iter-num>
|
jpayne@1
|
18008 <Iteration_query-ID>Query_352</Iteration_query-ID>
|
jpayne@1
|
18009 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFX01000034_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18010 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18011 <Iteration_hits>
|
jpayne@1
|
18012 <Hit>
|
jpayne@1
|
18013 <Hit_num>1</Hit_num>
|
jpayne@1
|
18014 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18015 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18016 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18017 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18018 <Hit_hsps>
|
jpayne@1
|
18019 <Hsp>
|
jpayne@1
|
18020 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18021 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18022 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18023 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18024 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18025 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18026 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18027 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18028 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18029 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18030 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18031 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18032 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18033 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18034 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18035 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18036 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18037 </Hsp>
|
jpayne@1
|
18038 </Hit_hsps>
|
jpayne@1
|
18039 </Hit>
|
jpayne@1
|
18040 </Iteration_hits>
|
jpayne@1
|
18041 <Iteration_stat>
|
jpayne@1
|
18042 <Statistics>
|
jpayne@1
|
18043 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18044 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18045 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18046 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18047 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18048 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18049 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18050 </Statistics>
|
jpayne@1
|
18051 </Iteration_stat>
|
jpayne@1
|
18052 </Iteration>
|
jpayne@1
|
18053 <Iteration>
|
jpayne@1
|
18054 <Iteration_iter-num>353</Iteration_iter-num>
|
jpayne@1
|
18055 <Iteration_query-ID>Query_353</Iteration_query-ID>
|
jpayne@1
|
18056 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFY01000023_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18057 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18058 <Iteration_hits>
|
jpayne@1
|
18059 <Hit>
|
jpayne@1
|
18060 <Hit_num>1</Hit_num>
|
jpayne@1
|
18061 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18062 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18063 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18064 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18065 <Hit_hsps>
|
jpayne@1
|
18066 <Hsp>
|
jpayne@1
|
18067 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18068 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18069 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18070 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18071 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18072 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18073 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18074 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18075 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18076 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18077 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18078 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18079 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18080 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18081 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18082 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18083 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18084 </Hsp>
|
jpayne@1
|
18085 </Hit_hsps>
|
jpayne@1
|
18086 </Hit>
|
jpayne@1
|
18087 </Iteration_hits>
|
jpayne@1
|
18088 <Iteration_stat>
|
jpayne@1
|
18089 <Statistics>
|
jpayne@1
|
18090 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18091 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18092 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18093 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18094 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18095 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18096 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18097 </Statistics>
|
jpayne@1
|
18098 </Iteration_stat>
|
jpayne@1
|
18099 </Iteration>
|
jpayne@1
|
18100 <Iteration>
|
jpayne@1
|
18101 <Iteration_iter-num>354</Iteration_iter-num>
|
jpayne@1
|
18102 <Iteration_query-ID>Query_354</Iteration_query-ID>
|
jpayne@1
|
18103 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGE01000023_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18104 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18105 <Iteration_hits>
|
jpayne@1
|
18106 <Hit>
|
jpayne@1
|
18107 <Hit_num>1</Hit_num>
|
jpayne@1
|
18108 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18109 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18110 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18111 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18112 <Hit_hsps>
|
jpayne@1
|
18113 <Hsp>
|
jpayne@1
|
18114 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18115 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18116 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18117 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18118 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18119 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18120 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18121 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18122 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18123 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18124 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18125 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18126 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18127 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18128 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18129 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18130 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18131 </Hsp>
|
jpayne@1
|
18132 </Hit_hsps>
|
jpayne@1
|
18133 </Hit>
|
jpayne@1
|
18134 </Iteration_hits>
|
jpayne@1
|
18135 <Iteration_stat>
|
jpayne@1
|
18136 <Statistics>
|
jpayne@1
|
18137 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18138 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18139 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18140 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18141 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18142 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18143 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18144 </Statistics>
|
jpayne@1
|
18145 </Iteration_stat>
|
jpayne@1
|
18146 </Iteration>
|
jpayne@1
|
18147 <Iteration>
|
jpayne@1
|
18148 <Iteration_iter-num>355</Iteration_iter-num>
|
jpayne@1
|
18149 <Iteration_query-ID>Query_355</Iteration_query-ID>
|
jpayne@1
|
18150 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFU01000016_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18151 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18152 <Iteration_hits>
|
jpayne@1
|
18153 <Hit>
|
jpayne@1
|
18154 <Hit_num>1</Hit_num>
|
jpayne@1
|
18155 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18156 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18157 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18158 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18159 <Hit_hsps>
|
jpayne@1
|
18160 <Hsp>
|
jpayne@1
|
18161 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18162 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18163 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18164 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18165 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18166 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18167 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18168 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18169 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18170 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18171 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18172 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18173 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18174 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18175 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18176 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18177 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18178 </Hsp>
|
jpayne@1
|
18179 </Hit_hsps>
|
jpayne@1
|
18180 </Hit>
|
jpayne@1
|
18181 </Iteration_hits>
|
jpayne@1
|
18182 <Iteration_stat>
|
jpayne@1
|
18183 <Statistics>
|
jpayne@1
|
18184 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18185 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18186 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18187 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18188 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18189 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18190 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18191 </Statistics>
|
jpayne@1
|
18192 </Iteration_stat>
|
jpayne@1
|
18193 </Iteration>
|
jpayne@1
|
18194 <Iteration>
|
jpayne@1
|
18195 <Iteration_iter-num>356</Iteration_iter-num>
|
jpayne@1
|
18196 <Iteration_query-ID>Query_356</Iteration_query-ID>
|
jpayne@1
|
18197 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFL01000019_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18198 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18199 <Iteration_hits>
|
jpayne@1
|
18200 <Hit>
|
jpayne@1
|
18201 <Hit_num>1</Hit_num>
|
jpayne@1
|
18202 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18203 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18204 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18205 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18206 <Hit_hsps>
|
jpayne@1
|
18207 <Hsp>
|
jpayne@1
|
18208 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18209 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18210 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18211 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18212 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18213 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18214 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18215 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18216 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18217 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18218 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18219 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18220 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18221 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18222 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18223 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18224 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18225 </Hsp>
|
jpayne@1
|
18226 </Hit_hsps>
|
jpayne@1
|
18227 </Hit>
|
jpayne@1
|
18228 </Iteration_hits>
|
jpayne@1
|
18229 <Iteration_stat>
|
jpayne@1
|
18230 <Statistics>
|
jpayne@1
|
18231 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18232 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18233 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18234 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18235 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18236 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18237 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18238 </Statistics>
|
jpayne@1
|
18239 </Iteration_stat>
|
jpayne@1
|
18240 </Iteration>
|
jpayne@1
|
18241 <Iteration>
|
jpayne@1
|
18242 <Iteration_iter-num>357</Iteration_iter-num>
|
jpayne@1
|
18243 <Iteration_query-ID>Query_357</Iteration_query-ID>
|
jpayne@1
|
18244 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFO01000021_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18245 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18246 <Iteration_hits>
|
jpayne@1
|
18247 <Hit>
|
jpayne@1
|
18248 <Hit_num>1</Hit_num>
|
jpayne@1
|
18249 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18250 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18251 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18252 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18253 <Hit_hsps>
|
jpayne@1
|
18254 <Hsp>
|
jpayne@1
|
18255 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18256 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18257 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18258 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18259 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18260 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18261 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18262 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18263 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18264 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18265 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18266 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18267 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18268 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18269 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18270 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18271 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18272 </Hsp>
|
jpayne@1
|
18273 </Hit_hsps>
|
jpayne@1
|
18274 </Hit>
|
jpayne@1
|
18275 </Iteration_hits>
|
jpayne@1
|
18276 <Iteration_stat>
|
jpayne@1
|
18277 <Statistics>
|
jpayne@1
|
18278 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18279 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18280 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18281 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18282 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18283 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18284 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18285 </Statistics>
|
jpayne@1
|
18286 </Iteration_stat>
|
jpayne@1
|
18287 </Iteration>
|
jpayne@1
|
18288 <Iteration>
|
jpayne@1
|
18289 <Iteration_iter-num>358</Iteration_iter-num>
|
jpayne@1
|
18290 <Iteration_query-ID>Query_358</Iteration_query-ID>
|
jpayne@1
|
18291 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFZ01000046_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18292 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18293 <Iteration_hits>
|
jpayne@1
|
18294 <Hit>
|
jpayne@1
|
18295 <Hit_num>1</Hit_num>
|
jpayne@1
|
18296 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18297 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18298 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18299 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18300 <Hit_hsps>
|
jpayne@1
|
18301 <Hsp>
|
jpayne@1
|
18302 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18303 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18304 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18305 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18306 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18307 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18308 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18309 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18310 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18311 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18312 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18313 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18314 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18315 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18316 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18317 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18318 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18319 </Hsp>
|
jpayne@1
|
18320 </Hit_hsps>
|
jpayne@1
|
18321 </Hit>
|
jpayne@1
|
18322 </Iteration_hits>
|
jpayne@1
|
18323 <Iteration_stat>
|
jpayne@1
|
18324 <Statistics>
|
jpayne@1
|
18325 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18326 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18327 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18328 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18329 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18330 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18331 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18332 </Statistics>
|
jpayne@1
|
18333 </Iteration_stat>
|
jpayne@1
|
18334 </Iteration>
|
jpayne@1
|
18335 <Iteration>
|
jpayne@1
|
18336 <Iteration_iter-num>359</Iteration_iter-num>
|
jpayne@1
|
18337 <Iteration_query-ID>Query_359</Iteration_query-ID>
|
jpayne@1
|
18338 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGA01000022_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18339 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18340 <Iteration_hits>
|
jpayne@1
|
18341 <Hit>
|
jpayne@1
|
18342 <Hit_num>1</Hit_num>
|
jpayne@1
|
18343 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18344 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18345 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18346 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18347 <Hit_hsps>
|
jpayne@1
|
18348 <Hsp>
|
jpayne@1
|
18349 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18350 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18351 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18352 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18353 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18354 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18355 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18356 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18357 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18358 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18359 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18360 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18361 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18362 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18363 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18364 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18365 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18366 </Hsp>
|
jpayne@1
|
18367 </Hit_hsps>
|
jpayne@1
|
18368 </Hit>
|
jpayne@1
|
18369 </Iteration_hits>
|
jpayne@1
|
18370 <Iteration_stat>
|
jpayne@1
|
18371 <Statistics>
|
jpayne@1
|
18372 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18373 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18374 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18375 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18376 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18377 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18378 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18379 </Statistics>
|
jpayne@1
|
18380 </Iteration_stat>
|
jpayne@1
|
18381 </Iteration>
|
jpayne@1
|
18382 <Iteration>
|
jpayne@1
|
18383 <Iteration_iter-num>360</Iteration_iter-num>
|
jpayne@1
|
18384 <Iteration_query-ID>Query_360</Iteration_query-ID>
|
jpayne@1
|
18385 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFJ01000022_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18386 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18387 <Iteration_hits>
|
jpayne@1
|
18388 <Hit>
|
jpayne@1
|
18389 <Hit_num>1</Hit_num>
|
jpayne@1
|
18390 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18391 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18392 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18393 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18394 <Hit_hsps>
|
jpayne@1
|
18395 <Hsp>
|
jpayne@1
|
18396 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18397 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18398 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18399 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18400 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18401 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18402 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18403 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18404 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18405 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18406 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18407 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18408 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18409 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18410 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18411 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18412 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18413 </Hsp>
|
jpayne@1
|
18414 </Hit_hsps>
|
jpayne@1
|
18415 </Hit>
|
jpayne@1
|
18416 </Iteration_hits>
|
jpayne@1
|
18417 <Iteration_stat>
|
jpayne@1
|
18418 <Statistics>
|
jpayne@1
|
18419 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18420 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18421 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18422 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18423 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18424 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18425 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18426 </Statistics>
|
jpayne@1
|
18427 </Iteration_stat>
|
jpayne@1
|
18428 </Iteration>
|
jpayne@1
|
18429 <Iteration>
|
jpayne@1
|
18430 <Iteration_iter-num>361</Iteration_iter-num>
|
jpayne@1
|
18431 <Iteration_query-ID>Query_361</Iteration_query-ID>
|
jpayne@1
|
18432 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGF01000038_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18433 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18434 <Iteration_hits>
|
jpayne@1
|
18435 <Hit>
|
jpayne@1
|
18436 <Hit_num>1</Hit_num>
|
jpayne@1
|
18437 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18438 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18439 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18440 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18441 <Hit_hsps>
|
jpayne@1
|
18442 <Hsp>
|
jpayne@1
|
18443 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18444 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18445 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18446 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18447 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18448 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18449 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18450 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18451 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18452 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18453 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18454 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18455 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18456 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18457 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18458 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18459 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18460 </Hsp>
|
jpayne@1
|
18461 </Hit_hsps>
|
jpayne@1
|
18462 </Hit>
|
jpayne@1
|
18463 </Iteration_hits>
|
jpayne@1
|
18464 <Iteration_stat>
|
jpayne@1
|
18465 <Statistics>
|
jpayne@1
|
18466 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18467 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18468 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18469 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18470 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18471 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18472 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18473 </Statistics>
|
jpayne@1
|
18474 </Iteration_stat>
|
jpayne@1
|
18475 </Iteration>
|
jpayne@1
|
18476 <Iteration>
|
jpayne@1
|
18477 <Iteration_iter-num>362</Iteration_iter-num>
|
jpayne@1
|
18478 <Iteration_query-ID>Query_362</Iteration_query-ID>
|
jpayne@1
|
18479 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFK01000019_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18480 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18481 <Iteration_hits>
|
jpayne@1
|
18482 <Hit>
|
jpayne@1
|
18483 <Hit_num>1</Hit_num>
|
jpayne@1
|
18484 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18485 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18486 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18487 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18488 <Hit_hsps>
|
jpayne@1
|
18489 <Hsp>
|
jpayne@1
|
18490 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18491 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18492 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18493 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18494 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18495 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18496 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18497 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18498 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18499 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18500 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18501 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18502 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18503 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18504 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18505 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18506 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18507 </Hsp>
|
jpayne@1
|
18508 </Hit_hsps>
|
jpayne@1
|
18509 </Hit>
|
jpayne@1
|
18510 </Iteration_hits>
|
jpayne@1
|
18511 <Iteration_stat>
|
jpayne@1
|
18512 <Statistics>
|
jpayne@1
|
18513 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18514 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18515 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18516 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18517 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18518 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18519 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18520 </Statistics>
|
jpayne@1
|
18521 </Iteration_stat>
|
jpayne@1
|
18522 </Iteration>
|
jpayne@1
|
18523 <Iteration>
|
jpayne@1
|
18524 <Iteration_iter-num>363</Iteration_iter-num>
|
jpayne@1
|
18525 <Iteration_query-ID>Query_363</Iteration_query-ID>
|
jpayne@1
|
18526 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFI01000018_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18527 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18528 <Iteration_hits>
|
jpayne@1
|
18529 <Hit>
|
jpayne@1
|
18530 <Hit_num>1</Hit_num>
|
jpayne@1
|
18531 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18532 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18533 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18534 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18535 <Hit_hsps>
|
jpayne@1
|
18536 <Hsp>
|
jpayne@1
|
18537 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18538 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18539 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18540 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18541 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18542 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18543 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18544 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18545 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18546 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18547 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18548 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18549 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18550 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18551 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18552 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18553 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18554 </Hsp>
|
jpayne@1
|
18555 </Hit_hsps>
|
jpayne@1
|
18556 </Hit>
|
jpayne@1
|
18557 </Iteration_hits>
|
jpayne@1
|
18558 <Iteration_stat>
|
jpayne@1
|
18559 <Statistics>
|
jpayne@1
|
18560 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18561 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18562 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18563 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18564 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18565 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18566 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18567 </Statistics>
|
jpayne@1
|
18568 </Iteration_stat>
|
jpayne@1
|
18569 </Iteration>
|
jpayne@1
|
18570 <Iteration>
|
jpayne@1
|
18571 <Iteration_iter-num>364</Iteration_iter-num>
|
jpayne@1
|
18572 <Iteration_query-ID>Query_364</Iteration_query-ID>
|
jpayne@1
|
18573 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGG01000021_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18574 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18575 <Iteration_hits>
|
jpayne@1
|
18576 <Hit>
|
jpayne@1
|
18577 <Hit_num>1</Hit_num>
|
jpayne@1
|
18578 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18579 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18580 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18581 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18582 <Hit_hsps>
|
jpayne@1
|
18583 <Hsp>
|
jpayne@1
|
18584 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18585 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18586 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18587 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18588 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18589 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18590 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18591 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18592 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18593 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18594 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18595 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18596 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18597 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18598 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18599 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18600 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18601 </Hsp>
|
jpayne@1
|
18602 </Hit_hsps>
|
jpayne@1
|
18603 </Hit>
|
jpayne@1
|
18604 </Iteration_hits>
|
jpayne@1
|
18605 <Iteration_stat>
|
jpayne@1
|
18606 <Statistics>
|
jpayne@1
|
18607 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18608 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18609 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18610 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18611 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18612 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18613 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18614 </Statistics>
|
jpayne@1
|
18615 </Iteration_stat>
|
jpayne@1
|
18616 </Iteration>
|
jpayne@1
|
18617 <Iteration>
|
jpayne@1
|
18618 <Iteration_iter-num>365</Iteration_iter-num>
|
jpayne@1
|
18619 <Iteration_query-ID>Query_365</Iteration_query-ID>
|
jpayne@1
|
18620 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFR01000018_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18621 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18622 <Iteration_hits>
|
jpayne@1
|
18623 <Hit>
|
jpayne@1
|
18624 <Hit_num>1</Hit_num>
|
jpayne@1
|
18625 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18626 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18627 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18628 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18629 <Hit_hsps>
|
jpayne@1
|
18630 <Hsp>
|
jpayne@1
|
18631 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18632 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18633 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18634 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18635 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18636 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18637 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18638 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18639 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18640 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18641 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18642 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18643 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18644 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18645 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18646 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18647 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18648 </Hsp>
|
jpayne@1
|
18649 </Hit_hsps>
|
jpayne@1
|
18650 </Hit>
|
jpayne@1
|
18651 </Iteration_hits>
|
jpayne@1
|
18652 <Iteration_stat>
|
jpayne@1
|
18653 <Statistics>
|
jpayne@1
|
18654 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18655 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18656 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18657 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18658 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18659 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18660 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18661 </Statistics>
|
jpayne@1
|
18662 </Iteration_stat>
|
jpayne@1
|
18663 </Iteration>
|
jpayne@1
|
18664 <Iteration>
|
jpayne@1
|
18665 <Iteration_iter-num>366</Iteration_iter-num>
|
jpayne@1
|
18666 <Iteration_query-ID>Query_366</Iteration_query-ID>
|
jpayne@1
|
18667 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGH01000031_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18668 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18669 <Iteration_hits>
|
jpayne@1
|
18670 <Hit>
|
jpayne@1
|
18671 <Hit_num>1</Hit_num>
|
jpayne@1
|
18672 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18673 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18674 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18675 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18676 <Hit_hsps>
|
jpayne@1
|
18677 <Hsp>
|
jpayne@1
|
18678 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18679 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18680 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18681 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18682 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18683 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18684 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18685 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18686 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18687 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18688 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18689 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18690 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18691 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18692 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18693 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18694 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18695 </Hsp>
|
jpayne@1
|
18696 </Hit_hsps>
|
jpayne@1
|
18697 </Hit>
|
jpayne@1
|
18698 </Iteration_hits>
|
jpayne@1
|
18699 <Iteration_stat>
|
jpayne@1
|
18700 <Statistics>
|
jpayne@1
|
18701 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18702 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18703 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18704 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18705 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18706 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18707 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18708 </Statistics>
|
jpayne@1
|
18709 </Iteration_stat>
|
jpayne@1
|
18710 </Iteration>
|
jpayne@1
|
18711 <Iteration>
|
jpayne@1
|
18712 <Iteration_iter-num>367</Iteration_iter-num>
|
jpayne@1
|
18713 <Iteration_query-ID>Query_367</Iteration_query-ID>
|
jpayne@1
|
18714 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFV01000024_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18715 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18716 <Iteration_hits>
|
jpayne@1
|
18717 <Hit>
|
jpayne@1
|
18718 <Hit_num>1</Hit_num>
|
jpayne@1
|
18719 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18720 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18721 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18722 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18723 <Hit_hsps>
|
jpayne@1
|
18724 <Hsp>
|
jpayne@1
|
18725 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18726 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18727 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18728 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18729 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18730 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18731 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18732 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18733 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18734 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18735 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18736 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18737 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18738 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18739 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18740 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18741 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18742 </Hsp>
|
jpayne@1
|
18743 </Hit_hsps>
|
jpayne@1
|
18744 </Hit>
|
jpayne@1
|
18745 </Iteration_hits>
|
jpayne@1
|
18746 <Iteration_stat>
|
jpayne@1
|
18747 <Statistics>
|
jpayne@1
|
18748 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18749 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18750 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18751 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18752 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18753 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18754 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18755 </Statistics>
|
jpayne@1
|
18756 </Iteration_stat>
|
jpayne@1
|
18757 </Iteration>
|
jpayne@1
|
18758 <Iteration>
|
jpayne@1
|
18759 <Iteration_iter-num>368</Iteration_iter-num>
|
jpayne@1
|
18760 <Iteration_query-ID>Query_368</Iteration_query-ID>
|
jpayne@1
|
18761 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGI01000021_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18762 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18763 <Iteration_hits>
|
jpayne@1
|
18764 <Hit>
|
jpayne@1
|
18765 <Hit_num>1</Hit_num>
|
jpayne@1
|
18766 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18767 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18768 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18769 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18770 <Hit_hsps>
|
jpayne@1
|
18771 <Hsp>
|
jpayne@1
|
18772 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18773 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18774 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18775 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18776 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18777 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18778 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18779 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18780 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18781 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18782 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18783 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18784 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18785 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18786 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18787 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18788 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18789 </Hsp>
|
jpayne@1
|
18790 </Hit_hsps>
|
jpayne@1
|
18791 </Hit>
|
jpayne@1
|
18792 </Iteration_hits>
|
jpayne@1
|
18793 <Iteration_stat>
|
jpayne@1
|
18794 <Statistics>
|
jpayne@1
|
18795 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18796 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18797 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18798 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18799 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18800 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18801 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18802 </Statistics>
|
jpayne@1
|
18803 </Iteration_stat>
|
jpayne@1
|
18804 </Iteration>
|
jpayne@1
|
18805 <Iteration>
|
jpayne@1
|
18806 <Iteration_iter-num>369</Iteration_iter-num>
|
jpayne@1
|
18807 <Iteration_query-ID>Query_369</Iteration_query-ID>
|
jpayne@1
|
18808 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGJ01000044_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18809 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18810 <Iteration_hits>
|
jpayne@1
|
18811 <Hit>
|
jpayne@1
|
18812 <Hit_num>1</Hit_num>
|
jpayne@1
|
18813 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18814 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18815 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18816 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18817 <Hit_hsps>
|
jpayne@1
|
18818 <Hsp>
|
jpayne@1
|
18819 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18820 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18821 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18822 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18823 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18824 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18825 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18826 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18827 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18828 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18829 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18830 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18831 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18832 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18833 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18834 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18835 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18836 </Hsp>
|
jpayne@1
|
18837 </Hit_hsps>
|
jpayne@1
|
18838 </Hit>
|
jpayne@1
|
18839 </Iteration_hits>
|
jpayne@1
|
18840 <Iteration_stat>
|
jpayne@1
|
18841 <Statistics>
|
jpayne@1
|
18842 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18843 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18844 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18845 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18846 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18847 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18848 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18849 </Statistics>
|
jpayne@1
|
18850 </Iteration_stat>
|
jpayne@1
|
18851 </Iteration>
|
jpayne@1
|
18852 <Iteration>
|
jpayne@1
|
18853 <Iteration_iter-num>370</Iteration_iter-num>
|
jpayne@1
|
18854 <Iteration_query-ID>Query_370</Iteration_query-ID>
|
jpayne@1
|
18855 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGB01000061_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18856 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18857 <Iteration_hits>
|
jpayne@1
|
18858 <Hit>
|
jpayne@1
|
18859 <Hit_num>1</Hit_num>
|
jpayne@1
|
18860 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18861 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18862 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18863 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18864 <Hit_hsps>
|
jpayne@1
|
18865 <Hsp>
|
jpayne@1
|
18866 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18867 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18868 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18869 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18870 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18871 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18872 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18873 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18874 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18875 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18876 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18877 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18878 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18879 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18880 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18881 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18882 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18883 </Hsp>
|
jpayne@1
|
18884 </Hit_hsps>
|
jpayne@1
|
18885 </Hit>
|
jpayne@1
|
18886 </Iteration_hits>
|
jpayne@1
|
18887 <Iteration_stat>
|
jpayne@1
|
18888 <Statistics>
|
jpayne@1
|
18889 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18890 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18891 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18892 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18893 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18894 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18895 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18896 </Statistics>
|
jpayne@1
|
18897 </Iteration_stat>
|
jpayne@1
|
18898 </Iteration>
|
jpayne@1
|
18899 <Iteration>
|
jpayne@1
|
18900 <Iteration_iter-num>371</Iteration_iter-num>
|
jpayne@1
|
18901 <Iteration_query-ID>Query_371</Iteration_query-ID>
|
jpayne@1
|
18902 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFN01000056_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18903 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18904 <Iteration_hits>
|
jpayne@1
|
18905 <Hit>
|
jpayne@1
|
18906 <Hit_num>1</Hit_num>
|
jpayne@1
|
18907 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18908 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18909 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18910 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18911 <Hit_hsps>
|
jpayne@1
|
18912 <Hsp>
|
jpayne@1
|
18913 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18914 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18915 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18916 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18917 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18918 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18919 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18920 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18921 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18922 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18923 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18924 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18925 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18926 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18927 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18928 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18929 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18930 </Hsp>
|
jpayne@1
|
18931 </Hit_hsps>
|
jpayne@1
|
18932 </Hit>
|
jpayne@1
|
18933 </Iteration_hits>
|
jpayne@1
|
18934 <Iteration_stat>
|
jpayne@1
|
18935 <Statistics>
|
jpayne@1
|
18936 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18937 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18938 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18939 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18940 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18941 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18942 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18943 </Statistics>
|
jpayne@1
|
18944 </Iteration_stat>
|
jpayne@1
|
18945 </Iteration>
|
jpayne@1
|
18946 <Iteration>
|
jpayne@1
|
18947 <Iteration_iter-num>372</Iteration_iter-num>
|
jpayne@1
|
18948 <Iteration_query-ID>Query_372</Iteration_query-ID>
|
jpayne@1
|
18949 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGC01000031_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18950 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18951 <Iteration_hits>
|
jpayne@1
|
18952 <Hit>
|
jpayne@1
|
18953 <Hit_num>1</Hit_num>
|
jpayne@1
|
18954 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
18955 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
18956 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
18957 <Hit_len>1962</Hit_len>
|
jpayne@1
|
18958 <Hit_hsps>
|
jpayne@1
|
18959 <Hsp>
|
jpayne@1
|
18960 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
18961 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
18962 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
18963 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
18964 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
18965 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
18966 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
18967 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
18968 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
18969 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
18970 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
18971 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
18972 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
18973 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
18974 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
18975 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
18976 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
18977 </Hsp>
|
jpayne@1
|
18978 </Hit_hsps>
|
jpayne@1
|
18979 </Hit>
|
jpayne@1
|
18980 </Iteration_hits>
|
jpayne@1
|
18981 <Iteration_stat>
|
jpayne@1
|
18982 <Statistics>
|
jpayne@1
|
18983 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
18984 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
18985 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
18986 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
18987 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
18988 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
18989 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
18990 </Statistics>
|
jpayne@1
|
18991 </Iteration_stat>
|
jpayne@1
|
18992 </Iteration>
|
jpayne@1
|
18993 <Iteration>
|
jpayne@1
|
18994 <Iteration_iter-num>373</Iteration_iter-num>
|
jpayne@1
|
18995 <Iteration_query-ID>Query_373</Iteration_query-ID>
|
jpayne@1
|
18996 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFG01000038_g,m__1506</Iteration_query-def>
|
jpayne@1
|
18997 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
18998 <Iteration_hits>
|
jpayne@1
|
18999 <Hit>
|
jpayne@1
|
19000 <Hit_num>1</Hit_num>
|
jpayne@1
|
19001 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19002 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19003 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19004 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19005 <Hit_hsps>
|
jpayne@1
|
19006 <Hsp>
|
jpayne@1
|
19007 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19008 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19009 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19010 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19011 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19012 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19013 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19014 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19015 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19016 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19017 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19018 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19019 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19020 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19021 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19022 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19023 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19024 </Hsp>
|
jpayne@1
|
19025 </Hit_hsps>
|
jpayne@1
|
19026 </Hit>
|
jpayne@1
|
19027 </Iteration_hits>
|
jpayne@1
|
19028 <Iteration_stat>
|
jpayne@1
|
19029 <Statistics>
|
jpayne@1
|
19030 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19031 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19032 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19033 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19034 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19035 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19036 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19037 </Statistics>
|
jpayne@1
|
19038 </Iteration_stat>
|
jpayne@1
|
19039 </Iteration>
|
jpayne@1
|
19040 <Iteration>
|
jpayne@1
|
19041 <Iteration_iter-num>374</Iteration_iter-num>
|
jpayne@1
|
19042 <Iteration_query-ID>Query_374</Iteration_query-ID>
|
jpayne@1
|
19043 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFH01000028_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19044 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19045 <Iteration_hits>
|
jpayne@1
|
19046 <Hit>
|
jpayne@1
|
19047 <Hit_num>1</Hit_num>
|
jpayne@1
|
19048 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19049 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19050 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19051 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19052 <Hit_hsps>
|
jpayne@1
|
19053 <Hsp>
|
jpayne@1
|
19054 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19055 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19056 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19057 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19058 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19059 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19060 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19061 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19062 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19063 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19064 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19065 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19066 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19067 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19068 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19069 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19070 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19071 </Hsp>
|
jpayne@1
|
19072 </Hit_hsps>
|
jpayne@1
|
19073 </Hit>
|
jpayne@1
|
19074 </Iteration_hits>
|
jpayne@1
|
19075 <Iteration_stat>
|
jpayne@1
|
19076 <Statistics>
|
jpayne@1
|
19077 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19078 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19079 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19080 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19081 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19082 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19083 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19084 </Statistics>
|
jpayne@1
|
19085 </Iteration_stat>
|
jpayne@1
|
19086 </Iteration>
|
jpayne@1
|
19087 <Iteration>
|
jpayne@1
|
19088 <Iteration_iter-num>375</Iteration_iter-num>
|
jpayne@1
|
19089 <Iteration_query-ID>Query_375</Iteration_query-ID>
|
jpayne@1
|
19090 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFF01000001_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19091 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19092 <Iteration_hits>
|
jpayne@1
|
19093 <Hit>
|
jpayne@1
|
19094 <Hit_num>1</Hit_num>
|
jpayne@1
|
19095 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19096 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19097 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19098 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19099 <Hit_hsps>
|
jpayne@1
|
19100 <Hsp>
|
jpayne@1
|
19101 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19102 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19103 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19104 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19105 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19106 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19107 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19108 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19109 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19110 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19111 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19112 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19113 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19114 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19115 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19116 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19117 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19118 </Hsp>
|
jpayne@1
|
19119 </Hit_hsps>
|
jpayne@1
|
19120 </Hit>
|
jpayne@1
|
19121 </Iteration_hits>
|
jpayne@1
|
19122 <Iteration_stat>
|
jpayne@1
|
19123 <Statistics>
|
jpayne@1
|
19124 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19125 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19126 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19127 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19128 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19129 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19130 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19131 </Statistics>
|
jpayne@1
|
19132 </Iteration_stat>
|
jpayne@1
|
19133 </Iteration>
|
jpayne@1
|
19134 <Iteration>
|
jpayne@1
|
19135 <Iteration_iter-num>376</Iteration_iter-num>
|
jpayne@1
|
19136 <Iteration_query-ID>Query_376</Iteration_query-ID>
|
jpayne@1
|
19137 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHC01000046_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19138 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19139 <Iteration_hits>
|
jpayne@1
|
19140 <Hit>
|
jpayne@1
|
19141 <Hit_num>1</Hit_num>
|
jpayne@1
|
19142 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19143 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19144 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19145 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19146 <Hit_hsps>
|
jpayne@1
|
19147 <Hsp>
|
jpayne@1
|
19148 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19149 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19150 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19151 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19152 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19153 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19154 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19155 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19156 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19157 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19158 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19159 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19160 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19161 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19162 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19163 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19164 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19165 </Hsp>
|
jpayne@1
|
19166 </Hit_hsps>
|
jpayne@1
|
19167 </Hit>
|
jpayne@1
|
19168 </Iteration_hits>
|
jpayne@1
|
19169 <Iteration_stat>
|
jpayne@1
|
19170 <Statistics>
|
jpayne@1
|
19171 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19172 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19173 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19174 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19175 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19176 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19177 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19178 </Statistics>
|
jpayne@1
|
19179 </Iteration_stat>
|
jpayne@1
|
19180 </Iteration>
|
jpayne@1
|
19181 <Iteration>
|
jpayne@1
|
19182 <Iteration_iter-num>377</Iteration_iter-num>
|
jpayne@1
|
19183 <Iteration_query-ID>Query_377</Iteration_query-ID>
|
jpayne@1
|
19184 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGT01000028_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19185 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19186 <Iteration_hits>
|
jpayne@1
|
19187 <Hit>
|
jpayne@1
|
19188 <Hit_num>1</Hit_num>
|
jpayne@1
|
19189 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19190 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19191 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19192 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19193 <Hit_hsps>
|
jpayne@1
|
19194 <Hsp>
|
jpayne@1
|
19195 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19196 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19197 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19198 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19199 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19200 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19201 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19202 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19203 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19204 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19205 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19206 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19207 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19208 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19209 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19210 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19211 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19212 </Hsp>
|
jpayne@1
|
19213 </Hit_hsps>
|
jpayne@1
|
19214 </Hit>
|
jpayne@1
|
19215 </Iteration_hits>
|
jpayne@1
|
19216 <Iteration_stat>
|
jpayne@1
|
19217 <Statistics>
|
jpayne@1
|
19218 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19219 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19220 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19221 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19222 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19223 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19224 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19225 </Statistics>
|
jpayne@1
|
19226 </Iteration_stat>
|
jpayne@1
|
19227 </Iteration>
|
jpayne@1
|
19228 <Iteration>
|
jpayne@1
|
19229 <Iteration_iter-num>378</Iteration_iter-num>
|
jpayne@1
|
19230 <Iteration_query-ID>Query_378</Iteration_query-ID>
|
jpayne@1
|
19231 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGZ01000018_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19232 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19233 <Iteration_hits>
|
jpayne@1
|
19234 <Hit>
|
jpayne@1
|
19235 <Hit_num>1</Hit_num>
|
jpayne@1
|
19236 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19237 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19238 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19239 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19240 <Hit_hsps>
|
jpayne@1
|
19241 <Hsp>
|
jpayne@1
|
19242 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19243 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19244 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19245 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19246 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19247 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19248 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19249 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19250 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19251 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19252 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19253 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19254 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19255 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19256 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19257 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19258 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19259 </Hsp>
|
jpayne@1
|
19260 </Hit_hsps>
|
jpayne@1
|
19261 </Hit>
|
jpayne@1
|
19262 </Iteration_hits>
|
jpayne@1
|
19263 <Iteration_stat>
|
jpayne@1
|
19264 <Statistics>
|
jpayne@1
|
19265 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19266 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19267 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19268 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19269 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19270 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19271 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19272 </Statistics>
|
jpayne@1
|
19273 </Iteration_stat>
|
jpayne@1
|
19274 </Iteration>
|
jpayne@1
|
19275 <Iteration>
|
jpayne@1
|
19276 <Iteration_iter-num>379</Iteration_iter-num>
|
jpayne@1
|
19277 <Iteration_query-ID>Query_379</Iteration_query-ID>
|
jpayne@1
|
19278 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGU01000066_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19279 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19280 <Iteration_hits>
|
jpayne@1
|
19281 <Hit>
|
jpayne@1
|
19282 <Hit_num>1</Hit_num>
|
jpayne@1
|
19283 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19284 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19285 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19286 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19287 <Hit_hsps>
|
jpayne@1
|
19288 <Hsp>
|
jpayne@1
|
19289 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19290 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19291 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19292 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19293 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19294 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19295 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19296 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19297 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19298 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19299 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19300 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19301 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19302 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19303 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19304 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19305 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19306 </Hsp>
|
jpayne@1
|
19307 </Hit_hsps>
|
jpayne@1
|
19308 </Hit>
|
jpayne@1
|
19309 </Iteration_hits>
|
jpayne@1
|
19310 <Iteration_stat>
|
jpayne@1
|
19311 <Statistics>
|
jpayne@1
|
19312 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19313 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19314 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19315 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19316 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19317 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19318 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19319 </Statistics>
|
jpayne@1
|
19320 </Iteration_stat>
|
jpayne@1
|
19321 </Iteration>
|
jpayne@1
|
19322 <Iteration>
|
jpayne@1
|
19323 <Iteration_iter-num>380</Iteration_iter-num>
|
jpayne@1
|
19324 <Iteration_query-ID>Query_380</Iteration_query-ID>
|
jpayne@1
|
19325 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGW01000034_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19326 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19327 <Iteration_hits>
|
jpayne@1
|
19328 <Hit>
|
jpayne@1
|
19329 <Hit_num>1</Hit_num>
|
jpayne@1
|
19330 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19331 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19332 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19333 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19334 <Hit_hsps>
|
jpayne@1
|
19335 <Hsp>
|
jpayne@1
|
19336 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19337 <Hsp_bit-score>2582.74</Hsp_bit-score>
|
jpayne@1
|
19338 <Hsp_score>1398</Hsp_score>
|
jpayne@1
|
19339 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19340 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19341 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19342 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19343 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19344 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19345 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19346 <Hsp_identity>1470</Hsp_identity>
|
jpayne@1
|
19347 <Hsp_positive>1470</Hsp_positive>
|
jpayne@1
|
19348 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19349 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19350 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGACGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19351 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19352 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || ||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19353 </Hsp>
|
jpayne@1
|
19354 </Hit_hsps>
|
jpayne@1
|
19355 </Hit>
|
jpayne@1
|
19356 </Iteration_hits>
|
jpayne@1
|
19357 <Iteration_stat>
|
jpayne@1
|
19358 <Statistics>
|
jpayne@1
|
19359 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19360 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19361 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19362 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19363 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19364 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19365 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19366 </Statistics>
|
jpayne@1
|
19367 </Iteration_stat>
|
jpayne@1
|
19368 </Iteration>
|
jpayne@1
|
19369 <Iteration>
|
jpayne@1
|
19370 <Iteration_iter-num>381</Iteration_iter-num>
|
jpayne@1
|
19371 <Iteration_query-ID>Query_381</Iteration_query-ID>
|
jpayne@1
|
19372 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGS01000033_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19373 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19374 <Iteration_hits>
|
jpayne@1
|
19375 <Hit>
|
jpayne@1
|
19376 <Hit_num>1</Hit_num>
|
jpayne@1
|
19377 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19378 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19379 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19380 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19381 <Hit_hsps>
|
jpayne@1
|
19382 <Hsp>
|
jpayne@1
|
19383 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19384 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19385 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19386 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19387 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19388 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19389 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19390 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19391 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19392 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19393 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19394 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19395 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19396 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19397 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19398 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19399 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19400 </Hsp>
|
jpayne@1
|
19401 </Hit_hsps>
|
jpayne@1
|
19402 </Hit>
|
jpayne@1
|
19403 </Iteration_hits>
|
jpayne@1
|
19404 <Iteration_stat>
|
jpayne@1
|
19405 <Statistics>
|
jpayne@1
|
19406 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19407 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19408 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19409 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19410 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19411 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19412 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19413 </Statistics>
|
jpayne@1
|
19414 </Iteration_stat>
|
jpayne@1
|
19415 </Iteration>
|
jpayne@1
|
19416 <Iteration>
|
jpayne@1
|
19417 <Iteration_iter-num>382</Iteration_iter-num>
|
jpayne@1
|
19418 <Iteration_query-ID>Query_382</Iteration_query-ID>
|
jpayne@1
|
19419 <Iteration_query-def>fliC_g,m_Enteritidisstr_CAGR02000072_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19420 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19421 <Iteration_hits>
|
jpayne@1
|
19422 <Hit>
|
jpayne@1
|
19423 <Hit_num>1</Hit_num>
|
jpayne@1
|
19424 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19425 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19426 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19427 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19428 <Hit_hsps>
|
jpayne@1
|
19429 <Hsp>
|
jpayne@1
|
19430 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19431 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19432 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19433 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19434 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19435 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19436 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19437 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19438 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19439 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19440 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19441 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19442 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19443 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19444 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19445 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19446 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19447 </Hsp>
|
jpayne@1
|
19448 </Hit_hsps>
|
jpayne@1
|
19449 </Hit>
|
jpayne@1
|
19450 </Iteration_hits>
|
jpayne@1
|
19451 <Iteration_stat>
|
jpayne@1
|
19452 <Statistics>
|
jpayne@1
|
19453 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19454 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19455 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19456 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19457 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19458 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19459 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19460 </Statistics>
|
jpayne@1
|
19461 </Iteration_stat>
|
jpayne@1
|
19462 </Iteration>
|
jpayne@1
|
19463 <Iteration>
|
jpayne@1
|
19464 <Iteration_iter-num>383</Iteration_iter-num>
|
jpayne@1
|
19465 <Iteration_query-ID>Query_383</Iteration_query-ID>
|
jpayne@1
|
19466 <Iteration_query-def>fliC_g,m_Enteritidisstr_AHUR01000042_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19467 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19468 <Iteration_hits>
|
jpayne@1
|
19469 <Hit>
|
jpayne@1
|
19470 <Hit_num>1</Hit_num>
|
jpayne@1
|
19471 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19472 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19473 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19474 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19475 <Hit_hsps>
|
jpayne@1
|
19476 <Hsp>
|
jpayne@1
|
19477 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19478 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19479 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19480 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19481 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19482 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19483 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19484 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19485 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19486 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19487 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19488 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19489 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19490 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19491 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19492 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19493 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19494 </Hsp>
|
jpayne@1
|
19495 </Hit_hsps>
|
jpayne@1
|
19496 </Hit>
|
jpayne@1
|
19497 </Iteration_hits>
|
jpayne@1
|
19498 <Iteration_stat>
|
jpayne@1
|
19499 <Statistics>
|
jpayne@1
|
19500 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19501 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19502 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19503 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19504 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19505 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19506 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19507 </Statistics>
|
jpayne@1
|
19508 </Iteration_stat>
|
jpayne@1
|
19509 </Iteration>
|
jpayne@1
|
19510 <Iteration>
|
jpayne@1
|
19511 <Iteration_iter-num>384</Iteration_iter-num>
|
jpayne@1
|
19512 <Iteration_query-ID>Query_384</Iteration_query-ID>
|
jpayne@1
|
19513 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALHY01000185_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19514 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19515 <Iteration_hits>
|
jpayne@1
|
19516 <Hit>
|
jpayne@1
|
19517 <Hit_num>1</Hit_num>
|
jpayne@1
|
19518 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19519 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19520 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19521 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19522 <Hit_hsps>
|
jpayne@1
|
19523 <Hsp>
|
jpayne@1
|
19524 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19525 <Hsp_bit-score>2571.66</Hsp_bit-score>
|
jpayne@1
|
19526 <Hsp_score>1392</Hsp_score>
|
jpayne@1
|
19527 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19528 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19529 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19530 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19531 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19532 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19533 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19534 <Hsp_identity>1468</Hsp_identity>
|
jpayne@1
|
19535 <Hsp_positive>1468</Hsp_positive>
|
jpayne@1
|
19536 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19537 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19538 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGTTTCACGTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTAGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19539 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19540 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || || | || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19541 </Hsp>
|
jpayne@1
|
19542 </Hit_hsps>
|
jpayne@1
|
19543 </Hit>
|
jpayne@1
|
19544 </Iteration_hits>
|
jpayne@1
|
19545 <Iteration_stat>
|
jpayne@1
|
19546 <Statistics>
|
jpayne@1
|
19547 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19548 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19549 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19550 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19551 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19552 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19553 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19554 </Statistics>
|
jpayne@1
|
19555 </Iteration_stat>
|
jpayne@1
|
19556 </Iteration>
|
jpayne@1
|
19557 <Iteration>
|
jpayne@1
|
19558 <Iteration_iter-num>385</Iteration_iter-num>
|
jpayne@1
|
19559 <Iteration_query-ID>Query_385</Iteration_query-ID>
|
jpayne@1
|
19560 <Iteration_query-def>fliC_g,m_Enteritidisstr_AHUN01000143_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19561 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19562 <Iteration_hits>
|
jpayne@1
|
19563 <Hit>
|
jpayne@1
|
19564 <Hit_num>1</Hit_num>
|
jpayne@1
|
19565 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19566 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19567 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19568 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19569 <Hit_hsps>
|
jpayne@1
|
19570 <Hsp>
|
jpayne@1
|
19571 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19572 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19573 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19574 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19575 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19576 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19577 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19578 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19579 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19580 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19581 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19582 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19583 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19584 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19585 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19586 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19587 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19588 </Hsp>
|
jpayne@1
|
19589 </Hit_hsps>
|
jpayne@1
|
19590 </Hit>
|
jpayne@1
|
19591 </Iteration_hits>
|
jpayne@1
|
19592 <Iteration_stat>
|
jpayne@1
|
19593 <Statistics>
|
jpayne@1
|
19594 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19595 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19596 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19597 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19598 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19599 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19600 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19601 </Statistics>
|
jpayne@1
|
19602 </Iteration_stat>
|
jpayne@1
|
19603 </Iteration>
|
jpayne@1
|
19604 <Iteration>
|
jpayne@1
|
19605 <Iteration_iter-num>386</Iteration_iter-num>
|
jpayne@1
|
19606 <Iteration_query-ID>Query_386</Iteration_query-ID>
|
jpayne@1
|
19607 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGR01000023_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19608 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19609 <Iteration_hits>
|
jpayne@1
|
19610 <Hit>
|
jpayne@1
|
19611 <Hit_num>1</Hit_num>
|
jpayne@1
|
19612 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19613 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19614 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19615 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19616 <Hit_hsps>
|
jpayne@1
|
19617 <Hsp>
|
jpayne@1
|
19618 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19619 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19620 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19621 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19622 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19623 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19624 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19625 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19626 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19627 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19628 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19629 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19630 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19631 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19632 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19633 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19634 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19635 </Hsp>
|
jpayne@1
|
19636 </Hit_hsps>
|
jpayne@1
|
19637 </Hit>
|
jpayne@1
|
19638 </Iteration_hits>
|
jpayne@1
|
19639 <Iteration_stat>
|
jpayne@1
|
19640 <Statistics>
|
jpayne@1
|
19641 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19642 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19643 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19644 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19645 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19646 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19647 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19648 </Statistics>
|
jpayne@1
|
19649 </Iteration_stat>
|
jpayne@1
|
19650 </Iteration>
|
jpayne@1
|
19651 <Iteration>
|
jpayne@1
|
19652 <Iteration_iter-num>387</Iteration_iter-num>
|
jpayne@1
|
19653 <Iteration_query-ID>Query_387</Iteration_query-ID>
|
jpayne@1
|
19654 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALFE01000865_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19655 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19656 <Iteration_hits>
|
jpayne@1
|
19657 <Hit>
|
jpayne@1
|
19658 <Hit_num>1</Hit_num>
|
jpayne@1
|
19659 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19660 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19661 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19662 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19663 <Hit_hsps>
|
jpayne@1
|
19664 <Hsp>
|
jpayne@1
|
19665 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19666 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19667 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19668 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19669 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19670 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19671 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19672 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19673 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19674 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19675 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19676 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19677 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19678 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19679 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19680 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19681 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19682 </Hsp>
|
jpayne@1
|
19683 </Hit_hsps>
|
jpayne@1
|
19684 </Hit>
|
jpayne@1
|
19685 </Iteration_hits>
|
jpayne@1
|
19686 <Iteration_stat>
|
jpayne@1
|
19687 <Statistics>
|
jpayne@1
|
19688 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19689 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19690 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19691 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19692 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19693 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19694 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19695 </Statistics>
|
jpayne@1
|
19696 </Iteration_stat>
|
jpayne@1
|
19697 </Iteration>
|
jpayne@1
|
19698 <Iteration>
|
jpayne@1
|
19699 <Iteration_iter-num>388</Iteration_iter-num>
|
jpayne@1
|
19700 <Iteration_query-ID>Query_388</Iteration_query-ID>
|
jpayne@1
|
19701 <Iteration_query-def>fliC_g,m_Enteritidisstr_AHUL01000064_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19702 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19703 <Iteration_hits>
|
jpayne@1
|
19704 <Hit>
|
jpayne@1
|
19705 <Hit_num>1</Hit_num>
|
jpayne@1
|
19706 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19707 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19708 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19709 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19710 <Hit_hsps>
|
jpayne@1
|
19711 <Hsp>
|
jpayne@1
|
19712 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19713 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19714 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19715 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19716 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19717 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19718 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19719 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19720 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19721 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19722 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19723 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19724 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19725 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19726 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19727 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19728 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19729 </Hsp>
|
jpayne@1
|
19730 </Hit_hsps>
|
jpayne@1
|
19731 </Hit>
|
jpayne@1
|
19732 </Iteration_hits>
|
jpayne@1
|
19733 <Iteration_stat>
|
jpayne@1
|
19734 <Statistics>
|
jpayne@1
|
19735 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19736 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19737 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19738 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19739 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19740 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19741 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19742 </Statistics>
|
jpayne@1
|
19743 </Iteration_stat>
|
jpayne@1
|
19744 </Iteration>
|
jpayne@1
|
19745 <Iteration>
|
jpayne@1
|
19746 <Iteration_iter-num>389</Iteration_iter-num>
|
jpayne@1
|
19747 <Iteration_query-ID>Query_389</Iteration_query-ID>
|
jpayne@1
|
19748 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGX01000033_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19749 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19750 <Iteration_hits>
|
jpayne@1
|
19751 <Hit>
|
jpayne@1
|
19752 <Hit_num>1</Hit_num>
|
jpayne@1
|
19753 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19754 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19755 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19756 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19757 <Hit_hsps>
|
jpayne@1
|
19758 <Hsp>
|
jpayne@1
|
19759 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19760 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19761 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19762 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19763 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19764 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19765 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19766 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19767 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19768 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19769 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19770 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19771 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19772 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19773 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19774 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19775 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19776 </Hsp>
|
jpayne@1
|
19777 </Hit_hsps>
|
jpayne@1
|
19778 </Hit>
|
jpayne@1
|
19779 </Iteration_hits>
|
jpayne@1
|
19780 <Iteration_stat>
|
jpayne@1
|
19781 <Statistics>
|
jpayne@1
|
19782 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19783 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19784 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19785 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19786 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19787 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19788 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19789 </Statistics>
|
jpayne@1
|
19790 </Iteration_stat>
|
jpayne@1
|
19791 </Iteration>
|
jpayne@1
|
19792 <Iteration>
|
jpayne@1
|
19793 <Iteration_iter-num>390</Iteration_iter-num>
|
jpayne@1
|
19794 <Iteration_query-ID>Query_390</Iteration_query-ID>
|
jpayne@1
|
19795 <Iteration_query-def>fliC_g,m_Enteritidisstr_ALGY01000052_g,m__1506</Iteration_query-def>
|
jpayne@1
|
19796 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
19797 <Iteration_hits>
|
jpayne@1
|
19798 <Hit>
|
jpayne@1
|
19799 <Hit_num>1</Hit_num>
|
jpayne@1
|
19800 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19801 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19802 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19803 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19804 <Hit_hsps>
|
jpayne@1
|
19805 <Hsp>
|
jpayne@1
|
19806 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19807 <Hsp_bit-score>2588.28</Hsp_bit-score>
|
jpayne@1
|
19808 <Hsp_score>1401</Hsp_score>
|
jpayne@1
|
19809 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
19810 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19811 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
19812 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19813 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19814 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19815 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19816 <Hsp_identity>1471</Hsp_identity>
|
jpayne@1
|
19817 <Hsp_positive>1471</Hsp_positive>
|
jpayne@1
|
19818 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19819 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
19820 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGATCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAAGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19821 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19822 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| |||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| | || || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||| ||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19823 </Hsp>
|
jpayne@1
|
19824 </Hit_hsps>
|
jpayne@1
|
19825 </Hit>
|
jpayne@1
|
19826 </Iteration_hits>
|
jpayne@1
|
19827 <Iteration_stat>
|
jpayne@1
|
19828 <Statistics>
|
jpayne@1
|
19829 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19830 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19831 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19832 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
19833 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19834 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19835 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19836 </Statistics>
|
jpayne@1
|
19837 </Iteration_stat>
|
jpayne@1
|
19838 </Iteration>
|
jpayne@1
|
19839 <Iteration>
|
jpayne@1
|
19840 <Iteration_iter-num>391</Iteration_iter-num>
|
jpayne@1
|
19841 <Iteration_query-ID>Query_391</Iteration_query-ID>
|
jpayne@1
|
19842 <Iteration_query-def>fliC_z10_Hadarstr_ALPP01000007_other.z10__1488</Iteration_query-def>
|
jpayne@1
|
19843 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
19844 <Iteration_hits>
|
jpayne@1
|
19845 <Hit>
|
jpayne@1
|
19846 <Hit_num>1</Hit_num>
|
jpayne@1
|
19847 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19848 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19849 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19850 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19851 <Hit_hsps>
|
jpayne@1
|
19852 <Hsp>
|
jpayne@1
|
19853 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19854 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
19855 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
19856 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
19857 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19858 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
19859 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19860 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
19861 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19862 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19863 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
19864 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
19865 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
19866 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
19867 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
19868 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
19869 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
19870 </Hsp>
|
jpayne@1
|
19871 <Hsp>
|
jpayne@1
|
19872 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
19873 <Hsp_bit-score>196.865</Hsp_bit-score>
|
jpayne@1
|
19874 <Hsp_score>106</Hsp_score>
|
jpayne@1
|
19875 <Hsp_evalue>4.39497e-52</Hsp_evalue>
|
jpayne@1
|
19876 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
19877 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
19878 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
19879 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19880 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19881 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19882 <Hsp_identity>198</Hsp_identity>
|
jpayne@1
|
19883 <Hsp_positive>198</Hsp_positive>
|
jpayne@1
|
19884 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19885 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
19886 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19887 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19888 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19889 </Hsp>
|
jpayne@1
|
19890 </Hit_hsps>
|
jpayne@1
|
19891 </Hit>
|
jpayne@1
|
19892 </Iteration_hits>
|
jpayne@1
|
19893 <Iteration_stat>
|
jpayne@1
|
19894 <Statistics>
|
jpayne@1
|
19895 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19896 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19897 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19898 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
19899 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19900 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19901 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19902 </Statistics>
|
jpayne@1
|
19903 </Iteration_stat>
|
jpayne@1
|
19904 </Iteration>
|
jpayne@1
|
19905 <Iteration>
|
jpayne@1
|
19906 <Iteration_iter-num>392</Iteration_iter-num>
|
jpayne@1
|
19907 <Iteration_query-ID>Query_392</Iteration_query-ID>
|
jpayne@1
|
19908 <Iteration_query-def>fliC_z10_Hadarstr_ARYR01000061_other.z10__1488</Iteration_query-def>
|
jpayne@1
|
19909 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
19910 <Iteration_hits>
|
jpayne@1
|
19911 <Hit>
|
jpayne@1
|
19912 <Hit_num>1</Hit_num>
|
jpayne@1
|
19913 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19914 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19915 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19916 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19917 <Hit_hsps>
|
jpayne@1
|
19918 <Hsp>
|
jpayne@1
|
19919 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19920 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
19921 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
19922 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
19923 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19924 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
19925 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19926 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
19927 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19928 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19929 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
19930 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
19931 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
19932 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
19933 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
19934 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
19935 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
19936 </Hsp>
|
jpayne@1
|
19937 <Hsp>
|
jpayne@1
|
19938 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
19939 <Hsp_bit-score>196.865</Hsp_bit-score>
|
jpayne@1
|
19940 <Hsp_score>106</Hsp_score>
|
jpayne@1
|
19941 <Hsp_evalue>4.39497e-52</Hsp_evalue>
|
jpayne@1
|
19942 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
19943 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
19944 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
19945 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
19946 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19947 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19948 <Hsp_identity>198</Hsp_identity>
|
jpayne@1
|
19949 <Hsp_positive>198</Hsp_positive>
|
jpayne@1
|
19950 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
19951 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
19952 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
19953 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
19954 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
19955 </Hsp>
|
jpayne@1
|
19956 </Hit_hsps>
|
jpayne@1
|
19957 </Hit>
|
jpayne@1
|
19958 </Iteration_hits>
|
jpayne@1
|
19959 <Iteration_stat>
|
jpayne@1
|
19960 <Statistics>
|
jpayne@1
|
19961 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
19962 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
19963 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
19964 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
19965 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
19966 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
19967 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
19968 </Statistics>
|
jpayne@1
|
19969 </Iteration_stat>
|
jpayne@1
|
19970 </Iteration>
|
jpayne@1
|
19971 <Iteration>
|
jpayne@1
|
19972 <Iteration_iter-num>393</Iteration_iter-num>
|
jpayne@1
|
19973 <Iteration_query-ID>Query_393</Iteration_query-ID>
|
jpayne@1
|
19974 <Iteration_query-def>fliC_z10_Hadarstr_AOZE01000026_other.z10__1488</Iteration_query-def>
|
jpayne@1
|
19975 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
19976 <Iteration_hits>
|
jpayne@1
|
19977 <Hit>
|
jpayne@1
|
19978 <Hit_num>1</Hit_num>
|
jpayne@1
|
19979 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
19980 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
19981 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
19982 <Hit_len>1962</Hit_len>
|
jpayne@1
|
19983 <Hit_hsps>
|
jpayne@1
|
19984 <Hsp>
|
jpayne@1
|
19985 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
19986 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
19987 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
19988 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
19989 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
19990 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
19991 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
19992 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
19993 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
19994 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
19995 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
19996 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
19997 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
19998 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
19999 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20000 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20001 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
20002 </Hsp>
|
jpayne@1
|
20003 <Hsp>
|
jpayne@1
|
20004 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20005 <Hsp_bit-score>196.865</Hsp_bit-score>
|
jpayne@1
|
20006 <Hsp_score>106</Hsp_score>
|
jpayne@1
|
20007 <Hsp_evalue>4.39497e-52</Hsp_evalue>
|
jpayne@1
|
20008 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
20009 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
20010 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20011 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20012 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20013 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20014 <Hsp_identity>198</Hsp_identity>
|
jpayne@1
|
20015 <Hsp_positive>198</Hsp_positive>
|
jpayne@1
|
20016 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
20017 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
20018 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20019 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20020 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20021 </Hsp>
|
jpayne@1
|
20022 </Hit_hsps>
|
jpayne@1
|
20023 </Hit>
|
jpayne@1
|
20024 </Iteration_hits>
|
jpayne@1
|
20025 <Iteration_stat>
|
jpayne@1
|
20026 <Statistics>
|
jpayne@1
|
20027 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20028 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20029 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20030 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
20031 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20032 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20033 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20034 </Statistics>
|
jpayne@1
|
20035 </Iteration_stat>
|
jpayne@1
|
20036 </Iteration>
|
jpayne@1
|
20037 <Iteration>
|
jpayne@1
|
20038 <Iteration_iter-num>394</Iteration_iter-num>
|
jpayne@1
|
20039 <Iteration_query-ID>Query_394</Iteration_query-ID>
|
jpayne@1
|
20040 <Iteration_query-def>fliC_z10_Hadarstr_ABFG01000001_other.z10__1488</Iteration_query-def>
|
jpayne@1
|
20041 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
20042 <Iteration_hits>
|
jpayne@1
|
20043 <Hit>
|
jpayne@1
|
20044 <Hit_num>1</Hit_num>
|
jpayne@1
|
20045 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20046 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20047 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20048 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20049 <Hit_hsps>
|
jpayne@1
|
20050 <Hsp>
|
jpayne@1
|
20051 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20052 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
20053 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
20054 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
20055 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20056 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20057 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20058 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20059 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20060 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20061 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
20062 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
20063 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20064 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20065 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20066 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20067 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
20068 </Hsp>
|
jpayne@1
|
20069 <Hsp>
|
jpayne@1
|
20070 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20071 <Hsp_bit-score>196.865</Hsp_bit-score>
|
jpayne@1
|
20072 <Hsp_score>106</Hsp_score>
|
jpayne@1
|
20073 <Hsp_evalue>4.39497e-52</Hsp_evalue>
|
jpayne@1
|
20074 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
20075 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
20076 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20077 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20078 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20079 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20080 <Hsp_identity>198</Hsp_identity>
|
jpayne@1
|
20081 <Hsp_positive>198</Hsp_positive>
|
jpayne@1
|
20082 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
20083 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
20084 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20085 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20086 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20087 </Hsp>
|
jpayne@1
|
20088 </Hit_hsps>
|
jpayne@1
|
20089 </Hit>
|
jpayne@1
|
20090 </Iteration_hits>
|
jpayne@1
|
20091 <Iteration_stat>
|
jpayne@1
|
20092 <Statistics>
|
jpayne@1
|
20093 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20094 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20095 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20096 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
20097 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20098 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20099 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20100 </Statistics>
|
jpayne@1
|
20101 </Iteration_stat>
|
jpayne@1
|
20102 </Iteration>
|
jpayne@1
|
20103 <Iteration>
|
jpayne@1
|
20104 <Iteration_iter-num>395</Iteration_iter-num>
|
jpayne@1
|
20105 <Iteration_query-ID>Query_395</Iteration_query-ID>
|
jpayne@1
|
20106 <Iteration_query-def>fliC_y_Hartfordstr_ALPO01000014_other.y__1509</Iteration_query-def>
|
jpayne@1
|
20107 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
20108 <Iteration_hits>
|
jpayne@1
|
20109 <Hit>
|
jpayne@1
|
20110 <Hit_num>1</Hit_num>
|
jpayne@1
|
20111 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20112 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20113 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20114 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20115 <Hit_hsps>
|
jpayne@1
|
20116 <Hsp>
|
jpayne@1
|
20117 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20118 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
20119 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
20120 <Hsp_evalue>6.61412e-135</Hsp_evalue>
|
jpayne@1
|
20121 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20122 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20123 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20124 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20125 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20126 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20127 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
20128 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
20129 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20130 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20131 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20132 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20133 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
20134 </Hsp>
|
jpayne@1
|
20135 <Hsp>
|
jpayne@1
|
20136 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20137 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
20138 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
20139 <Hsp_evalue>3.42176e-58</Hsp_evalue>
|
jpayne@1
|
20140 <Hsp_query-from>1252</Hsp_query-from>
|
jpayne@1
|
20141 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
20142 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
20143 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20144 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20145 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20146 <Hsp_identity>211</Hsp_identity>
|
jpayne@1
|
20147 <Hsp_positive>211</Hsp_positive>
|
jpayne@1
|
20148 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
20149 <Hsp_align-len>258</Hsp_align-len>
|
jpayne@1
|
20150 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20151 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20152 <Hsp_midline>||||| |||||| ||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20153 </Hsp>
|
jpayne@1
|
20154 </Hit_hsps>
|
jpayne@1
|
20155 </Hit>
|
jpayne@1
|
20156 </Iteration_hits>
|
jpayne@1
|
20157 <Iteration_stat>
|
jpayne@1
|
20158 <Statistics>
|
jpayne@1
|
20159 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20160 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20161 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20162 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
20163 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20164 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20165 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20166 </Statistics>
|
jpayne@1
|
20167 </Iteration_stat>
|
jpayne@1
|
20168 </Iteration>
|
jpayne@1
|
20169 <Iteration>
|
jpayne@1
|
20170 <Iteration_iter-num>396</Iteration_iter-num>
|
jpayne@1
|
20171 <Iteration_query-ID>Query_396</Iteration_query-ID>
|
jpayne@1
|
20172 <Iteration_query-def>fliC_f,g_Havanastr_APAH01000011_g,m__1506</Iteration_query-def>
|
jpayne@1
|
20173 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
20174 <Iteration_hits>
|
jpayne@1
|
20175 <Hit>
|
jpayne@1
|
20176 <Hit_num>1</Hit_num>
|
jpayne@1
|
20177 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20178 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20179 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20180 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20181 <Hit_hsps>
|
jpayne@1
|
20182 <Hsp>
|
jpayne@1
|
20183 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20184 <Hsp_bit-score>2577.2</Hsp_bit-score>
|
jpayne@1
|
20185 <Hsp_score>1395</Hsp_score>
|
jpayne@1
|
20186 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
20187 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20188 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
20189 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20190 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20191 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20192 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20193 <Hsp_identity>1469</Hsp_identity>
|
jpayne@1
|
20194 <Hsp_positive>1469</Hsp_positive>
|
jpayne@1
|
20195 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
20196 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
20197 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAGTCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGAATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGACCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGGTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTTTACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAAGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGGTCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20198 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20199 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20200 </Hsp>
|
jpayne@1
|
20201 </Hit_hsps>
|
jpayne@1
|
20202 </Hit>
|
jpayne@1
|
20203 </Iteration_hits>
|
jpayne@1
|
20204 <Iteration_stat>
|
jpayne@1
|
20205 <Statistics>
|
jpayne@1
|
20206 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20207 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20208 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20209 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
20210 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20211 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20212 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20213 </Statistics>
|
jpayne@1
|
20214 </Iteration_stat>
|
jpayne@1
|
20215 </Iteration>
|
jpayne@1
|
20216 <Iteration>
|
jpayne@1
|
20217 <Iteration_iter-num>397</Iteration_iter-num>
|
jpayne@1
|
20218 <Iteration_query-ID>Query_397</Iteration_query-ID>
|
jpayne@1
|
20219 <Iteration_query-def>fliC_r_Heidelbergstr_AJGW01000023_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20220 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20221 <Iteration_hits>
|
jpayne@1
|
20222 <Hit>
|
jpayne@1
|
20223 <Hit_num>1</Hit_num>
|
jpayne@1
|
20224 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20225 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20226 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20227 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20228 <Hit_hsps>
|
jpayne@1
|
20229 <Hsp>
|
jpayne@1
|
20230 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20231 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20232 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20233 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20234 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20235 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20236 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20237 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20238 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20239 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20240 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20241 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20242 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20243 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20244 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20245 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20246 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20247 </Hsp>
|
jpayne@1
|
20248 <Hsp>
|
jpayne@1
|
20249 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20250 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
20251 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
20252 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
20253 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
20254 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
20255 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20256 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20257 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20258 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20259 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
20260 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
20261 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20262 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
20263 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20264 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20265 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20266 </Hsp>
|
jpayne@1
|
20267 </Hit_hsps>
|
jpayne@1
|
20268 </Hit>
|
jpayne@1
|
20269 </Iteration_hits>
|
jpayne@1
|
20270 <Iteration_stat>
|
jpayne@1
|
20271 <Statistics>
|
jpayne@1
|
20272 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20273 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20274 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20275 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20276 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20277 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20278 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20279 </Statistics>
|
jpayne@1
|
20280 </Iteration_stat>
|
jpayne@1
|
20281 </Iteration>
|
jpayne@1
|
20282 <Iteration>
|
jpayne@1
|
20283 <Iteration_iter-num>398</Iteration_iter-num>
|
jpayne@1
|
20284 <Iteration_query-ID>Query_398</Iteration_query-ID>
|
jpayne@1
|
20285 <Iteration_query-def>fliC_r_Heidelbergstr_AMMX01000026_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20286 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20287 <Iteration_hits>
|
jpayne@1
|
20288 <Hit>
|
jpayne@1
|
20289 <Hit_num>1</Hit_num>
|
jpayne@1
|
20290 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20291 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20292 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20293 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20294 <Hit_hsps>
|
jpayne@1
|
20295 <Hsp>
|
jpayne@1
|
20296 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20297 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20298 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20299 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20300 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20301 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20302 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20303 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20304 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20305 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20306 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20307 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20308 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20309 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20310 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20311 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20312 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20313 </Hsp>
|
jpayne@1
|
20314 <Hsp>
|
jpayne@1
|
20315 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20316 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
20317 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
20318 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
20319 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
20320 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
20321 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20322 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20323 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20324 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20325 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
20326 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
20327 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20328 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
20329 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20330 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20331 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20332 </Hsp>
|
jpayne@1
|
20333 </Hit_hsps>
|
jpayne@1
|
20334 </Hit>
|
jpayne@1
|
20335 </Iteration_hits>
|
jpayne@1
|
20336 <Iteration_stat>
|
jpayne@1
|
20337 <Statistics>
|
jpayne@1
|
20338 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20339 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20340 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20341 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20342 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20343 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20344 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20345 </Statistics>
|
jpayne@1
|
20346 </Iteration_stat>
|
jpayne@1
|
20347 </Iteration>
|
jpayne@1
|
20348 <Iteration>
|
jpayne@1
|
20349 <Iteration_iter-num>399</Iteration_iter-num>
|
jpayne@1
|
20350 <Iteration_query-ID>Query_399</Iteration_query-ID>
|
jpayne@1
|
20351 <Iteration_query-def>fliC_r_Heidelbergstr_AMBU01000009_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20352 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20353 <Iteration_hits>
|
jpayne@1
|
20354 <Hit>
|
jpayne@1
|
20355 <Hit_num>1</Hit_num>
|
jpayne@1
|
20356 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20357 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20358 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20359 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20360 <Hit_hsps>
|
jpayne@1
|
20361 <Hsp>
|
jpayne@1
|
20362 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20363 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20364 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20365 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20366 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20367 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20368 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20369 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20370 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20371 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20372 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20373 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20374 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20375 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20376 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20377 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20378 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20379 </Hsp>
|
jpayne@1
|
20380 <Hsp>
|
jpayne@1
|
20381 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20382 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
20383 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
20384 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
20385 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
20386 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
20387 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20388 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20389 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20390 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20391 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
20392 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
20393 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20394 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
20395 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20396 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20397 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20398 </Hsp>
|
jpayne@1
|
20399 </Hit_hsps>
|
jpayne@1
|
20400 </Hit>
|
jpayne@1
|
20401 </Iteration_hits>
|
jpayne@1
|
20402 <Iteration_stat>
|
jpayne@1
|
20403 <Statistics>
|
jpayne@1
|
20404 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20405 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20406 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20407 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20408 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20409 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20410 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20411 </Statistics>
|
jpayne@1
|
20412 </Iteration_stat>
|
jpayne@1
|
20413 </Iteration>
|
jpayne@1
|
20414 <Iteration>
|
jpayne@1
|
20415 <Iteration_iter-num>400</Iteration_iter-num>
|
jpayne@1
|
20416 <Iteration_query-ID>Query_400</Iteration_query-ID>
|
jpayne@1
|
20417 <Iteration_query-def>fliC_r_Heidelbergstr_AMBV01000021_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20418 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20419 <Iteration_hits>
|
jpayne@1
|
20420 <Hit>
|
jpayne@1
|
20421 <Hit_num>1</Hit_num>
|
jpayne@1
|
20422 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20423 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20424 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20425 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20426 <Hit_hsps>
|
jpayne@1
|
20427 <Hsp>
|
jpayne@1
|
20428 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20429 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20430 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20431 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20432 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20433 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20434 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20435 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20436 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20437 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20438 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20439 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20440 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20441 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20442 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20443 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20444 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20445 </Hsp>
|
jpayne@1
|
20446 <Hsp>
|
jpayne@1
|
20447 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20448 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
20449 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
20450 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
20451 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
20452 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
20453 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20454 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20455 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20456 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20457 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
20458 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
20459 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20460 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
20461 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20462 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20463 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20464 </Hsp>
|
jpayne@1
|
20465 </Hit_hsps>
|
jpayne@1
|
20466 </Hit>
|
jpayne@1
|
20467 </Iteration_hits>
|
jpayne@1
|
20468 <Iteration_stat>
|
jpayne@1
|
20469 <Statistics>
|
jpayne@1
|
20470 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20471 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20472 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20473 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20474 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20475 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20476 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20477 </Statistics>
|
jpayne@1
|
20478 </Iteration_stat>
|
jpayne@1
|
20479 </Iteration>
|
jpayne@1
|
20480 <Iteration>
|
jpayne@1
|
20481 <Iteration_iter-num>401</Iteration_iter-num>
|
jpayne@1
|
20482 <Iteration_query-ID>Query_401</Iteration_query-ID>
|
jpayne@1
|
20483 <Iteration_query-def>fliC_r_Heidelbergstr_AMBW01000024_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20484 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20485 <Iteration_hits>
|
jpayne@1
|
20486 <Hit>
|
jpayne@1
|
20487 <Hit_num>1</Hit_num>
|
jpayne@1
|
20488 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20489 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20490 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20491 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20492 <Hit_hsps>
|
jpayne@1
|
20493 <Hsp>
|
jpayne@1
|
20494 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20495 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20496 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20497 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20498 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20499 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20500 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20501 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20502 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20503 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20504 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20505 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20506 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20507 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20508 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20509 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20510 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20511 </Hsp>
|
jpayne@1
|
20512 <Hsp>
|
jpayne@1
|
20513 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20514 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
20515 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
20516 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
20517 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
20518 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
20519 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20520 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20521 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20522 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20523 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
20524 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
20525 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20526 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
20527 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20528 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20529 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20530 </Hsp>
|
jpayne@1
|
20531 </Hit_hsps>
|
jpayne@1
|
20532 </Hit>
|
jpayne@1
|
20533 </Iteration_hits>
|
jpayne@1
|
20534 <Iteration_stat>
|
jpayne@1
|
20535 <Statistics>
|
jpayne@1
|
20536 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20537 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20538 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20539 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20540 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20541 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20542 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20543 </Statistics>
|
jpayne@1
|
20544 </Iteration_stat>
|
jpayne@1
|
20545 </Iteration>
|
jpayne@1
|
20546 <Iteration>
|
jpayne@1
|
20547 <Iteration_iter-num>402</Iteration_iter-num>
|
jpayne@1
|
20548 <Iteration_query-ID>Query_402</Iteration_query-ID>
|
jpayne@1
|
20549 <Iteration_query-def>fliC_r_Heidelbergstr_AMBX01000033_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20550 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20551 <Iteration_hits>
|
jpayne@1
|
20552 <Hit>
|
jpayne@1
|
20553 <Hit_num>1</Hit_num>
|
jpayne@1
|
20554 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20555 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20556 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20557 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20558 <Hit_hsps>
|
jpayne@1
|
20559 <Hsp>
|
jpayne@1
|
20560 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20561 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20562 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20563 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20564 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20565 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20566 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20567 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20568 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20569 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20570 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20571 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20572 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20573 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20574 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20575 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20576 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20577 </Hsp>
|
jpayne@1
|
20578 <Hsp>
|
jpayne@1
|
20579 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20580 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
20581 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
20582 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
20583 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
20584 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
20585 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20586 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20587 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20588 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20589 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
20590 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
20591 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20592 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
20593 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20594 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20595 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20596 </Hsp>
|
jpayne@1
|
20597 </Hit_hsps>
|
jpayne@1
|
20598 </Hit>
|
jpayne@1
|
20599 </Iteration_hits>
|
jpayne@1
|
20600 <Iteration_stat>
|
jpayne@1
|
20601 <Statistics>
|
jpayne@1
|
20602 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20603 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20604 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20605 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20606 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20607 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20608 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20609 </Statistics>
|
jpayne@1
|
20610 </Iteration_stat>
|
jpayne@1
|
20611 </Iteration>
|
jpayne@1
|
20612 <Iteration>
|
jpayne@1
|
20613 <Iteration_iter-num>403</Iteration_iter-num>
|
jpayne@1
|
20614 <Iteration_query-ID>Query_403</Iteration_query-ID>
|
jpayne@1
|
20615 <Iteration_query-def>fliC_r_Heidelbergstr_AMLT01000023_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20616 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20617 <Iteration_hits>
|
jpayne@1
|
20618 <Hit>
|
jpayne@1
|
20619 <Hit_num>1</Hit_num>
|
jpayne@1
|
20620 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20621 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20622 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20623 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20624 <Hit_hsps>
|
jpayne@1
|
20625 <Hsp>
|
jpayne@1
|
20626 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20627 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20628 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20629 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20630 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20631 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20632 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20633 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20634 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20635 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20636 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20637 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20638 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20639 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20640 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20641 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20642 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20643 </Hsp>
|
jpayne@1
|
20644 <Hsp>
|
jpayne@1
|
20645 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20646 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
20647 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
20648 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
20649 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
20650 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
20651 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20652 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20653 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20654 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20655 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
20656 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
20657 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20658 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
20659 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20660 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20661 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20662 </Hsp>
|
jpayne@1
|
20663 </Hit_hsps>
|
jpayne@1
|
20664 </Hit>
|
jpayne@1
|
20665 </Iteration_hits>
|
jpayne@1
|
20666 <Iteration_stat>
|
jpayne@1
|
20667 <Statistics>
|
jpayne@1
|
20668 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20669 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20670 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20671 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20672 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20673 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20674 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20675 </Statistics>
|
jpayne@1
|
20676 </Iteration_stat>
|
jpayne@1
|
20677 </Iteration>
|
jpayne@1
|
20678 <Iteration>
|
jpayne@1
|
20679 <Iteration_iter-num>404</Iteration_iter-num>
|
jpayne@1
|
20680 <Iteration_query-ID>Query_404</Iteration_query-ID>
|
jpayne@1
|
20681 <Iteration_query-def>fliC_r_Heidelbergstr_ABEL01000019_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20682 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20683 <Iteration_hits>
|
jpayne@1
|
20684 <Hit>
|
jpayne@1
|
20685 <Hit_num>1</Hit_num>
|
jpayne@1
|
20686 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20687 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20688 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20689 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20690 <Hit_hsps>
|
jpayne@1
|
20691 <Hsp>
|
jpayne@1
|
20692 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20693 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20694 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20695 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20696 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20697 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20698 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20699 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20700 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20701 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20702 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20703 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20704 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20705 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20706 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20707 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20708 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20709 </Hsp>
|
jpayne@1
|
20710 <Hsp>
|
jpayne@1
|
20711 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20712 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
20713 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
20714 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
20715 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
20716 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
20717 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20718 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20719 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20720 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20721 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
20722 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
20723 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20724 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
20725 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20726 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20727 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20728 </Hsp>
|
jpayne@1
|
20729 </Hit_hsps>
|
jpayne@1
|
20730 </Hit>
|
jpayne@1
|
20731 </Iteration_hits>
|
jpayne@1
|
20732 <Iteration_stat>
|
jpayne@1
|
20733 <Statistics>
|
jpayne@1
|
20734 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20735 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20736 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20737 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20738 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20739 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20740 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20741 </Statistics>
|
jpayne@1
|
20742 </Iteration_stat>
|
jpayne@1
|
20743 </Iteration>
|
jpayne@1
|
20744 <Iteration>
|
jpayne@1
|
20745 <Iteration_iter-num>405</Iteration_iter-num>
|
jpayne@1
|
20746 <Iteration_query-ID>Query_405</Iteration_query-ID>
|
jpayne@1
|
20747 <Iteration_query-def>fliC_z_Indianastr_AOZC01000051_k,z__1488</Iteration_query-def>
|
jpayne@1
|
20748 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
20749 <Iteration_hits>
|
jpayne@1
|
20750 <Hit>
|
jpayne@1
|
20751 <Hit_num>1</Hit_num>
|
jpayne@1
|
20752 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20753 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20754 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20755 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20756 <Hit_hsps>
|
jpayne@1
|
20757 <Hsp>
|
jpayne@1
|
20758 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20759 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
20760 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
20761 <Hsp_evalue>3.03391e-133</Hsp_evalue>
|
jpayne@1
|
20762 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20763 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20764 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20765 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20766 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20767 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20768 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
20769 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
20770 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20771 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20772 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAATAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20773 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20774 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||| ||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20775 </Hsp>
|
jpayne@1
|
20776 <Hsp>
|
jpayne@1
|
20777 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20778 <Hsp_bit-score>189.479</Hsp_bit-score>
|
jpayne@1
|
20779 <Hsp_score>102</Hsp_score>
|
jpayne@1
|
20780 <Hsp_evalue>7.35433e-50</Hsp_evalue>
|
jpayne@1
|
20781 <Hsp_query-from>1300</Hsp_query-from>
|
jpayne@1
|
20782 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
20783 <Hsp_hit-from>426</Hsp_hit-from>
|
jpayne@1
|
20784 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20785 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20786 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20787 <Hsp_identity>161</Hsp_identity>
|
jpayne@1
|
20788 <Hsp_positive>161</Hsp_positive>
|
jpayne@1
|
20789 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20790 <Hsp_align-len>190</Hsp_align-len>
|
jpayne@1
|
20791 <Hsp_qseq>CAAAACCGTTTCAACTCCGCTATCACCAACTTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20792 <Hsp_hseq>CAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20793 <Hsp_midline>||||||||||| | || || || |||||| | |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20794 </Hsp>
|
jpayne@1
|
20795 </Hit_hsps>
|
jpayne@1
|
20796 </Hit>
|
jpayne@1
|
20797 </Iteration_hits>
|
jpayne@1
|
20798 <Iteration_stat>
|
jpayne@1
|
20799 <Statistics>
|
jpayne@1
|
20800 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20801 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20802 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20803 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
20804 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20805 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20806 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20807 </Statistics>
|
jpayne@1
|
20808 </Iteration_stat>
|
jpayne@1
|
20809 </Iteration>
|
jpayne@1
|
20810 <Iteration>
|
jpayne@1
|
20811 <Iteration_iter-num>406</Iteration_iter-num>
|
jpayne@1
|
20812 <Iteration_query-ID>Query_406</Iteration_query-ID>
|
jpayne@1
|
20813 <Iteration_query-def>fliC_r_Infantisstr_ASRF01000003_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20814 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20815 <Iteration_hits>
|
jpayne@1
|
20816 <Hit>
|
jpayne@1
|
20817 <Hit_num>1</Hit_num>
|
jpayne@1
|
20818 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20819 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20820 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20821 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20822 <Hit_hsps>
|
jpayne@1
|
20823 <Hsp>
|
jpayne@1
|
20824 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20825 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20826 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20827 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20828 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20829 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20830 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20831 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20832 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20833 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20834 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20835 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20836 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20837 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20838 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCTTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20839 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20840 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20841 </Hsp>
|
jpayne@1
|
20842 <Hsp>
|
jpayne@1
|
20843 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20844 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
20845 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
20846 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
20847 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
20848 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
20849 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20850 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20851 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20852 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20853 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
20854 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
20855 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20856 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
20857 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20858 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20859 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20860 </Hsp>
|
jpayne@1
|
20861 </Hit_hsps>
|
jpayne@1
|
20862 </Hit>
|
jpayne@1
|
20863 </Iteration_hits>
|
jpayne@1
|
20864 <Iteration_stat>
|
jpayne@1
|
20865 <Statistics>
|
jpayne@1
|
20866 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20867 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20868 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20869 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20870 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20871 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20872 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20873 </Statistics>
|
jpayne@1
|
20874 </Iteration_stat>
|
jpayne@1
|
20875 </Iteration>
|
jpayne@1
|
20876 <Iteration>
|
jpayne@1
|
20877 <Iteration_iter-num>407</Iteration_iter-num>
|
jpayne@1
|
20878 <Iteration_query-ID>Query_407</Iteration_query-ID>
|
jpayne@1
|
20879 <Iteration_query-def>fliC_r_Infantisstr_ATHK01000035_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20880 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20881 <Iteration_hits>
|
jpayne@1
|
20882 <Hit>
|
jpayne@1
|
20883 <Hit_num>1</Hit_num>
|
jpayne@1
|
20884 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20885 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20886 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20887 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20888 <Hit_hsps>
|
jpayne@1
|
20889 <Hsp>
|
jpayne@1
|
20890 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20891 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20892 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20893 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20894 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20895 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20896 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20897 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20898 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20899 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20900 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20901 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20902 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20903 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20904 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCTTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20905 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20906 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
20907 </Hsp>
|
jpayne@1
|
20908 <Hsp>
|
jpayne@1
|
20909 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
20910 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
20911 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
20912 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
20913 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
20914 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
20915 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
20916 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
20917 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20918 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20919 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
20920 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
20921 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20922 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
20923 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
20924 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
20925 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
20926 </Hsp>
|
jpayne@1
|
20927 </Hit_hsps>
|
jpayne@1
|
20928 </Hit>
|
jpayne@1
|
20929 </Iteration_hits>
|
jpayne@1
|
20930 <Iteration_stat>
|
jpayne@1
|
20931 <Statistics>
|
jpayne@1
|
20932 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20933 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20934 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20935 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20936 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20937 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20938 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20939 </Statistics>
|
jpayne@1
|
20940 </Iteration_stat>
|
jpayne@1
|
20941 </Iteration>
|
jpayne@1
|
20942 <Iteration>
|
jpayne@1
|
20943 <Iteration_iter-num>408</Iteration_iter-num>
|
jpayne@1
|
20944 <Iteration_query-ID>Query_408</Iteration_query-ID>
|
jpayne@1
|
20945 <Iteration_query-def>fliC_r_Infantisstr_AFYI01000002_r,i__1470</Iteration_query-def>
|
jpayne@1
|
20946 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
20947 <Iteration_hits>
|
jpayne@1
|
20948 <Hit>
|
jpayne@1
|
20949 <Hit_num>1</Hit_num>
|
jpayne@1
|
20950 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20951 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20952 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
20953 <Hit_len>1962</Hit_len>
|
jpayne@1
|
20954 <Hit_hsps>
|
jpayne@1
|
20955 <Hsp>
|
jpayne@1
|
20956 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
20957 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
20958 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
20959 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
20960 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
20961 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
20962 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
20963 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
20964 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
20965 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
20966 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
20967 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
20968 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
20969 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
20970 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
20971 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
20972 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
20973 </Hsp>
|
jpayne@1
|
20974 </Hit_hsps>
|
jpayne@1
|
20975 </Hit>
|
jpayne@1
|
20976 </Iteration_hits>
|
jpayne@1
|
20977 <Iteration_stat>
|
jpayne@1
|
20978 <Statistics>
|
jpayne@1
|
20979 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
20980 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
20981 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
20982 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
20983 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
20984 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
20985 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
20986 </Statistics>
|
jpayne@1
|
20987 </Iteration_stat>
|
jpayne@1
|
20988 </Iteration>
|
jpayne@1
|
20989 <Iteration>
|
jpayne@1
|
20990 <Iteration_iter-num>409</Iteration_iter-num>
|
jpayne@1
|
20991 <Iteration_query-ID>Query_409</Iteration_query-ID>
|
jpayne@1
|
20992 <Iteration_query-def>fliC_k_Invernessstr_AOZD01000019_k,z__1476</Iteration_query-def>
|
jpayne@1
|
20993 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
20994 <Iteration_hits>
|
jpayne@1
|
20995 <Hit>
|
jpayne@1
|
20996 <Hit_num>1</Hit_num>
|
jpayne@1
|
20997 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
20998 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
20999 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21000 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21001 <Hit_hsps>
|
jpayne@1
|
21002 <Hsp>
|
jpayne@1
|
21003 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21004 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
21005 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
21006 <Hsp_evalue>2.98793e-138</Hsp_evalue>
|
jpayne@1
|
21007 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21008 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21009 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21010 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21011 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21012 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21013 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
21014 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
21015 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21016 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21017 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21018 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21019 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21020 </Hsp>
|
jpayne@1
|
21021 <Hsp>
|
jpayne@1
|
21022 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21023 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
21024 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
21025 <Hsp_evalue>4.32836e-57</Hsp_evalue>
|
jpayne@1
|
21026 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21027 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21028 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21029 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21030 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21031 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21032 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
21033 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
21034 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
21035 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
21036 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21037 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21038 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21039 </Hsp>
|
jpayne@1
|
21040 </Hit_hsps>
|
jpayne@1
|
21041 </Hit>
|
jpayne@1
|
21042 </Iteration_hits>
|
jpayne@1
|
21043 <Iteration_stat>
|
jpayne@1
|
21044 <Statistics>
|
jpayne@1
|
21045 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21046 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21047 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21048 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21049 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21050 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21051 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21052 </Statistics>
|
jpayne@1
|
21053 </Iteration_stat>
|
jpayne@1
|
21054 </Iteration>
|
jpayne@1
|
21055 <Iteration>
|
jpayne@1
|
21056 <Iteration_iter-num>410</Iteration_iter-num>
|
jpayne@1
|
21057 <Iteration_query-ID>Query_410</Iteration_query-ID>
|
jpayne@1
|
21058 <Iteration_query-def>fliC_i_Kentuckystr_AYDR01000065_r,i__1476</Iteration_query-def>
|
jpayne@1
|
21059 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
21060 <Iteration_hits>
|
jpayne@1
|
21061 <Hit>
|
jpayne@1
|
21062 <Hit_num>1</Hit_num>
|
jpayne@1
|
21063 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21064 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21065 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21066 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21067 <Hit_hsps>
|
jpayne@1
|
21068 <Hsp>
|
jpayne@1
|
21069 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21070 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
21071 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
21072 <Hsp_evalue>1.08228e-132</Hsp_evalue>
|
jpayne@1
|
21073 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21074 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
21075 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21076 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
21077 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21078 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21079 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
21080 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
21081 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21082 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
21083 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
21084 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
21085 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
21086 </Hsp>
|
jpayne@1
|
21087 <Hsp>
|
jpayne@1
|
21088 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21089 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21090 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21091 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
21092 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21093 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21094 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21095 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21096 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21097 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21098 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
21099 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
21100 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21101 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
21102 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21103 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21104 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21105 </Hsp>
|
jpayne@1
|
21106 </Hit_hsps>
|
jpayne@1
|
21107 </Hit>
|
jpayne@1
|
21108 </Iteration_hits>
|
jpayne@1
|
21109 <Iteration_stat>
|
jpayne@1
|
21110 <Statistics>
|
jpayne@1
|
21111 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21112 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21113 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21114 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21115 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21116 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21117 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21118 </Statistics>
|
jpayne@1
|
21119 </Iteration_stat>
|
jpayne@1
|
21120 </Iteration>
|
jpayne@1
|
21121 <Iteration>
|
jpayne@1
|
21122 <Iteration_iter-num>411</Iteration_iter-num>
|
jpayne@1
|
21123 <Iteration_query-ID>Query_411</Iteration_query-ID>
|
jpayne@1
|
21124 <Iteration_query-def>fliC_i_Kentuckystr_AUQF01000095_r,i__1476</Iteration_query-def>
|
jpayne@1
|
21125 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
21126 <Iteration_hits>
|
jpayne@1
|
21127 <Hit>
|
jpayne@1
|
21128 <Hit_num>1</Hit_num>
|
jpayne@1
|
21129 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21130 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21131 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21132 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21133 <Hit_hsps>
|
jpayne@1
|
21134 <Hsp>
|
jpayne@1
|
21135 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21136 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
21137 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
21138 <Hsp_evalue>3.00914e-133</Hsp_evalue>
|
jpayne@1
|
21139 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21140 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21141 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21142 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21143 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21144 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21145 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
21146 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
21147 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21148 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21149 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21150 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21151 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21152 </Hsp>
|
jpayne@1
|
21153 <Hsp>
|
jpayne@1
|
21154 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21155 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21156 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21157 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
21158 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21159 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21160 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21161 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21162 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21163 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21164 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
21165 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
21166 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21167 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
21168 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21169 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21170 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21171 </Hsp>
|
jpayne@1
|
21172 </Hit_hsps>
|
jpayne@1
|
21173 </Hit>
|
jpayne@1
|
21174 </Iteration_hits>
|
jpayne@1
|
21175 <Iteration_stat>
|
jpayne@1
|
21176 <Statistics>
|
jpayne@1
|
21177 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21178 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21179 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21180 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21181 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21182 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21183 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21184 </Statistics>
|
jpayne@1
|
21185 </Iteration_stat>
|
jpayne@1
|
21186 </Iteration>
|
jpayne@1
|
21187 <Iteration>
|
jpayne@1
|
21188 <Iteration_iter-num>412</Iteration_iter-num>
|
jpayne@1
|
21189 <Iteration_query-ID>Query_412</Iteration_query-ID>
|
jpayne@1
|
21190 <Iteration_query-def>fliC_i_Kentuckystr_AUQJ01000023_r,i__1476</Iteration_query-def>
|
jpayne@1
|
21191 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
21192 <Iteration_hits>
|
jpayne@1
|
21193 <Hit>
|
jpayne@1
|
21194 <Hit_num>1</Hit_num>
|
jpayne@1
|
21195 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21196 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21197 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21198 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21199 <Hit_hsps>
|
jpayne@1
|
21200 <Hsp>
|
jpayne@1
|
21201 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21202 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
21203 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
21204 <Hsp_evalue>3.00914e-133</Hsp_evalue>
|
jpayne@1
|
21205 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21206 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21207 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21208 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21209 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21210 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21211 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
21212 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
21213 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21214 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21215 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21216 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21217 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21218 </Hsp>
|
jpayne@1
|
21219 <Hsp>
|
jpayne@1
|
21220 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21221 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21222 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21223 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
21224 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21225 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21226 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21227 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21228 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21229 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21230 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
21231 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
21232 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21233 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
21234 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21235 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21236 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21237 </Hsp>
|
jpayne@1
|
21238 </Hit_hsps>
|
jpayne@1
|
21239 </Hit>
|
jpayne@1
|
21240 </Iteration_hits>
|
jpayne@1
|
21241 <Iteration_stat>
|
jpayne@1
|
21242 <Statistics>
|
jpayne@1
|
21243 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21244 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21245 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21246 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21247 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21248 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21249 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21250 </Statistics>
|
jpayne@1
|
21251 </Iteration_stat>
|
jpayne@1
|
21252 </Iteration>
|
jpayne@1
|
21253 <Iteration>
|
jpayne@1
|
21254 <Iteration_iter-num>413</Iteration_iter-num>
|
jpayne@1
|
21255 <Iteration_query-ID>Query_413</Iteration_query-ID>
|
jpayne@1
|
21256 <Iteration_query-def>fliC_i_Kentuckystr_AUQH01000025_r,i__1476</Iteration_query-def>
|
jpayne@1
|
21257 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
21258 <Iteration_hits>
|
jpayne@1
|
21259 <Hit>
|
jpayne@1
|
21260 <Hit_num>1</Hit_num>
|
jpayne@1
|
21261 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21262 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21263 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21264 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21265 <Hit_hsps>
|
jpayne@1
|
21266 <Hsp>
|
jpayne@1
|
21267 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21268 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
21269 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
21270 <Hsp_evalue>3.00914e-133</Hsp_evalue>
|
jpayne@1
|
21271 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21272 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21273 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21274 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21275 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21276 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21277 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
21278 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
21279 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21280 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21281 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21282 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21283 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21284 </Hsp>
|
jpayne@1
|
21285 <Hsp>
|
jpayne@1
|
21286 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21287 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21288 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21289 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
21290 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21291 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21292 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21293 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21294 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21295 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21296 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
21297 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
21298 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21299 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
21300 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21301 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21302 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21303 </Hsp>
|
jpayne@1
|
21304 </Hit_hsps>
|
jpayne@1
|
21305 </Hit>
|
jpayne@1
|
21306 </Iteration_hits>
|
jpayne@1
|
21307 <Iteration_stat>
|
jpayne@1
|
21308 <Statistics>
|
jpayne@1
|
21309 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21310 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21311 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21312 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21313 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21314 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21315 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21316 </Statistics>
|
jpayne@1
|
21317 </Iteration_stat>
|
jpayne@1
|
21318 </Iteration>
|
jpayne@1
|
21319 <Iteration>
|
jpayne@1
|
21320 <Iteration_iter-num>414</Iteration_iter-num>
|
jpayne@1
|
21321 <Iteration_query-ID>Query_414</Iteration_query-ID>
|
jpayne@1
|
21322 <Iteration_query-def>fliC_i_Kentuckystr_AUQG01000079_r,i__1476</Iteration_query-def>
|
jpayne@1
|
21323 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
21324 <Iteration_hits>
|
jpayne@1
|
21325 <Hit>
|
jpayne@1
|
21326 <Hit_num>1</Hit_num>
|
jpayne@1
|
21327 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21328 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21329 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21330 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21331 <Hit_hsps>
|
jpayne@1
|
21332 <Hsp>
|
jpayne@1
|
21333 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21334 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
21335 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
21336 <Hsp_evalue>3.00914e-133</Hsp_evalue>
|
jpayne@1
|
21337 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21338 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21339 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21340 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21341 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21342 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21343 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
21344 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
21345 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21346 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21347 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21348 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21349 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21350 </Hsp>
|
jpayne@1
|
21351 <Hsp>
|
jpayne@1
|
21352 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21353 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21354 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21355 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
21356 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21357 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21358 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21359 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21360 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21361 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21362 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
21363 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
21364 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21365 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
21366 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21367 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21368 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21369 </Hsp>
|
jpayne@1
|
21370 </Hit_hsps>
|
jpayne@1
|
21371 </Hit>
|
jpayne@1
|
21372 </Iteration_hits>
|
jpayne@1
|
21373 <Iteration_stat>
|
jpayne@1
|
21374 <Statistics>
|
jpayne@1
|
21375 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21376 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21377 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21378 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21379 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21380 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21381 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21382 </Statistics>
|
jpayne@1
|
21383 </Iteration_stat>
|
jpayne@1
|
21384 </Iteration>
|
jpayne@1
|
21385 <Iteration>
|
jpayne@1
|
21386 <Iteration_iter-num>415</Iteration_iter-num>
|
jpayne@1
|
21387 <Iteration_query-ID>Query_415</Iteration_query-ID>
|
jpayne@1
|
21388 <Iteration_query-def>fliC_i_Kentuckystr_AHUU01000095_r,i__1476</Iteration_query-def>
|
jpayne@1
|
21389 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
21390 <Iteration_hits>
|
jpayne@1
|
21391 <Hit>
|
jpayne@1
|
21392 <Hit_num>1</Hit_num>
|
jpayne@1
|
21393 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21394 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21395 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21396 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21397 <Hit_hsps>
|
jpayne@1
|
21398 <Hsp>
|
jpayne@1
|
21399 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21400 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
21401 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
21402 <Hsp_evalue>3.00914e-133</Hsp_evalue>
|
jpayne@1
|
21403 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21404 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21405 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21406 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21407 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21408 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21409 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
21410 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
21411 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21412 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21413 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21414 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21415 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21416 </Hsp>
|
jpayne@1
|
21417 <Hsp>
|
jpayne@1
|
21418 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21419 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21420 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21421 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
21422 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21423 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21424 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21425 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21426 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21427 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21428 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
21429 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
21430 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21431 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
21432 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21433 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21434 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21435 </Hsp>
|
jpayne@1
|
21436 </Hit_hsps>
|
jpayne@1
|
21437 </Hit>
|
jpayne@1
|
21438 </Iteration_hits>
|
jpayne@1
|
21439 <Iteration_stat>
|
jpayne@1
|
21440 <Statistics>
|
jpayne@1
|
21441 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21442 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21443 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21444 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21445 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21446 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21447 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21448 </Statistics>
|
jpayne@1
|
21449 </Iteration_stat>
|
jpayne@1
|
21450 </Iteration>
|
jpayne@1
|
21451 <Iteration>
|
jpayne@1
|
21452 <Iteration_iter-num>416</Iteration_iter-num>
|
jpayne@1
|
21453 <Iteration_query-ID>Query_416</Iteration_query-ID>
|
jpayne@1
|
21454 <Iteration_query-def>fliC_i_Kentuckystr_AOYZ01000062_r,i__1476</Iteration_query-def>
|
jpayne@1
|
21455 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
21456 <Iteration_hits>
|
jpayne@1
|
21457 <Hit>
|
jpayne@1
|
21458 <Hit_num>1</Hit_num>
|
jpayne@1
|
21459 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21460 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21461 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21462 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21463 <Hit_hsps>
|
jpayne@1
|
21464 <Hsp>
|
jpayne@1
|
21465 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21466 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
21467 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
21468 <Hsp_evalue>1.08228e-132</Hsp_evalue>
|
jpayne@1
|
21469 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21470 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
21471 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21472 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
21473 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21474 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21475 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
21476 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
21477 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21478 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
21479 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
21480 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
21481 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
21482 </Hsp>
|
jpayne@1
|
21483 <Hsp>
|
jpayne@1
|
21484 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21485 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21486 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21487 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
21488 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21489 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21490 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21491 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21492 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21493 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21494 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
21495 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
21496 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21497 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
21498 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21499 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21500 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21501 </Hsp>
|
jpayne@1
|
21502 </Hit_hsps>
|
jpayne@1
|
21503 </Hit>
|
jpayne@1
|
21504 </Iteration_hits>
|
jpayne@1
|
21505 <Iteration_stat>
|
jpayne@1
|
21506 <Statistics>
|
jpayne@1
|
21507 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21508 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21509 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21510 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21511 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21512 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21513 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21514 </Statistics>
|
jpayne@1
|
21515 </Iteration_stat>
|
jpayne@1
|
21516 </Iteration>
|
jpayne@1
|
21517 <Iteration>
|
jpayne@1
|
21518 <Iteration_iter-num>417</Iteration_iter-num>
|
jpayne@1
|
21519 <Iteration_query-ID>Query_417</Iteration_query-ID>
|
jpayne@1
|
21520 <Iteration_query-def>fliC_i_Kentuckystr_ABEI01000026_r,i__1476</Iteration_query-def>
|
jpayne@1
|
21521 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
21522 <Iteration_hits>
|
jpayne@1
|
21523 <Hit>
|
jpayne@1
|
21524 <Hit_num>1</Hit_num>
|
jpayne@1
|
21525 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21526 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21527 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21528 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21529 <Hit_hsps>
|
jpayne@1
|
21530 <Hsp>
|
jpayne@1
|
21531 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21532 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
21533 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
21534 <Hsp_evalue>3.00914e-133</Hsp_evalue>
|
jpayne@1
|
21535 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21536 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21537 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21538 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21539 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21540 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21541 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
21542 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
21543 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21544 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21545 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21546 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21547 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21548 </Hsp>
|
jpayne@1
|
21549 <Hsp>
|
jpayne@1
|
21550 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21551 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21552 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21553 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
21554 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21555 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21556 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21557 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21558 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21559 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21560 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
21561 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
21562 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21563 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
21564 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21565 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21566 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21567 </Hsp>
|
jpayne@1
|
21568 </Hit_hsps>
|
jpayne@1
|
21569 </Hit>
|
jpayne@1
|
21570 </Iteration_hits>
|
jpayne@1
|
21571 <Iteration_stat>
|
jpayne@1
|
21572 <Statistics>
|
jpayne@1
|
21573 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21574 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21575 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21576 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21577 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21578 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21579 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21580 </Statistics>
|
jpayne@1
|
21581 </Iteration_stat>
|
jpayne@1
|
21582 </Iteration>
|
jpayne@1
|
21583 <Iteration>
|
jpayne@1
|
21584 <Iteration_iter-num>418</Iteration_iter-num>
|
jpayne@1
|
21585 <Iteration_query-ID>Query_418</Iteration_query-ID>
|
jpayne@1
|
21586 <Iteration_query-def>fliC_i_Kentuckystr_ABAK02000001_r,i__1476</Iteration_query-def>
|
jpayne@1
|
21587 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
21588 <Iteration_hits>
|
jpayne@1
|
21589 <Hit>
|
jpayne@1
|
21590 <Hit_num>1</Hit_num>
|
jpayne@1
|
21591 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21592 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21593 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21594 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21595 <Hit_hsps>
|
jpayne@1
|
21596 <Hsp>
|
jpayne@1
|
21597 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21598 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
21599 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
21600 <Hsp_evalue>3.00914e-133</Hsp_evalue>
|
jpayne@1
|
21601 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21602 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21603 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21604 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21605 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21606 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21607 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
21608 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
21609 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21610 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21611 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21612 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21613 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21614 </Hsp>
|
jpayne@1
|
21615 <Hsp>
|
jpayne@1
|
21616 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21617 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21618 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21619 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
21620 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21621 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21622 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21623 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21624 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21625 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21626 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
21627 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
21628 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21629 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
21630 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21631 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21632 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21633 </Hsp>
|
jpayne@1
|
21634 </Hit_hsps>
|
jpayne@1
|
21635 </Hit>
|
jpayne@1
|
21636 </Iteration_hits>
|
jpayne@1
|
21637 <Iteration_stat>
|
jpayne@1
|
21638 <Statistics>
|
jpayne@1
|
21639 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21640 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21641 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21642 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21643 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21644 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21645 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21646 </Statistics>
|
jpayne@1
|
21647 </Iteration_stat>
|
jpayne@1
|
21648 </Iteration>
|
jpayne@1
|
21649 <Iteration>
|
jpayne@1
|
21650 <Iteration_iter-num>419</Iteration_iter-num>
|
jpayne@1
|
21651 <Iteration_query-ID>Query_419</Iteration_query-ID>
|
jpayne@1
|
21652 <Iteration_query-def>fliC_i_Kentuckystr_AUQI01000013_r,i__1476</Iteration_query-def>
|
jpayne@1
|
21653 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
21654 <Iteration_hits>
|
jpayne@1
|
21655 <Hit>
|
jpayne@1
|
21656 <Hit_num>1</Hit_num>
|
jpayne@1
|
21657 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21658 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21659 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21660 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21661 <Hit_hsps>
|
jpayne@1
|
21662 <Hsp>
|
jpayne@1
|
21663 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21664 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
21665 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
21666 <Hsp_evalue>3.00914e-133</Hsp_evalue>
|
jpayne@1
|
21667 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21668 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21669 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21670 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21671 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21672 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21673 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
21674 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
21675 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21676 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21677 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21678 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21679 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21680 </Hsp>
|
jpayne@1
|
21681 <Hsp>
|
jpayne@1
|
21682 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21683 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21684 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21685 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
21686 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
21687 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
21688 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21689 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21690 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21691 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21692 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
21693 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
21694 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21695 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
21696 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21697 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21698 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21699 </Hsp>
|
jpayne@1
|
21700 </Hit_hsps>
|
jpayne@1
|
21701 </Hit>
|
jpayne@1
|
21702 </Iteration_hits>
|
jpayne@1
|
21703 <Iteration_stat>
|
jpayne@1
|
21704 <Statistics>
|
jpayne@1
|
21705 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21706 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21707 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21708 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
21709 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21710 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21711 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21712 </Statistics>
|
jpayne@1
|
21713 </Iteration_stat>
|
jpayne@1
|
21714 </Iteration>
|
jpayne@1
|
21715 <Iteration>
|
jpayne@1
|
21716 <Iteration_iter-num>420</Iteration_iter-num>
|
jpayne@1
|
21717 <Iteration_query-ID>Query_420</Iteration_query-ID>
|
jpayne@1
|
21718 <Iteration_query-def>fliC_l,v_Litchfieldstr_APAN01000015_l,v__1503</Iteration_query-def>
|
jpayne@1
|
21719 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
21720 <Iteration_hits>
|
jpayne@1
|
21721 <Hit>
|
jpayne@1
|
21722 <Hit_num>1</Hit_num>
|
jpayne@1
|
21723 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21724 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21725 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21726 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21727 <Hit_hsps>
|
jpayne@1
|
21728 <Hsp>
|
jpayne@1
|
21729 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21730 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
21731 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
21732 <Hsp_evalue>6.54107e-140</Hsp_evalue>
|
jpayne@1
|
21733 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21734 <Hsp_query-to>483</Hsp_query-to>
|
jpayne@1
|
21735 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21736 <Hsp_hit-to>1260</Hsp_hit-to>
|
jpayne@1
|
21737 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21738 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21739 <Hsp_identity>412</Hsp_identity>
|
jpayne@1
|
21740 <Hsp_positive>412</Hsp_positive>
|
jpayne@1
|
21741 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
21742 <Hsp_align-len>485</Hsp_align-len>
|
jpayne@1
|
21743 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTTTCTGGCCAGACCCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTCGGCGCTAACGACGGTGAAACCATCGATATCGATCTG-AAA</Hsp_qseq>
|
jpayne@1
|
21744 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAA</Hsp_hseq>
|
jpayne@1
|
21745 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || |||||| ||||| || || ||||| || ||||||||| | ||||||||| ||| |||||||| || |||||||| ||||||||||| ||||||||| |||</Hsp_midline>
|
jpayne@1
|
21746 </Hsp>
|
jpayne@1
|
21747 <Hsp>
|
jpayne@1
|
21748 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21749 <Hsp_bit-score>222.718</Hsp_bit-score>
|
jpayne@1
|
21750 <Hsp_score>120</Hsp_score>
|
jpayne@1
|
21751 <Hsp_evalue>7.325e-60</Hsp_evalue>
|
jpayne@1
|
21752 <Hsp_query-from>1234</Hsp_query-from>
|
jpayne@1
|
21753 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
21754 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
21755 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
21756 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21757 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21758 <Hsp_identity>220</Hsp_identity>
|
jpayne@1
|
21759 <Hsp_positive>220</Hsp_positive>
|
jpayne@1
|
21760 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
21761 <Hsp_align-len>270</Hsp_align-len>
|
jpayne@1
|
21762 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTATTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
21763 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
21764 <Hsp_midline>||||| |||||| ||||||| | || || | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||</Hsp_midline>
|
jpayne@1
|
21765 </Hsp>
|
jpayne@1
|
21766 </Hit_hsps>
|
jpayne@1
|
21767 </Hit>
|
jpayne@1
|
21768 </Iteration_hits>
|
jpayne@1
|
21769 <Iteration_stat>
|
jpayne@1
|
21770 <Statistics>
|
jpayne@1
|
21771 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21772 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21773 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21774 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
21775 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21776 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21777 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21778 </Statistics>
|
jpayne@1
|
21779 </Iteration_stat>
|
jpayne@1
|
21780 </Iteration>
|
jpayne@1
|
21781 <Iteration>
|
jpayne@1
|
21782 <Iteration_iter-num>421</Iteration_iter-num>
|
jpayne@1
|
21783 <Iteration_query-ID>Query_421</Iteration_query-ID>
|
jpayne@1
|
21784 <Iteration_query-def>fliC_d_Manhattanstr_CBKW010000019_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
21785 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
21786 <Iteration_hits>
|
jpayne@1
|
21787 <Hit>
|
jpayne@1
|
21788 <Hit_num>1</Hit_num>
|
jpayne@1
|
21789 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21790 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21791 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21792 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21793 <Hit_hsps>
|
jpayne@1
|
21794 <Hsp>
|
jpayne@1
|
21795 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21796 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
21797 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
21798 <Hsp_evalue>6.5212e-145</Hsp_evalue>
|
jpayne@1
|
21799 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21800 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
21801 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21802 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
21803 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21804 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21805 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
21806 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
21807 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21808 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
21809 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
21810 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
21811 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
21812 </Hsp>
|
jpayne@1
|
21813 </Hit_hsps>
|
jpayne@1
|
21814 </Hit>
|
jpayne@1
|
21815 </Iteration_hits>
|
jpayne@1
|
21816 <Iteration_stat>
|
jpayne@1
|
21817 <Statistics>
|
jpayne@1
|
21818 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21819 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21820 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21821 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
21822 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21823 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21824 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21825 </Statistics>
|
jpayne@1
|
21826 </Iteration_stat>
|
jpayne@1
|
21827 </Iteration>
|
jpayne@1
|
21828 <Iteration>
|
jpayne@1
|
21829 <Iteration_iter-num>422</Iteration_iter-num>
|
jpayne@1
|
21830 <Iteration_query-ID>Query_422</Iteration_query-ID>
|
jpayne@1
|
21831 <Iteration_query-def>fliC_z10_Mbandakastr_AMRS01000012_other.z10__1488</Iteration_query-def>
|
jpayne@1
|
21832 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
21833 <Iteration_hits>
|
jpayne@1
|
21834 <Hit>
|
jpayne@1
|
21835 <Hit_num>1</Hit_num>
|
jpayne@1
|
21836 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21837 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21838 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21839 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21840 <Hit_hsps>
|
jpayne@1
|
21841 <Hsp>
|
jpayne@1
|
21842 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21843 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
21844 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
21845 <Hsp_evalue>1.40159e-136</Hsp_evalue>
|
jpayne@1
|
21846 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21847 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21848 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21849 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21850 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21851 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21852 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
21853 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
21854 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21855 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21856 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21857 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21858 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21859 </Hsp>
|
jpayne@1
|
21860 <Hsp>
|
jpayne@1
|
21861 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21862 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
21863 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
21864 <Hsp_evalue>9.37977e-59</Hsp_evalue>
|
jpayne@1
|
21865 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
21866 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
21867 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21868 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21869 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21870 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21871 <Hsp_identity>202</Hsp_identity>
|
jpayne@1
|
21872 <Hsp_positive>202</Hsp_positive>
|
jpayne@1
|
21873 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
21874 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
21875 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21876 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21877 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| ||| ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21878 </Hsp>
|
jpayne@1
|
21879 </Hit_hsps>
|
jpayne@1
|
21880 </Hit>
|
jpayne@1
|
21881 </Iteration_hits>
|
jpayne@1
|
21882 <Iteration_stat>
|
jpayne@1
|
21883 <Statistics>
|
jpayne@1
|
21884 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21885 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21886 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21887 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
21888 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21889 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21890 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21891 </Statistics>
|
jpayne@1
|
21892 </Iteration_stat>
|
jpayne@1
|
21893 </Iteration>
|
jpayne@1
|
21894 <Iteration>
|
jpayne@1
|
21895 <Iteration_iter-num>423</Iteration_iter-num>
|
jpayne@1
|
21896 <Iteration_query-ID>Query_423</Iteration_query-ID>
|
jpayne@1
|
21897 <Iteration_query-def>fliC_z10_Mbandakastr_AOYR01000081_other.z10__1488</Iteration_query-def>
|
jpayne@1
|
21898 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
21899 <Iteration_hits>
|
jpayne@1
|
21900 <Hit>
|
jpayne@1
|
21901 <Hit_num>1</Hit_num>
|
jpayne@1
|
21902 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21903 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21904 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21905 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21906 <Hit_hsps>
|
jpayne@1
|
21907 <Hsp>
|
jpayne@1
|
21908 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21909 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
21910 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
21911 <Hsp_evalue>1.40159e-136</Hsp_evalue>
|
jpayne@1
|
21912 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21913 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21914 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21915 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21916 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21917 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21918 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
21919 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
21920 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21921 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21922 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21923 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21924 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21925 </Hsp>
|
jpayne@1
|
21926 <Hsp>
|
jpayne@1
|
21927 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
21928 <Hsp_bit-score>207.945</Hsp_bit-score>
|
jpayne@1
|
21929 <Hsp_score>112</Hsp_score>
|
jpayne@1
|
21930 <Hsp_evalue>2.03036e-55</Hsp_evalue>
|
jpayne@1
|
21931 <Hsp_query-from>1245</Hsp_query-from>
|
jpayne@1
|
21932 <Hsp_query-to>1488</Hsp_query-to>
|
jpayne@1
|
21933 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
21934 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
21935 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21936 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21937 <Hsp_identity>200</Hsp_identity>
|
jpayne@1
|
21938 <Hsp_positive>200</Hsp_positive>
|
jpayne@1
|
21939 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
21940 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
21941 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGGGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
21942 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
21943 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| |||||||| | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
21944 </Hsp>
|
jpayne@1
|
21945 </Hit_hsps>
|
jpayne@1
|
21946 </Hit>
|
jpayne@1
|
21947 </Iteration_hits>
|
jpayne@1
|
21948 <Iteration_stat>
|
jpayne@1
|
21949 <Statistics>
|
jpayne@1
|
21950 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21951 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21952 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
21953 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
21954 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
21955 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
21956 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
21957 </Statistics>
|
jpayne@1
|
21958 </Iteration_stat>
|
jpayne@1
|
21959 </Iteration>
|
jpayne@1
|
21960 <Iteration>
|
jpayne@1
|
21961 <Iteration_iter-num>424</Iteration_iter-num>
|
jpayne@1
|
21962 <Iteration_query-ID>Query_424</Iteration_query-ID>
|
jpayne@1
|
21963 <Iteration_query-def>fliC_e,h_Meleagridisstr_AOYN01000134_e__1497</Iteration_query-def>
|
jpayne@1
|
21964 <Iteration_query-len>1497</Iteration_query-len>
|
jpayne@1
|
21965 <Iteration_hits>
|
jpayne@1
|
21966 <Hit>
|
jpayne@1
|
21967 <Hit_num>1</Hit_num>
|
jpayne@1
|
21968 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
21969 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
21970 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
21971 <Hit_len>1962</Hit_len>
|
jpayne@1
|
21972 <Hit_hsps>
|
jpayne@1
|
21973 <Hsp>
|
jpayne@1
|
21974 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
21975 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
21976 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
21977 <Hsp_evalue>1.41017e-136</Hsp_evalue>
|
jpayne@1
|
21978 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
21979 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
21980 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
21981 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
21982 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
21983 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
21984 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
21985 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
21986 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
21987 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
21988 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGTGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
21989 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
21990 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
21991 </Hsp>
|
jpayne@1
|
21992 </Hit_hsps>
|
jpayne@1
|
21993 </Hit>
|
jpayne@1
|
21994 </Iteration_hits>
|
jpayne@1
|
21995 <Iteration_stat>
|
jpayne@1
|
21996 <Statistics>
|
jpayne@1
|
21997 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
21998 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
21999 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22000 <Statistics_eff-space>80895384</Statistics_eff-space>
|
jpayne@1
|
22001 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22002 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22003 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22004 </Statistics>
|
jpayne@1
|
22005 </Iteration_stat>
|
jpayne@1
|
22006 </Iteration>
|
jpayne@1
|
22007 <Iteration>
|
jpayne@1
|
22008 <Iteration_iter-num>425</Iteration_iter-num>
|
jpayne@1
|
22009 <Iteration_query-ID>Query_425</Iteration_query-ID>
|
jpayne@1
|
22010 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESV01000018_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22011 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22012 <Iteration_hits>
|
jpayne@1
|
22013 <Hit>
|
jpayne@1
|
22014 <Hit_num>1</Hit_num>
|
jpayne@1
|
22015 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22016 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22017 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22018 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22019 <Hit_hsps>
|
jpayne@1
|
22020 <Hsp>
|
jpayne@1
|
22021 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22022 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22023 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22024 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22025 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22026 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22027 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22028 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22029 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22030 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22031 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22032 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22033 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22034 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22035 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22036 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22037 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22038 </Hsp>
|
jpayne@1
|
22039 </Hit_hsps>
|
jpayne@1
|
22040 </Hit>
|
jpayne@1
|
22041 </Iteration_hits>
|
jpayne@1
|
22042 <Iteration_stat>
|
jpayne@1
|
22043 <Statistics>
|
jpayne@1
|
22044 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22045 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22046 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22047 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22048 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22049 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22050 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22051 </Statistics>
|
jpayne@1
|
22052 </Iteration_stat>
|
jpayne@1
|
22053 </Iteration>
|
jpayne@1
|
22054 <Iteration>
|
jpayne@1
|
22055 <Iteration_iter-num>426</Iteration_iter-num>
|
jpayne@1
|
22056 <Iteration_query-ID>Query_426</Iteration_query-ID>
|
jpayne@1
|
22057 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETO01000011_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22058 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22059 <Iteration_hits>
|
jpayne@1
|
22060 <Hit>
|
jpayne@1
|
22061 <Hit_num>1</Hit_num>
|
jpayne@1
|
22062 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22063 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22064 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22065 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22066 <Hit_hsps>
|
jpayne@1
|
22067 <Hsp>
|
jpayne@1
|
22068 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22069 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22070 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22071 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22072 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22073 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22074 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22075 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22076 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22077 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22078 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22079 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22080 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22081 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22082 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22083 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22084 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22085 </Hsp>
|
jpayne@1
|
22086 </Hit_hsps>
|
jpayne@1
|
22087 </Hit>
|
jpayne@1
|
22088 </Iteration_hits>
|
jpayne@1
|
22089 <Iteration_stat>
|
jpayne@1
|
22090 <Statistics>
|
jpayne@1
|
22091 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22092 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22093 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22094 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22095 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22096 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22097 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22098 </Statistics>
|
jpayne@1
|
22099 </Iteration_stat>
|
jpayne@1
|
22100 </Iteration>
|
jpayne@1
|
22101 <Iteration>
|
jpayne@1
|
22102 <Iteration_iter-num>427</Iteration_iter-num>
|
jpayne@1
|
22103 <Iteration_query-ID>Query_427</Iteration_query-ID>
|
jpayne@1
|
22104 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETP01000010_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22105 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22106 <Iteration_hits>
|
jpayne@1
|
22107 <Hit>
|
jpayne@1
|
22108 <Hit_num>1</Hit_num>
|
jpayne@1
|
22109 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22110 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22111 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22112 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22113 <Hit_hsps>
|
jpayne@1
|
22114 <Hsp>
|
jpayne@1
|
22115 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22116 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22117 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22118 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22119 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22120 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22121 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22122 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22123 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22124 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22125 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22126 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22127 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22128 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22129 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22130 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22131 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22132 </Hsp>
|
jpayne@1
|
22133 </Hit_hsps>
|
jpayne@1
|
22134 </Hit>
|
jpayne@1
|
22135 </Iteration_hits>
|
jpayne@1
|
22136 <Iteration_stat>
|
jpayne@1
|
22137 <Statistics>
|
jpayne@1
|
22138 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22139 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22140 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22141 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22142 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22143 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22144 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22145 </Statistics>
|
jpayne@1
|
22146 </Iteration_stat>
|
jpayne@1
|
22147 </Iteration>
|
jpayne@1
|
22148 <Iteration>
|
jpayne@1
|
22149 <Iteration_iter-num>428</Iteration_iter-num>
|
jpayne@1
|
22150 <Iteration_query-ID>Query_428</Iteration_query-ID>
|
jpayne@1
|
22151 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESW01000008_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22152 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22153 <Iteration_hits>
|
jpayne@1
|
22154 <Hit>
|
jpayne@1
|
22155 <Hit_num>1</Hit_num>
|
jpayne@1
|
22156 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22157 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22158 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22159 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22160 <Hit_hsps>
|
jpayne@1
|
22161 <Hsp>
|
jpayne@1
|
22162 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22163 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22164 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22165 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22166 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22167 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22168 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22169 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22170 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22171 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22172 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22173 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22174 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22175 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22176 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22177 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22178 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22179 </Hsp>
|
jpayne@1
|
22180 </Hit_hsps>
|
jpayne@1
|
22181 </Hit>
|
jpayne@1
|
22182 </Iteration_hits>
|
jpayne@1
|
22183 <Iteration_stat>
|
jpayne@1
|
22184 <Statistics>
|
jpayne@1
|
22185 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22186 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22187 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22188 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22189 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22190 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22191 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22192 </Statistics>
|
jpayne@1
|
22193 </Iteration_stat>
|
jpayne@1
|
22194 </Iteration>
|
jpayne@1
|
22195 <Iteration>
|
jpayne@1
|
22196 <Iteration_iter-num>429</Iteration_iter-num>
|
jpayne@1
|
22197 <Iteration_query-ID>Query_429</Iteration_query-ID>
|
jpayne@1
|
22198 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETQ01000008_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22199 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22200 <Iteration_hits>
|
jpayne@1
|
22201 <Hit>
|
jpayne@1
|
22202 <Hit_num>1</Hit_num>
|
jpayne@1
|
22203 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22204 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22205 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22206 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22207 <Hit_hsps>
|
jpayne@1
|
22208 <Hsp>
|
jpayne@1
|
22209 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22210 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22211 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22212 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22213 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22214 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22215 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22216 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22217 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22218 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22219 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22220 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22221 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22222 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22223 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22224 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22225 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22226 </Hsp>
|
jpayne@1
|
22227 </Hit_hsps>
|
jpayne@1
|
22228 </Hit>
|
jpayne@1
|
22229 </Iteration_hits>
|
jpayne@1
|
22230 <Iteration_stat>
|
jpayne@1
|
22231 <Statistics>
|
jpayne@1
|
22232 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22233 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22234 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22235 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22236 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22237 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22238 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22239 </Statistics>
|
jpayne@1
|
22240 </Iteration_stat>
|
jpayne@1
|
22241 </Iteration>
|
jpayne@1
|
22242 <Iteration>
|
jpayne@1
|
22243 <Iteration_iter-num>430</Iteration_iter-num>
|
jpayne@1
|
22244 <Iteration_query-ID>Query_430</Iteration_query-ID>
|
jpayne@1
|
22245 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESH01000005_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22246 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22247 <Iteration_hits>
|
jpayne@1
|
22248 <Hit>
|
jpayne@1
|
22249 <Hit_num>1</Hit_num>
|
jpayne@1
|
22250 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22251 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22252 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22253 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22254 <Hit_hsps>
|
jpayne@1
|
22255 <Hsp>
|
jpayne@1
|
22256 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22257 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22258 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22259 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22260 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22261 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22262 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22263 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22264 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22265 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22266 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22267 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22268 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22269 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22270 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22271 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22272 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22273 </Hsp>
|
jpayne@1
|
22274 </Hit_hsps>
|
jpayne@1
|
22275 </Hit>
|
jpayne@1
|
22276 </Iteration_hits>
|
jpayne@1
|
22277 <Iteration_stat>
|
jpayne@1
|
22278 <Statistics>
|
jpayne@1
|
22279 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22280 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22281 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22282 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22283 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22284 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22285 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22286 </Statistics>
|
jpayne@1
|
22287 </Iteration_stat>
|
jpayne@1
|
22288 </Iteration>
|
jpayne@1
|
22289 <Iteration>
|
jpayne@1
|
22290 <Iteration_iter-num>431</Iteration_iter-num>
|
jpayne@1
|
22291 <Iteration_query-ID>Query_431</Iteration_query-ID>
|
jpayne@1
|
22292 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETC01000024_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22293 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22294 <Iteration_hits>
|
jpayne@1
|
22295 <Hit>
|
jpayne@1
|
22296 <Hit_num>1</Hit_num>
|
jpayne@1
|
22297 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22298 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22299 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22300 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22301 <Hit_hsps>
|
jpayne@1
|
22302 <Hsp>
|
jpayne@1
|
22303 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22304 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22305 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22306 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22307 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22308 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22309 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22310 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22311 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22312 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22313 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22314 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22315 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22316 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22317 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22318 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22319 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22320 </Hsp>
|
jpayne@1
|
22321 </Hit_hsps>
|
jpayne@1
|
22322 </Hit>
|
jpayne@1
|
22323 </Iteration_hits>
|
jpayne@1
|
22324 <Iteration_stat>
|
jpayne@1
|
22325 <Statistics>
|
jpayne@1
|
22326 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22327 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22328 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22329 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22330 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22331 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22332 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22333 </Statistics>
|
jpayne@1
|
22334 </Iteration_stat>
|
jpayne@1
|
22335 </Iteration>
|
jpayne@1
|
22336 <Iteration>
|
jpayne@1
|
22337 <Iteration_iter-num>432</Iteration_iter-num>
|
jpayne@1
|
22338 <Iteration_query-ID>Query_432</Iteration_query-ID>
|
jpayne@1
|
22339 <Iteration_query-def>fliC_g,m,p,s_Montevideostr_AETD01000005_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22340 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22341 <Iteration_hits>
|
jpayne@1
|
22342 <Hit>
|
jpayne@1
|
22343 <Hit_num>1</Hit_num>
|
jpayne@1
|
22344 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22345 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22346 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22347 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22348 <Hit_hsps>
|
jpayne@1
|
22349 <Hsp>
|
jpayne@1
|
22350 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22351 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22352 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22353 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22354 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22355 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22356 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22357 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22358 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22359 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22360 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22361 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22362 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22363 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22364 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAAAAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22365 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22366 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22367 </Hsp>
|
jpayne@1
|
22368 </Hit_hsps>
|
jpayne@1
|
22369 </Hit>
|
jpayne@1
|
22370 </Iteration_hits>
|
jpayne@1
|
22371 <Iteration_stat>
|
jpayne@1
|
22372 <Statistics>
|
jpayne@1
|
22373 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22374 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22375 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22376 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22377 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22378 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22379 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22380 </Statistics>
|
jpayne@1
|
22381 </Iteration_stat>
|
jpayne@1
|
22382 </Iteration>
|
jpayne@1
|
22383 <Iteration>
|
jpayne@1
|
22384 <Iteration_iter-num>433</Iteration_iter-num>
|
jpayne@1
|
22385 <Iteration_query-ID>Query_433</Iteration_query-ID>
|
jpayne@1
|
22386 <Iteration_query-def>fliC_g,m,p,s_Montevideostr_AETB01000006_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22387 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22388 <Iteration_hits>
|
jpayne@1
|
22389 <Hit>
|
jpayne@1
|
22390 <Hit_num>1</Hit_num>
|
jpayne@1
|
22391 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22392 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22393 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22394 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22395 <Hit_hsps>
|
jpayne@1
|
22396 <Hsp>
|
jpayne@1
|
22397 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22398 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22399 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22400 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22401 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22402 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22403 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22404 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22405 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22406 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22407 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22408 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22409 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22410 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22411 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAAAAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22412 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22413 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22414 </Hsp>
|
jpayne@1
|
22415 </Hit_hsps>
|
jpayne@1
|
22416 </Hit>
|
jpayne@1
|
22417 </Iteration_hits>
|
jpayne@1
|
22418 <Iteration_stat>
|
jpayne@1
|
22419 <Statistics>
|
jpayne@1
|
22420 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22421 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22422 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22423 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22424 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22425 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22426 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22427 </Statistics>
|
jpayne@1
|
22428 </Iteration_stat>
|
jpayne@1
|
22429 </Iteration>
|
jpayne@1
|
22430 <Iteration>
|
jpayne@1
|
22431 <Iteration_iter-num>434</Iteration_iter-num>
|
jpayne@1
|
22432 <Iteration_query-ID>Query_434</Iteration_query-ID>
|
jpayne@1
|
22433 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESX01000056_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22434 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22435 <Iteration_hits>
|
jpayne@1
|
22436 <Hit>
|
jpayne@1
|
22437 <Hit_num>1</Hit_num>
|
jpayne@1
|
22438 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22439 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22440 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22441 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22442 <Hit_hsps>
|
jpayne@1
|
22443 <Hsp>
|
jpayne@1
|
22444 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22445 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22446 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22447 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22448 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22449 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22450 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22451 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22452 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22453 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22454 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22455 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22456 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22457 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22458 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22459 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22460 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22461 </Hsp>
|
jpayne@1
|
22462 </Hit_hsps>
|
jpayne@1
|
22463 </Hit>
|
jpayne@1
|
22464 </Iteration_hits>
|
jpayne@1
|
22465 <Iteration_stat>
|
jpayne@1
|
22466 <Statistics>
|
jpayne@1
|
22467 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22468 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22469 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22470 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22471 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22472 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22473 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22474 </Statistics>
|
jpayne@1
|
22475 </Iteration_stat>
|
jpayne@1
|
22476 </Iteration>
|
jpayne@1
|
22477 <Iteration>
|
jpayne@1
|
22478 <Iteration_iter-num>435</Iteration_iter-num>
|
jpayne@1
|
22479 <Iteration_query-ID>Query_435</Iteration_query-ID>
|
jpayne@1
|
22480 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESY01000046_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22481 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22482 <Iteration_hits>
|
jpayne@1
|
22483 <Hit>
|
jpayne@1
|
22484 <Hit_num>1</Hit_num>
|
jpayne@1
|
22485 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22486 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22487 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22488 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22489 <Hit_hsps>
|
jpayne@1
|
22490 <Hsp>
|
jpayne@1
|
22491 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22492 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22493 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22494 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22495 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22496 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22497 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22498 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22499 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22500 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22501 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22502 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22503 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22504 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22505 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22506 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22507 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22508 </Hsp>
|
jpayne@1
|
22509 </Hit_hsps>
|
jpayne@1
|
22510 </Hit>
|
jpayne@1
|
22511 </Iteration_hits>
|
jpayne@1
|
22512 <Iteration_stat>
|
jpayne@1
|
22513 <Statistics>
|
jpayne@1
|
22514 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22515 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22516 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22517 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22518 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22519 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22520 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22521 </Statistics>
|
jpayne@1
|
22522 </Iteration_stat>
|
jpayne@1
|
22523 </Iteration>
|
jpayne@1
|
22524 <Iteration>
|
jpayne@1
|
22525 <Iteration_iter-num>436</Iteration_iter-num>
|
jpayne@1
|
22526 <Iteration_query-ID>Query_436</Iteration_query-ID>
|
jpayne@1
|
22527 <Iteration_query-def>fliC_g,m,p,s_Montevideostr_AETE01000015_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22528 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22529 <Iteration_hits>
|
jpayne@1
|
22530 <Hit>
|
jpayne@1
|
22531 <Hit_num>1</Hit_num>
|
jpayne@1
|
22532 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22533 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22534 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22535 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22536 <Hit_hsps>
|
jpayne@1
|
22537 <Hsp>
|
jpayne@1
|
22538 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22539 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22540 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22541 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22542 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22543 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22544 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22545 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22546 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22547 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22548 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22549 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22550 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22551 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22552 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAAAAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22553 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22554 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22555 </Hsp>
|
jpayne@1
|
22556 </Hit_hsps>
|
jpayne@1
|
22557 </Hit>
|
jpayne@1
|
22558 </Iteration_hits>
|
jpayne@1
|
22559 <Iteration_stat>
|
jpayne@1
|
22560 <Statistics>
|
jpayne@1
|
22561 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22562 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22563 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22564 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22565 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22566 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22567 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22568 </Statistics>
|
jpayne@1
|
22569 </Iteration_stat>
|
jpayne@1
|
22570 </Iteration>
|
jpayne@1
|
22571 <Iteration>
|
jpayne@1
|
22572 <Iteration_iter-num>437</Iteration_iter-num>
|
jpayne@1
|
22573 <Iteration_query-ID>Query_437</Iteration_query-ID>
|
jpayne@1
|
22574 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESI01000041_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22575 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22576 <Iteration_hits>
|
jpayne@1
|
22577 <Hit>
|
jpayne@1
|
22578 <Hit_num>1</Hit_num>
|
jpayne@1
|
22579 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22580 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22581 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22582 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22583 <Hit_hsps>
|
jpayne@1
|
22584 <Hsp>
|
jpayne@1
|
22585 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22586 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22587 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22588 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22589 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22590 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22591 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22592 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22593 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22594 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22595 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22596 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22597 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22598 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22599 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22600 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22601 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22602 </Hsp>
|
jpayne@1
|
22603 </Hit_hsps>
|
jpayne@1
|
22604 </Hit>
|
jpayne@1
|
22605 </Iteration_hits>
|
jpayne@1
|
22606 <Iteration_stat>
|
jpayne@1
|
22607 <Statistics>
|
jpayne@1
|
22608 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22609 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22610 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22611 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22612 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22613 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22614 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22615 </Statistics>
|
jpayne@1
|
22616 </Iteration_stat>
|
jpayne@1
|
22617 </Iteration>
|
jpayne@1
|
22618 <Iteration>
|
jpayne@1
|
22619 <Iteration_iter-num>438</Iteration_iter-num>
|
jpayne@1
|
22620 <Iteration_query-ID>Query_438</Iteration_query-ID>
|
jpayne@1
|
22621 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESJ01000008_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22622 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22623 <Iteration_hits>
|
jpayne@1
|
22624 <Hit>
|
jpayne@1
|
22625 <Hit_num>1</Hit_num>
|
jpayne@1
|
22626 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22627 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22628 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22629 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22630 <Hit_hsps>
|
jpayne@1
|
22631 <Hsp>
|
jpayne@1
|
22632 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22633 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22634 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22635 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22636 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22637 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22638 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22639 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22640 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22641 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22642 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22643 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22644 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22645 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22646 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22647 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22648 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22649 </Hsp>
|
jpayne@1
|
22650 </Hit_hsps>
|
jpayne@1
|
22651 </Hit>
|
jpayne@1
|
22652 </Iteration_hits>
|
jpayne@1
|
22653 <Iteration_stat>
|
jpayne@1
|
22654 <Statistics>
|
jpayne@1
|
22655 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22656 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22657 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22658 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22659 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22660 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22661 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22662 </Statistics>
|
jpayne@1
|
22663 </Iteration_stat>
|
jpayne@1
|
22664 </Iteration>
|
jpayne@1
|
22665 <Iteration>
|
jpayne@1
|
22666 <Iteration_iter-num>439</Iteration_iter-num>
|
jpayne@1
|
22667 <Iteration_query-ID>Query_439</Iteration_query-ID>
|
jpayne@1
|
22668 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESK01000044_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22669 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22670 <Iteration_hits>
|
jpayne@1
|
22671 <Hit>
|
jpayne@1
|
22672 <Hit_num>1</Hit_num>
|
jpayne@1
|
22673 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22674 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22675 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22676 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22677 <Hit_hsps>
|
jpayne@1
|
22678 <Hsp>
|
jpayne@1
|
22679 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22680 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22681 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22682 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22683 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22684 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22685 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22686 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22687 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22688 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22689 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22690 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22691 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22692 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22693 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22694 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22695 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22696 </Hsp>
|
jpayne@1
|
22697 </Hit_hsps>
|
jpayne@1
|
22698 </Hit>
|
jpayne@1
|
22699 </Iteration_hits>
|
jpayne@1
|
22700 <Iteration_stat>
|
jpayne@1
|
22701 <Statistics>
|
jpayne@1
|
22702 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22703 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22704 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22705 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22706 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22707 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22708 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22709 </Statistics>
|
jpayne@1
|
22710 </Iteration_stat>
|
jpayne@1
|
22711 </Iteration>
|
jpayne@1
|
22712 <Iteration>
|
jpayne@1
|
22713 <Iteration_iter-num>440</Iteration_iter-num>
|
jpayne@1
|
22714 <Iteration_query-ID>Query_440</Iteration_query-ID>
|
jpayne@1
|
22715 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETI02000041_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22716 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22717 <Iteration_hits>
|
jpayne@1
|
22718 <Hit>
|
jpayne@1
|
22719 <Hit_num>1</Hit_num>
|
jpayne@1
|
22720 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22721 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22722 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22723 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22724 <Hit_hsps>
|
jpayne@1
|
22725 <Hsp>
|
jpayne@1
|
22726 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22727 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22728 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22729 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22730 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22731 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22732 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22733 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22734 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22735 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22736 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22737 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22738 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22739 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22740 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22741 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22742 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22743 </Hsp>
|
jpayne@1
|
22744 </Hit_hsps>
|
jpayne@1
|
22745 </Hit>
|
jpayne@1
|
22746 </Iteration_hits>
|
jpayne@1
|
22747 <Iteration_stat>
|
jpayne@1
|
22748 <Statistics>
|
jpayne@1
|
22749 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22750 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22751 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22752 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22753 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22754 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22755 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22756 </Statistics>
|
jpayne@1
|
22757 </Iteration_stat>
|
jpayne@1
|
22758 </Iteration>
|
jpayne@1
|
22759 <Iteration>
|
jpayne@1
|
22760 <Iteration_iter-num>441</Iteration_iter-num>
|
jpayne@1
|
22761 <Iteration_query-ID>Query_441</Iteration_query-ID>
|
jpayne@1
|
22762 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESL01000019_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22763 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22764 <Iteration_hits>
|
jpayne@1
|
22765 <Hit>
|
jpayne@1
|
22766 <Hit_num>1</Hit_num>
|
jpayne@1
|
22767 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22768 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22769 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22770 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22771 <Hit_hsps>
|
jpayne@1
|
22772 <Hsp>
|
jpayne@1
|
22773 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22774 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22775 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22776 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22777 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22778 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22779 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22780 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22781 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22782 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22783 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22784 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22785 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22786 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22787 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22788 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22789 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22790 </Hsp>
|
jpayne@1
|
22791 </Hit_hsps>
|
jpayne@1
|
22792 </Hit>
|
jpayne@1
|
22793 </Iteration_hits>
|
jpayne@1
|
22794 <Iteration_stat>
|
jpayne@1
|
22795 <Statistics>
|
jpayne@1
|
22796 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22797 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22798 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22799 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22800 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22801 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22802 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22803 </Statistics>
|
jpayne@1
|
22804 </Iteration_stat>
|
jpayne@1
|
22805 </Iteration>
|
jpayne@1
|
22806 <Iteration>
|
jpayne@1
|
22807 <Iteration_iter-num>442</Iteration_iter-num>
|
jpayne@1
|
22808 <Iteration_query-ID>Query_442</Iteration_query-ID>
|
jpayne@1
|
22809 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESM01000002_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22810 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22811 <Iteration_hits>
|
jpayne@1
|
22812 <Hit>
|
jpayne@1
|
22813 <Hit_num>1</Hit_num>
|
jpayne@1
|
22814 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22815 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22816 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22817 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22818 <Hit_hsps>
|
jpayne@1
|
22819 <Hsp>
|
jpayne@1
|
22820 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22821 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22822 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22823 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22824 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22825 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22826 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22827 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22828 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22829 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22830 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22831 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22832 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22833 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22834 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22835 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22836 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22837 </Hsp>
|
jpayne@1
|
22838 </Hit_hsps>
|
jpayne@1
|
22839 </Hit>
|
jpayne@1
|
22840 </Iteration_hits>
|
jpayne@1
|
22841 <Iteration_stat>
|
jpayne@1
|
22842 <Statistics>
|
jpayne@1
|
22843 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22844 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22845 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22846 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22847 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22848 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22849 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22850 </Statistics>
|
jpayne@1
|
22851 </Iteration_stat>
|
jpayne@1
|
22852 </Iteration>
|
jpayne@1
|
22853 <Iteration>
|
jpayne@1
|
22854 <Iteration_iter-num>443</Iteration_iter-num>
|
jpayne@1
|
22855 <Iteration_query-ID>Query_443</Iteration_query-ID>
|
jpayne@1
|
22856 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETJ01000074_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22857 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22858 <Iteration_hits>
|
jpayne@1
|
22859 <Hit>
|
jpayne@1
|
22860 <Hit_num>1</Hit_num>
|
jpayne@1
|
22861 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22862 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22863 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22864 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22865 <Hit_hsps>
|
jpayne@1
|
22866 <Hsp>
|
jpayne@1
|
22867 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22868 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22869 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22870 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22871 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22872 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22873 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22874 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22875 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22876 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22877 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22878 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22879 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22880 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22881 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22882 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22883 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22884 </Hsp>
|
jpayne@1
|
22885 </Hit_hsps>
|
jpayne@1
|
22886 </Hit>
|
jpayne@1
|
22887 </Iteration_hits>
|
jpayne@1
|
22888 <Iteration_stat>
|
jpayne@1
|
22889 <Statistics>
|
jpayne@1
|
22890 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22891 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22892 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22893 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22894 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22895 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22896 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22897 </Statistics>
|
jpayne@1
|
22898 </Iteration_stat>
|
jpayne@1
|
22899 </Iteration>
|
jpayne@1
|
22900 <Iteration>
|
jpayne@1
|
22901 <Iteration_iter-num>444</Iteration_iter-num>
|
jpayne@1
|
22902 <Iteration_query-ID>Query_444</Iteration_query-ID>
|
jpayne@1
|
22903 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETF01000024_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22904 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22905 <Iteration_hits>
|
jpayne@1
|
22906 <Hit>
|
jpayne@1
|
22907 <Hit_num>1</Hit_num>
|
jpayne@1
|
22908 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22909 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22910 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22911 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22912 <Hit_hsps>
|
jpayne@1
|
22913 <Hsp>
|
jpayne@1
|
22914 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22915 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22916 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22917 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22918 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22919 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22920 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22921 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22922 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22923 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22924 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22925 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22926 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22927 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22928 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22929 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22930 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22931 </Hsp>
|
jpayne@1
|
22932 </Hit_hsps>
|
jpayne@1
|
22933 </Hit>
|
jpayne@1
|
22934 </Iteration_hits>
|
jpayne@1
|
22935 <Iteration_stat>
|
jpayne@1
|
22936 <Statistics>
|
jpayne@1
|
22937 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22938 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22939 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22940 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22941 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22942 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22943 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22944 </Statistics>
|
jpayne@1
|
22945 </Iteration_stat>
|
jpayne@1
|
22946 </Iteration>
|
jpayne@1
|
22947 <Iteration>
|
jpayne@1
|
22948 <Iteration_iter-num>445</Iteration_iter-num>
|
jpayne@1
|
22949 <Iteration_query-ID>Query_445</Iteration_query-ID>
|
jpayne@1
|
22950 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETH01000030_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22951 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22952 <Iteration_hits>
|
jpayne@1
|
22953 <Hit>
|
jpayne@1
|
22954 <Hit_num>1</Hit_num>
|
jpayne@1
|
22955 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
22956 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
22957 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
22958 <Hit_len>1962</Hit_len>
|
jpayne@1
|
22959 <Hit_hsps>
|
jpayne@1
|
22960 <Hsp>
|
jpayne@1
|
22961 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
22962 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
22963 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
22964 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
22965 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
22966 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
22967 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
22968 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
22969 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
22970 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
22971 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
22972 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
22973 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
22974 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
22975 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
22976 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
22977 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
22978 </Hsp>
|
jpayne@1
|
22979 </Hit_hsps>
|
jpayne@1
|
22980 </Hit>
|
jpayne@1
|
22981 </Iteration_hits>
|
jpayne@1
|
22982 <Iteration_stat>
|
jpayne@1
|
22983 <Statistics>
|
jpayne@1
|
22984 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
22985 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
22986 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
22987 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
22988 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
22989 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
22990 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
22991 </Statistics>
|
jpayne@1
|
22992 </Iteration_stat>
|
jpayne@1
|
22993 </Iteration>
|
jpayne@1
|
22994 <Iteration>
|
jpayne@1
|
22995 <Iteration_iter-num>446</Iteration_iter-num>
|
jpayne@1
|
22996 <Iteration_query-ID>Query_446</Iteration_query-ID>
|
jpayne@1
|
22997 <Iteration_query-def>fliC_g,m,s_Montevideostr_AHHR01000020_g,m__1506</Iteration_query-def>
|
jpayne@1
|
22998 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
22999 <Iteration_hits>
|
jpayne@1
|
23000 <Hit>
|
jpayne@1
|
23001 <Hit_num>1</Hit_num>
|
jpayne@1
|
23002 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23003 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23004 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23005 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23006 <Hit_hsps>
|
jpayne@1
|
23007 <Hsp>
|
jpayne@1
|
23008 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23009 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23010 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23011 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23012 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23013 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23014 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23015 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23016 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23017 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23018 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23019 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23020 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23021 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23022 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23023 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23024 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23025 </Hsp>
|
jpayne@1
|
23026 </Hit_hsps>
|
jpayne@1
|
23027 </Hit>
|
jpayne@1
|
23028 </Iteration_hits>
|
jpayne@1
|
23029 <Iteration_stat>
|
jpayne@1
|
23030 <Statistics>
|
jpayne@1
|
23031 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23032 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23033 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23034 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23035 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23036 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23037 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23038 </Statistics>
|
jpayne@1
|
23039 </Iteration_stat>
|
jpayne@1
|
23040 </Iteration>
|
jpayne@1
|
23041 <Iteration>
|
jpayne@1
|
23042 <Iteration_iter-num>447</Iteration_iter-num>
|
jpayne@1
|
23043 <Iteration_query-ID>Query_447</Iteration_query-ID>
|
jpayne@1
|
23044 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESZ01000027_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23045 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23046 <Iteration_hits>
|
jpayne@1
|
23047 <Hit>
|
jpayne@1
|
23048 <Hit_num>1</Hit_num>
|
jpayne@1
|
23049 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23050 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23051 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23052 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23053 <Hit_hsps>
|
jpayne@1
|
23054 <Hsp>
|
jpayne@1
|
23055 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23056 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23057 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23058 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23059 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23060 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23061 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23062 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23063 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23064 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23065 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23066 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23067 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23068 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23069 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23070 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23071 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23072 </Hsp>
|
jpayne@1
|
23073 </Hit_hsps>
|
jpayne@1
|
23074 </Hit>
|
jpayne@1
|
23075 </Iteration_hits>
|
jpayne@1
|
23076 <Iteration_stat>
|
jpayne@1
|
23077 <Statistics>
|
jpayne@1
|
23078 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23079 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23080 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23081 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23082 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23083 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23084 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23085 </Statistics>
|
jpayne@1
|
23086 </Iteration_stat>
|
jpayne@1
|
23087 </Iteration>
|
jpayne@1
|
23088 <Iteration>
|
jpayne@1
|
23089 <Iteration_iter-num>448</Iteration_iter-num>
|
jpayne@1
|
23090 <Iteration_query-ID>Query_448</Iteration_query-ID>
|
jpayne@1
|
23091 <Iteration_query-def>fliC_g,m,s_Montevideostr_AOYQ01000011_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23092 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23093 <Iteration_hits>
|
jpayne@1
|
23094 <Hit>
|
jpayne@1
|
23095 <Hit_num>1</Hit_num>
|
jpayne@1
|
23096 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23097 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23098 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23099 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23100 <Hit_hsps>
|
jpayne@1
|
23101 <Hsp>
|
jpayne@1
|
23102 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23103 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23104 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23105 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23106 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23107 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23108 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23109 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23110 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23111 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23112 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23113 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23114 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23115 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23116 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23117 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23118 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23119 </Hsp>
|
jpayne@1
|
23120 </Hit_hsps>
|
jpayne@1
|
23121 </Hit>
|
jpayne@1
|
23122 </Iteration_hits>
|
jpayne@1
|
23123 <Iteration_stat>
|
jpayne@1
|
23124 <Statistics>
|
jpayne@1
|
23125 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23126 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23127 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23128 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23129 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23130 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23131 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23132 </Statistics>
|
jpayne@1
|
23133 </Iteration_stat>
|
jpayne@1
|
23134 </Iteration>
|
jpayne@1
|
23135 <Iteration>
|
jpayne@1
|
23136 <Iteration_iter-num>449</Iteration_iter-num>
|
jpayne@1
|
23137 <Iteration_query-ID>Query_449</Iteration_query-ID>
|
jpayne@1
|
23138 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESQ01000027_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23139 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23140 <Iteration_hits>
|
jpayne@1
|
23141 <Hit>
|
jpayne@1
|
23142 <Hit_num>1</Hit_num>
|
jpayne@1
|
23143 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23144 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23145 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23146 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23147 <Hit_hsps>
|
jpayne@1
|
23148 <Hsp>
|
jpayne@1
|
23149 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23150 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23151 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23152 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23153 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23154 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23155 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23156 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23157 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23158 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23159 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23160 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23161 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23162 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23163 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23164 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23165 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23166 </Hsp>
|
jpayne@1
|
23167 </Hit_hsps>
|
jpayne@1
|
23168 </Hit>
|
jpayne@1
|
23169 </Iteration_hits>
|
jpayne@1
|
23170 <Iteration_stat>
|
jpayne@1
|
23171 <Statistics>
|
jpayne@1
|
23172 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23173 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23174 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23175 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23176 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23177 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23178 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23179 </Statistics>
|
jpayne@1
|
23180 </Iteration_stat>
|
jpayne@1
|
23181 </Iteration>
|
jpayne@1
|
23182 <Iteration>
|
jpayne@1
|
23183 <Iteration_iter-num>450</Iteration_iter-num>
|
jpayne@1
|
23184 <Iteration_query-ID>Query_450</Iteration_query-ID>
|
jpayne@1
|
23185 <Iteration_query-def>fliC_g,m,s_Montevideostr_AHHS01000127_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23186 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23187 <Iteration_hits>
|
jpayne@1
|
23188 <Hit>
|
jpayne@1
|
23189 <Hit_num>1</Hit_num>
|
jpayne@1
|
23190 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23191 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23192 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23193 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23194 <Hit_hsps>
|
jpayne@1
|
23195 <Hsp>
|
jpayne@1
|
23196 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23197 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23198 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23199 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23200 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23201 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23202 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23203 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23204 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23205 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23206 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23207 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23208 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23209 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23210 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23211 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23212 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23213 </Hsp>
|
jpayne@1
|
23214 </Hit_hsps>
|
jpayne@1
|
23215 </Hit>
|
jpayne@1
|
23216 </Iteration_hits>
|
jpayne@1
|
23217 <Iteration_stat>
|
jpayne@1
|
23218 <Statistics>
|
jpayne@1
|
23219 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23220 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23221 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23222 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23223 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23224 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23225 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23226 </Statistics>
|
jpayne@1
|
23227 </Iteration_stat>
|
jpayne@1
|
23228 </Iteration>
|
jpayne@1
|
23229 <Iteration>
|
jpayne@1
|
23230 <Iteration_iter-num>451</Iteration_iter-num>
|
jpayne@1
|
23231 <Iteration_query-ID>Query_451</Iteration_query-ID>
|
jpayne@1
|
23232 <Iteration_query-def>fliC_g,m,s_Montevideostr_AHHT01000008_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23233 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23234 <Iteration_hits>
|
jpayne@1
|
23235 <Hit>
|
jpayne@1
|
23236 <Hit_num>1</Hit_num>
|
jpayne@1
|
23237 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23238 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23239 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23240 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23241 <Hit_hsps>
|
jpayne@1
|
23242 <Hsp>
|
jpayne@1
|
23243 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23244 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23245 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23246 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23247 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23248 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23249 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23250 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23251 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23252 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23253 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23254 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23255 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23256 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23257 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23258 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23259 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23260 </Hsp>
|
jpayne@1
|
23261 </Hit_hsps>
|
jpayne@1
|
23262 </Hit>
|
jpayne@1
|
23263 </Iteration_hits>
|
jpayne@1
|
23264 <Iteration_stat>
|
jpayne@1
|
23265 <Statistics>
|
jpayne@1
|
23266 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23267 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23268 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23269 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23270 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23271 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23272 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23273 </Statistics>
|
jpayne@1
|
23274 </Iteration_stat>
|
jpayne@1
|
23275 </Iteration>
|
jpayne@1
|
23276 <Iteration>
|
jpayne@1
|
23277 <Iteration_iter-num>452</Iteration_iter-num>
|
jpayne@1
|
23278 <Iteration_query-ID>Query_452</Iteration_query-ID>
|
jpayne@1
|
23279 <Iteration_query-def>fliC_g,m,s_Montevideostr_AHHU01000002_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23280 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23281 <Iteration_hits>
|
jpayne@1
|
23282 <Hit>
|
jpayne@1
|
23283 <Hit_num>1</Hit_num>
|
jpayne@1
|
23284 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23285 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23286 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23287 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23288 <Hit_hsps>
|
jpayne@1
|
23289 <Hsp>
|
jpayne@1
|
23290 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23291 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23292 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23293 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23294 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23295 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23296 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23297 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23298 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23299 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23300 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23301 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23302 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23303 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23304 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23305 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23306 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23307 </Hsp>
|
jpayne@1
|
23308 </Hit_hsps>
|
jpayne@1
|
23309 </Hit>
|
jpayne@1
|
23310 </Iteration_hits>
|
jpayne@1
|
23311 <Iteration_stat>
|
jpayne@1
|
23312 <Statistics>
|
jpayne@1
|
23313 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23314 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23315 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23316 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23317 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23318 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23319 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23320 </Statistics>
|
jpayne@1
|
23321 </Iteration_stat>
|
jpayne@1
|
23322 </Iteration>
|
jpayne@1
|
23323 <Iteration>
|
jpayne@1
|
23324 <Iteration_iter-num>453</Iteration_iter-num>
|
jpayne@1
|
23325 <Iteration_query-ID>Query_453</Iteration_query-ID>
|
jpayne@1
|
23326 <Iteration_query-def>fliC_g,m,s_Montevideostr_AHHV01000005_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23327 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23328 <Iteration_hits>
|
jpayne@1
|
23329 <Hit>
|
jpayne@1
|
23330 <Hit_num>1</Hit_num>
|
jpayne@1
|
23331 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23332 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23333 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23334 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23335 <Hit_hsps>
|
jpayne@1
|
23336 <Hsp>
|
jpayne@1
|
23337 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23338 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23339 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23340 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23341 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23342 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23343 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23344 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23345 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23346 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23347 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23348 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23349 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23350 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23351 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23352 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23353 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23354 </Hsp>
|
jpayne@1
|
23355 </Hit_hsps>
|
jpayne@1
|
23356 </Hit>
|
jpayne@1
|
23357 </Iteration_hits>
|
jpayne@1
|
23358 <Iteration_stat>
|
jpayne@1
|
23359 <Statistics>
|
jpayne@1
|
23360 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23361 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23362 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23363 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23364 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23365 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23366 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23367 </Statistics>
|
jpayne@1
|
23368 </Iteration_stat>
|
jpayne@1
|
23369 </Iteration>
|
jpayne@1
|
23370 <Iteration>
|
jpayne@1
|
23371 <Iteration_iter-num>454</Iteration_iter-num>
|
jpayne@1
|
23372 <Iteration_query-ID>Query_454</Iteration_query-ID>
|
jpayne@1
|
23373 <Iteration_query-def>fliC_g,m,s_Montevideostr_AHHW01000042_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23374 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23375 <Iteration_hits>
|
jpayne@1
|
23376 <Hit>
|
jpayne@1
|
23377 <Hit_num>1</Hit_num>
|
jpayne@1
|
23378 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23379 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23380 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23381 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23382 <Hit_hsps>
|
jpayne@1
|
23383 <Hsp>
|
jpayne@1
|
23384 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23385 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23386 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23387 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23388 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23389 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23390 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23391 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23392 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23393 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23394 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23395 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23396 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23397 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23398 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23399 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23400 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23401 </Hsp>
|
jpayne@1
|
23402 </Hit_hsps>
|
jpayne@1
|
23403 </Hit>
|
jpayne@1
|
23404 </Iteration_hits>
|
jpayne@1
|
23405 <Iteration_stat>
|
jpayne@1
|
23406 <Statistics>
|
jpayne@1
|
23407 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23408 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23409 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23410 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23411 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23412 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23413 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23414 </Statistics>
|
jpayne@1
|
23415 </Iteration_stat>
|
jpayne@1
|
23416 </Iteration>
|
jpayne@1
|
23417 <Iteration>
|
jpayne@1
|
23418 <Iteration_iter-num>455</Iteration_iter-num>
|
jpayne@1
|
23419 <Iteration_query-ID>Query_455</Iteration_query-ID>
|
jpayne@1
|
23420 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETR01000004_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23421 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23422 <Iteration_hits>
|
jpayne@1
|
23423 <Hit>
|
jpayne@1
|
23424 <Hit_num>1</Hit_num>
|
jpayne@1
|
23425 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23426 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23427 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23428 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23429 <Hit_hsps>
|
jpayne@1
|
23430 <Hsp>
|
jpayne@1
|
23431 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23432 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23433 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23434 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23435 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23436 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23437 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23438 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23439 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23440 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23441 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23442 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23443 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23444 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23445 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23446 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23447 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23448 </Hsp>
|
jpayne@1
|
23449 </Hit_hsps>
|
jpayne@1
|
23450 </Hit>
|
jpayne@1
|
23451 </Iteration_hits>
|
jpayne@1
|
23452 <Iteration_stat>
|
jpayne@1
|
23453 <Statistics>
|
jpayne@1
|
23454 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23455 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23456 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23457 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23458 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23459 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23460 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23461 </Statistics>
|
jpayne@1
|
23462 </Iteration_stat>
|
jpayne@1
|
23463 </Iteration>
|
jpayne@1
|
23464 <Iteration>
|
jpayne@1
|
23465 <Iteration_iter-num>456</Iteration_iter-num>
|
jpayne@1
|
23466 <Iteration_query-ID>Query_456</Iteration_query-ID>
|
jpayne@1
|
23467 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETS01000018_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23468 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23469 <Iteration_hits>
|
jpayne@1
|
23470 <Hit>
|
jpayne@1
|
23471 <Hit_num>1</Hit_num>
|
jpayne@1
|
23472 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23473 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23474 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23475 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23476 <Hit_hsps>
|
jpayne@1
|
23477 <Hsp>
|
jpayne@1
|
23478 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23479 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23480 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23481 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23482 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23483 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23484 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23485 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23486 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23487 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23488 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23489 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23490 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23491 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23492 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23493 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23494 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23495 </Hsp>
|
jpayne@1
|
23496 </Hit_hsps>
|
jpayne@1
|
23497 </Hit>
|
jpayne@1
|
23498 </Iteration_hits>
|
jpayne@1
|
23499 <Iteration_stat>
|
jpayne@1
|
23500 <Statistics>
|
jpayne@1
|
23501 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23502 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23503 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23504 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23505 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23506 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23507 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23508 </Statistics>
|
jpayne@1
|
23509 </Iteration_stat>
|
jpayne@1
|
23510 </Iteration>
|
jpayne@1
|
23511 <Iteration>
|
jpayne@1
|
23512 <Iteration_iter-num>457</Iteration_iter-num>
|
jpayne@1
|
23513 <Iteration_query-ID>Query_457</Iteration_query-ID>
|
jpayne@1
|
23514 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETT01000121_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23515 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23516 <Iteration_hits>
|
jpayne@1
|
23517 <Hit>
|
jpayne@1
|
23518 <Hit_num>1</Hit_num>
|
jpayne@1
|
23519 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23520 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23521 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23522 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23523 <Hit_hsps>
|
jpayne@1
|
23524 <Hsp>
|
jpayne@1
|
23525 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23526 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23527 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23528 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23529 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23530 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23531 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23532 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23533 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23534 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23535 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23536 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23537 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23538 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23539 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23540 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23541 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23542 </Hsp>
|
jpayne@1
|
23543 </Hit_hsps>
|
jpayne@1
|
23544 </Hit>
|
jpayne@1
|
23545 </Iteration_hits>
|
jpayne@1
|
23546 <Iteration_stat>
|
jpayne@1
|
23547 <Statistics>
|
jpayne@1
|
23548 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23549 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23550 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23551 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23552 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23553 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23554 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23555 </Statistics>
|
jpayne@1
|
23556 </Iteration_stat>
|
jpayne@1
|
23557 </Iteration>
|
jpayne@1
|
23558 <Iteration>
|
jpayne@1
|
23559 <Iteration_iter-num>458</Iteration_iter-num>
|
jpayne@1
|
23560 <Iteration_query-ID>Query_458</Iteration_query-ID>
|
jpayne@1
|
23561 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETU01000047_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23562 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23563 <Iteration_hits>
|
jpayne@1
|
23564 <Hit>
|
jpayne@1
|
23565 <Hit_num>1</Hit_num>
|
jpayne@1
|
23566 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23567 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23568 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23569 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23570 <Hit_hsps>
|
jpayne@1
|
23571 <Hsp>
|
jpayne@1
|
23572 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23573 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23574 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23575 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23576 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23577 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23578 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23579 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23580 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23581 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23582 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23583 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23584 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23585 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23586 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23587 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23588 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23589 </Hsp>
|
jpayne@1
|
23590 </Hit_hsps>
|
jpayne@1
|
23591 </Hit>
|
jpayne@1
|
23592 </Iteration_hits>
|
jpayne@1
|
23593 <Iteration_stat>
|
jpayne@1
|
23594 <Statistics>
|
jpayne@1
|
23595 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23596 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23597 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23598 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23599 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23600 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23601 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23602 </Statistics>
|
jpayne@1
|
23603 </Iteration_stat>
|
jpayne@1
|
23604 </Iteration>
|
jpayne@1
|
23605 <Iteration>
|
jpayne@1
|
23606 <Iteration_iter-num>459</Iteration_iter-num>
|
jpayne@1
|
23607 <Iteration_query-ID>Query_459</Iteration_query-ID>
|
jpayne@1
|
23608 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETV01000017_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23609 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23610 <Iteration_hits>
|
jpayne@1
|
23611 <Hit>
|
jpayne@1
|
23612 <Hit_num>1</Hit_num>
|
jpayne@1
|
23613 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23614 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23615 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23616 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23617 <Hit_hsps>
|
jpayne@1
|
23618 <Hsp>
|
jpayne@1
|
23619 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23620 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23621 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23622 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23623 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23624 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23625 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23626 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23627 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23628 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23629 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23630 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23631 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23632 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23633 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23634 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23635 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23636 </Hsp>
|
jpayne@1
|
23637 </Hit_hsps>
|
jpayne@1
|
23638 </Hit>
|
jpayne@1
|
23639 </Iteration_hits>
|
jpayne@1
|
23640 <Iteration_stat>
|
jpayne@1
|
23641 <Statistics>
|
jpayne@1
|
23642 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23643 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23644 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23645 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23646 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23647 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23648 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23649 </Statistics>
|
jpayne@1
|
23650 </Iteration_stat>
|
jpayne@1
|
23651 </Iteration>
|
jpayne@1
|
23652 <Iteration>
|
jpayne@1
|
23653 <Iteration_iter-num>460</Iteration_iter-num>
|
jpayne@1
|
23654 <Iteration_query-ID>Query_460</Iteration_query-ID>
|
jpayne@1
|
23655 <Iteration_query-def>fliC_g,m,s_Montevideostr_AHIK01000035_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23656 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23657 <Iteration_hits>
|
jpayne@1
|
23658 <Hit>
|
jpayne@1
|
23659 <Hit_num>1</Hit_num>
|
jpayne@1
|
23660 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23661 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23662 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23663 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23664 <Hit_hsps>
|
jpayne@1
|
23665 <Hsp>
|
jpayne@1
|
23666 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23667 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23668 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23669 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23670 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23671 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23672 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23673 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23674 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23675 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23676 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23677 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23678 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23679 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23680 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23681 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23682 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23683 </Hsp>
|
jpayne@1
|
23684 </Hit_hsps>
|
jpayne@1
|
23685 </Hit>
|
jpayne@1
|
23686 </Iteration_hits>
|
jpayne@1
|
23687 <Iteration_stat>
|
jpayne@1
|
23688 <Statistics>
|
jpayne@1
|
23689 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23690 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23691 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23692 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23693 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23694 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23695 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23696 </Statistics>
|
jpayne@1
|
23697 </Iteration_stat>
|
jpayne@1
|
23698 </Iteration>
|
jpayne@1
|
23699 <Iteration>
|
jpayne@1
|
23700 <Iteration_iter-num>461</Iteration_iter-num>
|
jpayne@1
|
23701 <Iteration_query-ID>Query_461</Iteration_query-ID>
|
jpayne@1
|
23702 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETW01000039_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23703 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23704 <Iteration_hits>
|
jpayne@1
|
23705 <Hit>
|
jpayne@1
|
23706 <Hit_num>1</Hit_num>
|
jpayne@1
|
23707 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23708 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23709 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23710 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23711 <Hit_hsps>
|
jpayne@1
|
23712 <Hsp>
|
jpayne@1
|
23713 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23714 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23715 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23716 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23717 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23718 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23719 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23720 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23721 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23722 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23723 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23724 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23725 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23726 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23727 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23728 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23729 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23730 </Hsp>
|
jpayne@1
|
23731 </Hit_hsps>
|
jpayne@1
|
23732 </Hit>
|
jpayne@1
|
23733 </Iteration_hits>
|
jpayne@1
|
23734 <Iteration_stat>
|
jpayne@1
|
23735 <Statistics>
|
jpayne@1
|
23736 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23737 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23738 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23739 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23740 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23741 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23742 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23743 </Statistics>
|
jpayne@1
|
23744 </Iteration_stat>
|
jpayne@1
|
23745 </Iteration>
|
jpayne@1
|
23746 <Iteration>
|
jpayne@1
|
23747 <Iteration_iter-num>462</Iteration_iter-num>
|
jpayne@1
|
23748 <Iteration_query-ID>Query_462</Iteration_query-ID>
|
jpayne@1
|
23749 <Iteration_query-def>fliC_g,m,s_Montevideostr_AEST01000016_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23750 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23751 <Iteration_hits>
|
jpayne@1
|
23752 <Hit>
|
jpayne@1
|
23753 <Hit_num>1</Hit_num>
|
jpayne@1
|
23754 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23755 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23756 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23757 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23758 <Hit_hsps>
|
jpayne@1
|
23759 <Hsp>
|
jpayne@1
|
23760 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23761 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23762 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23763 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23764 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23765 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23766 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23767 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23768 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23769 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23770 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23771 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23772 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23773 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23774 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23775 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23776 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23777 </Hsp>
|
jpayne@1
|
23778 </Hit_hsps>
|
jpayne@1
|
23779 </Hit>
|
jpayne@1
|
23780 </Iteration_hits>
|
jpayne@1
|
23781 <Iteration_stat>
|
jpayne@1
|
23782 <Statistics>
|
jpayne@1
|
23783 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23784 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23785 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23786 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23787 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23788 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23789 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23790 </Statistics>
|
jpayne@1
|
23791 </Iteration_stat>
|
jpayne@1
|
23792 </Iteration>
|
jpayne@1
|
23793 <Iteration>
|
jpayne@1
|
23794 <Iteration_iter-num>463</Iteration_iter-num>
|
jpayne@1
|
23795 <Iteration_query-ID>Query_463</Iteration_query-ID>
|
jpayne@1
|
23796 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETK01000014_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23797 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23798 <Iteration_hits>
|
jpayne@1
|
23799 <Hit>
|
jpayne@1
|
23800 <Hit_num>1</Hit_num>
|
jpayne@1
|
23801 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23802 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23803 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23804 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23805 <Hit_hsps>
|
jpayne@1
|
23806 <Hsp>
|
jpayne@1
|
23807 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23808 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23809 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23810 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23811 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23812 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23813 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23814 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23815 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23816 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23817 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23818 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23819 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23820 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23821 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23822 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23823 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23824 </Hsp>
|
jpayne@1
|
23825 </Hit_hsps>
|
jpayne@1
|
23826 </Hit>
|
jpayne@1
|
23827 </Iteration_hits>
|
jpayne@1
|
23828 <Iteration_stat>
|
jpayne@1
|
23829 <Statistics>
|
jpayne@1
|
23830 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23831 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23832 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23833 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23834 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23835 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23836 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23837 </Statistics>
|
jpayne@1
|
23838 </Iteration_stat>
|
jpayne@1
|
23839 </Iteration>
|
jpayne@1
|
23840 <Iteration>
|
jpayne@1
|
23841 <Iteration_iter-num>464</Iteration_iter-num>
|
jpayne@1
|
23842 <Iteration_query-ID>Query_464</Iteration_query-ID>
|
jpayne@1
|
23843 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETL01000157_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23844 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23845 <Iteration_hits>
|
jpayne@1
|
23846 <Hit>
|
jpayne@1
|
23847 <Hit_num>1</Hit_num>
|
jpayne@1
|
23848 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23849 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23850 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23851 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23852 <Hit_hsps>
|
jpayne@1
|
23853 <Hsp>
|
jpayne@1
|
23854 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23855 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23856 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23857 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23858 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23859 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23860 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23861 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23862 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23863 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23864 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23865 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23866 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23867 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23868 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23869 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23870 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23871 </Hsp>
|
jpayne@1
|
23872 </Hit_hsps>
|
jpayne@1
|
23873 </Hit>
|
jpayne@1
|
23874 </Iteration_hits>
|
jpayne@1
|
23875 <Iteration_stat>
|
jpayne@1
|
23876 <Statistics>
|
jpayne@1
|
23877 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23878 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23879 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23880 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23881 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23882 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23883 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23884 </Statistics>
|
jpayne@1
|
23885 </Iteration_stat>
|
jpayne@1
|
23886 </Iteration>
|
jpayne@1
|
23887 <Iteration>
|
jpayne@1
|
23888 <Iteration_iter-num>465</Iteration_iter-num>
|
jpayne@1
|
23889 <Iteration_query-ID>Query_465</Iteration_query-ID>
|
jpayne@1
|
23890 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETM01000185_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23891 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23892 <Iteration_hits>
|
jpayne@1
|
23893 <Hit>
|
jpayne@1
|
23894 <Hit_num>1</Hit_num>
|
jpayne@1
|
23895 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23896 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23897 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23898 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23899 <Hit_hsps>
|
jpayne@1
|
23900 <Hsp>
|
jpayne@1
|
23901 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23902 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23903 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23904 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23905 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23906 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23907 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23908 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23909 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23910 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23911 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23912 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23913 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23914 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23915 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23916 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23917 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23918 </Hsp>
|
jpayne@1
|
23919 </Hit_hsps>
|
jpayne@1
|
23920 </Hit>
|
jpayne@1
|
23921 </Iteration_hits>
|
jpayne@1
|
23922 <Iteration_stat>
|
jpayne@1
|
23923 <Statistics>
|
jpayne@1
|
23924 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23925 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23926 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23927 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23928 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23929 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23930 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23931 </Statistics>
|
jpayne@1
|
23932 </Iteration_stat>
|
jpayne@1
|
23933 </Iteration>
|
jpayne@1
|
23934 <Iteration>
|
jpayne@1
|
23935 <Iteration_iter-num>466</Iteration_iter-num>
|
jpayne@1
|
23936 <Iteration_query-ID>Query_466</Iteration_query-ID>
|
jpayne@1
|
23937 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETN01000014_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23938 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23939 <Iteration_hits>
|
jpayne@1
|
23940 <Hit>
|
jpayne@1
|
23941 <Hit_num>1</Hit_num>
|
jpayne@1
|
23942 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23943 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23944 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23945 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23946 <Hit_hsps>
|
jpayne@1
|
23947 <Hsp>
|
jpayne@1
|
23948 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23949 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23950 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23951 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23952 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
23953 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
23954 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
23955 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
23956 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
23957 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
23958 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
23959 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
23960 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
23961 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
23962 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
23963 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
23964 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
23965 </Hsp>
|
jpayne@1
|
23966 </Hit_hsps>
|
jpayne@1
|
23967 </Hit>
|
jpayne@1
|
23968 </Iteration_hits>
|
jpayne@1
|
23969 <Iteration_stat>
|
jpayne@1
|
23970 <Statistics>
|
jpayne@1
|
23971 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
23972 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
23973 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
23974 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
23975 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
23976 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
23977 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
23978 </Statistics>
|
jpayne@1
|
23979 </Iteration_stat>
|
jpayne@1
|
23980 </Iteration>
|
jpayne@1
|
23981 <Iteration>
|
jpayne@1
|
23982 <Iteration_iter-num>467</Iteration_iter-num>
|
jpayne@1
|
23983 <Iteration_query-ID>Query_467</Iteration_query-ID>
|
jpayne@1
|
23984 <Iteration_query-def>fliC_g,m,s_Montevideostr_AETA01000024_g,m__1506</Iteration_query-def>
|
jpayne@1
|
23985 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
23986 <Iteration_hits>
|
jpayne@1
|
23987 <Hit>
|
jpayne@1
|
23988 <Hit_num>1</Hit_num>
|
jpayne@1
|
23989 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
23990 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
23991 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
23992 <Hit_len>1962</Hit_len>
|
jpayne@1
|
23993 <Hit_hsps>
|
jpayne@1
|
23994 <Hsp>
|
jpayne@1
|
23995 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
23996 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
23997 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
23998 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
23999 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24000 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
24001 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24002 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
24003 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24004 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24005 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
24006 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
24007 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
24008 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
24009 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
24010 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
24011 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
24012 </Hsp>
|
jpayne@1
|
24013 </Hit_hsps>
|
jpayne@1
|
24014 </Hit>
|
jpayne@1
|
24015 </Iteration_hits>
|
jpayne@1
|
24016 <Iteration_stat>
|
jpayne@1
|
24017 <Statistics>
|
jpayne@1
|
24018 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24019 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24020 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24021 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
24022 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24023 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24024 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24025 </Statistics>
|
jpayne@1
|
24026 </Iteration_stat>
|
jpayne@1
|
24027 </Iteration>
|
jpayne@1
|
24028 <Iteration>
|
jpayne@1
|
24029 <Iteration_iter-num>468</Iteration_iter-num>
|
jpayne@1
|
24030 <Iteration_query-ID>Query_468</Iteration_query-ID>
|
jpayne@1
|
24031 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESO01000031_g,m__1506</Iteration_query-def>
|
jpayne@1
|
24032 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
24033 <Iteration_hits>
|
jpayne@1
|
24034 <Hit>
|
jpayne@1
|
24035 <Hit_num>1</Hit_num>
|
jpayne@1
|
24036 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24037 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24038 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24039 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24040 <Hit_hsps>
|
jpayne@1
|
24041 <Hsp>
|
jpayne@1
|
24042 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24043 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
24044 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
24045 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
24046 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24047 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
24048 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24049 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
24050 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24051 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24052 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
24053 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
24054 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
24055 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
24056 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
24057 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
24058 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
24059 </Hsp>
|
jpayne@1
|
24060 </Hit_hsps>
|
jpayne@1
|
24061 </Hit>
|
jpayne@1
|
24062 </Iteration_hits>
|
jpayne@1
|
24063 <Iteration_stat>
|
jpayne@1
|
24064 <Statistics>
|
jpayne@1
|
24065 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24066 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24067 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24068 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
24069 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24070 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24071 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24072 </Statistics>
|
jpayne@1
|
24073 </Iteration_stat>
|
jpayne@1
|
24074 </Iteration>
|
jpayne@1
|
24075 <Iteration>
|
jpayne@1
|
24076 <Iteration_iter-num>469</Iteration_iter-num>
|
jpayne@1
|
24077 <Iteration_query-ID>Query_469</Iteration_query-ID>
|
jpayne@1
|
24078 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESP01000070_g,m__1506</Iteration_query-def>
|
jpayne@1
|
24079 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
24080 <Iteration_hits>
|
jpayne@1
|
24081 <Hit>
|
jpayne@1
|
24082 <Hit_num>1</Hit_num>
|
jpayne@1
|
24083 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24084 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24085 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24086 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24087 <Hit_hsps>
|
jpayne@1
|
24088 <Hsp>
|
jpayne@1
|
24089 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24090 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
24091 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
24092 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
24093 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24094 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
24095 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24096 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
24097 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24098 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24099 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
24100 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
24101 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
24102 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
24103 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
24104 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
24105 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
24106 </Hsp>
|
jpayne@1
|
24107 </Hit_hsps>
|
jpayne@1
|
24108 </Hit>
|
jpayne@1
|
24109 </Iteration_hits>
|
jpayne@1
|
24110 <Iteration_stat>
|
jpayne@1
|
24111 <Statistics>
|
jpayne@1
|
24112 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24113 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24114 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24115 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
24116 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24117 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24118 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24119 </Statistics>
|
jpayne@1
|
24120 </Iteration_stat>
|
jpayne@1
|
24121 </Iteration>
|
jpayne@1
|
24122 <Iteration>
|
jpayne@1
|
24123 <Iteration_iter-num>470</Iteration_iter-num>
|
jpayne@1
|
24124 <Iteration_query-ID>Query_470</Iteration_query-ID>
|
jpayne@1
|
24125 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESU01000013_g,m__1506</Iteration_query-def>
|
jpayne@1
|
24126 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
24127 <Iteration_hits>
|
jpayne@1
|
24128 <Hit>
|
jpayne@1
|
24129 <Hit_num>1</Hit_num>
|
jpayne@1
|
24130 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24131 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24132 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24133 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24134 <Hit_hsps>
|
jpayne@1
|
24135 <Hsp>
|
jpayne@1
|
24136 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24137 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
24138 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
24139 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
24140 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24141 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
24142 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24143 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
24144 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24145 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24146 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
24147 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
24148 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
24149 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
24150 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
24151 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
24152 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
24153 </Hsp>
|
jpayne@1
|
24154 </Hit_hsps>
|
jpayne@1
|
24155 </Hit>
|
jpayne@1
|
24156 </Iteration_hits>
|
jpayne@1
|
24157 <Iteration_stat>
|
jpayne@1
|
24158 <Statistics>
|
jpayne@1
|
24159 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24160 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24161 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24162 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
24163 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24164 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24165 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24166 </Statistics>
|
jpayne@1
|
24167 </Iteration_stat>
|
jpayne@1
|
24168 </Iteration>
|
jpayne@1
|
24169 <Iteration>
|
jpayne@1
|
24170 <Iteration_iter-num>471</Iteration_iter-num>
|
jpayne@1
|
24171 <Iteration_query-ID>Query_471</Iteration_query-ID>
|
jpayne@1
|
24172 <Iteration_query-def>fliC_g,m,s_Montevideostr_AESR01000008_g,m__1506</Iteration_query-def>
|
jpayne@1
|
24173 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
24174 <Iteration_hits>
|
jpayne@1
|
24175 <Hit>
|
jpayne@1
|
24176 <Hit_num>1</Hit_num>
|
jpayne@1
|
24177 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24178 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24179 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24180 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24181 <Hit_hsps>
|
jpayne@1
|
24182 <Hsp>
|
jpayne@1
|
24183 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24184 <Hsp_bit-score>2621.52</Hsp_bit-score>
|
jpayne@1
|
24185 <Hsp_score>1419</Hsp_score>
|
jpayne@1
|
24186 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
24187 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24188 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
24189 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24190 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
24191 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24192 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24193 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
24194 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
24195 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
24196 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
24197 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTATGACACCTATGCAGCGGGTGCCAATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAATGGTCAGTTGACAACTGACGATGCGGAAAATAACACTGCGGTTAACCTATTCAAGACGACTAAATCTGCTGCTGGTACCGATGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTGATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTGCCACTGGCGCGACGGATGTTAATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
24198 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
24199 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||| ||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||| || |||| || || ||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
24200 </Hsp>
|
jpayne@1
|
24201 </Hit_hsps>
|
jpayne@1
|
24202 </Hit>
|
jpayne@1
|
24203 </Iteration_hits>
|
jpayne@1
|
24204 <Iteration_stat>
|
jpayne@1
|
24205 <Statistics>
|
jpayne@1
|
24206 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24207 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24208 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24209 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
24210 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24211 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24212 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24213 </Statistics>
|
jpayne@1
|
24214 </Iteration_stat>
|
jpayne@1
|
24215 </Iteration>
|
jpayne@1
|
24216 <Iteration>
|
jpayne@1
|
24217 <Iteration_iter-num>472</Iteration_iter-num>
|
jpayne@1
|
24218 <Iteration_query-ID>Query_472</Iteration_query-ID>
|
jpayne@1
|
24219 <Iteration_query-def>fliC_d_Muenchenstr_ARYX01000110_b,d,j__1488</Iteration_query-def>
|
jpayne@1
|
24220 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
24221 <Iteration_hits>
|
jpayne@1
|
24222 <Hit>
|
jpayne@1
|
24223 <Hit_num>1</Hit_num>
|
jpayne@1
|
24224 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24225 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24226 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24227 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24228 <Hit_hsps>
|
jpayne@1
|
24229 <Hsp>
|
jpayne@1
|
24230 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24231 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
24232 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
24233 <Hsp_evalue>5.11285e-126</Hsp_evalue>
|
jpayne@1
|
24234 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24235 <Hsp_query-to>380</Hsp_query-to>
|
jpayne@1
|
24236 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24237 <Hsp_hit-to>1364</Hsp_hit-to>
|
jpayne@1
|
24238 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24239 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24240 <Hsp_identity>334</Hsp_identity>
|
jpayne@1
|
24241 <Hsp_positive>334</Hsp_positive>
|
jpayne@1
|
24242 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24243 <Hsp_align-len>381</Hsp_align-len>
|
jpayne@1
|
24244 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATC</Hsp_qseq>
|
jpayne@1
|
24245 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTC</Hsp_hseq>
|
jpayne@1
|
24246 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || ||</Hsp_midline>
|
jpayne@1
|
24247 </Hsp>
|
jpayne@1
|
24248 </Hit_hsps>
|
jpayne@1
|
24249 </Hit>
|
jpayne@1
|
24250 </Iteration_hits>
|
jpayne@1
|
24251 <Iteration_stat>
|
jpayne@1
|
24252 <Statistics>
|
jpayne@1
|
24253 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24254 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24255 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24256 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
24257 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24258 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24259 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24260 </Statistics>
|
jpayne@1
|
24261 </Iteration_stat>
|
jpayne@1
|
24262 </Iteration>
|
jpayne@1
|
24263 <Iteration>
|
jpayne@1
|
24264 <Iteration_iter-num>473</Iteration_iter-num>
|
jpayne@1
|
24265 <Iteration_query-ID>Query_473</Iteration_query-ID>
|
jpayne@1
|
24266 <Iteration_query-def>fliC_d_Muenchenstr_ARYW01000085_b,d,j__1496</Iteration_query-def>
|
jpayne@1
|
24267 <Iteration_query-len>1496</Iteration_query-len>
|
jpayne@1
|
24268 <Iteration_hits>
|
jpayne@1
|
24269 <Hit>
|
jpayne@1
|
24270 <Hit_num>1</Hit_num>
|
jpayne@1
|
24271 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24272 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24273 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24274 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24275 <Hit_hsps>
|
jpayne@1
|
24276 <Hsp>
|
jpayne@1
|
24277 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24278 <Hsp_bit-score>490.482</Hsp_bit-score>
|
jpayne@1
|
24279 <Hsp_score>265</Hsp_score>
|
jpayne@1
|
24280 <Hsp_evalue>1.81009e-140</Hsp_evalue>
|
jpayne@1
|
24281 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24282 <Hsp_query-to>454</Hsp_query-to>
|
jpayne@1
|
24283 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24284 <Hsp_hit-to>1290</Hsp_hit-to>
|
jpayne@1
|
24285 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24286 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24287 <Hsp_identity>392</Hsp_identity>
|
jpayne@1
|
24288 <Hsp_positive>392</Hsp_positive>
|
jpayne@1
|
24289 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24290 <Hsp_align-len>455</Hsp_align-len>
|
jpayne@1
|
24291 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACG</Hsp_qseq>
|
jpayne@1
|
24292 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACG</Hsp_hseq>
|
jpayne@1
|
24293 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||</Hsp_midline>
|
jpayne@1
|
24294 </Hsp>
|
jpayne@1
|
24295 </Hit_hsps>
|
jpayne@1
|
24296 </Hit>
|
jpayne@1
|
24297 </Iteration_hits>
|
jpayne@1
|
24298 <Iteration_stat>
|
jpayne@1
|
24299 <Statistics>
|
jpayne@1
|
24300 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24301 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24302 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24303 <Statistics_eff-space>80840688</Statistics_eff-space>
|
jpayne@1
|
24304 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24305 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24306 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24307 </Statistics>
|
jpayne@1
|
24308 </Iteration_stat>
|
jpayne@1
|
24309 </Iteration>
|
jpayne@1
|
24310 <Iteration>
|
jpayne@1
|
24311 <Iteration_iter-num>474</Iteration_iter-num>
|
jpayne@1
|
24312 <Iteration_query-ID>Query_474</Iteration_query-ID>
|
jpayne@1
|
24313 <Iteration_query-def>fliC_d_Muenchenstr_AOXN01000006_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
24314 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
24315 <Iteration_hits>
|
jpayne@1
|
24316 <Hit>
|
jpayne@1
|
24317 <Hit_num>1</Hit_num>
|
jpayne@1
|
24318 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24319 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24320 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24321 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24322 <Hit_hsps>
|
jpayne@1
|
24323 <Hsp>
|
jpayne@1
|
24324 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24325 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
24326 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
24327 <Hsp_evalue>6.5212e-145</Hsp_evalue>
|
jpayne@1
|
24328 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24329 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
24330 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24331 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
24332 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24333 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24334 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
24335 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
24336 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24337 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
24338 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
24339 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
24340 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
24341 </Hsp>
|
jpayne@1
|
24342 </Hit_hsps>
|
jpayne@1
|
24343 </Hit>
|
jpayne@1
|
24344 </Iteration_hits>
|
jpayne@1
|
24345 <Iteration_stat>
|
jpayne@1
|
24346 <Statistics>
|
jpayne@1
|
24347 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24348 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24349 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24350 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
24351 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24352 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24353 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24354 </Statistics>
|
jpayne@1
|
24355 </Iteration_stat>
|
jpayne@1
|
24356 </Iteration>
|
jpayne@1
|
24357 <Iteration>
|
jpayne@1
|
24358 <Iteration_iter-num>475</Iteration_iter-num>
|
jpayne@1
|
24359 <Iteration_query-ID>Query_475</Iteration_query-ID>
|
jpayne@1
|
24360 <Iteration_query-def>fliC_d_Muenchenstr_AOYV01000177_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
24361 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
24362 <Iteration_hits>
|
jpayne@1
|
24363 <Hit>
|
jpayne@1
|
24364 <Hit_num>1</Hit_num>
|
jpayne@1
|
24365 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24366 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24367 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24368 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24369 <Hit_hsps>
|
jpayne@1
|
24370 <Hsp>
|
jpayne@1
|
24371 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24372 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
24373 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
24374 <Hsp_evalue>6.5212e-145</Hsp_evalue>
|
jpayne@1
|
24375 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24376 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
24377 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24378 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
24379 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24380 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24381 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
24382 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
24383 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24384 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
24385 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
24386 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
24387 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
24388 </Hsp>
|
jpayne@1
|
24389 </Hit_hsps>
|
jpayne@1
|
24390 </Hit>
|
jpayne@1
|
24391 </Iteration_hits>
|
jpayne@1
|
24392 <Iteration_stat>
|
jpayne@1
|
24393 <Statistics>
|
jpayne@1
|
24394 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24395 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24396 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24397 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
24398 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24399 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24400 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24401 </Statistics>
|
jpayne@1
|
24402 </Iteration_stat>
|
jpayne@1
|
24403 </Iteration>
|
jpayne@1
|
24404 <Iteration>
|
jpayne@1
|
24405 <Iteration_iter-num>476</Iteration_iter-num>
|
jpayne@1
|
24406 <Iteration_query-ID>Query_476</Iteration_query-ID>
|
jpayne@1
|
24407 <Iteration_query-def>fliC_d_Muenchenstr_AOYT01000015_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
24408 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
24409 <Iteration_hits>
|
jpayne@1
|
24410 <Hit>
|
jpayne@1
|
24411 <Hit_num>1</Hit_num>
|
jpayne@1
|
24412 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24413 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24414 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24415 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24416 <Hit_hsps>
|
jpayne@1
|
24417 <Hsp>
|
jpayne@1
|
24418 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24419 <Hsp_bit-score>510.796</Hsp_bit-score>
|
jpayne@1
|
24420 <Hsp_score>276</Hsp_score>
|
jpayne@1
|
24421 <Hsp_evalue>1.40164e-146</Hsp_evalue>
|
jpayne@1
|
24422 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24423 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
24424 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24425 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
24426 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24427 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24428 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
24429 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
24430 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24431 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
24432 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
24433 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
24434 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
24435 </Hsp>
|
jpayne@1
|
24436 </Hit_hsps>
|
jpayne@1
|
24437 </Hit>
|
jpayne@1
|
24438 </Iteration_hits>
|
jpayne@1
|
24439 <Iteration_stat>
|
jpayne@1
|
24440 <Statistics>
|
jpayne@1
|
24441 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24442 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24443 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24444 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
24445 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24446 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24447 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24448 </Statistics>
|
jpayne@1
|
24449 </Iteration_stat>
|
jpayne@1
|
24450 </Iteration>
|
jpayne@1
|
24451 <Iteration>
|
jpayne@1
|
24452 <Iteration_iter-num>477</Iteration_iter-num>
|
jpayne@1
|
24453 <Iteration_query-ID>Query_477</Iteration_query-ID>
|
jpayne@1
|
24454 <Iteration_query-def>fliC_z4,z23_Namurstr_AWGG01000011_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
24455 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
24456 <Iteration_hits>
|
jpayne@1
|
24457 <Hit>
|
jpayne@1
|
24458 <Hit_num>1</Hit_num>
|
jpayne@1
|
24459 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24460 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24461 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24462 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24463 <Hit_hsps>
|
jpayne@1
|
24464 <Hsp>
|
jpayne@1
|
24465 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24466 <Hsp_bit-score>442.47</Hsp_bit-score>
|
jpayne@1
|
24467 <Hsp_score>239</Hsp_score>
|
jpayne@1
|
24468 <Hsp_evalue>4.3094e-126</Hsp_evalue>
|
jpayne@1
|
24469 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24470 <Hsp_query-to>368</Hsp_query-to>
|
jpayne@1
|
24471 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24472 <Hsp_hit-to>1376</Hsp_hit-to>
|
jpayne@1
|
24473 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24474 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24475 <Hsp_identity>325</Hsp_identity>
|
jpayne@1
|
24476 <Hsp_positive>325</Hsp_positive>
|
jpayne@1
|
24477 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
24478 <Hsp_align-len>368</Hsp_align-len>
|
jpayne@1
|
24479 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAATGCGAACGACGGTATTTCCATTGCGCAGACCACTGAAGGCGCGTTAAACGAAATTAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCGAACGGCTCAAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAAT</Hsp_qseq>
|
jpayne@1
|
24480 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAAT</Hsp_hseq>
|
jpayne@1
|
24481 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||| || |||||||| ||||| |||||||||||||||||||| ||| | || ||||||||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | |||||</Hsp_midline>
|
jpayne@1
|
24482 </Hsp>
|
jpayne@1
|
24483 <Hsp>
|
jpayne@1
|
24484 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
24485 <Hsp_bit-score>195.019</Hsp_bit-score>
|
jpayne@1
|
24486 <Hsp_score>105</Hsp_score>
|
jpayne@1
|
24487 <Hsp_evalue>1.33231e-51</Hsp_evalue>
|
jpayne@1
|
24488 <Hsp_query-from>1072</Hsp_query-from>
|
jpayne@1
|
24489 <Hsp_query-to>1257</Hsp_query-to>
|
jpayne@1
|
24490 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
24491 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
24492 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24493 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24494 <Hsp_identity>159</Hsp_identity>
|
jpayne@1
|
24495 <Hsp_positive>159</Hsp_positive>
|
jpayne@1
|
24496 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
24497 <Hsp_align-len>186</Hsp_align-len>
|
jpayne@1
|
24498 <Hsp_qseq>AACCGTTTTGAATCTGCCATCACTAACCTGGGCAACACCGTCAACAACCTGTCTTCTGCACGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
24499 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
24500 <Hsp_midline>||||||||||| || ||||| || ||||| ||||| || || | ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
24501 </Hsp>
|
jpayne@1
|
24502 </Hit_hsps>
|
jpayne@1
|
24503 </Hit>
|
jpayne@1
|
24504 </Iteration_hits>
|
jpayne@1
|
24505 <Iteration_stat>
|
jpayne@1
|
24506 <Statistics>
|
jpayne@1
|
24507 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24508 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24509 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24510 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
24511 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24512 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24513 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24514 </Statistics>
|
jpayne@1
|
24515 </Iteration_stat>
|
jpayne@1
|
24516 </Iteration>
|
jpayne@1
|
24517 <Iteration>
|
jpayne@1
|
24518 <Iteration_iter-num>478</Iteration_iter-num>
|
jpayne@1
|
24519 <Iteration_query-ID>Query_478</Iteration_query-ID>
|
jpayne@1
|
24520 <Iteration_query-def>fliC_b_ParatyphiBstr_AOXH01000168_b,d,j__1476</Iteration_query-def>
|
jpayne@1
|
24521 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
24522 <Iteration_hits>
|
jpayne@1
|
24523 <Hit>
|
jpayne@1
|
24524 <Hit_num>1</Hit_num>
|
jpayne@1
|
24525 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24526 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24527 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24528 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24529 <Hit_hsps>
|
jpayne@1
|
24530 <Hsp>
|
jpayne@1
|
24531 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24532 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
24533 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
24534 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
24535 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24536 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
24537 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24538 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
24539 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24540 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24541 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
24542 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
24543 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24544 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
24545 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
24546 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
24547 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
24548 </Hsp>
|
jpayne@1
|
24549 <Hsp>
|
jpayne@1
|
24550 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
24551 <Hsp_bit-score>195.019</Hsp_bit-score>
|
jpayne@1
|
24552 <Hsp_score>105</Hsp_score>
|
jpayne@1
|
24553 <Hsp_evalue>1.56781e-51</Hsp_evalue>
|
jpayne@1
|
24554 <Hsp_query-from>1219</Hsp_query-from>
|
jpayne@1
|
24555 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
24556 <Hsp_hit-from>495</Hsp_hit-from>
|
jpayne@1
|
24557 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
24558 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24559 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24560 <Hsp_identity>208</Hsp_identity>
|
jpayne@1
|
24561 <Hsp_positive>208</Hsp_positive>
|
jpayne@1
|
24562 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24563 <Hsp_align-len>259</Hsp_align-len>
|
jpayne@1
|
24564 <Hsp_qseq>AACCCGCTGGCTAAAATTGATGCCGCGCTGGCGCAAGTTGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCCCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
24565 <Hsp_hseq>AACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
24566 <Hsp_midline>||||| |||||| ||||||| | || || | |||| || || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| ||| ||| || ||||||||||||||||||||| | ||||| || || ||||| || || ||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
24567 </Hsp>
|
jpayne@1
|
24568 </Hit_hsps>
|
jpayne@1
|
24569 </Hit>
|
jpayne@1
|
24570 </Iteration_hits>
|
jpayne@1
|
24571 <Iteration_stat>
|
jpayne@1
|
24572 <Statistics>
|
jpayne@1
|
24573 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24574 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24575 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24576 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
24577 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24578 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24579 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24580 </Statistics>
|
jpayne@1
|
24581 </Iteration_stat>
|
jpayne@1
|
24582 </Iteration>
|
jpayne@1
|
24583 <Iteration>
|
jpayne@1
|
24584 <Iteration_iter-num>479</Iteration_iter-num>
|
jpayne@1
|
24585 <Iteration_query-ID>Query_479</Iteration_query-ID>
|
jpayne@1
|
24586 <Iteration_query-def>fliC_y_Pomonastr_AHIA01000046_other.y__1509</Iteration_query-def>
|
jpayne@1
|
24587 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
24588 <Iteration_hits>
|
jpayne@1
|
24589 <Hit>
|
jpayne@1
|
24590 <Hit_num>1</Hit_num>
|
jpayne@1
|
24591 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24592 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24593 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24594 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24595 <Hit_hsps>
|
jpayne@1
|
24596 <Hsp>
|
jpayne@1
|
24597 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24598 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
24599 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
24600 <Hsp_evalue>1.43171e-131</Hsp_evalue>
|
jpayne@1
|
24601 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24602 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
24603 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24604 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
24605 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24606 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24607 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
24608 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
24609 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24610 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
24611 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
24612 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
24613 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
24614 </Hsp>
|
jpayne@1
|
24615 </Hit_hsps>
|
jpayne@1
|
24616 </Hit>
|
jpayne@1
|
24617 </Iteration_hits>
|
jpayne@1
|
24618 <Iteration_stat>
|
jpayne@1
|
24619 <Statistics>
|
jpayne@1
|
24620 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24621 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24622 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24623 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
24624 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24625 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24626 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24627 </Statistics>
|
jpayne@1
|
24628 </Iteration_stat>
|
jpayne@1
|
24629 </Iteration>
|
jpayne@1
|
24630 <Iteration>
|
jpayne@1
|
24631 <Iteration_iter-num>480</Iteration_iter-num>
|
jpayne@1
|
24632 <Iteration_query-ID>Query_480</Iteration_query-ID>
|
jpayne@1
|
24633 <Iteration_query-def>fliC_f,g_Rissenstr_AHUI01000019_g,m__1506</Iteration_query-def>
|
jpayne@1
|
24634 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
24635 <Iteration_hits>
|
jpayne@1
|
24636 <Hit>
|
jpayne@1
|
24637 <Hit_num>1</Hit_num>
|
jpayne@1
|
24638 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24639 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24640 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24641 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24642 <Hit_hsps>
|
jpayne@1
|
24643 <Hsp>
|
jpayne@1
|
24644 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24645 <Hsp_bit-score>2560.58</Hsp_bit-score>
|
jpayne@1
|
24646 <Hsp_score>1386</Hsp_score>
|
jpayne@1
|
24647 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
24648 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24649 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
24650 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24651 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
24652 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24653 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24654 <Hsp_identity>1466</Hsp_identity>
|
jpayne@1
|
24655 <Hsp_positive>1466</Hsp_positive>
|
jpayne@1
|
24656 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
24657 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
24658 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGTTTCACGTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAACGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAGTCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGAATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGACCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGTAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGGTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTTTACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAAGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCACGGGTGATAAGATCACCTTAGCAGGCAAAACCATGTTTATTGACAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCTAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
24659 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
24660 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| ||||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||||||||||||||||||||| |||||| ||||||||| ||| ||| ||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||| |||||||||||||||||||| ||||||||||||||||| ||||||||||||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
24661 </Hsp>
|
jpayne@1
|
24662 </Hit_hsps>
|
jpayne@1
|
24663 </Hit>
|
jpayne@1
|
24664 </Iteration_hits>
|
jpayne@1
|
24665 <Iteration_stat>
|
jpayne@1
|
24666 <Statistics>
|
jpayne@1
|
24667 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24668 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24669 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24670 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
24671 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24672 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24673 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24674 </Statistics>
|
jpayne@1
|
24675 </Iteration_stat>
|
jpayne@1
|
24676 </Iteration>
|
jpayne@1
|
24677 <Iteration>
|
jpayne@1
|
24678 <Iteration_iter-num>481</Iteration_iter-num>
|
jpayne@1
|
24679 <Iteration_query-ID>Query_481</Iteration_query-ID>
|
jpayne@1
|
24680 <Iteration_query-def>fliC_r_Rubislawstr_AOYA01000064_r,i__1470</Iteration_query-def>
|
jpayne@1
|
24681 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
24682 <Iteration_hits>
|
jpayne@1
|
24683 <Hit>
|
jpayne@1
|
24684 <Hit_num>1</Hit_num>
|
jpayne@1
|
24685 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24686 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24687 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24688 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24689 <Hit_hsps>
|
jpayne@1
|
24690 <Hsp>
|
jpayne@1
|
24691 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24692 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
24693 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
24694 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
24695 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24696 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
24697 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24698 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
24699 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24700 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24701 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
24702 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
24703 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24704 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
24705 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
24706 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
24707 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
24708 </Hsp>
|
jpayne@1
|
24709 </Hit_hsps>
|
jpayne@1
|
24710 </Hit>
|
jpayne@1
|
24711 </Iteration_hits>
|
jpayne@1
|
24712 <Iteration_stat>
|
jpayne@1
|
24713 <Statistics>
|
jpayne@1
|
24714 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24715 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24716 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24717 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
24718 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24719 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24720 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24721 </Statistics>
|
jpayne@1
|
24722 </Iteration_stat>
|
jpayne@1
|
24723 </Iteration>
|
jpayne@1
|
24724 <Iteration>
|
jpayne@1
|
24725 <Iteration_iter-num>482</Iteration_iter-num>
|
jpayne@1
|
24726 <Iteration_query-ID>Query_482</Iteration_query-ID>
|
jpayne@1
|
24727 <Iteration_query-def>fliC_e,h_Saintpaulstr_AYDS01000023_e__1497</Iteration_query-def>
|
jpayne@1
|
24728 <Iteration_query-len>1497</Iteration_query-len>
|
jpayne@1
|
24729 <Iteration_hits>
|
jpayne@1
|
24730 <Hit>
|
jpayne@1
|
24731 <Hit_num>1</Hit_num>
|
jpayne@1
|
24732 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24733 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24734 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24735 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24736 <Hit_hsps>
|
jpayne@1
|
24737 <Hsp>
|
jpayne@1
|
24738 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24739 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
24740 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
24741 <Hsp_evalue>6.51464e-140</Hsp_evalue>
|
jpayne@1
|
24742 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24743 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
24744 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24745 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
24746 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24747 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24748 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
24749 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
24750 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24751 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
24752 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
24753 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
24754 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
24755 </Hsp>
|
jpayne@1
|
24756 </Hit_hsps>
|
jpayne@1
|
24757 </Hit>
|
jpayne@1
|
24758 </Iteration_hits>
|
jpayne@1
|
24759 <Iteration_stat>
|
jpayne@1
|
24760 <Statistics>
|
jpayne@1
|
24761 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24762 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24763 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24764 <Statistics_eff-space>80895384</Statistics_eff-space>
|
jpayne@1
|
24765 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24766 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24767 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24768 </Statistics>
|
jpayne@1
|
24769 </Iteration_stat>
|
jpayne@1
|
24770 </Iteration>
|
jpayne@1
|
24771 <Iteration>
|
jpayne@1
|
24772 <Iteration_iter-num>483</Iteration_iter-num>
|
jpayne@1
|
24773 <Iteration_query-ID>Query_483</Iteration_query-ID>
|
jpayne@1
|
24774 <Iteration_query-def>fliC_e,h_Saintpaulstr_AOXY01000026_e__1497</Iteration_query-def>
|
jpayne@1
|
24775 <Iteration_query-len>1497</Iteration_query-len>
|
jpayne@1
|
24776 <Iteration_hits>
|
jpayne@1
|
24777 <Hit>
|
jpayne@1
|
24778 <Hit_num>1</Hit_num>
|
jpayne@1
|
24779 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24780 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24781 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24782 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24783 <Hit_hsps>
|
jpayne@1
|
24784 <Hsp>
|
jpayne@1
|
24785 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24786 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
24787 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
24788 <Hsp_evalue>6.51464e-140</Hsp_evalue>
|
jpayne@1
|
24789 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24790 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
24791 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24792 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
24793 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24794 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24795 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
24796 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
24797 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24798 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
24799 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
24800 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
24801 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
24802 </Hsp>
|
jpayne@1
|
24803 </Hit_hsps>
|
jpayne@1
|
24804 </Hit>
|
jpayne@1
|
24805 </Iteration_hits>
|
jpayne@1
|
24806 <Iteration_stat>
|
jpayne@1
|
24807 <Statistics>
|
jpayne@1
|
24808 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24809 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24810 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24811 <Statistics_eff-space>80895384</Statistics_eff-space>
|
jpayne@1
|
24812 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24813 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24814 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24815 </Statistics>
|
jpayne@1
|
24816 </Iteration_stat>
|
jpayne@1
|
24817 </Iteration>
|
jpayne@1
|
24818 <Iteration>
|
jpayne@1
|
24819 <Iteration_iter-num>484</Iteration_iter-num>
|
jpayne@1
|
24820 <Iteration_query-ID>Query_484</Iteration_query-ID>
|
jpayne@1
|
24821 <Iteration_query-def>fliC_e,h_Saintpaulstr_ABAM02000001_e__1497</Iteration_query-def>
|
jpayne@1
|
24822 <Iteration_query-len>1497</Iteration_query-len>
|
jpayne@1
|
24823 <Iteration_hits>
|
jpayne@1
|
24824 <Hit>
|
jpayne@1
|
24825 <Hit_num>1</Hit_num>
|
jpayne@1
|
24826 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24827 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24828 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24829 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24830 <Hit_hsps>
|
jpayne@1
|
24831 <Hsp>
|
jpayne@1
|
24832 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24833 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
24834 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
24835 <Hsp_evalue>6.51464e-140</Hsp_evalue>
|
jpayne@1
|
24836 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24837 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
24838 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24839 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
24840 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24841 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24842 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
24843 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
24844 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24845 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
24846 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
24847 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
24848 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
24849 </Hsp>
|
jpayne@1
|
24850 </Hit_hsps>
|
jpayne@1
|
24851 </Hit>
|
jpayne@1
|
24852 </Iteration_hits>
|
jpayne@1
|
24853 <Iteration_stat>
|
jpayne@1
|
24854 <Statistics>
|
jpayne@1
|
24855 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24856 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24857 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24858 <Statistics_eff-space>80895384</Statistics_eff-space>
|
jpayne@1
|
24859 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24860 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24861 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24862 </Statistics>
|
jpayne@1
|
24863 </Iteration_stat>
|
jpayne@1
|
24864 </Iteration>
|
jpayne@1
|
24865 <Iteration>
|
jpayne@1
|
24866 <Iteration_iter-num>485</Iteration_iter-num>
|
jpayne@1
|
24867 <Iteration_query-ID>Query_485</Iteration_query-ID>
|
jpayne@1
|
24868 <Iteration_query-def>fliC_e,h_Saintpaulstr_AOXF01000060_e__1497</Iteration_query-def>
|
jpayne@1
|
24869 <Iteration_query-len>1497</Iteration_query-len>
|
jpayne@1
|
24870 <Iteration_hits>
|
jpayne@1
|
24871 <Hit>
|
jpayne@1
|
24872 <Hit_num>1</Hit_num>
|
jpayne@1
|
24873 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24874 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24875 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24876 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24877 <Hit_hsps>
|
jpayne@1
|
24878 <Hsp>
|
jpayne@1
|
24879 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24880 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
24881 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
24882 <Hsp_evalue>6.51464e-140</Hsp_evalue>
|
jpayne@1
|
24883 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24884 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
24885 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24886 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
24887 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24888 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24889 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
24890 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
24891 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24892 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
24893 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
24894 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
24895 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
24896 </Hsp>
|
jpayne@1
|
24897 </Hit_hsps>
|
jpayne@1
|
24898 </Hit>
|
jpayne@1
|
24899 </Iteration_hits>
|
jpayne@1
|
24900 <Iteration_stat>
|
jpayne@1
|
24901 <Statistics>
|
jpayne@1
|
24902 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24903 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24904 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24905 <Statistics_eff-space>80895384</Statistics_eff-space>
|
jpayne@1
|
24906 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24907 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24908 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24909 </Statistics>
|
jpayne@1
|
24910 </Iteration_stat>
|
jpayne@1
|
24911 </Iteration>
|
jpayne@1
|
24912 <Iteration>
|
jpayne@1
|
24913 <Iteration_iter-num>486</Iteration_iter-num>
|
jpayne@1
|
24914 <Iteration_query-ID>Query_486</Iteration_query-ID>
|
jpayne@1
|
24915 <Iteration_query-def>fliC_d_Schwarzengrundstr_ABEJ01000027_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
24916 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
24917 <Iteration_hits>
|
jpayne@1
|
24918 <Hit>
|
jpayne@1
|
24919 <Hit_num>1</Hit_num>
|
jpayne@1
|
24920 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24921 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24922 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24923 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24924 <Hit_hsps>
|
jpayne@1
|
24925 <Hsp>
|
jpayne@1
|
24926 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24927 <Hsp_bit-score>510.796</Hsp_bit-score>
|
jpayne@1
|
24928 <Hsp_score>276</Hsp_score>
|
jpayne@1
|
24929 <Hsp_evalue>1.40164e-146</Hsp_evalue>
|
jpayne@1
|
24930 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24931 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
24932 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24933 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
24934 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24935 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24936 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
24937 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
24938 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
24939 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
24940 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGAGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
24941 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
24942 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
24943 </Hsp>
|
jpayne@1
|
24944 <Hsp>
|
jpayne@1
|
24945 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
24946 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
24947 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
24948 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
24949 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
24950 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
24951 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
24952 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
24953 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
24954 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
24955 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
24956 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
24957 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
24958 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
24959 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
24960 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
24961 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
24962 </Hsp>
|
jpayne@1
|
24963 </Hit_hsps>
|
jpayne@1
|
24964 </Hit>
|
jpayne@1
|
24965 </Iteration_hits>
|
jpayne@1
|
24966 <Iteration_stat>
|
jpayne@1
|
24967 <Statistics>
|
jpayne@1
|
24968 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
24969 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
24970 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
24971 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
24972 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
24973 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
24974 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
24975 </Statistics>
|
jpayne@1
|
24976 </Iteration_stat>
|
jpayne@1
|
24977 </Iteration>
|
jpayne@1
|
24978 <Iteration>
|
jpayne@1
|
24979 <Iteration_iter-num>487</Iteration_iter-num>
|
jpayne@1
|
24980 <Iteration_query-ID>Query_487</Iteration_query-ID>
|
jpayne@1
|
24981 <Iteration_query-def>fliC_g,s,t_Senftenbergstr_AOYU01000052_g,m__1506</Iteration_query-def>
|
jpayne@1
|
24982 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
24983 <Iteration_hits>
|
jpayne@1
|
24984 <Hit>
|
jpayne@1
|
24985 <Hit_num>1</Hit_num>
|
jpayne@1
|
24986 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
24987 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
24988 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
24989 <Hit_len>1962</Hit_len>
|
jpayne@1
|
24990 <Hit_hsps>
|
jpayne@1
|
24991 <Hsp>
|
jpayne@1
|
24992 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
24993 <Hsp_bit-score>2743.4</Hsp_bit-score>
|
jpayne@1
|
24994 <Hsp_score>1485</Hsp_score>
|
jpayne@1
|
24995 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
24996 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
24997 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
24998 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
24999 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25000 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25001 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25002 <Hsp_identity>1499</Hsp_identity>
|
jpayne@1
|
25003 <Hsp_positive>1499</Hsp_positive>
|
jpayne@1
|
25004 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25005 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
25006 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25007 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25008 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25009 </Hsp>
|
jpayne@1
|
25010 </Hit_hsps>
|
jpayne@1
|
25011 </Hit>
|
jpayne@1
|
25012 </Iteration_hits>
|
jpayne@1
|
25013 <Iteration_stat>
|
jpayne@1
|
25014 <Statistics>
|
jpayne@1
|
25015 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25016 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25017 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25018 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
25019 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25020 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25021 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25022 </Statistics>
|
jpayne@1
|
25023 </Iteration_stat>
|
jpayne@1
|
25024 </Iteration>
|
jpayne@1
|
25025 <Iteration>
|
jpayne@1
|
25026 <Iteration_iter-num>488</Iteration_iter-num>
|
jpayne@1
|
25027 <Iteration_query-ID>Query_488</Iteration_query-ID>
|
jpayne@1
|
25028 <Iteration_query-def>fliC_g,s,t_Senftenbergstr_AYDO01000098_g,m__1506</Iteration_query-def>
|
jpayne@1
|
25029 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
25030 <Iteration_hits>
|
jpayne@1
|
25031 <Hit>
|
jpayne@1
|
25032 <Hit_num>1</Hit_num>
|
jpayne@1
|
25033 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25034 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25035 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25036 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25037 <Hit_hsps>
|
jpayne@1
|
25038 <Hsp>
|
jpayne@1
|
25039 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25040 <Hsp_bit-score>2743.4</Hsp_bit-score>
|
jpayne@1
|
25041 <Hsp_score>1485</Hsp_score>
|
jpayne@1
|
25042 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
25043 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25044 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
25045 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25046 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25047 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25048 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25049 <Hsp_identity>1499</Hsp_identity>
|
jpayne@1
|
25050 <Hsp_positive>1499</Hsp_positive>
|
jpayne@1
|
25051 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25052 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
25053 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25054 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25055 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25056 </Hsp>
|
jpayne@1
|
25057 </Hit_hsps>
|
jpayne@1
|
25058 </Hit>
|
jpayne@1
|
25059 </Iteration_hits>
|
jpayne@1
|
25060 <Iteration_stat>
|
jpayne@1
|
25061 <Statistics>
|
jpayne@1
|
25062 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25063 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25064 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25065 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
25066 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25067 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25068 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25069 </Statistics>
|
jpayne@1
|
25070 </Iteration_stat>
|
jpayne@1
|
25071 </Iteration>
|
jpayne@1
|
25072 <Iteration>
|
jpayne@1
|
25073 <Iteration_iter-num>489</Iteration_iter-num>
|
jpayne@1
|
25074 <Iteration_query-ID>Query_489</Iteration_query-ID>
|
jpayne@1
|
25075 <Iteration_query-def>fliC_g,s,t_Senftenbergstr_AYDP01000091_g,m__1506</Iteration_query-def>
|
jpayne@1
|
25076 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
25077 <Iteration_hits>
|
jpayne@1
|
25078 <Hit>
|
jpayne@1
|
25079 <Hit_num>1</Hit_num>
|
jpayne@1
|
25080 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25081 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25082 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25083 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25084 <Hit_hsps>
|
jpayne@1
|
25085 <Hsp>
|
jpayne@1
|
25086 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25087 <Hsp_bit-score>2743.4</Hsp_bit-score>
|
jpayne@1
|
25088 <Hsp_score>1485</Hsp_score>
|
jpayne@1
|
25089 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
25090 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25091 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
25092 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25093 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25094 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25095 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25096 <Hsp_identity>1499</Hsp_identity>
|
jpayne@1
|
25097 <Hsp_positive>1499</Hsp_positive>
|
jpayne@1
|
25098 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25099 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
25100 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25101 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25102 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25103 </Hsp>
|
jpayne@1
|
25104 </Hit_hsps>
|
jpayne@1
|
25105 </Hit>
|
jpayne@1
|
25106 </Iteration_hits>
|
jpayne@1
|
25107 <Iteration_stat>
|
jpayne@1
|
25108 <Statistics>
|
jpayne@1
|
25109 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25110 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25111 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25112 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
25113 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25114 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25115 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25116 </Statistics>
|
jpayne@1
|
25117 </Iteration_stat>
|
jpayne@1
|
25118 </Iteration>
|
jpayne@1
|
25119 <Iteration>
|
jpayne@1
|
25120 <Iteration_iter-num>490</Iteration_iter-num>
|
jpayne@1
|
25121 <Iteration_query-ID>Query_490</Iteration_query-ID>
|
jpayne@1
|
25122 <Iteration_query-def>fliC_g,s,t_Senftenbergstr_AOYP01000022_g,m__1506</Iteration_query-def>
|
jpayne@1
|
25123 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
25124 <Iteration_hits>
|
jpayne@1
|
25125 <Hit>
|
jpayne@1
|
25126 <Hit_num>1</Hit_num>
|
jpayne@1
|
25127 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25128 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25129 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25130 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25131 <Hit_hsps>
|
jpayne@1
|
25132 <Hsp>
|
jpayne@1
|
25133 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25134 <Hsp_bit-score>2743.4</Hsp_bit-score>
|
jpayne@1
|
25135 <Hsp_score>1485</Hsp_score>
|
jpayne@1
|
25136 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
25137 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25138 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
25139 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25140 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25141 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25142 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25143 <Hsp_identity>1499</Hsp_identity>
|
jpayne@1
|
25144 <Hsp_positive>1499</Hsp_positive>
|
jpayne@1
|
25145 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25146 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
25147 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25148 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25149 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25150 </Hsp>
|
jpayne@1
|
25151 </Hit_hsps>
|
jpayne@1
|
25152 </Hit>
|
jpayne@1
|
25153 </Iteration_hits>
|
jpayne@1
|
25154 <Iteration_stat>
|
jpayne@1
|
25155 <Statistics>
|
jpayne@1
|
25156 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25157 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25158 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25159 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
25160 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25161 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25162 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25163 </Statistics>
|
jpayne@1
|
25164 </Iteration_stat>
|
jpayne@1
|
25165 </Iteration>
|
jpayne@1
|
25166 <Iteration>
|
jpayne@1
|
25167 <Iteration_iter-num>491</Iteration_iter-num>
|
jpayne@1
|
25168 <Iteration_query-ID>Query_491</Iteration_query-ID>
|
jpayne@1
|
25169 <Iteration_query-def>fliC_g,s,t_Senftenbergstr_AOXW01000066_g,m__1506</Iteration_query-def>
|
jpayne@1
|
25170 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
25171 <Iteration_hits>
|
jpayne@1
|
25172 <Hit>
|
jpayne@1
|
25173 <Hit_num>1</Hit_num>
|
jpayne@1
|
25174 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25175 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25176 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25177 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25178 <Hit_hsps>
|
jpayne@1
|
25179 <Hsp>
|
jpayne@1
|
25180 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25181 <Hsp_bit-score>2743.4</Hsp_bit-score>
|
jpayne@1
|
25182 <Hsp_score>1485</Hsp_score>
|
jpayne@1
|
25183 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
25184 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25185 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
25186 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25187 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25188 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25189 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25190 <Hsp_identity>1499</Hsp_identity>
|
jpayne@1
|
25191 <Hsp_positive>1499</Hsp_positive>
|
jpayne@1
|
25192 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25193 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
25194 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25195 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25196 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25197 </Hsp>
|
jpayne@1
|
25198 </Hit_hsps>
|
jpayne@1
|
25199 </Hit>
|
jpayne@1
|
25200 </Iteration_hits>
|
jpayne@1
|
25201 <Iteration_stat>
|
jpayne@1
|
25202 <Statistics>
|
jpayne@1
|
25203 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25204 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25205 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25206 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
25207 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25208 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25209 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25210 </Statistics>
|
jpayne@1
|
25211 </Iteration_stat>
|
jpayne@1
|
25212 </Iteration>
|
jpayne@1
|
25213 <Iteration>
|
jpayne@1
|
25214 <Iteration_iter-num>492</Iteration_iter-num>
|
jpayne@1
|
25215 <Iteration_query-ID>Query_492</Iteration_query-ID>
|
jpayne@1
|
25216 <Iteration_query-def>fliC_g,s,t_Senftenbergstr_AYEJ01000044_g,m__1506</Iteration_query-def>
|
jpayne@1
|
25217 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
25218 <Iteration_hits>
|
jpayne@1
|
25219 <Hit>
|
jpayne@1
|
25220 <Hit_num>1</Hit_num>
|
jpayne@1
|
25221 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25222 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25223 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25224 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25225 <Hit_hsps>
|
jpayne@1
|
25226 <Hsp>
|
jpayne@1
|
25227 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25228 <Hsp_bit-score>2743.4</Hsp_bit-score>
|
jpayne@1
|
25229 <Hsp_score>1485</Hsp_score>
|
jpayne@1
|
25230 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
25231 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25232 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
25233 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25234 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25235 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25236 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25237 <Hsp_identity>1499</Hsp_identity>
|
jpayne@1
|
25238 <Hsp_positive>1499</Hsp_positive>
|
jpayne@1
|
25239 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25240 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
25241 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25242 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25243 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25244 </Hsp>
|
jpayne@1
|
25245 </Hit_hsps>
|
jpayne@1
|
25246 </Hit>
|
jpayne@1
|
25247 </Iteration_hits>
|
jpayne@1
|
25248 <Iteration_stat>
|
jpayne@1
|
25249 <Statistics>
|
jpayne@1
|
25250 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25251 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25252 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25253 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
25254 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25255 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25256 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25257 </Statistics>
|
jpayne@1
|
25258 </Iteration_stat>
|
jpayne@1
|
25259 </Iteration>
|
jpayne@1
|
25260 <Iteration>
|
jpayne@1
|
25261 <Iteration_iter-num>493</Iteration_iter-num>
|
jpayne@1
|
25262 <Iteration_query-ID>Query_493</Iteration_query-ID>
|
jpayne@1
|
25263 <Iteration_query-def>fliC_g,s,t_Senftenbergstr_CAGQ01000036_g,m__1506</Iteration_query-def>
|
jpayne@1
|
25264 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
25265 <Iteration_hits>
|
jpayne@1
|
25266 <Hit>
|
jpayne@1
|
25267 <Hit_num>1</Hit_num>
|
jpayne@1
|
25268 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25269 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25270 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25271 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25272 <Hit_hsps>
|
jpayne@1
|
25273 <Hsp>
|
jpayne@1
|
25274 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25275 <Hsp_bit-score>2743.4</Hsp_bit-score>
|
jpayne@1
|
25276 <Hsp_score>1485</Hsp_score>
|
jpayne@1
|
25277 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
25278 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25279 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
25280 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25281 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25282 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25283 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25284 <Hsp_identity>1499</Hsp_identity>
|
jpayne@1
|
25285 <Hsp_positive>1499</Hsp_positive>
|
jpayne@1
|
25286 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25287 <Hsp_align-len>1506</Hsp_align-len>
|
jpayne@1
|
25288 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATCAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAAGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTGATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25289 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25290 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25291 </Hsp>
|
jpayne@1
|
25292 </Hit_hsps>
|
jpayne@1
|
25293 </Hit>
|
jpayne@1
|
25294 </Iteration_hits>
|
jpayne@1
|
25295 <Iteration_stat>
|
jpayne@1
|
25296 <Statistics>
|
jpayne@1
|
25297 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25298 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25299 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25300 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
25301 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25302 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25303 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25304 </Statistics>
|
jpayne@1
|
25305 </Iteration_stat>
|
jpayne@1
|
25306 </Iteration>
|
jpayne@1
|
25307 <Iteration>
|
jpayne@1
|
25308 <Iteration_iter-num>494</Iteration_iter-num>
|
jpayne@1
|
25309 <Iteration_query-ID>Query_494</Iteration_query-ID>
|
jpayne@1
|
25310 <Iteration_query-def>fliC_z35_Sloterdijkstr_AOXT01000110_other.z35__1476</Iteration_query-def>
|
jpayne@1
|
25311 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
25312 <Iteration_hits>
|
jpayne@1
|
25313 <Hit>
|
jpayne@1
|
25314 <Hit_num>1</Hit_num>
|
jpayne@1
|
25315 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25316 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25317 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25318 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25319 <Hit_hsps>
|
jpayne@1
|
25320 <Hsp>
|
jpayne@1
|
25321 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25322 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
25323 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
25324 <Hsp_evalue>3.00914e-133</Hsp_evalue>
|
jpayne@1
|
25325 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25326 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
25327 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25328 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
25329 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25330 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25331 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
25332 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
25333 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25334 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
25335 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTGCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
25336 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
25337 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
25338 </Hsp>
|
jpayne@1
|
25339 <Hsp>
|
jpayne@1
|
25340 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
25341 <Hsp_bit-score>196.865</Hsp_bit-score>
|
jpayne@1
|
25342 <Hsp_score>106</Hsp_score>
|
jpayne@1
|
25343 <Hsp_evalue>4.35909e-52</Hsp_evalue>
|
jpayne@1
|
25344 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
25345 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
25346 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
25347 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25348 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25349 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25350 <Hsp_identity>198</Hsp_identity>
|
jpayne@1
|
25351 <Hsp_positive>198</Hsp_positive>
|
jpayne@1
|
25352 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25353 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
25354 <Hsp_qseq>AATTGATGCTGCTTTAGCACAGGTTGATGCGCTGCGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25355 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25356 <Hsp_midline>||||||| |||| || || | || || || | |||||| ||||| || | || |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25357 </Hsp>
|
jpayne@1
|
25358 </Hit_hsps>
|
jpayne@1
|
25359 </Hit>
|
jpayne@1
|
25360 </Iteration_hits>
|
jpayne@1
|
25361 <Iteration_stat>
|
jpayne@1
|
25362 <Statistics>
|
jpayne@1
|
25363 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25364 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25365 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25366 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
25367 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25368 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25369 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25370 </Statistics>
|
jpayne@1
|
25371 </Iteration_stat>
|
jpayne@1
|
25372 </Iteration>
|
jpayne@1
|
25373 <Iteration>
|
jpayne@1
|
25374 <Iteration_iter-num>495</Iteration_iter-num>
|
jpayne@1
|
25375 <Iteration_query-ID>Query_495</Iteration_query-ID>
|
jpayne@1
|
25376 <Iteration_query-def>fliC_d_Stanleystr_ARYV01000046_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
25377 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
25378 <Iteration_hits>
|
jpayne@1
|
25379 <Hit>
|
jpayne@1
|
25380 <Hit_num>1</Hit_num>
|
jpayne@1
|
25381 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25382 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25383 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25384 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25385 <Hit_hsps>
|
jpayne@1
|
25386 <Hsp>
|
jpayne@1
|
25387 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25388 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
25389 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
25390 <Hsp_evalue>6.5212e-145</Hsp_evalue>
|
jpayne@1
|
25391 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25392 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
25393 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25394 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
25395 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25396 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25397 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
25398 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
25399 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25400 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
25401 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
25402 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
25403 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
25404 </Hsp>
|
jpayne@1
|
25405 </Hit_hsps>
|
jpayne@1
|
25406 </Hit>
|
jpayne@1
|
25407 </Iteration_hits>
|
jpayne@1
|
25408 <Iteration_stat>
|
jpayne@1
|
25409 <Statistics>
|
jpayne@1
|
25410 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25411 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25412 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25413 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
25414 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25415 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25416 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25417 </Statistics>
|
jpayne@1
|
25418 </Iteration_stat>
|
jpayne@1
|
25419 </Iteration>
|
jpayne@1
|
25420 <Iteration>
|
jpayne@1
|
25421 <Iteration_iter-num>496</Iteration_iter-num>
|
jpayne@1
|
25422 <Iteration_query-ID>Query_496</Iteration_query-ID>
|
jpayne@1
|
25423 <Iteration_query-def>fliC_d_Stanleystr_AOXV01000153_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
25424 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
25425 <Iteration_hits>
|
jpayne@1
|
25426 <Hit>
|
jpayne@1
|
25427 <Hit_num>1</Hit_num>
|
jpayne@1
|
25428 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25429 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25430 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25431 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25432 <Hit_hsps>
|
jpayne@1
|
25433 <Hsp>
|
jpayne@1
|
25434 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25435 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
25436 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
25437 <Hsp_evalue>6.5212e-145</Hsp_evalue>
|
jpayne@1
|
25438 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25439 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
25440 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25441 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
25442 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25443 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25444 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
25445 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
25446 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25447 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
25448 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTTGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
25449 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
25450 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
25451 </Hsp>
|
jpayne@1
|
25452 </Hit_hsps>
|
jpayne@1
|
25453 </Hit>
|
jpayne@1
|
25454 </Iteration_hits>
|
jpayne@1
|
25455 <Iteration_stat>
|
jpayne@1
|
25456 <Statistics>
|
jpayne@1
|
25457 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25458 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25459 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25460 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
25461 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25462 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25463 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25464 </Statistics>
|
jpayne@1
|
25465 </Iteration_stat>
|
jpayne@1
|
25466 </Iteration>
|
jpayne@1
|
25467 <Iteration>
|
jpayne@1
|
25468 <Iteration_iter-num>497</Iteration_iter-num>
|
jpayne@1
|
25469 <Iteration_query-ID>Query_497</Iteration_query-ID>
|
jpayne@1
|
25470 <Iteration_query-def>fliC_z4,z32_Tallahasseestr_AOXS01000084_z4,z23__1257</Iteration_query-def>
|
jpayne@1
|
25471 <Iteration_query-len>1257</Iteration_query-len>
|
jpayne@1
|
25472 <Iteration_hits>
|
jpayne@1
|
25473 <Hit>
|
jpayne@1
|
25474 <Hit_num>1</Hit_num>
|
jpayne@1
|
25475 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25476 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25477 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25478 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25479 <Hit_hsps>
|
jpayne@1
|
25480 <Hsp>
|
jpayne@1
|
25481 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25482 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
25483 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
25484 <Hsp_evalue>2.57531e-128</Hsp_evalue>
|
jpayne@1
|
25485 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25486 <Hsp_query-to>492</Hsp_query-to>
|
jpayne@1
|
25487 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25488 <Hsp_hit-to>1252</Hsp_hit-to>
|
jpayne@1
|
25489 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25490 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25491 <Hsp_identity>409</Hsp_identity>
|
jpayne@1
|
25492 <Hsp_positive>409</Hsp_positive>
|
jpayne@1
|
25493 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25494 <Hsp_align-len>492</Hsp_align-len>
|
jpayne@1
|
25495 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACGTCTAACATTAAAGGTCTGTCTCAGGCTTCCCGTAACGCTAACGACGGTATTTCCATTGCGCAGACGACTGAAGGCGCGTTGAACGAAATCAACAACAACCTGCAGCGTGTGCGCGAACTGTCTGTCCAGGCAGCAAACGGCTCGAACTCTGGTTCCGATCTTAAATCCATCCAGGATGAAATCGATCAGCGCCTGAACGAAATTAACCGTGTCGCGGAACAAACTGATTTTAACGGGAAAAAAGTATTAAGCCAGGATGGACAGCTGACCATTCAGGTTGGGGCGAATGACGGCGAAACTATCACAATCGATCTTCAGAAAATCGAT</Hsp_qseq>
|
jpayne@1
|
25496 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGAT</Hsp_hseq>
|
jpayne@1
|
25497 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| ||||| || ||||||||| |||||||||||||||||||||||||||| ||||| ||||||||||| |||||||| ||| |||| ||||| ||||||||||||||||||||||| || ||||||| ||||| | ||||| | ||||||| ||||||||| ||||| |||||||||||||| | || || ||| | ||||| | || || | | || ||| | |||||||| ||||| | ||||| ||| ||| || |||||||| || || || || ||||| || || |||||||| || ||||| |||</Hsp_midline>
|
jpayne@1
|
25498 </Hsp>
|
jpayne@1
|
25499 </Hit_hsps>
|
jpayne@1
|
25500 </Hit>
|
jpayne@1
|
25501 </Iteration_hits>
|
jpayne@1
|
25502 <Iteration_stat>
|
jpayne@1
|
25503 <Statistics>
|
jpayne@1
|
25504 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25505 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25506 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25507 <Statistics_eff-space>67768344</Statistics_eff-space>
|
jpayne@1
|
25508 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25509 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25510 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25511 </Statistics>
|
jpayne@1
|
25512 </Iteration_stat>
|
jpayne@1
|
25513 </Iteration>
|
jpayne@1
|
25514 <Iteration>
|
jpayne@1
|
25515 <Iteration_iter-num>498</Iteration_iter-num>
|
jpayne@1
|
25516 <Iteration_query-ID>Query_498</Iteration_query-ID>
|
jpayne@1
|
25517 <Iteration_query-def>fliC_k_Thompsonstr_AMSN01000007_k,z__1476</Iteration_query-def>
|
jpayne@1
|
25518 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
25519 <Iteration_hits>
|
jpayne@1
|
25520 <Hit>
|
jpayne@1
|
25521 <Hit_num>1</Hit_num>
|
jpayne@1
|
25522 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25523 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25524 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25525 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25526 <Hit_hsps>
|
jpayne@1
|
25527 <Hsp>
|
jpayne@1
|
25528 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25529 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
25530 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
25531 <Hsp_evalue>2.98793e-138</Hsp_evalue>
|
jpayne@1
|
25532 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25533 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
25534 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25535 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
25536 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25537 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25538 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
25539 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
25540 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25541 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
25542 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
25543 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
25544 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
25545 </Hsp>
|
jpayne@1
|
25546 <Hsp>
|
jpayne@1
|
25547 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
25548 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
25549 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
25550 <Hsp_evalue>4.32836e-57</Hsp_evalue>
|
jpayne@1
|
25551 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
25552 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
25553 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
25554 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25555 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25556 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25557 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
25558 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
25559 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25560 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
25561 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25562 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25563 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25564 </Hsp>
|
jpayne@1
|
25565 </Hit_hsps>
|
jpayne@1
|
25566 </Hit>
|
jpayne@1
|
25567 </Iteration_hits>
|
jpayne@1
|
25568 <Iteration_stat>
|
jpayne@1
|
25569 <Statistics>
|
jpayne@1
|
25570 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25571 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25572 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25573 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
25574 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25575 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25576 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25577 </Statistics>
|
jpayne@1
|
25578 </Iteration_stat>
|
jpayne@1
|
25579 </Iteration>
|
jpayne@1
|
25580 <Iteration>
|
jpayne@1
|
25581 <Iteration_iter-num>499</Iteration_iter-num>
|
jpayne@1
|
25582 <Iteration_query-ID>Query_499</Iteration_query-ID>
|
jpayne@1
|
25583 <Iteration_query-def>fliC_k_Thompsonstr_AOXP01000022_k,z__1476</Iteration_query-def>
|
jpayne@1
|
25584 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
25585 <Iteration_hits>
|
jpayne@1
|
25586 <Hit>
|
jpayne@1
|
25587 <Hit_num>1</Hit_num>
|
jpayne@1
|
25588 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25589 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25590 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25591 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25592 <Hit_hsps>
|
jpayne@1
|
25593 <Hsp>
|
jpayne@1
|
25594 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25595 <Hsp_bit-score>483.096</Hsp_bit-score>
|
jpayne@1
|
25596 <Hsp_score>261</Hsp_score>
|
jpayne@1
|
25597 <Hsp_evalue>2.98793e-138</Hsp_evalue>
|
jpayne@1
|
25598 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25599 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
25600 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25601 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
25602 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25603 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25604 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
25605 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
25606 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25607 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
25608 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
25609 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
25610 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
25611 </Hsp>
|
jpayne@1
|
25612 <Hsp>
|
jpayne@1
|
25613 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
25614 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
25615 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
25616 <Hsp_evalue>4.32836e-57</Hsp_evalue>
|
jpayne@1
|
25617 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
25618 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
25619 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
25620 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25621 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25622 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25623 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
25624 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
25625 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
25626 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
25627 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTGGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25628 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25629 <Hsp_midline>||||||| |||| ||| | | ||||| || | |||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25630 </Hsp>
|
jpayne@1
|
25631 </Hit_hsps>
|
jpayne@1
|
25632 </Hit>
|
jpayne@1
|
25633 </Iteration_hits>
|
jpayne@1
|
25634 <Iteration_stat>
|
jpayne@1
|
25635 <Statistics>
|
jpayne@1
|
25636 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25637 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25638 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25639 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
25640 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25641 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25642 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25643 </Statistics>
|
jpayne@1
|
25644 </Iteration_stat>
|
jpayne@1
|
25645 </Iteration>
|
jpayne@1
|
25646 <Iteration>
|
jpayne@1
|
25647 <Iteration_iter-num>500</Iteration_iter-num>
|
jpayne@1
|
25648 <Iteration_query-ID>Query_500</Iteration_query-ID>
|
jpayne@1
|
25649 <Iteration_query-def>fliC_i_Typhimuriumstr_AUQT01000018_r,i__1476</Iteration_query-def>
|
jpayne@1
|
25650 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
25651 <Iteration_hits>
|
jpayne@1
|
25652 <Hit>
|
jpayne@1
|
25653 <Hit_num>1</Hit_num>
|
jpayne@1
|
25654 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25655 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25656 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25657 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25658 <Hit_hsps>
|
jpayne@1
|
25659 <Hsp>
|
jpayne@1
|
25660 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25661 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
25662 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
25663 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
25664 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25665 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
25666 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25667 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
25668 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25669 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25670 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
25671 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
25672 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25673 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
25674 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
25675 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
25676 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
25677 </Hsp>
|
jpayne@1
|
25678 <Hsp>
|
jpayne@1
|
25679 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
25680 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
25681 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
25682 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
25683 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
25684 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
25685 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
25686 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25687 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25688 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25689 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
25690 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
25691 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25692 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
25693 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25694 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25695 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25696 </Hsp>
|
jpayne@1
|
25697 </Hit_hsps>
|
jpayne@1
|
25698 </Hit>
|
jpayne@1
|
25699 </Iteration_hits>
|
jpayne@1
|
25700 <Iteration_stat>
|
jpayne@1
|
25701 <Statistics>
|
jpayne@1
|
25702 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25703 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25704 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25705 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
25706 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25707 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25708 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25709 </Statistics>
|
jpayne@1
|
25710 </Iteration_stat>
|
jpayne@1
|
25711 </Iteration>
|
jpayne@1
|
25712 <Iteration>
|
jpayne@1
|
25713 <Iteration_iter-num>501</Iteration_iter-num>
|
jpayne@1
|
25714 <Iteration_query-ID>Query_501</Iteration_query-ID>
|
jpayne@1
|
25715 <Iteration_query-def>fliC_i_Typhimuriumstr_AUQU01000015_r,i__1476</Iteration_query-def>
|
jpayne@1
|
25716 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
25717 <Iteration_hits>
|
jpayne@1
|
25718 <Hit>
|
jpayne@1
|
25719 <Hit_num>1</Hit_num>
|
jpayne@1
|
25720 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25721 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25722 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25723 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25724 <Hit_hsps>
|
jpayne@1
|
25725 <Hsp>
|
jpayne@1
|
25726 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25727 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
25728 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
25729 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
25730 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25731 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
25732 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25733 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
25734 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25735 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25736 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
25737 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
25738 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25739 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
25740 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
25741 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
25742 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
25743 </Hsp>
|
jpayne@1
|
25744 <Hsp>
|
jpayne@1
|
25745 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
25746 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
25747 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
25748 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
25749 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
25750 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
25751 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
25752 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25753 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25754 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25755 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
25756 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
25757 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25758 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
25759 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25760 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25761 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25762 </Hsp>
|
jpayne@1
|
25763 </Hit_hsps>
|
jpayne@1
|
25764 </Hit>
|
jpayne@1
|
25765 </Iteration_hits>
|
jpayne@1
|
25766 <Iteration_stat>
|
jpayne@1
|
25767 <Statistics>
|
jpayne@1
|
25768 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25769 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25770 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25771 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
25772 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25773 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25774 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25775 </Statistics>
|
jpayne@1
|
25776 </Iteration_stat>
|
jpayne@1
|
25777 </Iteration>
|
jpayne@1
|
25778 <Iteration>
|
jpayne@1
|
25779 <Iteration_iter-num>502</Iteration_iter-num>
|
jpayne@1
|
25780 <Iteration_query-ID>Query_502</Iteration_query-ID>
|
jpayne@1
|
25781 <Iteration_query-def>fliC_i_Typhimuriumstr_AUQV01000045_r,i__1476</Iteration_query-def>
|
jpayne@1
|
25782 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
25783 <Iteration_hits>
|
jpayne@1
|
25784 <Hit>
|
jpayne@1
|
25785 <Hit_num>1</Hit_num>
|
jpayne@1
|
25786 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25787 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25788 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25789 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25790 <Hit_hsps>
|
jpayne@1
|
25791 <Hsp>
|
jpayne@1
|
25792 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25793 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
25794 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
25795 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
25796 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25797 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
25798 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25799 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
25800 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25801 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25802 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
25803 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
25804 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25805 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
25806 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
25807 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
25808 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
25809 </Hsp>
|
jpayne@1
|
25810 <Hsp>
|
jpayne@1
|
25811 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
25812 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
25813 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
25814 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
25815 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
25816 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
25817 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
25818 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25819 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25820 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25821 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
25822 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
25823 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25824 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
25825 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25826 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25827 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25828 </Hsp>
|
jpayne@1
|
25829 </Hit_hsps>
|
jpayne@1
|
25830 </Hit>
|
jpayne@1
|
25831 </Iteration_hits>
|
jpayne@1
|
25832 <Iteration_stat>
|
jpayne@1
|
25833 <Statistics>
|
jpayne@1
|
25834 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25835 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25836 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25837 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
25838 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25839 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25840 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25841 </Statistics>
|
jpayne@1
|
25842 </Iteration_stat>
|
jpayne@1
|
25843 </Iteration>
|
jpayne@1
|
25844 <Iteration>
|
jpayne@1
|
25845 <Iteration_iter-num>503</Iteration_iter-num>
|
jpayne@1
|
25846 <Iteration_query-ID>Query_503</Iteration_query-ID>
|
jpayne@1
|
25847 <Iteration_query-def>fliC_i_Typhimuriumstr_AOXC01000029_r,i__1476</Iteration_query-def>
|
jpayne@1
|
25848 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
25849 <Iteration_hits>
|
jpayne@1
|
25850 <Hit>
|
jpayne@1
|
25851 <Hit_num>1</Hit_num>
|
jpayne@1
|
25852 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25853 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25854 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25855 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25856 <Hit_hsps>
|
jpayne@1
|
25857 <Hsp>
|
jpayne@1
|
25858 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25859 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
25860 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
25861 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
25862 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25863 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
25864 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25865 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
25866 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25867 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25868 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
25869 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
25870 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25871 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
25872 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
25873 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
25874 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
25875 </Hsp>
|
jpayne@1
|
25876 <Hsp>
|
jpayne@1
|
25877 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
25878 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
25879 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
25880 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
25881 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
25882 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
25883 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
25884 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25885 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25886 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25887 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
25888 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
25889 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25890 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
25891 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25892 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25893 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25894 </Hsp>
|
jpayne@1
|
25895 </Hit_hsps>
|
jpayne@1
|
25896 </Hit>
|
jpayne@1
|
25897 </Iteration_hits>
|
jpayne@1
|
25898 <Iteration_stat>
|
jpayne@1
|
25899 <Statistics>
|
jpayne@1
|
25900 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25901 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25902 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25903 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
25904 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25905 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25906 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25907 </Statistics>
|
jpayne@1
|
25908 </Iteration_stat>
|
jpayne@1
|
25909 </Iteration>
|
jpayne@1
|
25910 <Iteration>
|
jpayne@1
|
25911 <Iteration_iter-num>504</Iteration_iter-num>
|
jpayne@1
|
25912 <Iteration_query-ID>Query_504</Iteration_query-ID>
|
jpayne@1
|
25913 <Iteration_query-def>fliC_i_Typhimuriumstr_AHUV01000013_r,i__1476</Iteration_query-def>
|
jpayne@1
|
25914 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
25915 <Iteration_hits>
|
jpayne@1
|
25916 <Hit>
|
jpayne@1
|
25917 <Hit_num>1</Hit_num>
|
jpayne@1
|
25918 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25919 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25920 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25921 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25922 <Hit_hsps>
|
jpayne@1
|
25923 <Hsp>
|
jpayne@1
|
25924 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25925 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
25926 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
25927 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
25928 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25929 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
25930 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25931 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
25932 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25933 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25934 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
25935 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
25936 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25937 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
25938 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
25939 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
25940 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
25941 </Hsp>
|
jpayne@1
|
25942 <Hsp>
|
jpayne@1
|
25943 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
25944 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
25945 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
25946 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
25947 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
25948 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
25949 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
25950 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
25951 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25952 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
25953 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
25954 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
25955 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
25956 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
25957 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
25958 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
25959 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
25960 </Hsp>
|
jpayne@1
|
25961 </Hit_hsps>
|
jpayne@1
|
25962 </Hit>
|
jpayne@1
|
25963 </Iteration_hits>
|
jpayne@1
|
25964 <Iteration_stat>
|
jpayne@1
|
25965 <Statistics>
|
jpayne@1
|
25966 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
25967 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
25968 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
25969 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
25970 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
25971 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
25972 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
25973 </Statistics>
|
jpayne@1
|
25974 </Iteration_stat>
|
jpayne@1
|
25975 </Iteration>
|
jpayne@1
|
25976 <Iteration>
|
jpayne@1
|
25977 <Iteration_iter-num>505</Iteration_iter-num>
|
jpayne@1
|
25978 <Iteration_query-ID>Query_505</Iteration_query-ID>
|
jpayne@1
|
25979 <Iteration_query-def>fliC_i_Typhimuriumstr_AUQM01000007_r,i__1476</Iteration_query-def>
|
jpayne@1
|
25980 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
25981 <Iteration_hits>
|
jpayne@1
|
25982 <Hit>
|
jpayne@1
|
25983 <Hit_num>1</Hit_num>
|
jpayne@1
|
25984 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
25985 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
25986 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
25987 <Hit_len>1962</Hit_len>
|
jpayne@1
|
25988 <Hit_hsps>
|
jpayne@1
|
25989 <Hsp>
|
jpayne@1
|
25990 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
25991 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
25992 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
25993 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
25994 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
25995 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
25996 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
25997 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
25998 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
25999 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26000 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26001 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26002 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26003 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26004 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26005 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26006 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26007 </Hsp>
|
jpayne@1
|
26008 <Hsp>
|
jpayne@1
|
26009 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26010 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26011 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26012 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26013 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26014 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26015 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26016 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26017 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26018 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26019 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26020 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26021 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26022 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26023 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26024 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26025 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26026 </Hsp>
|
jpayne@1
|
26027 </Hit_hsps>
|
jpayne@1
|
26028 </Hit>
|
jpayne@1
|
26029 </Iteration_hits>
|
jpayne@1
|
26030 <Iteration_stat>
|
jpayne@1
|
26031 <Statistics>
|
jpayne@1
|
26032 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26033 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26034 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26035 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26036 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26037 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26038 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26039 </Statistics>
|
jpayne@1
|
26040 </Iteration_stat>
|
jpayne@1
|
26041 </Iteration>
|
jpayne@1
|
26042 <Iteration>
|
jpayne@1
|
26043 <Iteration_iter-num>506</Iteration_iter-num>
|
jpayne@1
|
26044 <Iteration_query-ID>Query_506</Iteration_query-ID>
|
jpayne@1
|
26045 <Iteration_query-def>fliC_i_Typhimuriumstr_AUQO01000013_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26046 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26047 <Iteration_hits>
|
jpayne@1
|
26048 <Hit>
|
jpayne@1
|
26049 <Hit_num>1</Hit_num>
|
jpayne@1
|
26050 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26051 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26052 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26053 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26054 <Hit_hsps>
|
jpayne@1
|
26055 <Hsp>
|
jpayne@1
|
26056 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26057 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26058 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26059 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26060 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26061 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26062 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26063 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26064 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26065 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26066 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26067 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26068 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26069 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26070 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26071 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26072 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26073 </Hsp>
|
jpayne@1
|
26074 <Hsp>
|
jpayne@1
|
26075 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26076 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26077 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26078 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26079 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26080 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26081 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26082 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26083 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26084 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26085 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26086 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26087 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26088 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26089 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26090 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26091 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26092 </Hsp>
|
jpayne@1
|
26093 </Hit_hsps>
|
jpayne@1
|
26094 </Hit>
|
jpayne@1
|
26095 </Iteration_hits>
|
jpayne@1
|
26096 <Iteration_stat>
|
jpayne@1
|
26097 <Statistics>
|
jpayne@1
|
26098 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26099 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26100 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26101 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26102 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26103 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26104 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26105 </Statistics>
|
jpayne@1
|
26106 </Iteration_stat>
|
jpayne@1
|
26107 </Iteration>
|
jpayne@1
|
26108 <Iteration>
|
jpayne@1
|
26109 <Iteration_iter-num>507</Iteration_iter-num>
|
jpayne@1
|
26110 <Iteration_query-ID>Query_507</Iteration_query-ID>
|
jpayne@1
|
26111 <Iteration_query-def>fliC_i_Typhimuriumstr_AUQN01000009_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26112 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26113 <Iteration_hits>
|
jpayne@1
|
26114 <Hit>
|
jpayne@1
|
26115 <Hit_num>1</Hit_num>
|
jpayne@1
|
26116 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26117 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26118 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26119 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26120 <Hit_hsps>
|
jpayne@1
|
26121 <Hsp>
|
jpayne@1
|
26122 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26123 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26124 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26125 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26126 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26127 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26128 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26129 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26130 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26131 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26132 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26133 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26134 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26135 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26136 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26137 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26138 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26139 </Hsp>
|
jpayne@1
|
26140 <Hsp>
|
jpayne@1
|
26141 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26142 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26143 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26144 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26145 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26146 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26147 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26148 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26149 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26150 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26151 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26152 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26153 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26154 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26155 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26156 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26157 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26158 </Hsp>
|
jpayne@1
|
26159 </Hit_hsps>
|
jpayne@1
|
26160 </Hit>
|
jpayne@1
|
26161 </Iteration_hits>
|
jpayne@1
|
26162 <Iteration_stat>
|
jpayne@1
|
26163 <Statistics>
|
jpayne@1
|
26164 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26165 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26166 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26167 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26168 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26169 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26170 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26171 </Statistics>
|
jpayne@1
|
26172 </Iteration_stat>
|
jpayne@1
|
26173 </Iteration>
|
jpayne@1
|
26174 <Iteration>
|
jpayne@1
|
26175 <Iteration_iter-num>508</Iteration_iter-num>
|
jpayne@1
|
26176 <Iteration_query-ID>Query_508</Iteration_query-ID>
|
jpayne@1
|
26177 <Iteration_query-def>fliC_i_Typhimuriumstr_AUQL01000008_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26178 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26179 <Iteration_hits>
|
jpayne@1
|
26180 <Hit>
|
jpayne@1
|
26181 <Hit_num>1</Hit_num>
|
jpayne@1
|
26182 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26183 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26184 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26185 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26186 <Hit_hsps>
|
jpayne@1
|
26187 <Hsp>
|
jpayne@1
|
26188 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26189 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26190 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26191 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26192 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26193 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26194 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26195 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26196 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26197 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26198 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26199 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26200 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26201 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26202 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26203 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26204 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26205 </Hsp>
|
jpayne@1
|
26206 <Hsp>
|
jpayne@1
|
26207 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26208 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26209 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26210 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26211 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26212 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26213 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26214 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26215 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26216 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26217 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26218 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26219 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26220 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26221 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26222 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26223 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26224 </Hsp>
|
jpayne@1
|
26225 </Hit_hsps>
|
jpayne@1
|
26226 </Hit>
|
jpayne@1
|
26227 </Iteration_hits>
|
jpayne@1
|
26228 <Iteration_stat>
|
jpayne@1
|
26229 <Statistics>
|
jpayne@1
|
26230 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26231 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26232 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26233 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26234 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26235 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26236 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26237 </Statistics>
|
jpayne@1
|
26238 </Iteration_stat>
|
jpayne@1
|
26239 </Iteration>
|
jpayne@1
|
26240 <Iteration>
|
jpayne@1
|
26241 <Iteration_iter-num>509</Iteration_iter-num>
|
jpayne@1
|
26242 <Iteration_query-ID>Query_509</Iteration_query-ID>
|
jpayne@1
|
26243 <Iteration_query-def>fliC_i_Typhimuriumstr_AHVA01000002_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26244 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26245 <Iteration_hits>
|
jpayne@1
|
26246 <Hit>
|
jpayne@1
|
26247 <Hit_num>1</Hit_num>
|
jpayne@1
|
26248 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26249 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26250 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26251 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26252 <Hit_hsps>
|
jpayne@1
|
26253 <Hsp>
|
jpayne@1
|
26254 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26255 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26256 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26257 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26258 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26259 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26260 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26261 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26262 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26263 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26264 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26265 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26266 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26267 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26268 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26269 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26270 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26271 </Hsp>
|
jpayne@1
|
26272 <Hsp>
|
jpayne@1
|
26273 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26274 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26275 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26276 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26277 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26278 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26279 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26280 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26281 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26282 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26283 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26284 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26285 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26286 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26287 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26288 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26289 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26290 </Hsp>
|
jpayne@1
|
26291 </Hit_hsps>
|
jpayne@1
|
26292 </Hit>
|
jpayne@1
|
26293 </Iteration_hits>
|
jpayne@1
|
26294 <Iteration_stat>
|
jpayne@1
|
26295 <Statistics>
|
jpayne@1
|
26296 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26297 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26298 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26299 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26300 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26301 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26302 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26303 </Statistics>
|
jpayne@1
|
26304 </Iteration_stat>
|
jpayne@1
|
26305 </Iteration>
|
jpayne@1
|
26306 <Iteration>
|
jpayne@1
|
26307 <Iteration_iter-num>510</Iteration_iter-num>
|
jpayne@1
|
26308 <Iteration_query-ID>Query_510</Iteration_query-ID>
|
jpayne@1
|
26309 <Iteration_query-def>fliC_i_Typhimuriumstr_AHUZ01000001_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26310 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26311 <Iteration_hits>
|
jpayne@1
|
26312 <Hit>
|
jpayne@1
|
26313 <Hit_num>1</Hit_num>
|
jpayne@1
|
26314 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26315 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26316 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26317 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26318 <Hit_hsps>
|
jpayne@1
|
26319 <Hsp>
|
jpayne@1
|
26320 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26321 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26322 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26323 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26324 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26325 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26326 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26327 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26328 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26329 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26330 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26331 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26332 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26333 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26334 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26335 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26336 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26337 </Hsp>
|
jpayne@1
|
26338 <Hsp>
|
jpayne@1
|
26339 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26340 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26341 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26342 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26343 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26344 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26345 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26346 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26347 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26348 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26349 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26350 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26351 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26352 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26353 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26354 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26355 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26356 </Hsp>
|
jpayne@1
|
26357 </Hit_hsps>
|
jpayne@1
|
26358 </Hit>
|
jpayne@1
|
26359 </Iteration_hits>
|
jpayne@1
|
26360 <Iteration_stat>
|
jpayne@1
|
26361 <Statistics>
|
jpayne@1
|
26362 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26363 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26364 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26365 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26366 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26367 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26368 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26369 </Statistics>
|
jpayne@1
|
26370 </Iteration_stat>
|
jpayne@1
|
26371 </Iteration>
|
jpayne@1
|
26372 <Iteration>
|
jpayne@1
|
26373 <Iteration_iter-num>511</Iteration_iter-num>
|
jpayne@1
|
26374 <Iteration_query-ID>Query_511</Iteration_query-ID>
|
jpayne@1
|
26375 <Iteration_query-def>fliC_i_Typhimuriumstr_AOXO01000030_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26376 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26377 <Iteration_hits>
|
jpayne@1
|
26378 <Hit>
|
jpayne@1
|
26379 <Hit_num>1</Hit_num>
|
jpayne@1
|
26380 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26381 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26382 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26383 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26384 <Hit_hsps>
|
jpayne@1
|
26385 <Hsp>
|
jpayne@1
|
26386 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26387 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26388 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26389 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26390 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26391 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26392 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26393 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26394 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26395 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26396 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26397 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26398 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26399 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26400 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26401 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26402 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26403 </Hsp>
|
jpayne@1
|
26404 <Hsp>
|
jpayne@1
|
26405 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26406 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26407 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26408 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26409 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26410 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26411 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26412 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26413 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26414 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26415 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26416 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26417 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26418 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26419 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26420 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26421 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26422 </Hsp>
|
jpayne@1
|
26423 </Hit_hsps>
|
jpayne@1
|
26424 </Hit>
|
jpayne@1
|
26425 </Iteration_hits>
|
jpayne@1
|
26426 <Iteration_stat>
|
jpayne@1
|
26427 <Statistics>
|
jpayne@1
|
26428 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26429 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26430 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26431 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26432 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26433 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26434 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26435 </Statistics>
|
jpayne@1
|
26436 </Iteration_stat>
|
jpayne@1
|
26437 </Iteration>
|
jpayne@1
|
26438 <Iteration>
|
jpayne@1
|
26439 <Iteration_iter-num>512</Iteration_iter-num>
|
jpayne@1
|
26440 <Iteration_query-ID>Query_512</Iteration_query-ID>
|
jpayne@1
|
26441 <Iteration_query-def>fliC_i_Typhimuriumstr_AJTU01000002_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26442 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26443 <Iteration_hits>
|
jpayne@1
|
26444 <Hit>
|
jpayne@1
|
26445 <Hit_num>1</Hit_num>
|
jpayne@1
|
26446 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26447 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26448 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26449 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26450 <Hit_hsps>
|
jpayne@1
|
26451 <Hsp>
|
jpayne@1
|
26452 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26453 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26454 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26455 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26456 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26457 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26458 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26459 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26460 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26461 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26462 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26463 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26464 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26465 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26466 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26467 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26468 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26469 </Hsp>
|
jpayne@1
|
26470 <Hsp>
|
jpayne@1
|
26471 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26472 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26473 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26474 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26475 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26476 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26477 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26478 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26479 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26480 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26481 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26482 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26483 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26484 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26485 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26486 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26487 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26488 </Hsp>
|
jpayne@1
|
26489 </Hit_hsps>
|
jpayne@1
|
26490 </Hit>
|
jpayne@1
|
26491 </Iteration_hits>
|
jpayne@1
|
26492 <Iteration_stat>
|
jpayne@1
|
26493 <Statistics>
|
jpayne@1
|
26494 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26495 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26496 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26497 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26498 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26499 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26500 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26501 </Statistics>
|
jpayne@1
|
26502 </Iteration_stat>
|
jpayne@1
|
26503 </Iteration>
|
jpayne@1
|
26504 <Iteration>
|
jpayne@1
|
26505 <Iteration_iter-num>513</Iteration_iter-num>
|
jpayne@1
|
26506 <Iteration_query-ID>Query_513</Iteration_query-ID>
|
jpayne@1
|
26507 <Iteration_query-def>fliC_i_Typhimuriumstr_AOXD01000106_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26508 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26509 <Iteration_hits>
|
jpayne@1
|
26510 <Hit>
|
jpayne@1
|
26511 <Hit_num>1</Hit_num>
|
jpayne@1
|
26512 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26513 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26514 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26515 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26516 <Hit_hsps>
|
jpayne@1
|
26517 <Hsp>
|
jpayne@1
|
26518 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26519 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26520 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26521 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26522 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26523 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26524 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26525 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26526 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26527 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26528 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26529 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26530 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26531 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26532 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26533 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26534 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26535 </Hsp>
|
jpayne@1
|
26536 <Hsp>
|
jpayne@1
|
26537 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26538 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26539 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26540 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26541 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26542 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26543 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26544 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26545 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26546 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26547 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26548 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26549 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26550 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26551 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26552 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26553 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26554 </Hsp>
|
jpayne@1
|
26555 </Hit_hsps>
|
jpayne@1
|
26556 </Hit>
|
jpayne@1
|
26557 </Iteration_hits>
|
jpayne@1
|
26558 <Iteration_stat>
|
jpayne@1
|
26559 <Statistics>
|
jpayne@1
|
26560 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26561 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26562 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26563 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26564 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26565 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26566 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26567 </Statistics>
|
jpayne@1
|
26568 </Iteration_stat>
|
jpayne@1
|
26569 </Iteration>
|
jpayne@1
|
26570 <Iteration>
|
jpayne@1
|
26571 <Iteration_iter-num>514</Iteration_iter-num>
|
jpayne@1
|
26572 <Iteration_query-ID>Query_514</Iteration_query-ID>
|
jpayne@1
|
26573 <Iteration_query-def>fliC_i_Typhimuriumstr_AMEE02000072_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26574 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26575 <Iteration_hits>
|
jpayne@1
|
26576 <Hit>
|
jpayne@1
|
26577 <Hit_num>1</Hit_num>
|
jpayne@1
|
26578 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26579 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26580 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26581 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26582 <Hit_hsps>
|
jpayne@1
|
26583 <Hsp>
|
jpayne@1
|
26584 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26585 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26586 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26587 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26588 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26589 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26590 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26591 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26592 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26593 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26594 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26595 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26596 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26597 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26598 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26599 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26600 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26601 </Hsp>
|
jpayne@1
|
26602 <Hsp>
|
jpayne@1
|
26603 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26604 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26605 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26606 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26607 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26608 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26609 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26610 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26611 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26612 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26613 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26614 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26615 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26616 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26617 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26618 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26619 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26620 </Hsp>
|
jpayne@1
|
26621 </Hit_hsps>
|
jpayne@1
|
26622 </Hit>
|
jpayne@1
|
26623 </Iteration_hits>
|
jpayne@1
|
26624 <Iteration_stat>
|
jpayne@1
|
26625 <Statistics>
|
jpayne@1
|
26626 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26627 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26628 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26629 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26630 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26631 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26632 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26633 </Statistics>
|
jpayne@1
|
26634 </Iteration_stat>
|
jpayne@1
|
26635 </Iteration>
|
jpayne@1
|
26636 <Iteration>
|
jpayne@1
|
26637 <Iteration_iter-num>515</Iteration_iter-num>
|
jpayne@1
|
26638 <Iteration_query-ID>Query_515</Iteration_query-ID>
|
jpayne@1
|
26639 <Iteration_query-def>fliC_i_Typhimuriumstr_ATWR01000101_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26640 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26641 <Iteration_hits>
|
jpayne@1
|
26642 <Hit>
|
jpayne@1
|
26643 <Hit_num>1</Hit_num>
|
jpayne@1
|
26644 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26645 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26646 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26647 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26648 <Hit_hsps>
|
jpayne@1
|
26649 <Hsp>
|
jpayne@1
|
26650 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26651 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26652 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26653 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26654 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26655 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26656 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26657 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26658 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26659 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26660 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26661 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26662 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26663 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26664 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26665 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26666 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26667 </Hsp>
|
jpayne@1
|
26668 <Hsp>
|
jpayne@1
|
26669 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26670 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26671 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26672 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26673 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26674 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26675 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26676 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26677 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26678 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26679 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26680 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26681 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26682 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26683 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26684 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26685 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26686 </Hsp>
|
jpayne@1
|
26687 </Hit_hsps>
|
jpayne@1
|
26688 </Hit>
|
jpayne@1
|
26689 </Iteration_hits>
|
jpayne@1
|
26690 <Iteration_stat>
|
jpayne@1
|
26691 <Statistics>
|
jpayne@1
|
26692 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26693 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26694 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26695 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26696 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26697 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26698 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26699 </Statistics>
|
jpayne@1
|
26700 </Iteration_stat>
|
jpayne@1
|
26701 </Iteration>
|
jpayne@1
|
26702 <Iteration>
|
jpayne@1
|
26703 <Iteration_iter-num>516</Iteration_iter-num>
|
jpayne@1
|
26704 <Iteration_query-ID>Query_516</Iteration_query-ID>
|
jpayne@1
|
26705 <Iteration_query-def>fliC_i_Typhimuriumstr_AMDZ02000002_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26706 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26707 <Iteration_hits>
|
jpayne@1
|
26708 <Hit>
|
jpayne@1
|
26709 <Hit_num>1</Hit_num>
|
jpayne@1
|
26710 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26711 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26712 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26713 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26714 <Hit_hsps>
|
jpayne@1
|
26715 <Hsp>
|
jpayne@1
|
26716 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26717 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26718 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26719 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26720 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26721 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26722 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26723 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26724 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26725 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26726 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26727 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26728 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26729 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26730 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26731 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26732 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26733 </Hsp>
|
jpayne@1
|
26734 <Hsp>
|
jpayne@1
|
26735 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26736 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26737 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26738 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26739 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26740 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26741 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26742 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26743 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26744 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26745 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26746 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26747 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26748 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26749 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26750 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26751 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26752 </Hsp>
|
jpayne@1
|
26753 </Hit_hsps>
|
jpayne@1
|
26754 </Hit>
|
jpayne@1
|
26755 </Iteration_hits>
|
jpayne@1
|
26756 <Iteration_stat>
|
jpayne@1
|
26757 <Statistics>
|
jpayne@1
|
26758 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26759 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26760 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26761 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26762 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26763 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26764 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26765 </Statistics>
|
jpayne@1
|
26766 </Iteration_stat>
|
jpayne@1
|
26767 </Iteration>
|
jpayne@1
|
26768 <Iteration>
|
jpayne@1
|
26769 <Iteration_iter-num>517</Iteration_iter-num>
|
jpayne@1
|
26770 <Iteration_query-ID>Query_517</Iteration_query-ID>
|
jpayne@1
|
26771 <Iteration_query-def>fliC_i_Typhimuriumstr_AMEA02000017_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26772 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26773 <Iteration_hits>
|
jpayne@1
|
26774 <Hit>
|
jpayne@1
|
26775 <Hit_num>1</Hit_num>
|
jpayne@1
|
26776 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26777 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26778 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26779 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26780 <Hit_hsps>
|
jpayne@1
|
26781 <Hsp>
|
jpayne@1
|
26782 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26783 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26784 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26785 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26786 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26787 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26788 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26789 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26790 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26791 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26792 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26793 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26794 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26795 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26796 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26797 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26798 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26799 </Hsp>
|
jpayne@1
|
26800 <Hsp>
|
jpayne@1
|
26801 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26802 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26803 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26804 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26805 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26806 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26807 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26808 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26809 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26810 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26811 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26812 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26813 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26814 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26815 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26816 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26817 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26818 </Hsp>
|
jpayne@1
|
26819 </Hit_hsps>
|
jpayne@1
|
26820 </Hit>
|
jpayne@1
|
26821 </Iteration_hits>
|
jpayne@1
|
26822 <Iteration_stat>
|
jpayne@1
|
26823 <Statistics>
|
jpayne@1
|
26824 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26825 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26826 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26827 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26828 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26829 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26830 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26831 </Statistics>
|
jpayne@1
|
26832 </Iteration_stat>
|
jpayne@1
|
26833 </Iteration>
|
jpayne@1
|
26834 <Iteration>
|
jpayne@1
|
26835 <Iteration_iter-num>518</Iteration_iter-num>
|
jpayne@1
|
26836 <Iteration_query-ID>Query_518</Iteration_query-ID>
|
jpayne@1
|
26837 <Iteration_query-def>fliC_i_Typhimuriumstr_AERV01000014_r,i__1476</Iteration_query-def>
|
jpayne@1
|
26838 <Iteration_query-len>1476</Iteration_query-len>
|
jpayne@1
|
26839 <Iteration_hits>
|
jpayne@1
|
26840 <Hit>
|
jpayne@1
|
26841 <Hit_num>1</Hit_num>
|
jpayne@1
|
26842 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26843 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26844 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26845 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26846 <Hit_hsps>
|
jpayne@1
|
26847 <Hsp>
|
jpayne@1
|
26848 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26849 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
26850 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
26851 <Hsp_evalue>6.46773e-135</Hsp_evalue>
|
jpayne@1
|
26852 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26853 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
26854 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26855 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
26856 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26857 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26858 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
26859 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
26860 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26861 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
26862 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
26863 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
26864 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
26865 </Hsp>
|
jpayne@1
|
26866 <Hsp>
|
jpayne@1
|
26867 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26868 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
26869 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
26870 <Hsp_evalue>9.3032e-59</Hsp_evalue>
|
jpayne@1
|
26871 <Hsp_query-from>1233</Hsp_query-from>
|
jpayne@1
|
26872 <Hsp_query-to>1476</Hsp_query-to>
|
jpayne@1
|
26873 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26874 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26875 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26876 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26877 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
26878 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
26879 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26880 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
26881 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26882 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26883 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26884 </Hsp>
|
jpayne@1
|
26885 </Hit_hsps>
|
jpayne@1
|
26886 </Hit>
|
jpayne@1
|
26887 </Iteration_hits>
|
jpayne@1
|
26888 <Iteration_stat>
|
jpayne@1
|
26889 <Statistics>
|
jpayne@1
|
26890 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26891 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26892 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26893 <Statistics_eff-space>79746768</Statistics_eff-space>
|
jpayne@1
|
26894 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26895 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26896 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26897 </Statistics>
|
jpayne@1
|
26898 </Iteration_stat>
|
jpayne@1
|
26899 </Iteration>
|
jpayne@1
|
26900 <Iteration>
|
jpayne@1
|
26901 <Iteration_iter-num>519</Iteration_iter-num>
|
jpayne@1
|
26902 <Iteration_query-ID>Query_519</Iteration_query-ID>
|
jpayne@1
|
26903 <Iteration_query-def>fliC_d_Typhistr_AJGK01000049_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
26904 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
26905 <Iteration_hits>
|
jpayne@1
|
26906 <Hit>
|
jpayne@1
|
26907 <Hit_num>1</Hit_num>
|
jpayne@1
|
26908 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26909 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26910 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26911 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26912 <Hit_hsps>
|
jpayne@1
|
26913 <Hsp>
|
jpayne@1
|
26914 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26915 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
26916 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
26917 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
26918 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26919 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
26920 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26921 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
26922 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26923 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26924 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
26925 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
26926 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26927 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
26928 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
26929 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
26930 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
26931 </Hsp>
|
jpayne@1
|
26932 <Hsp>
|
jpayne@1
|
26933 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
26934 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
26935 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
26936 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
26937 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
26938 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
26939 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
26940 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
26941 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26942 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26943 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
26944 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
26945 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
26946 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
26947 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
26948 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
26949 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
26950 </Hsp>
|
jpayne@1
|
26951 </Hit_hsps>
|
jpayne@1
|
26952 </Hit>
|
jpayne@1
|
26953 </Iteration_hits>
|
jpayne@1
|
26954 <Iteration_stat>
|
jpayne@1
|
26955 <Statistics>
|
jpayne@1
|
26956 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
26957 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
26958 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
26959 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
26960 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
26961 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
26962 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
26963 </Statistics>
|
jpayne@1
|
26964 </Iteration_stat>
|
jpayne@1
|
26965 </Iteration>
|
jpayne@1
|
26966 <Iteration>
|
jpayne@1
|
26967 <Iteration_iter-num>520</Iteration_iter-num>
|
jpayne@1
|
26968 <Iteration_query-ID>Query_520</Iteration_query-ID>
|
jpayne@1
|
26969 <Iteration_query-def>fliC_d_Typhistr_AKZO01000023_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
26970 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
26971 <Iteration_hits>
|
jpayne@1
|
26972 <Hit>
|
jpayne@1
|
26973 <Hit_num>1</Hit_num>
|
jpayne@1
|
26974 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
26975 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
26976 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
26977 <Hit_len>1962</Hit_len>
|
jpayne@1
|
26978 <Hit_hsps>
|
jpayne@1
|
26979 <Hsp>
|
jpayne@1
|
26980 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
26981 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
26982 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
26983 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
26984 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
26985 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
26986 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
26987 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
26988 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
26989 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
26990 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
26991 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
26992 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
26993 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
26994 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
26995 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
26996 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
26997 </Hsp>
|
jpayne@1
|
26998 <Hsp>
|
jpayne@1
|
26999 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27000 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27001 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27002 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27003 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27004 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27005 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27006 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27007 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27008 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27009 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27010 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27011 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27012 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27013 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27014 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27015 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27016 </Hsp>
|
jpayne@1
|
27017 </Hit_hsps>
|
jpayne@1
|
27018 </Hit>
|
jpayne@1
|
27019 </Iteration_hits>
|
jpayne@1
|
27020 <Iteration_stat>
|
jpayne@1
|
27021 <Statistics>
|
jpayne@1
|
27022 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27023 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27024 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27025 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27026 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27027 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27028 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27029 </Statistics>
|
jpayne@1
|
27030 </Iteration_stat>
|
jpayne@1
|
27031 </Iteration>
|
jpayne@1
|
27032 <Iteration>
|
jpayne@1
|
27033 <Iteration_iter-num>521</Iteration_iter-num>
|
jpayne@1
|
27034 <Iteration_query-ID>Query_521</Iteration_query-ID>
|
jpayne@1
|
27035 <Iteration_query-def>fliC_d_Typhistr_AKIC01000186_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
27036 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
27037 <Iteration_hits>
|
jpayne@1
|
27038 <Hit>
|
jpayne@1
|
27039 <Hit_num>1</Hit_num>
|
jpayne@1
|
27040 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27041 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27042 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27043 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27044 <Hit_hsps>
|
jpayne@1
|
27045 <Hsp>
|
jpayne@1
|
27046 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27047 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
27048 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
27049 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
27050 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27051 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
27052 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27053 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
27054 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27055 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27056 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
27057 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
27058 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27059 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
27060 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
27061 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
27062 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
27063 </Hsp>
|
jpayne@1
|
27064 <Hsp>
|
jpayne@1
|
27065 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27066 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27067 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27068 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27069 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27070 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27071 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27072 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27073 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27074 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27075 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27076 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27077 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27078 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27079 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27080 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27081 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27082 </Hsp>
|
jpayne@1
|
27083 </Hit_hsps>
|
jpayne@1
|
27084 </Hit>
|
jpayne@1
|
27085 </Iteration_hits>
|
jpayne@1
|
27086 <Iteration_stat>
|
jpayne@1
|
27087 <Statistics>
|
jpayne@1
|
27088 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27089 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27090 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27091 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27092 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27093 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27094 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27095 </Statistics>
|
jpayne@1
|
27096 </Iteration_stat>
|
jpayne@1
|
27097 </Iteration>
|
jpayne@1
|
27098 <Iteration>
|
jpayne@1
|
27099 <Iteration_iter-num>522</Iteration_iter-num>
|
jpayne@1
|
27100 <Iteration_query-ID>Query_522</Iteration_query-ID>
|
jpayne@1
|
27101 <Iteration_query-def>fliC_d_Typhistr_CAAR01000280_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
27102 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
27103 <Iteration_hits>
|
jpayne@1
|
27104 <Hit>
|
jpayne@1
|
27105 <Hit_num>1</Hit_num>
|
jpayne@1
|
27106 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27107 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27108 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27109 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27110 <Hit_hsps>
|
jpayne@1
|
27111 <Hsp>
|
jpayne@1
|
27112 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27113 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
27114 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
27115 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
27116 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27117 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
27118 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27119 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
27120 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27121 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27122 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
27123 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
27124 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27125 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
27126 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
27127 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
27128 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
27129 </Hsp>
|
jpayne@1
|
27130 <Hsp>
|
jpayne@1
|
27131 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27132 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27133 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27134 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27135 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27136 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27137 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27138 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27139 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27140 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27141 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27142 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27143 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27144 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27145 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27146 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27147 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27148 </Hsp>
|
jpayne@1
|
27149 </Hit_hsps>
|
jpayne@1
|
27150 </Hit>
|
jpayne@1
|
27151 </Iteration_hits>
|
jpayne@1
|
27152 <Iteration_stat>
|
jpayne@1
|
27153 <Statistics>
|
jpayne@1
|
27154 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27155 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27156 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27157 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27158 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27159 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27160 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27161 </Statistics>
|
jpayne@1
|
27162 </Iteration_stat>
|
jpayne@1
|
27163 </Iteration>
|
jpayne@1
|
27164 <Iteration>
|
jpayne@1
|
27165 <Iteration_iter-num>523</Iteration_iter-num>
|
jpayne@1
|
27166 <Iteration_query-ID>Query_523</Iteration_query-ID>
|
jpayne@1
|
27167 <Iteration_query-def>fliC_d_Typhistr_CAAT01000104_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
27168 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
27169 <Iteration_hits>
|
jpayne@1
|
27170 <Hit>
|
jpayne@1
|
27171 <Hit_num>1</Hit_num>
|
jpayne@1
|
27172 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27173 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27174 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27175 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27176 <Hit_hsps>
|
jpayne@1
|
27177 <Hsp>
|
jpayne@1
|
27178 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27179 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
27180 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
27181 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
27182 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27183 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
27184 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27185 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
27186 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27187 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27188 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
27189 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
27190 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27191 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
27192 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
27193 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
27194 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
27195 </Hsp>
|
jpayne@1
|
27196 <Hsp>
|
jpayne@1
|
27197 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27198 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27199 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27200 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27201 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27202 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27203 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27204 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27205 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27206 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27207 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27208 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27209 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27210 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27211 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27212 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27213 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27214 </Hsp>
|
jpayne@1
|
27215 </Hit_hsps>
|
jpayne@1
|
27216 </Hit>
|
jpayne@1
|
27217 </Iteration_hits>
|
jpayne@1
|
27218 <Iteration_stat>
|
jpayne@1
|
27219 <Statistics>
|
jpayne@1
|
27220 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27221 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27222 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27223 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27224 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27225 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27226 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27227 </Statistics>
|
jpayne@1
|
27228 </Iteration_stat>
|
jpayne@1
|
27229 </Iteration>
|
jpayne@1
|
27230 <Iteration>
|
jpayne@1
|
27231 <Iteration_iter-num>524</Iteration_iter-num>
|
jpayne@1
|
27232 <Iteration_query-ID>Query_524</Iteration_query-ID>
|
jpayne@1
|
27233 <Iteration_query-def>fliC_d_Typhistr_CAAZ01000150_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
27234 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
27235 <Iteration_hits>
|
jpayne@1
|
27236 <Hit>
|
jpayne@1
|
27237 <Hit_num>1</Hit_num>
|
jpayne@1
|
27238 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27239 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27240 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27241 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27242 <Hit_hsps>
|
jpayne@1
|
27243 <Hsp>
|
jpayne@1
|
27244 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27245 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
27246 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
27247 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
27248 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27249 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
27250 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27251 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
27252 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27253 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27254 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
27255 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
27256 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27257 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
27258 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
27259 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
27260 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
27261 </Hsp>
|
jpayne@1
|
27262 <Hsp>
|
jpayne@1
|
27263 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27264 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27265 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27266 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27267 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27268 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27269 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27270 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27271 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27272 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27273 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27274 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27275 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27276 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27277 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27278 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27279 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27280 </Hsp>
|
jpayne@1
|
27281 </Hit_hsps>
|
jpayne@1
|
27282 </Hit>
|
jpayne@1
|
27283 </Iteration_hits>
|
jpayne@1
|
27284 <Iteration_stat>
|
jpayne@1
|
27285 <Statistics>
|
jpayne@1
|
27286 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27287 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27288 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27289 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27290 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27291 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27292 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27293 </Statistics>
|
jpayne@1
|
27294 </Iteration_stat>
|
jpayne@1
|
27295 </Iteration>
|
jpayne@1
|
27296 <Iteration>
|
jpayne@1
|
27297 <Iteration_iter-num>525</Iteration_iter-num>
|
jpayne@1
|
27298 <Iteration_query-ID>Query_525</Iteration_query-ID>
|
jpayne@1
|
27299 <Iteration_query-def>fliC_d_Typhistr_CAAW01000401_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
27300 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
27301 <Iteration_hits>
|
jpayne@1
|
27302 <Hit>
|
jpayne@1
|
27303 <Hit_num>1</Hit_num>
|
jpayne@1
|
27304 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27305 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27306 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27307 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27308 <Hit_hsps>
|
jpayne@1
|
27309 <Hsp>
|
jpayne@1
|
27310 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27311 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
27312 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
27313 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
27314 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27315 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
27316 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27317 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
27318 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27319 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27320 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
27321 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
27322 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27323 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
27324 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
27325 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
27326 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
27327 </Hsp>
|
jpayne@1
|
27328 <Hsp>
|
jpayne@1
|
27329 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27330 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27331 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27332 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27333 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27334 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27335 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27336 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27337 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27338 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27339 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27340 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27341 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27342 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27343 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27344 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27345 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27346 </Hsp>
|
jpayne@1
|
27347 </Hit_hsps>
|
jpayne@1
|
27348 </Hit>
|
jpayne@1
|
27349 </Iteration_hits>
|
jpayne@1
|
27350 <Iteration_stat>
|
jpayne@1
|
27351 <Statistics>
|
jpayne@1
|
27352 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27353 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27354 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27355 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27356 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27357 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27358 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27359 </Statistics>
|
jpayne@1
|
27360 </Iteration_stat>
|
jpayne@1
|
27361 </Iteration>
|
jpayne@1
|
27362 <Iteration>
|
jpayne@1
|
27363 <Iteration_iter-num>526</Iteration_iter-num>
|
jpayne@1
|
27364 <Iteration_query-ID>Query_526</Iteration_query-ID>
|
jpayne@1
|
27365 <Iteration_query-def>fliC_d_Typhistr_CAAX01000878_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
27366 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
27367 <Iteration_hits>
|
jpayne@1
|
27368 <Hit>
|
jpayne@1
|
27369 <Hit_num>1</Hit_num>
|
jpayne@1
|
27370 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27371 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27372 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27373 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27374 <Hit_hsps>
|
jpayne@1
|
27375 <Hsp>
|
jpayne@1
|
27376 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27377 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
27378 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
27379 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
27380 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27381 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
27382 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27383 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
27384 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27385 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27386 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
27387 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
27388 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27389 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
27390 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
27391 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
27392 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
27393 </Hsp>
|
jpayne@1
|
27394 <Hsp>
|
jpayne@1
|
27395 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27396 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27397 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27398 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27399 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27400 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27401 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27402 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27403 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27404 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27405 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27406 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27407 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27408 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27409 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27410 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27411 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27412 </Hsp>
|
jpayne@1
|
27413 </Hit_hsps>
|
jpayne@1
|
27414 </Hit>
|
jpayne@1
|
27415 </Iteration_hits>
|
jpayne@1
|
27416 <Iteration_stat>
|
jpayne@1
|
27417 <Statistics>
|
jpayne@1
|
27418 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27419 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27420 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27421 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27422 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27423 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27424 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27425 </Statistics>
|
jpayne@1
|
27426 </Iteration_stat>
|
jpayne@1
|
27427 </Iteration>
|
jpayne@1
|
27428 <Iteration>
|
jpayne@1
|
27429 <Iteration_iter-num>527</Iteration_iter-num>
|
jpayne@1
|
27430 <Iteration_query-ID>Query_527</Iteration_query-ID>
|
jpayne@1
|
27431 <Iteration_query-def>fliC_d_Typhistr_AJXA01000113_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
27432 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
27433 <Iteration_hits>
|
jpayne@1
|
27434 <Hit>
|
jpayne@1
|
27435 <Hit_num>1</Hit_num>
|
jpayne@1
|
27436 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27437 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27438 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27439 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27440 <Hit_hsps>
|
jpayne@1
|
27441 <Hsp>
|
jpayne@1
|
27442 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27443 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
27444 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
27445 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
27446 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27447 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
27448 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27449 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
27450 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27451 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27452 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
27453 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
27454 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27455 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
27456 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
27457 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
27458 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
27459 </Hsp>
|
jpayne@1
|
27460 <Hsp>
|
jpayne@1
|
27461 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27462 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27463 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27464 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27465 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27466 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27467 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27468 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27469 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27470 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27471 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27472 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27473 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27474 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27475 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27476 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27477 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27478 </Hsp>
|
jpayne@1
|
27479 </Hit_hsps>
|
jpayne@1
|
27480 </Hit>
|
jpayne@1
|
27481 </Iteration_hits>
|
jpayne@1
|
27482 <Iteration_stat>
|
jpayne@1
|
27483 <Statistics>
|
jpayne@1
|
27484 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27485 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27486 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27487 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27488 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27489 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27490 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27491 </Statistics>
|
jpayne@1
|
27492 </Iteration_stat>
|
jpayne@1
|
27493 </Iteration>
|
jpayne@1
|
27494 <Iteration>
|
jpayne@1
|
27495 <Iteration_iter-num>528</Iteration_iter-num>
|
jpayne@1
|
27496 <Iteration_query-ID>Query_528</Iteration_query-ID>
|
jpayne@1
|
27497 <Iteration_query-def>fliC_d_Typhistr_JABZ01000017_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
27498 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
27499 <Iteration_hits>
|
jpayne@1
|
27500 <Hit>
|
jpayne@1
|
27501 <Hit_num>1</Hit_num>
|
jpayne@1
|
27502 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27503 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27504 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27505 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27506 <Hit_hsps>
|
jpayne@1
|
27507 <Hsp>
|
jpayne@1
|
27508 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27509 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
27510 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
27511 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
27512 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27513 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
27514 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27515 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
27516 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27517 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27518 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
27519 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
27520 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27521 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
27522 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
27523 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
27524 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
27525 </Hsp>
|
jpayne@1
|
27526 <Hsp>
|
jpayne@1
|
27527 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27528 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27529 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27530 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27531 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27532 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27533 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27534 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27535 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27536 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27537 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27538 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27539 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27540 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27541 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27542 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27543 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27544 </Hsp>
|
jpayne@1
|
27545 </Hit_hsps>
|
jpayne@1
|
27546 </Hit>
|
jpayne@1
|
27547 </Iteration_hits>
|
jpayne@1
|
27548 <Iteration_stat>
|
jpayne@1
|
27549 <Statistics>
|
jpayne@1
|
27550 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27551 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27552 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27553 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27554 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27555 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27556 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27557 </Statistics>
|
jpayne@1
|
27558 </Iteration_stat>
|
jpayne@1
|
27559 </Iteration>
|
jpayne@1
|
27560 <Iteration>
|
jpayne@1
|
27561 <Iteration_iter-num>529</Iteration_iter-num>
|
jpayne@1
|
27562 <Iteration_query-ID>Query_529</Iteration_query-ID>
|
jpayne@1
|
27563 <Iteration_query-def>fliC_d_Typhistr_AJTD01000160_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
27564 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
27565 <Iteration_hits>
|
jpayne@1
|
27566 <Hit>
|
jpayne@1
|
27567 <Hit_num>1</Hit_num>
|
jpayne@1
|
27568 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27569 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27570 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27571 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27572 <Hit_hsps>
|
jpayne@1
|
27573 <Hsp>
|
jpayne@1
|
27574 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27575 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
27576 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
27577 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
27578 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27579 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
27580 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27581 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
27582 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27583 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27584 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
27585 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
27586 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27587 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
27588 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
27589 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
27590 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
27591 </Hsp>
|
jpayne@1
|
27592 <Hsp>
|
jpayne@1
|
27593 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27594 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27595 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27596 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27597 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27598 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27599 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27600 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27601 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27602 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27603 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27604 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27605 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27606 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27607 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27608 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27609 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27610 </Hsp>
|
jpayne@1
|
27611 </Hit_hsps>
|
jpayne@1
|
27612 </Hit>
|
jpayne@1
|
27613 </Iteration_hits>
|
jpayne@1
|
27614 <Iteration_stat>
|
jpayne@1
|
27615 <Statistics>
|
jpayne@1
|
27616 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27617 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27618 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27619 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27620 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27621 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27622 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27623 </Statistics>
|
jpayne@1
|
27624 </Iteration_stat>
|
jpayne@1
|
27625 </Iteration>
|
jpayne@1
|
27626 <Iteration>
|
jpayne@1
|
27627 <Iteration_iter-num>530</Iteration_iter-num>
|
jpayne@1
|
27628 <Iteration_query-ID>Query_530</Iteration_query-ID>
|
jpayne@1
|
27629 <Iteration_query-def>fliC_d_Typhistr_AJTE01000190_b,d,j__1509</Iteration_query-def>
|
jpayne@1
|
27630 <Iteration_query-len>1509</Iteration_query-len>
|
jpayne@1
|
27631 <Iteration_hits>
|
jpayne@1
|
27632 <Hit>
|
jpayne@1
|
27633 <Hit_num>1</Hit_num>
|
jpayne@1
|
27634 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27635 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27636 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27637 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27638 <Hit_hsps>
|
jpayne@1
|
27639 <Hsp>
|
jpayne@1
|
27640 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27641 <Hsp_bit-score>464.629</Hsp_bit-score>
|
jpayne@1
|
27642 <Hsp_score>251</Hsp_score>
|
jpayne@1
|
27643 <Hsp_evalue>1.10678e-132</Hsp_evalue>
|
jpayne@1
|
27644 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27645 <Hsp_query-to>467</Hsp_query-to>
|
jpayne@1
|
27646 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27647 <Hsp_hit-to>1277</Hsp_hit-to>
|
jpayne@1
|
27648 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27649 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27650 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
27651 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
27652 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27653 <Hsp_align-len>468</Hsp_align-len>
|
jpayne@1
|
27654 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCGAATGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTAT</Hsp_qseq>
|
jpayne@1
|
27655 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCAT</Hsp_hseq>
|
jpayne@1
|
27656 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | | || || |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| ||</Hsp_midline>
|
jpayne@1
|
27657 </Hsp>
|
jpayne@1
|
27658 <Hsp>
|
jpayne@1
|
27659 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27660 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
27661 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
27662 <Hsp_evalue>4.42633e-57</Hsp_evalue>
|
jpayne@1
|
27663 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
27664 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
27665 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27666 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27667 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27668 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27669 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27670 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27671 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27672 <Hsp_align-len>244</Hsp_align-len>
|
jpayne@1
|
27673 <Hsp_qseq>AATTGATGCTGCCTTGGCACAGGTTGATACACTTCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCAACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27674 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27675 <Hsp_midline>||||||| |||| ||| || | || || || |||||||| ||||| || |||| |||||||| | || || || |||||||| |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| ||||| ||||| || || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27676 </Hsp>
|
jpayne@1
|
27677 </Hit_hsps>
|
jpayne@1
|
27678 </Hit>
|
jpayne@1
|
27679 </Iteration_hits>
|
jpayne@1
|
27680 <Iteration_stat>
|
jpayne@1
|
27681 <Statistics>
|
jpayne@1
|
27682 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27683 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27684 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27685 <Statistics_eff-space>81551736</Statistics_eff-space>
|
jpayne@1
|
27686 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27687 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27688 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27689 </Statistics>
|
jpayne@1
|
27690 </Iteration_stat>
|
jpayne@1
|
27691 </Iteration>
|
jpayne@1
|
27692 <Iteration>
|
jpayne@1
|
27693 <Iteration_iter-num>531</Iteration_iter-num>
|
jpayne@1
|
27694 <Iteration_query-ID>Query_531</Iteration_query-ID>
|
jpayne@1
|
27695 <Iteration_query-def>fliC_r_Virchowstr_ABFH02000002_r,i__1470</Iteration_query-def>
|
jpayne@1
|
27696 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
27697 <Iteration_hits>
|
jpayne@1
|
27698 <Hit>
|
jpayne@1
|
27699 <Hit_num>1</Hit_num>
|
jpayne@1
|
27700 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27701 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27702 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27703 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27704 <Hit_hsps>
|
jpayne@1
|
27705 <Hsp>
|
jpayne@1
|
27706 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27707 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
27708 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
27709 <Hsp_evalue>6.39571e-140</Hsp_evalue>
|
jpayne@1
|
27710 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27711 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
27712 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27713 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
27714 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27715 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27716 <Hsp_identity>408</Hsp_identity>
|
jpayne@1
|
27717 <Hsp_positive>408</Hsp_positive>
|
jpayne@1
|
27718 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
27719 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
27720 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
27721 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
27722 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
27723 </Hsp>
|
jpayne@1
|
27724 <Hsp>
|
jpayne@1
|
27725 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27726 <Hsp_bit-score>219.025</Hsp_bit-score>
|
jpayne@1
|
27727 <Hsp_score>118</Hsp_score>
|
jpayne@1
|
27728 <Hsp_evalue>9.26492e-59</Hsp_evalue>
|
jpayne@1
|
27729 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
27730 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
27731 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27732 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27733 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27734 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27735 <Hsp_identity>203</Hsp_identity>
|
jpayne@1
|
27736 <Hsp_positive>203</Hsp_positive>
|
jpayne@1
|
27737 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27738 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
27739 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27740 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27741 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27742 </Hsp>
|
jpayne@1
|
27743 </Hit_hsps>
|
jpayne@1
|
27744 </Hit>
|
jpayne@1
|
27745 </Iteration_hits>
|
jpayne@1
|
27746 <Iteration_stat>
|
jpayne@1
|
27747 <Statistics>
|
jpayne@1
|
27748 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27749 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27750 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27751 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
27752 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27753 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27754 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27755 </Statistics>
|
jpayne@1
|
27756 </Iteration_stat>
|
jpayne@1
|
27757 </Iteration>
|
jpayne@1
|
27758 <Iteration>
|
jpayne@1
|
27759 <Iteration_iter-num>532</Iteration_iter-num>
|
jpayne@1
|
27760 <Iteration_query-ID>Query_532</Iteration_query-ID>
|
jpayne@1
|
27761 <Iteration_query-def>fliC_r_Weltevredenstr_ABFF01000030_r,i__1470</Iteration_query-def>
|
jpayne@1
|
27762 <Iteration_query-len>1470</Iteration_query-len>
|
jpayne@1
|
27763 <Iteration_hits>
|
jpayne@1
|
27764 <Hit>
|
jpayne@1
|
27765 <Hit_num>1</Hit_num>
|
jpayne@1
|
27766 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27767 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27768 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27769 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27770 <Hit_hsps>
|
jpayne@1
|
27771 <Hsp>
|
jpayne@1
|
27772 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27773 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
27774 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
27775 <Hsp_evalue>2.99676e-133</Hsp_evalue>
|
jpayne@1
|
27776 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27777 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
27778 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27779 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
27780 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27781 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27782 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
27783 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
27784 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27785 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
27786 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
27787 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
27788 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
27789 </Hsp>
|
jpayne@1
|
27790 <Hsp>
|
jpayne@1
|
27791 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
27792 <Hsp_bit-score>207.945</Hsp_bit-score>
|
jpayne@1
|
27793 <Hsp_score>112</Hsp_score>
|
jpayne@1
|
27794 <Hsp_evalue>2.0055e-55</Hsp_evalue>
|
jpayne@1
|
27795 <Hsp_query-from>1227</Hsp_query-from>
|
jpayne@1
|
27796 <Hsp_query-to>1470</Hsp_query-to>
|
jpayne@1
|
27797 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
27798 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
27799 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27800 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27801 <Hsp_identity>201</Hsp_identity>
|
jpayne@1
|
27802 <Hsp_positive>201</Hsp_positive>
|
jpayne@1
|
27803 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27804 <Hsp_align-len>245</Hsp_align-len>
|
jpayne@1
|
27805 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACCTGGGCAACACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_qseq>
|
jpayne@1
|
27806 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
27807 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || |||| |||||||| | || || || |||||||| ||||| || |||| || ||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
27808 </Hsp>
|
jpayne@1
|
27809 </Hit_hsps>
|
jpayne@1
|
27810 </Hit>
|
jpayne@1
|
27811 </Iteration_hits>
|
jpayne@1
|
27812 <Iteration_stat>
|
jpayne@1
|
27813 <Statistics>
|
jpayne@1
|
27814 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27815 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27816 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27817 <Statistics_eff-space>79418592</Statistics_eff-space>
|
jpayne@1
|
27818 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27819 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27820 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27821 </Statistics>
|
jpayne@1
|
27822 </Iteration_stat>
|
jpayne@1
|
27823 </Iteration>
|
jpayne@1
|
27824 <Iteration>
|
jpayne@1
|
27825 <Iteration_iter-num>533</Iteration_iter-num>
|
jpayne@1
|
27826 <Iteration_query-ID>Query_533</Iteration_query-ID>
|
jpayne@1
|
27827 <Iteration_query-def>fljB_z35_Salmonella.enterica_IIIb.38:k:z35_AY353262_other.z35__1488</Iteration_query-def>
|
jpayne@1
|
27828 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
27829 <Iteration_hits>
|
jpayne@1
|
27830 <Hit>
|
jpayne@1
|
27831 <Hit_num>1</Hit_num>
|
jpayne@1
|
27832 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27833 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27834 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27835 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27836 <Hit_hsps>
|
jpayne@1
|
27837 <Hsp>
|
jpayne@1
|
27838 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27839 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
27840 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
27841 <Hsp_evalue>3.03391e-133</Hsp_evalue>
|
jpayne@1
|
27842 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27843 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
27844 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27845 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
27846 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27847 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27848 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
27849 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
27850 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27851 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
27852 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTTTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
27853 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
27854 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | ||| || | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
27855 </Hsp>
|
jpayne@1
|
27856 </Hit_hsps>
|
jpayne@1
|
27857 </Hit>
|
jpayne@1
|
27858 </Iteration_hits>
|
jpayne@1
|
27859 <Iteration_stat>
|
jpayne@1
|
27860 <Statistics>
|
jpayne@1
|
27861 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27862 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27863 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27864 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
27865 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27866 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27867 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27868 </Statistics>
|
jpayne@1
|
27869 </Iteration_stat>
|
jpayne@1
|
27870 </Iteration>
|
jpayne@1
|
27871 <Iteration>
|
jpayne@1
|
27872 <Iteration_iter-num>534</Iteration_iter-num>
|
jpayne@1
|
27873 <Iteration_query-ID>Query_534</Iteration_query-ID>
|
jpayne@1
|
27874 <Iteration_query-def>fljB_1,2_Salmonella.enterica_Typhimurium_AY353264_1__1521</Iteration_query-def>
|
jpayne@1
|
27875 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
27876 <Iteration_hits>
|
jpayne@1
|
27877 <Hit>
|
jpayne@1
|
27878 <Hit_num>1</Hit_num>
|
jpayne@1
|
27879 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27880 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27881 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27882 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27883 <Hit_hsps>
|
jpayne@1
|
27884 <Hsp>
|
jpayne@1
|
27885 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27886 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
27887 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
27888 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
27889 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27890 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
27891 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27892 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
27893 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27894 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27895 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
27896 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
27897 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27898 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
27899 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
27900 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
27901 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
27902 </Hsp>
|
jpayne@1
|
27903 </Hit_hsps>
|
jpayne@1
|
27904 </Hit>
|
jpayne@1
|
27905 </Iteration_hits>
|
jpayne@1
|
27906 <Iteration_stat>
|
jpayne@1
|
27907 <Statistics>
|
jpayne@1
|
27908 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27909 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27910 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27911 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
27912 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27913 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27914 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27915 </Statistics>
|
jpayne@1
|
27916 </Iteration_stat>
|
jpayne@1
|
27917 </Iteration>
|
jpayne@1
|
27918 <Iteration>
|
jpayne@1
|
27919 <Iteration_iter-num>535</Iteration_iter-num>
|
jpayne@1
|
27920 <Iteration_query-ID>Query_535</Iteration_query-ID>
|
jpayne@1
|
27921 <Iteration_query-def>fljB_1,2_Salmonella.enterica_Heidelberg_AY353265_1__1521</Iteration_query-def>
|
jpayne@1
|
27922 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
27923 <Iteration_hits>
|
jpayne@1
|
27924 <Hit>
|
jpayne@1
|
27925 <Hit_num>1</Hit_num>
|
jpayne@1
|
27926 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27927 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27928 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27929 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27930 <Hit_hsps>
|
jpayne@1
|
27931 <Hsp>
|
jpayne@1
|
27932 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27933 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
27934 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
27935 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
27936 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27937 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
27938 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27939 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
27940 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27941 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27942 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
27943 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
27944 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
27945 <Hsp_align-len>482</Hsp_align-len>
|
jpayne@1
|
27946 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACA-CCACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAACCTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
27947 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGA-TGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
27948 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||| ||| ||| ||||||||||| || ||||| |||||| | || |||||||||</Hsp_midline>
|
jpayne@1
|
27949 </Hsp>
|
jpayne@1
|
27950 </Hit_hsps>
|
jpayne@1
|
27951 </Hit>
|
jpayne@1
|
27952 </Iteration_hits>
|
jpayne@1
|
27953 <Iteration_stat>
|
jpayne@1
|
27954 <Statistics>
|
jpayne@1
|
27955 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
27956 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
27957 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
27958 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
27959 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
27960 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
27961 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
27962 </Statistics>
|
jpayne@1
|
27963 </Iteration_stat>
|
jpayne@1
|
27964 </Iteration>
|
jpayne@1
|
27965 <Iteration>
|
jpayne@1
|
27966 <Iteration_iter-num>536</Iteration_iter-num>
|
jpayne@1
|
27967 <Iteration_query-ID>Query_536</Iteration_query-ID>
|
jpayne@1
|
27968 <Iteration_query-def>fljB_1,2_Salmonella.enterica_Derby_AY353266_1__1521</Iteration_query-def>
|
jpayne@1
|
27969 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
27970 <Iteration_hits>
|
jpayne@1
|
27971 <Hit>
|
jpayne@1
|
27972 <Hit_num>1</Hit_num>
|
jpayne@1
|
27973 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
27974 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
27975 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
27976 <Hit_len>1962</Hit_len>
|
jpayne@1
|
27977 <Hit_hsps>
|
jpayne@1
|
27978 <Hsp>
|
jpayne@1
|
27979 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
27980 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
27981 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
27982 <Hsp_evalue>6.71469e-130</Hsp_evalue>
|
jpayne@1
|
27983 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
27984 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
27985 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
27986 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
27987 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
27988 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
27989 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
27990 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
27991 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
27992 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
27993 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
27994 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
27995 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
27996 </Hsp>
|
jpayne@1
|
27997 </Hit_hsps>
|
jpayne@1
|
27998 </Hit>
|
jpayne@1
|
27999 </Iteration_hits>
|
jpayne@1
|
28000 <Iteration_stat>
|
jpayne@1
|
28001 <Statistics>
|
jpayne@1
|
28002 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28003 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28004 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28005 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28006 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28007 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28008 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28009 </Statistics>
|
jpayne@1
|
28010 </Iteration_stat>
|
jpayne@1
|
28011 </Iteration>
|
jpayne@1
|
28012 <Iteration>
|
jpayne@1
|
28013 <Iteration_iter-num>537</Iteration_iter-num>
|
jpayne@1
|
28014 <Iteration_query-ID>Query_537</Iteration_query-ID>
|
jpayne@1
|
28015 <Iteration_query-def>fljB_1,2_Salmonella.enterica_Stanley_AY353267_1__1521</Iteration_query-def>
|
jpayne@1
|
28016 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28017 <Iteration_hits>
|
jpayne@1
|
28018 <Hit>
|
jpayne@1
|
28019 <Hit_num>1</Hit_num>
|
jpayne@1
|
28020 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28021 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28022 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28023 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28024 <Hit_hsps>
|
jpayne@1
|
28025 <Hsp>
|
jpayne@1
|
28026 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28027 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
28028 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
28029 <Hsp_evalue>3.10202e-133</Hsp_evalue>
|
jpayne@1
|
28030 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28031 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28032 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28033 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28034 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28035 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28036 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
28037 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
28038 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
28039 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
28040 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28041 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28042 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28043 </Hsp>
|
jpayne@1
|
28044 </Hit_hsps>
|
jpayne@1
|
28045 </Hit>
|
jpayne@1
|
28046 </Iteration_hits>
|
jpayne@1
|
28047 <Iteration_stat>
|
jpayne@1
|
28048 <Statistics>
|
jpayne@1
|
28049 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28050 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28051 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28052 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28053 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28054 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28055 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28056 </Statistics>
|
jpayne@1
|
28057 </Iteration_stat>
|
jpayne@1
|
28058 </Iteration>
|
jpayne@1
|
28059 <Iteration>
|
jpayne@1
|
28060 <Iteration_iter-num>538</Iteration_iter-num>
|
jpayne@1
|
28061 <Iteration_query-ID>Query_538</Iteration_query-ID>
|
jpayne@1
|
28062 <Iteration_query-def>fljB_1,2_Salmonella.enterica_Typhimurium_AY353268_1__1521</Iteration_query-def>
|
jpayne@1
|
28063 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28064 <Iteration_hits>
|
jpayne@1
|
28065 <Hit>
|
jpayne@1
|
28066 <Hit_num>1</Hit_num>
|
jpayne@1
|
28067 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28068 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28069 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28070 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28071 <Hit_hsps>
|
jpayne@1
|
28072 <Hsp>
|
jpayne@1
|
28073 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28074 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
28075 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
28076 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
28077 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28078 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28079 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28080 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28081 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28082 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28083 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
28084 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
28085 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28086 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28087 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28088 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28089 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28090 </Hsp>
|
jpayne@1
|
28091 </Hit_hsps>
|
jpayne@1
|
28092 </Hit>
|
jpayne@1
|
28093 </Iteration_hits>
|
jpayne@1
|
28094 <Iteration_stat>
|
jpayne@1
|
28095 <Statistics>
|
jpayne@1
|
28096 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28097 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28098 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28099 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28100 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28101 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28102 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28103 </Statistics>
|
jpayne@1
|
28104 </Iteration_stat>
|
jpayne@1
|
28105 </Iteration>
|
jpayne@1
|
28106 <Iteration>
|
jpayne@1
|
28107 <Iteration_iter-num>539</Iteration_iter-num>
|
jpayne@1
|
28108 <Iteration_query-ID>Query_539</Iteration_query-ID>
|
jpayne@1
|
28109 <Iteration_query-def>fljB_1,2_Salmonella.enterica_Muenchen_AY353269_1__1521</Iteration_query-def>
|
jpayne@1
|
28110 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28111 <Iteration_hits>
|
jpayne@1
|
28112 <Hit>
|
jpayne@1
|
28113 <Hit_num>1</Hit_num>
|
jpayne@1
|
28114 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28115 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28116 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28117 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28118 <Hit_hsps>
|
jpayne@1
|
28119 <Hsp>
|
jpayne@1
|
28120 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28121 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
28122 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
28123 <Hsp_evalue>1.44323e-131</Hsp_evalue>
|
jpayne@1
|
28124 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28125 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28126 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28127 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28128 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28129 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28130 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
28131 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
28132 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
28133 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
28134 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAATAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28135 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28136 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28137 </Hsp>
|
jpayne@1
|
28138 </Hit_hsps>
|
jpayne@1
|
28139 </Hit>
|
jpayne@1
|
28140 </Iteration_hits>
|
jpayne@1
|
28141 <Iteration_stat>
|
jpayne@1
|
28142 <Statistics>
|
jpayne@1
|
28143 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28144 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28145 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28146 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28147 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28148 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28149 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28150 </Statistics>
|
jpayne@1
|
28151 </Iteration_stat>
|
jpayne@1
|
28152 </Iteration>
|
jpayne@1
|
28153 <Iteration>
|
jpayne@1
|
28154 <Iteration_iter-num>540</Iteration_iter-num>
|
jpayne@1
|
28155 <Iteration_query-ID>Query_540</Iteration_query-ID>
|
jpayne@1
|
28156 <Iteration_query-def>fljB_1,2_Salmonella.enterica_Litchfield_AY353271_1__1521</Iteration_query-def>
|
jpayne@1
|
28157 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28158 <Iteration_hits>
|
jpayne@1
|
28159 <Hit>
|
jpayne@1
|
28160 <Hit_num>1</Hit_num>
|
jpayne@1
|
28161 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28162 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28163 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28164 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28165 <Hit_hsps>
|
jpayne@1
|
28166 <Hsp>
|
jpayne@1
|
28167 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28168 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
28169 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
28170 <Hsp_evalue>3.10202e-133</Hsp_evalue>
|
jpayne@1
|
28171 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28172 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28173 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28174 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28175 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28176 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28177 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
28178 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
28179 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
28180 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
28181 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28182 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28183 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28184 </Hsp>
|
jpayne@1
|
28185 </Hit_hsps>
|
jpayne@1
|
28186 </Hit>
|
jpayne@1
|
28187 </Iteration_hits>
|
jpayne@1
|
28188 <Iteration_stat>
|
jpayne@1
|
28189 <Statistics>
|
jpayne@1
|
28190 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28191 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28192 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28193 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28194 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28195 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28196 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28197 </Statistics>
|
jpayne@1
|
28198 </Iteration_stat>
|
jpayne@1
|
28199 </Iteration>
|
jpayne@1
|
28200 <Iteration>
|
jpayne@1
|
28201 <Iteration_iter-num>541</Iteration_iter-num>
|
jpayne@1
|
28202 <Iteration_query-ID>Query_541</Iteration_query-ID>
|
jpayne@1
|
28203 <Iteration_query-def>fljB_1,2_Salmonella.enterica_1,4,5,12:i:1,2,7_AY353272_1__1521</Iteration_query-def>
|
jpayne@1
|
28204 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28205 <Iteration_hits>
|
jpayne@1
|
28206 <Hit>
|
jpayne@1
|
28207 <Hit_num>1</Hit_num>
|
jpayne@1
|
28208 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28209 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28210 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28211 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28212 <Hit_hsps>
|
jpayne@1
|
28213 <Hsp>
|
jpayne@1
|
28214 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28215 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
28216 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
28217 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
28218 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28219 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28220 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28221 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28222 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28223 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28224 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
28225 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
28226 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28227 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28228 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28229 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28230 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28231 </Hsp>
|
jpayne@1
|
28232 </Hit_hsps>
|
jpayne@1
|
28233 </Hit>
|
jpayne@1
|
28234 </Iteration_hits>
|
jpayne@1
|
28235 <Iteration_stat>
|
jpayne@1
|
28236 <Statistics>
|
jpayne@1
|
28237 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28238 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28239 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28240 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28241 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28242 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28243 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28244 </Statistics>
|
jpayne@1
|
28245 </Iteration_stat>
|
jpayne@1
|
28246 </Iteration>
|
jpayne@1
|
28247 <Iteration>
|
jpayne@1
|
28248 <Iteration_iter-num>542</Iteration_iter-num>
|
jpayne@1
|
28249 <Iteration_query-ID>Query_542</Iteration_query-ID>
|
jpayne@1
|
28250 <Iteration_query-def>fljB_1,5,7_Salmonella.enterica_IIIb.6,7:l,v:1,5,7_AY353273_1__1521</Iteration_query-def>
|
jpayne@1
|
28251 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28252 <Iteration_hits>
|
jpayne@1
|
28253 <Hit>
|
jpayne@1
|
28254 <Hit_num>1</Hit_num>
|
jpayne@1
|
28255 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28256 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28257 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28258 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28259 <Hit_hsps>
|
jpayne@1
|
28260 <Hsp>
|
jpayne@1
|
28261 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28262 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
28263 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
28264 <Hsp_evalue>3.10202e-133</Hsp_evalue>
|
jpayne@1
|
28265 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28266 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28267 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28268 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28269 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28270 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28271 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
28272 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
28273 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28274 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28275 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGTTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28276 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28277 <Hsp_midline>||||||||||| || || || ||||| |||||| || ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
28278 </Hsp>
|
jpayne@1
|
28279 </Hit_hsps>
|
jpayne@1
|
28280 </Hit>
|
jpayne@1
|
28281 </Iteration_hits>
|
jpayne@1
|
28282 <Iteration_stat>
|
jpayne@1
|
28283 <Statistics>
|
jpayne@1
|
28284 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28285 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28286 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28287 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28288 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28289 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28290 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28291 </Statistics>
|
jpayne@1
|
28292 </Iteration_stat>
|
jpayne@1
|
28293 </Iteration>
|
jpayne@1
|
28294 <Iteration>
|
jpayne@1
|
28295 <Iteration_iter-num>543</Iteration_iter-num>
|
jpayne@1
|
28296 <Iteration_query-ID>Query_543</Iteration_query-ID>
|
jpayne@1
|
28297 <Iteration_query-def>fljB_1,5,7_Salmonella.enterica_IIIb.48:l,w:1,5,7:z50_AY353274_1__1521</Iteration_query-def>
|
jpayne@1
|
28298 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28299 <Iteration_hits>
|
jpayne@1
|
28300 <Hit>
|
jpayne@1
|
28301 <Hit_num>1</Hit_num>
|
jpayne@1
|
28302 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28303 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28304 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28305 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28306 <Hit_hsps>
|
jpayne@1
|
28307 <Hsp>
|
jpayne@1
|
28308 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28309 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
28310 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
28311 <Hsp_evalue>3.10202e-133</Hsp_evalue>
|
jpayne@1
|
28312 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28313 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28314 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28315 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28316 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28317 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28318 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
28319 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
28320 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28321 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28322 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGTTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28323 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28324 <Hsp_midline>||||||||||| || || || ||||| |||||| || ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
28325 </Hsp>
|
jpayne@1
|
28326 </Hit_hsps>
|
jpayne@1
|
28327 </Hit>
|
jpayne@1
|
28328 </Iteration_hits>
|
jpayne@1
|
28329 <Iteration_stat>
|
jpayne@1
|
28330 <Statistics>
|
jpayne@1
|
28331 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28332 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28333 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28334 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28335 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28336 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28337 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28338 </Statistics>
|
jpayne@1
|
28339 </Iteration_stat>
|
jpayne@1
|
28340 </Iteration>
|
jpayne@1
|
28341 <Iteration>
|
jpayne@1
|
28342 <Iteration_iter-num>544</Iteration_iter-num>
|
jpayne@1
|
28343 <Iteration_query-ID>Query_544</Iteration_query-ID>
|
jpayne@1
|
28344 <Iteration_query-def>fljB_1,5_from-Ibadan-micro-assembly_SRR1753831_1__1521</Iteration_query-def>
|
jpayne@1
|
28345 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28346 <Iteration_hits>
|
jpayne@1
|
28347 <Hit>
|
jpayne@1
|
28348 <Hit_num>1</Hit_num>
|
jpayne@1
|
28349 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28350 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28351 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28352 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28353 <Hit_hsps>
|
jpayne@1
|
28354 <Hsp>
|
jpayne@1
|
28355 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28356 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
28357 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
28358 <Hsp_evalue>1.45347e-126</Hsp_evalue>
|
jpayne@1
|
28359 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28360 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28361 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28362 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28363 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28364 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28365 <Hsp_identity>401</Hsp_identity>
|
jpayne@1
|
28366 <Hsp_positive>401</Hsp_positive>
|
jpayne@1
|
28367 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28368 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28369 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCACAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28370 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28371 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28372 </Hsp>
|
jpayne@1
|
28373 </Hit_hsps>
|
jpayne@1
|
28374 </Hit>
|
jpayne@1
|
28375 </Iteration_hits>
|
jpayne@1
|
28376 <Iteration_stat>
|
jpayne@1
|
28377 <Statistics>
|
jpayne@1
|
28378 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28379 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28380 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28381 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28382 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28383 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28384 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28385 </Statistics>
|
jpayne@1
|
28386 </Iteration_stat>
|
jpayne@1
|
28387 </Iteration>
|
jpayne@1
|
28388 <Iteration>
|
jpayne@1
|
28389 <Iteration_iter-num>545</Iteration_iter-num>
|
jpayne@1
|
28390 <Iteration_query-ID>Query_545</Iteration_query-ID>
|
jpayne@1
|
28391 <Iteration_query-def>fljB_1,5_from-Infantis-micro-assembly_SRR1106258_1__1521</Iteration_query-def>
|
jpayne@1
|
28392 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28393 <Iteration_hits>
|
jpayne@1
|
28394 <Hit>
|
jpayne@1
|
28395 <Hit_num>1</Hit_num>
|
jpayne@1
|
28396 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28397 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28398 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28399 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28400 <Hit_hsps>
|
jpayne@1
|
28401 <Hsp>
|
jpayne@1
|
28402 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28403 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
28404 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
28405 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
28406 <Hsp_query-from>1042</Hsp_query-from>
|
jpayne@1
|
28407 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
28408 <Hsp_hit-from>1264</Hsp_hit-from>
|
jpayne@1
|
28409 <Hsp_hit-to>1743</Hsp_hit-to>
|
jpayne@1
|
28410 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28411 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
28412 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
28413 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
28414 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28415 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28416 <Hsp_qseq>CAGATCGATATCGATAGTTTCACCGTCGTTGGCACCAACCTGGATGGTCAGGGTGTTGTCCTGCGCCAGGACTTTCACGCCGTTGAACTGAGTCTGGCCGGATACACGGTCGATTTCGTTCAGGCGCTGGGTG-ATTTCAGCCTGGATGGAGTCGAGGTCAGACTGGGAGTTGGTGCTGTTAGCAGACTGAACCGCCAGTTCACGCACACGCTGCAGGTTGTTGTTGATTTCGTTCAGCGCGCCTTCAGTGGTCTGCGCAATGGAGATACCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTGATGTTCGCGGTAAAACGGTTAGCAATCGCCTGACCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAAGACAGACGCTCGATAGCGGTGCCCAGTGCGGACTGGGATTTGTTCAGGTTATTCTGGGTCAGCAGCGACAGACTGTTAGTGTTGATTACTTGTGCCAT</Hsp_qseq>
|
jpayne@1
|
28417 <Hsp_hseq>CAGATCGATGGTAATGGTTTCACCATCGTTAGCACCAACCTGGATTTTCATCTGGTTGTCCTGAGACAGGACTTTAACACCGTTAAATTGAGTCTGATTAGAAACGCGATCGATTTCTTCCAGACG-TTGCTGAATTTCATCCTGGATAGATTTCAGATCGGAATCAGAGTTAGTCCCGTTAGTGGCCTGAACAGACAACTCACGCACACGCTGCAGGTTGTTGTTAATTTCATTCAGCGCACCTTCAGTGGTCTGCGCAATAGAAATGCCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTGATATTAGAAGTGAAGCGGTTAGCAATCGCCTGGCCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAGGACAGACGCTCAATAGCGGAACTCAGTGAGGACTGAGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_hseq>
|
jpayne@1
|
28418 <Hsp_midline>||||||||| || |||||||| ||||| |||||||||||||| ||| ||||||||| | ||||||||| || ||||| || |||||||| || || || |||||||| | ||| || | | || |||||| ||||||| || | || || || | ||||| || | ||||| | |||||| | || |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| || | || || ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||||| |||||| ||||||||||||||||||||||||| ||||||||| ||||| || || || |||||||||||</Hsp_midline>
|
jpayne@1
|
28419 </Hsp>
|
jpayne@1
|
28420 </Hit_hsps>
|
jpayne@1
|
28421 </Hit>
|
jpayne@1
|
28422 </Iteration_hits>
|
jpayne@1
|
28423 <Iteration_stat>
|
jpayne@1
|
28424 <Statistics>
|
jpayne@1
|
28425 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28426 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28427 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28428 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28429 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28430 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28431 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28432 </Statistics>
|
jpayne@1
|
28433 </Iteration_stat>
|
jpayne@1
|
28434 </Iteration>
|
jpayne@1
|
28435 <Iteration>
|
jpayne@1
|
28436 <Iteration_iter-num>546</Iteration_iter-num>
|
jpayne@1
|
28437 <Iteration_query-ID>Query_546</Iteration_query-ID>
|
jpayne@1
|
28438 <Iteration_query-def>fljB_1,5_from-cdc_Stk2184_1__1521</Iteration_query-def>
|
jpayne@1
|
28439 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28440 <Iteration_hits>
|
jpayne@1
|
28441 <Hit>
|
jpayne@1
|
28442 <Hit_num>1</Hit_num>
|
jpayne@1
|
28443 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28444 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28445 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28446 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28447 <Hit_hsps>
|
jpayne@1
|
28448 <Hsp>
|
jpayne@1
|
28449 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28450 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
28451 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
28452 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
28453 <Hsp_query-from>1042</Hsp_query-from>
|
jpayne@1
|
28454 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
28455 <Hsp_hit-from>1264</Hsp_hit-from>
|
jpayne@1
|
28456 <Hsp_hit-to>1743</Hsp_hit-to>
|
jpayne@1
|
28457 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28458 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
28459 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
28460 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
28461 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28462 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28463 <Hsp_qseq>CAGATCGATATCGATAGTTTCACCGTCGTTGGCACCAACCTGGATGGTCAGGGTGTTGTCCTGCGCCAGGACTTTCACGCCGTTGAACTGGGTCTGGCCGGATACACGGTCGATTTCGTTCAGACGCTGGGTG-ATTTCAGCCTGGATGGAGTCAAGGTCAGACTGGGAGTTGGTGCTGTTAGCAGACTGAACTGCCAGTTCACGCACGCGCTGCAGGTTGTTGTTGATTTCGTTCAGCGCGCCTTCAGTGGTCTGCGCAATAGAAATACCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTAATGTTCGCGGTGAAACGGTTAGCAATCGCCTGACCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAAGACAGACGCTCGATAGCGGTGCCCAGTGCGGACTGGGATTTGTTCAGGTTATTCTGAGTCAGCAGCGACAGACTGTTAGTGTTGATTACTTGTGCCAT</Hsp_qseq>
|
jpayne@1
|
28464 <Hsp_hseq>CAGATCGATGGTAATGGTTTCACCATCGTTAGCACCAACCTGGATTTTCATCTGGTTGTCCTGAGACAGGACTTTAACACCGTTAAATTGAGTCTGATTAGAAACGCGATCGATTTCTTCCAGACG-TTGCTGAATTTCATCCTGGATAGATTTCAGATCGGAATCAGAGTTAGTCCCGTTAGTGGCCTGAACAGACAACTCACGCACACGCTGCAGGTTGTTGTTAATTTCATTCAGCGCACCTTCAGTGGTCTGCGCAATAGAAATGCCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTGATATTAGAAGTGAAGCGGTTAGCAATCGCCTGGCCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAGGACAGACGCTCAATAGCGGAACTCAGTGAGGACTGAGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_hseq>
|
jpayne@1
|
28465 <Hsp_midline>||||||||| || |||||||| ||||| |||||||||||||| ||| ||||||||| | ||||||||| || ||||| || || ||||| || || || |||||||| | |||||| | | || |||||| ||||||| || | || || || | ||||| || | ||||| | |||||| | || |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || | ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||||| |||||| |||||||||||||||||||| |||| ||||||||| ||||| || || || |||||||||||</Hsp_midline>
|
jpayne@1
|
28466 </Hsp>
|
jpayne@1
|
28467 </Hit_hsps>
|
jpayne@1
|
28468 </Hit>
|
jpayne@1
|
28469 </Iteration_hits>
|
jpayne@1
|
28470 <Iteration_stat>
|
jpayne@1
|
28471 <Statistics>
|
jpayne@1
|
28472 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28473 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28474 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28475 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28476 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28477 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28478 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28479 </Statistics>
|
jpayne@1
|
28480 </Iteration_stat>
|
jpayne@1
|
28481 </Iteration>
|
jpayne@1
|
28482 <Iteration>
|
jpayne@1
|
28483 <Iteration_iter-num>547</Iteration_iter-num>
|
jpayne@1
|
28484 <Iteration_query-ID>Query_547</Iteration_query-ID>
|
jpayne@1
|
28485 <Iteration_query-def>fljB_1,2_from-Brazzaville_SRR2058145_1__1521</Iteration_query-def>
|
jpayne@1
|
28486 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28487 <Iteration_hits>
|
jpayne@1
|
28488 <Hit>
|
jpayne@1
|
28489 <Hit_num>1</Hit_num>
|
jpayne@1
|
28490 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28491 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28492 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28493 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28494 <Hit_hsps>
|
jpayne@1
|
28495 <Hsp>
|
jpayne@1
|
28496 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28497 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
28498 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
28499 <Hsp_evalue>1.45347e-126</Hsp_evalue>
|
jpayne@1
|
28500 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28501 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28502 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28503 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28504 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28505 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28506 <Hsp_identity>401</Hsp_identity>
|
jpayne@1
|
28507 <Hsp_positive>401</Hsp_positive>
|
jpayne@1
|
28508 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28509 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28510 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGACAGACCCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28511 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28512 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | |||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || || |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||| || || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || || || |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28513 </Hsp>
|
jpayne@1
|
28514 </Hit_hsps>
|
jpayne@1
|
28515 </Hit>
|
jpayne@1
|
28516 </Iteration_hits>
|
jpayne@1
|
28517 <Iteration_stat>
|
jpayne@1
|
28518 <Statistics>
|
jpayne@1
|
28519 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28520 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28521 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28522 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28523 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28524 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28525 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28526 </Statistics>
|
jpayne@1
|
28527 </Iteration_stat>
|
jpayne@1
|
28528 </Iteration>
|
jpayne@1
|
28529 <Iteration>
|
jpayne@1
|
28530 <Iteration_iter-num>548</Iteration_iter-num>
|
jpayne@1
|
28531 <Iteration_query-ID>Query_548</Iteration_query-ID>
|
jpayne@1
|
28532 <Iteration_query-def>fljB_1,2,7_Salmonella.enterica_Kambole_AY353275_1__1521</Iteration_query-def>
|
jpayne@1
|
28533 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28534 <Iteration_hits>
|
jpayne@1
|
28535 <Hit>
|
jpayne@1
|
28536 <Hit_num>1</Hit_num>
|
jpayne@1
|
28537 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28538 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28539 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28540 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28541 <Hit_hsps>
|
jpayne@1
|
28542 <Hsp>
|
jpayne@1
|
28543 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28544 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
28545 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
28546 <Hsp_evalue>1.44323e-131</Hsp_evalue>
|
jpayne@1
|
28547 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28548 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28549 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28550 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28551 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28552 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28553 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
28554 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
28555 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28556 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28557 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAAACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGATGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28558 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28559 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| |||||||||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28560 </Hsp>
|
jpayne@1
|
28561 </Hit_hsps>
|
jpayne@1
|
28562 </Hit>
|
jpayne@1
|
28563 </Iteration_hits>
|
jpayne@1
|
28564 <Iteration_stat>
|
jpayne@1
|
28565 <Statistics>
|
jpayne@1
|
28566 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28567 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28568 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28569 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28570 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28571 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28572 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28573 </Statistics>
|
jpayne@1
|
28574 </Iteration_stat>
|
jpayne@1
|
28575 </Iteration>
|
jpayne@1
|
28576 <Iteration>
|
jpayne@1
|
28577 <Iteration_iter-num>549</Iteration_iter-num>
|
jpayne@1
|
28578 <Iteration_query-ID>Query_549</Iteration_query-ID>
|
jpayne@1
|
28579 <Iteration_query-def>fljB_1,2,7_Salmonella.enterica_Eingedi_AY353276_1__1521</Iteration_query-def>
|
jpayne@1
|
28580 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28581 <Iteration_hits>
|
jpayne@1
|
28582 <Hit>
|
jpayne@1
|
28583 <Hit_num>1</Hit_num>
|
jpayne@1
|
28584 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28585 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28586 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28587 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28588 <Hit_hsps>
|
jpayne@1
|
28589 <Hsp>
|
jpayne@1
|
28590 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28591 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
28592 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
28593 <Hsp_evalue>1.44323e-131</Hsp_evalue>
|
jpayne@1
|
28594 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28595 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28596 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28597 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28598 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28599 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28600 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
28601 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
28602 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28603 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28604 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAAACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGATGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28605 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28606 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| |||||||||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28607 </Hsp>
|
jpayne@1
|
28608 </Hit_hsps>
|
jpayne@1
|
28609 </Hit>
|
jpayne@1
|
28610 </Iteration_hits>
|
jpayne@1
|
28611 <Iteration_stat>
|
jpayne@1
|
28612 <Statistics>
|
jpayne@1
|
28613 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28614 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28615 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28616 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28617 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28618 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28619 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28620 </Statistics>
|
jpayne@1
|
28621 </Iteration_stat>
|
jpayne@1
|
28622 </Iteration>
|
jpayne@1
|
28623 <Iteration>
|
jpayne@1
|
28624 <Iteration_iter-num>550</Iteration_iter-num>
|
jpayne@1
|
28625 <Iteration_query-ID>Query_550</Iteration_query-ID>
|
jpayne@1
|
28626 <Iteration_query-def>fljB_1,2,7_Salmonella.enterica_Kambole_AY353277_1__1521</Iteration_query-def>
|
jpayne@1
|
28627 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28628 <Iteration_hits>
|
jpayne@1
|
28629 <Hit>
|
jpayne@1
|
28630 <Hit_num>1</Hit_num>
|
jpayne@1
|
28631 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28632 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28633 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28634 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28635 <Hit_hsps>
|
jpayne@1
|
28636 <Hsp>
|
jpayne@1
|
28637 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28638 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
28639 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
28640 <Hsp_evalue>1.44323e-131</Hsp_evalue>
|
jpayne@1
|
28641 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28642 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28643 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28644 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28645 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28646 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28647 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
28648 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
28649 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28650 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28651 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAAACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGATGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28652 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28653 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| |||||||||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28654 </Hsp>
|
jpayne@1
|
28655 </Hit_hsps>
|
jpayne@1
|
28656 </Hit>
|
jpayne@1
|
28657 </Iteration_hits>
|
jpayne@1
|
28658 <Iteration_stat>
|
jpayne@1
|
28659 <Statistics>
|
jpayne@1
|
28660 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28661 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28662 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28663 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28664 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28665 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28666 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28667 </Statistics>
|
jpayne@1
|
28668 </Iteration_stat>
|
jpayne@1
|
28669 </Iteration>
|
jpayne@1
|
28670 <Iteration>
|
jpayne@1
|
28671 <Iteration_iter-num>551</Iteration_iter-num>
|
jpayne@1
|
28672 <Iteration_query-ID>Query_551</Iteration_query-ID>
|
jpayne@1
|
28673 <Iteration_query-def>fljB_1,5_Salmonella.enterica_IIIb.61:k:1,5_AY353278_1__1521</Iteration_query-def>
|
jpayne@1
|
28674 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28675 <Iteration_hits>
|
jpayne@1
|
28676 <Hit>
|
jpayne@1
|
28677 <Hit_num>1</Hit_num>
|
jpayne@1
|
28678 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28679 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28680 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28681 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28682 <Hit_hsps>
|
jpayne@1
|
28683 <Hsp>
|
jpayne@1
|
28684 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28685 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
28686 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
28687 <Hsp_evalue>3.10202e-133</Hsp_evalue>
|
jpayne@1
|
28688 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28689 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28690 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28691 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28692 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28693 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28694 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
28695 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
28696 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28697 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28698 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGTTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28699 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28700 <Hsp_midline>||||||||||| || || || ||||| |||||| || ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
28701 </Hsp>
|
jpayne@1
|
28702 </Hit_hsps>
|
jpayne@1
|
28703 </Hit>
|
jpayne@1
|
28704 </Iteration_hits>
|
jpayne@1
|
28705 <Iteration_stat>
|
jpayne@1
|
28706 <Statistics>
|
jpayne@1
|
28707 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28708 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28709 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28710 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28711 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28712 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28713 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28714 </Statistics>
|
jpayne@1
|
28715 </Iteration_stat>
|
jpayne@1
|
28716 </Iteration>
|
jpayne@1
|
28717 <Iteration>
|
jpayne@1
|
28718 <Iteration_iter-num>552</Iteration_iter-num>
|
jpayne@1
|
28719 <Iteration_query-ID>Query_552</Iteration_query-ID>
|
jpayne@1
|
28720 <Iteration_query-def>fljB_1,5_Salmonella.enterica_61:l,v:1,5_AY353279_1__1521</Iteration_query-def>
|
jpayne@1
|
28721 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28722 <Iteration_hits>
|
jpayne@1
|
28723 <Hit>
|
jpayne@1
|
28724 <Hit_num>1</Hit_num>
|
jpayne@1
|
28725 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28726 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28727 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28728 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28729 <Hit_hsps>
|
jpayne@1
|
28730 <Hsp>
|
jpayne@1
|
28731 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28732 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
28733 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
28734 <Hsp_evalue>3.10202e-133</Hsp_evalue>
|
jpayne@1
|
28735 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28736 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28737 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28738 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28739 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28740 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28741 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
28742 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
28743 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28744 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28745 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGTTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28746 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28747 <Hsp_midline>||||||||||| || || || ||||| |||||| || ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
28748 </Hsp>
|
jpayne@1
|
28749 </Hit_hsps>
|
jpayne@1
|
28750 </Hit>
|
jpayne@1
|
28751 </Iteration_hits>
|
jpayne@1
|
28752 <Iteration_stat>
|
jpayne@1
|
28753 <Statistics>
|
jpayne@1
|
28754 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28755 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28756 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28757 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28758 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28759 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28760 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28761 </Statistics>
|
jpayne@1
|
28762 </Iteration_stat>
|
jpayne@1
|
28763 </Iteration>
|
jpayne@1
|
28764 <Iteration>
|
jpayne@1
|
28765 <Iteration_iter-num>553</Iteration_iter-num>
|
jpayne@1
|
28766 <Iteration_query-ID>Query_553</Iteration_query-ID>
|
jpayne@1
|
28767 <Iteration_query-def>fljB_1,5_Salmonella.enterica_Rough:r:1,5_AY353280_1__1521</Iteration_query-def>
|
jpayne@1
|
28768 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28769 <Iteration_hits>
|
jpayne@1
|
28770 <Hit>
|
jpayne@1
|
28771 <Hit_num>1</Hit_num>
|
jpayne@1
|
28772 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28773 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28774 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28775 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28776 <Hit_hsps>
|
jpayne@1
|
28777 <Hsp>
|
jpayne@1
|
28778 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28779 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
28780 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
28781 <Hsp_evalue>6.71469e-130</Hsp_evalue>
|
jpayne@1
|
28782 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28783 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28784 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28785 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28786 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28787 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28788 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
28789 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
28790 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28791 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28792 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28793 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28794 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28795 </Hsp>
|
jpayne@1
|
28796 </Hit_hsps>
|
jpayne@1
|
28797 </Hit>
|
jpayne@1
|
28798 </Iteration_hits>
|
jpayne@1
|
28799 <Iteration_stat>
|
jpayne@1
|
28800 <Statistics>
|
jpayne@1
|
28801 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28802 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28803 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28804 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28805 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28806 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28807 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28808 </Statistics>
|
jpayne@1
|
28809 </Iteration_stat>
|
jpayne@1
|
28810 </Iteration>
|
jpayne@1
|
28811 <Iteration>
|
jpayne@1
|
28812 <Iteration_iter-num>554</Iteration_iter-num>
|
jpayne@1
|
28813 <Iteration_query-ID>Query_554</Iteration_query-ID>
|
jpayne@1
|
28814 <Iteration_query-def>fljB_1,5_Salmonella.enterica_Rough:r:1,5_AY353281_1__1521</Iteration_query-def>
|
jpayne@1
|
28815 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28816 <Iteration_hits>
|
jpayne@1
|
28817 <Hit>
|
jpayne@1
|
28818 <Hit_num>1</Hit_num>
|
jpayne@1
|
28819 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28820 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28821 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28822 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28823 <Hit_hsps>
|
jpayne@1
|
28824 <Hsp>
|
jpayne@1
|
28825 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28826 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
28827 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
28828 <Hsp_evalue>1.44323e-131</Hsp_evalue>
|
jpayne@1
|
28829 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28830 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28831 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28832 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28833 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28834 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28835 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
28836 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
28837 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28838 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28839 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGTTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATACAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28840 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28841 <Hsp_midline>||||||||||| || || || ||||| |||||| || ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| || ||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
28842 </Hsp>
|
jpayne@1
|
28843 </Hit_hsps>
|
jpayne@1
|
28844 </Hit>
|
jpayne@1
|
28845 </Iteration_hits>
|
jpayne@1
|
28846 <Iteration_stat>
|
jpayne@1
|
28847 <Statistics>
|
jpayne@1
|
28848 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28849 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28850 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28851 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28852 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28853 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28854 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28855 </Statistics>
|
jpayne@1
|
28856 </Iteration_stat>
|
jpayne@1
|
28857 </Iteration>
|
jpayne@1
|
28858 <Iteration>
|
jpayne@1
|
28859 <Iteration_iter-num>555</Iteration_iter-num>
|
jpayne@1
|
28860 <Iteration_query-ID>Query_555</Iteration_query-ID>
|
jpayne@1
|
28861 <Iteration_query-def>fljB_1,5_Salmonella.enterica_Infantis_AY353282_1__1521</Iteration_query-def>
|
jpayne@1
|
28862 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28863 <Iteration_hits>
|
jpayne@1
|
28864 <Hit>
|
jpayne@1
|
28865 <Hit_num>1</Hit_num>
|
jpayne@1
|
28866 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28867 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28868 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28869 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28870 <Hit_hsps>
|
jpayne@1
|
28871 <Hsp>
|
jpayne@1
|
28872 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28873 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
28874 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
28875 <Hsp_evalue>6.71469e-130</Hsp_evalue>
|
jpayne@1
|
28876 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28877 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28878 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28879 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28880 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28881 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28882 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
28883 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
28884 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28885 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28886 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28887 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28888 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28889 </Hsp>
|
jpayne@1
|
28890 </Hit_hsps>
|
jpayne@1
|
28891 </Hit>
|
jpayne@1
|
28892 </Iteration_hits>
|
jpayne@1
|
28893 <Iteration_stat>
|
jpayne@1
|
28894 <Statistics>
|
jpayne@1
|
28895 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28896 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28897 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28898 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28899 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28900 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28901 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28902 </Statistics>
|
jpayne@1
|
28903 </Iteration_stat>
|
jpayne@1
|
28904 </Iteration>
|
jpayne@1
|
28905 <Iteration>
|
jpayne@1
|
28906 <Iteration_iter-num>556</Iteration_iter-num>
|
jpayne@1
|
28907 <Iteration_query-ID>Query_556</Iteration_query-ID>
|
jpayne@1
|
28908 <Iteration_query-def>fljB_1,5_Salmonella.enterica_Bovismorbificans_AY353283_1__1521</Iteration_query-def>
|
jpayne@1
|
28909 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28910 <Iteration_hits>
|
jpayne@1
|
28911 <Hit>
|
jpayne@1
|
28912 <Hit_num>1</Hit_num>
|
jpayne@1
|
28913 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28914 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28915 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28916 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28917 <Hit_hsps>
|
jpayne@1
|
28918 <Hsp>
|
jpayne@1
|
28919 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28920 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
28921 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
28922 <Hsp_evalue>1.44323e-131</Hsp_evalue>
|
jpayne@1
|
28923 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28924 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28925 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28926 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28927 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28928 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28929 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
28930 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
28931 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28932 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28933 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAAACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28934 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28935 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28936 </Hsp>
|
jpayne@1
|
28937 </Hit_hsps>
|
jpayne@1
|
28938 </Hit>
|
jpayne@1
|
28939 </Iteration_hits>
|
jpayne@1
|
28940 <Iteration_stat>
|
jpayne@1
|
28941 <Statistics>
|
jpayne@1
|
28942 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28943 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28944 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28945 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28946 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28947 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28948 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28949 </Statistics>
|
jpayne@1
|
28950 </Iteration_stat>
|
jpayne@1
|
28951 </Iteration>
|
jpayne@1
|
28952 <Iteration>
|
jpayne@1
|
28953 <Iteration_iter-num>557</Iteration_iter-num>
|
jpayne@1
|
28954 <Iteration_query-ID>Query_557</Iteration_query-ID>
|
jpayne@1
|
28955 <Iteration_query-def>fljB_1,5_Salmonella.enterica_I.43:e,h:1,5_AY353284_1__1521</Iteration_query-def>
|
jpayne@1
|
28956 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
28957 <Iteration_hits>
|
jpayne@1
|
28958 <Hit>
|
jpayne@1
|
28959 <Hit_num>1</Hit_num>
|
jpayne@1
|
28960 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
28961 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
28962 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
28963 <Hit_len>1962</Hit_len>
|
jpayne@1
|
28964 <Hit_hsps>
|
jpayne@1
|
28965 <Hsp>
|
jpayne@1
|
28966 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
28967 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
28968 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
28969 <Hsp_evalue>6.71469e-130</Hsp_evalue>
|
jpayne@1
|
28970 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
28971 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
28972 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
28973 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
28974 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
28975 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
28976 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
28977 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
28978 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
28979 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
28980 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAATGACGGTATTTCTATTGCGCAAACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACTCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
28981 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
28982 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
28983 </Hsp>
|
jpayne@1
|
28984 </Hit_hsps>
|
jpayne@1
|
28985 </Hit>
|
jpayne@1
|
28986 </Iteration_hits>
|
jpayne@1
|
28987 <Iteration_stat>
|
jpayne@1
|
28988 <Statistics>
|
jpayne@1
|
28989 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
28990 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
28991 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
28992 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
28993 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
28994 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
28995 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
28996 </Statistics>
|
jpayne@1
|
28997 </Iteration_stat>
|
jpayne@1
|
28998 </Iteration>
|
jpayne@1
|
28999 <Iteration>
|
jpayne@1
|
29000 <Iteration_iter-num>558</Iteration_iter-num>
|
jpayne@1
|
29001 <Iteration_query-ID>Query_558</Iteration_query-ID>
|
jpayne@1
|
29002 <Iteration_query-def>fljB_1,5_Salmonella.enterica_Thompson_AY353285_1__1521</Iteration_query-def>
|
jpayne@1
|
29003 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29004 <Iteration_hits>
|
jpayne@1
|
29005 <Hit>
|
jpayne@1
|
29006 <Hit_num>1</Hit_num>
|
jpayne@1
|
29007 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29008 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29009 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29010 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29011 <Hit_hsps>
|
jpayne@1
|
29012 <Hsp>
|
jpayne@1
|
29013 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29014 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
29015 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
29016 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
29017 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29018 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29019 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29020 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29021 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29022 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29023 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
29024 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
29025 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29026 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29027 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29028 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29029 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29030 </Hsp>
|
jpayne@1
|
29031 </Hit_hsps>
|
jpayne@1
|
29032 </Hit>
|
jpayne@1
|
29033 </Iteration_hits>
|
jpayne@1
|
29034 <Iteration_stat>
|
jpayne@1
|
29035 <Statistics>
|
jpayne@1
|
29036 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29037 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29038 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29039 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29040 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29041 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29042 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29043 </Statistics>
|
jpayne@1
|
29044 </Iteration_stat>
|
jpayne@1
|
29045 </Iteration>
|
jpayne@1
|
29046 <Iteration>
|
jpayne@1
|
29047 <Iteration_iter-num>559</Iteration_iter-num>
|
jpayne@1
|
29048 <Iteration_query-ID>Query_559</Iteration_query-ID>
|
jpayne@1
|
29049 <Iteration_query-def>fljB_1,5_Salmonella.enterica_Thompson_AY353286_1__1521</Iteration_query-def>
|
jpayne@1
|
29050 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29051 <Iteration_hits>
|
jpayne@1
|
29052 <Hit>
|
jpayne@1
|
29053 <Hit_num>1</Hit_num>
|
jpayne@1
|
29054 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29055 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29056 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29057 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29058 <Hit_hsps>
|
jpayne@1
|
29059 <Hsp>
|
jpayne@1
|
29060 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29061 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
29062 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
29063 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
29064 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29065 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29066 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29067 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29068 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29069 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29070 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
29071 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
29072 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29073 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29074 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29075 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29076 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29077 </Hsp>
|
jpayne@1
|
29078 </Hit_hsps>
|
jpayne@1
|
29079 </Hit>
|
jpayne@1
|
29080 </Iteration_hits>
|
jpayne@1
|
29081 <Iteration_stat>
|
jpayne@1
|
29082 <Statistics>
|
jpayne@1
|
29083 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29084 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29085 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29086 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29087 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29088 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29089 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29090 </Statistics>
|
jpayne@1
|
29091 </Iteration_stat>
|
jpayne@1
|
29092 </Iteration>
|
jpayne@1
|
29093 <Iteration>
|
jpayne@1
|
29094 <Iteration_iter-num>560</Iteration_iter-num>
|
jpayne@1
|
29095 <Iteration_query-ID>Query_560</Iteration_query-ID>
|
jpayne@1
|
29096 <Iteration_query-def>fljB_1,5_Salmonella.enterica_Thompson_AY353287_1__1521</Iteration_query-def>
|
jpayne@1
|
29097 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29098 <Iteration_hits>
|
jpayne@1
|
29099 <Hit>
|
jpayne@1
|
29100 <Hit_num>1</Hit_num>
|
jpayne@1
|
29101 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29102 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29103 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29104 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29105 <Hit_hsps>
|
jpayne@1
|
29106 <Hsp>
|
jpayne@1
|
29107 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29108 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
29109 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
29110 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
29111 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29112 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29113 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29114 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29115 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29116 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29117 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
29118 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
29119 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29120 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29121 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29122 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29123 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29124 </Hsp>
|
jpayne@1
|
29125 </Hit_hsps>
|
jpayne@1
|
29126 </Hit>
|
jpayne@1
|
29127 </Iteration_hits>
|
jpayne@1
|
29128 <Iteration_stat>
|
jpayne@1
|
29129 <Statistics>
|
jpayne@1
|
29130 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29131 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29132 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29133 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29134 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29135 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29136 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29137 </Statistics>
|
jpayne@1
|
29138 </Iteration_stat>
|
jpayne@1
|
29139 </Iteration>
|
jpayne@1
|
29140 <Iteration>
|
jpayne@1
|
29141 <Iteration_iter-num>561</Iteration_iter-num>
|
jpayne@1
|
29142 <Iteration_query-ID>Query_561</Iteration_query-ID>
|
jpayne@1
|
29143 <Iteration_query-def>fljB_1,5_Muensterstr_AOYX01000059_1__1511</Iteration_query-def>
|
jpayne@1
|
29144 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
29145 <Iteration_hits>
|
jpayne@1
|
29146 <Hit>
|
jpayne@1
|
29147 <Hit_num>1</Hit_num>
|
jpayne@1
|
29148 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29149 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29150 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29151 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29152 <Hit_hsps>
|
jpayne@1
|
29153 <Hsp>
|
jpayne@1
|
29154 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29155 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
29156 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
29157 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
29158 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29159 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29160 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29161 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29162 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29163 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29164 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
29165 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
29166 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29167 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29168 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29169 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29170 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29171 </Hsp>
|
jpayne@1
|
29172 </Hit_hsps>
|
jpayne@1
|
29173 </Hit>
|
jpayne@1
|
29174 </Iteration_hits>
|
jpayne@1
|
29175 <Iteration_stat>
|
jpayne@1
|
29176 <Statistics>
|
jpayne@1
|
29177 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29178 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29179 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29180 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
29181 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29182 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29183 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29184 </Statistics>
|
jpayne@1
|
29185 </Iteration_stat>
|
jpayne@1
|
29186 </Iteration>
|
jpayne@1
|
29187 <Iteration>
|
jpayne@1
|
29188 <Iteration_iter-num>562</Iteration_iter-num>
|
jpayne@1
|
29189 <Iteration_query-ID>Query_562</Iteration_query-ID>
|
jpayne@1
|
29190 <Iteration_query-def>fljB_1,5_Muensterstr_AOYW01000030_1__1511</Iteration_query-def>
|
jpayne@1
|
29191 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
29192 <Iteration_hits>
|
jpayne@1
|
29193 <Hit>
|
jpayne@1
|
29194 <Hit_num>1</Hit_num>
|
jpayne@1
|
29195 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29196 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29197 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29198 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29199 <Hit_hsps>
|
jpayne@1
|
29200 <Hsp>
|
jpayne@1
|
29201 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29202 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
29203 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
29204 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
29205 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29206 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29207 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29208 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29209 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29210 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29211 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
29212 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
29213 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29214 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29215 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29216 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29217 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29218 </Hsp>
|
jpayne@1
|
29219 </Hit_hsps>
|
jpayne@1
|
29220 </Hit>
|
jpayne@1
|
29221 </Iteration_hits>
|
jpayne@1
|
29222 <Iteration_stat>
|
jpayne@1
|
29223 <Statistics>
|
jpayne@1
|
29224 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29225 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29226 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29227 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
29228 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29229 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29230 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29231 </Statistics>
|
jpayne@1
|
29232 </Iteration_stat>
|
jpayne@1
|
29233 </Iteration>
|
jpayne@1
|
29234 <Iteration>
|
jpayne@1
|
29235 <Iteration_iter-num>563</Iteration_iter-num>
|
jpayne@1
|
29236 <Iteration_query-ID>Query_563</Iteration_query-ID>
|
jpayne@1
|
29237 <Iteration_query-def>fljB_1,5_Choleraesuis_CP007639_1__1521</Iteration_query-def>
|
jpayne@1
|
29238 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29239 <Iteration_hits>
|
jpayne@1
|
29240 <Hit>
|
jpayne@1
|
29241 <Hit_num>1</Hit_num>
|
jpayne@1
|
29242 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29243 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29244 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29245 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29246 <Hit_hsps>
|
jpayne@1
|
29247 <Hsp>
|
jpayne@1
|
29248 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29249 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
29250 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
29251 <Hsp_evalue>1.43305e-136</Hsp_evalue>
|
jpayne@1
|
29252 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29253 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29254 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29255 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29256 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29257 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29258 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
29259 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
29260 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29261 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29262 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCACAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29263 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29264 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29265 </Hsp>
|
jpayne@1
|
29266 </Hit_hsps>
|
jpayne@1
|
29267 </Hit>
|
jpayne@1
|
29268 </Iteration_hits>
|
jpayne@1
|
29269 <Iteration_stat>
|
jpayne@1
|
29270 <Statistics>
|
jpayne@1
|
29271 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29272 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29273 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29274 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29275 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29276 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29277 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29278 </Statistics>
|
jpayne@1
|
29279 </Iteration_stat>
|
jpayne@1
|
29280 </Iteration>
|
jpayne@1
|
29281 <Iteration>
|
jpayne@1
|
29282 <Iteration_iter-num>564</Iteration_iter-num>
|
jpayne@1
|
29283 <Iteration_query-ID>Query_564</Iteration_query-ID>
|
jpayne@1
|
29284 <Iteration_query-def>fljB_1,5_Javiana_SAMN02902435_1__1511</Iteration_query-def>
|
jpayne@1
|
29285 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
29286 <Iteration_hits>
|
jpayne@1
|
29287 <Hit>
|
jpayne@1
|
29288 <Hit_num>1</Hit_num>
|
jpayne@1
|
29289 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29290 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29291 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29292 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29293 <Hit_hsps>
|
jpayne@1
|
29294 <Hsp>
|
jpayne@1
|
29295 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29296 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
29297 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
29298 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
29299 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29300 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29301 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29302 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29303 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29304 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29305 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
29306 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
29307 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29308 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29309 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29310 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29311 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29312 </Hsp>
|
jpayne@1
|
29313 </Hit_hsps>
|
jpayne@1
|
29314 </Hit>
|
jpayne@1
|
29315 </Iteration_hits>
|
jpayne@1
|
29316 <Iteration_stat>
|
jpayne@1
|
29317 <Statistics>
|
jpayne@1
|
29318 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29319 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29320 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29321 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
29322 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29323 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29324 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29325 </Statistics>
|
jpayne@1
|
29326 </Iteration_stat>
|
jpayne@1
|
29327 </Iteration>
|
jpayne@1
|
29328 <Iteration>
|
jpayne@1
|
29329 <Iteration_iter-num>565</Iteration_iter-num>
|
jpayne@1
|
29330 <Iteration_query-ID>Query_565</Iteration_query-ID>
|
jpayne@1
|
29331 <Iteration_query-def>fljB_1,5_Muenster_DTU-unknown(tail&head may be fliC due to extract by mapping)_1__1521</Iteration_query-def>
|
jpayne@1
|
29332 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29333 <Iteration_hits>
|
jpayne@1
|
29334 <Hit>
|
jpayne@1
|
29335 <Hit_num>1</Hit_num>
|
jpayne@1
|
29336 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29337 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29338 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29339 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29340 <Hit_hsps>
|
jpayne@1
|
29341 <Hsp>
|
jpayne@1
|
29342 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29343 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
29344 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
29345 <Hsp_evalue>1.43305e-136</Hsp_evalue>
|
jpayne@1
|
29346 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29347 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29348 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29349 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29350 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29351 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29352 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
29353 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
29354 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29355 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29356 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29357 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29358 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29359 </Hsp>
|
jpayne@1
|
29360 <Hsp>
|
jpayne@1
|
29361 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
29362 <Hsp_bit-score>217.178</Hsp_bit-score>
|
jpayne@1
|
29363 <Hsp_score>117</Hsp_score>
|
jpayne@1
|
29364 <Hsp_evalue>3.4493e-58</Hsp_evalue>
|
jpayne@1
|
29365 <Hsp_query-from>1324</Hsp_query-from>
|
jpayne@1
|
29366 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
29367 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
29368 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
29369 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29370 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29371 <Hsp_identity>172</Hsp_identity>
|
jpayne@1
|
29372 <Hsp_positive>172</Hsp_positive>
|
jpayne@1
|
29373 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29374 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
29375 <Hsp_qseq>AACCGTTTTAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
29376 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
29377 <Hsp_midline>||||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
29378 </Hsp>
|
jpayne@1
|
29379 </Hit_hsps>
|
jpayne@1
|
29380 </Hit>
|
jpayne@1
|
29381 </Iteration_hits>
|
jpayne@1
|
29382 <Iteration_stat>
|
jpayne@1
|
29383 <Statistics>
|
jpayne@1
|
29384 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29385 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29386 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29387 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29388 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29389 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29390 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29391 </Statistics>
|
jpayne@1
|
29392 </Iteration_stat>
|
jpayne@1
|
29393 </Iteration>
|
jpayne@1
|
29394 <Iteration>
|
jpayne@1
|
29395 <Iteration_iter-num>566</Iteration_iter-num>
|
jpayne@1
|
29396 <Iteration_query-ID>Query_566</Iteration_query-ID>
|
jpayne@1
|
29397 <Iteration_query-def>fljB_1,5,7_Salmonella.enterica_Hisingen_AY353289_1__1521</Iteration_query-def>
|
jpayne@1
|
29398 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29399 <Iteration_hits>
|
jpayne@1
|
29400 <Hit>
|
jpayne@1
|
29401 <Hit_num>1</Hit_num>
|
jpayne@1
|
29402 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29403 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29404 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29405 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29406 <Hit_hsps>
|
jpayne@1
|
29407 <Hsp>
|
jpayne@1
|
29408 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29409 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
29410 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
29411 <Hsp_evalue>1.44323e-131</Hsp_evalue>
|
jpayne@1
|
29412 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29413 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29414 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29415 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29416 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29417 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29418 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
29419 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
29420 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29421 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29422 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGCCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCCAACATAAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGATGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCTGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29423 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29424 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || || ||||||||||||||||||||||||||||||||||| || |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || ||| ||||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| ||| |||||||||</Hsp_midline>
|
jpayne@1
|
29425 </Hsp>
|
jpayne@1
|
29426 </Hit_hsps>
|
jpayne@1
|
29427 </Hit>
|
jpayne@1
|
29428 </Iteration_hits>
|
jpayne@1
|
29429 <Iteration_stat>
|
jpayne@1
|
29430 <Statistics>
|
jpayne@1
|
29431 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29432 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29433 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29434 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29435 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29436 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29437 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29438 </Statistics>
|
jpayne@1
|
29439 </Iteration_stat>
|
jpayne@1
|
29440 </Iteration>
|
jpayne@1
|
29441 <Iteration>
|
jpayne@1
|
29442 <Iteration_iter-num>567</Iteration_iter-num>
|
jpayne@1
|
29443 <Iteration_query-ID>Query_567</Iteration_query-ID>
|
jpayne@1
|
29444 <Iteration_query-def>fljB_1,5,7_Salmonella.enterica_IIIb.48:l,v:1,5,7_AY353290_1__1521</Iteration_query-def>
|
jpayne@1
|
29445 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29446 <Iteration_hits>
|
jpayne@1
|
29447 <Hit>
|
jpayne@1
|
29448 <Hit_num>1</Hit_num>
|
jpayne@1
|
29449 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29450 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29451 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29452 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29453 <Hit_hsps>
|
jpayne@1
|
29454 <Hsp>
|
jpayne@1
|
29455 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29456 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
29457 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
29458 <Hsp_evalue>3.10202e-133</Hsp_evalue>
|
jpayne@1
|
29459 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29460 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29461 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29462 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29463 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29464 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29465 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
29466 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
29467 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29468 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29469 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGTTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29470 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29471 <Hsp_midline>||||||||||| || || || ||||| |||||| || ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
29472 </Hsp>
|
jpayne@1
|
29473 </Hit_hsps>
|
jpayne@1
|
29474 </Hit>
|
jpayne@1
|
29475 </Iteration_hits>
|
jpayne@1
|
29476 <Iteration_stat>
|
jpayne@1
|
29477 <Statistics>
|
jpayne@1
|
29478 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29479 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29480 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29481 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29482 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29483 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29484 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29485 </Statistics>
|
jpayne@1
|
29486 </Iteration_stat>
|
jpayne@1
|
29487 </Iteration>
|
jpayne@1
|
29488 <Iteration>
|
jpayne@1
|
29489 <Iteration_iter-num>568</Iteration_iter-num>
|
jpayne@1
|
29490 <Iteration_query-ID>Query_568</Iteration_query-ID>
|
jpayne@1
|
29491 <Iteration_query-def>fljB_1,5,7_Salmonella.enterica_IIIb.47:r:1,5,7_AY353291_1__1521</Iteration_query-def>
|
jpayne@1
|
29492 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29493 <Iteration_hits>
|
jpayne@1
|
29494 <Hit>
|
jpayne@1
|
29495 <Hit_num>1</Hit_num>
|
jpayne@1
|
29496 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29497 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29498 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29499 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29500 <Hit_hsps>
|
jpayne@1
|
29501 <Hsp>
|
jpayne@1
|
29502 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29503 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
29504 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
29505 <Hsp_evalue>3.10202e-133</Hsp_evalue>
|
jpayne@1
|
29506 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29507 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29508 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29509 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29510 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29511 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29512 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
29513 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
29514 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29515 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29516 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTTTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29517 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29518 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | ||| || | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
29519 </Hsp>
|
jpayne@1
|
29520 </Hit_hsps>
|
jpayne@1
|
29521 </Hit>
|
jpayne@1
|
29522 </Iteration_hits>
|
jpayne@1
|
29523 <Iteration_stat>
|
jpayne@1
|
29524 <Statistics>
|
jpayne@1
|
29525 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29526 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29527 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29528 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29529 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29530 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29531 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29532 </Statistics>
|
jpayne@1
|
29533 </Iteration_stat>
|
jpayne@1
|
29534 </Iteration>
|
jpayne@1
|
29535 <Iteration>
|
jpayne@1
|
29536 <Iteration_iter-num>569</Iteration_iter-num>
|
jpayne@1
|
29537 <Iteration_query-ID>Query_569</Iteration_query-ID>
|
jpayne@1
|
29538 <Iteration_query-def>fljB_1,6_Salmonella.enterica_Agama_AY353294_1__1521</Iteration_query-def>
|
jpayne@1
|
29539 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29540 <Iteration_hits>
|
jpayne@1
|
29541 <Hit>
|
jpayne@1
|
29542 <Hit_num>1</Hit_num>
|
jpayne@1
|
29543 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29544 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29545 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29546 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29547 <Hit_hsps>
|
jpayne@1
|
29548 <Hsp>
|
jpayne@1
|
29549 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29550 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
29551 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
29552 <Hsp_evalue>3.10202e-133</Hsp_evalue>
|
jpayne@1
|
29553 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29554 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29555 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29556 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29557 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29558 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29559 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
29560 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
29561 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
29562 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
29563 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29564 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29565 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29566 </Hsp>
|
jpayne@1
|
29567 </Hit_hsps>
|
jpayne@1
|
29568 </Hit>
|
jpayne@1
|
29569 </Iteration_hits>
|
jpayne@1
|
29570 <Iteration_stat>
|
jpayne@1
|
29571 <Statistics>
|
jpayne@1
|
29572 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29573 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29574 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29575 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29576 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29577 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29578 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29579 </Statistics>
|
jpayne@1
|
29580 </Iteration_stat>
|
jpayne@1
|
29581 </Iteration>
|
jpayne@1
|
29582 <Iteration>
|
jpayne@1
|
29583 <Iteration_iter-num>570</Iteration_iter-num>
|
jpayne@1
|
29584 <Iteration_query-ID>Query_570</Iteration_query-ID>
|
jpayne@1
|
29585 <Iteration_query-def>fljB_1,6_Salmonella.enterica_Poona_AY353295_1__1521</Iteration_query-def>
|
jpayne@1
|
29586 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29587 <Iteration_hits>
|
jpayne@1
|
29588 <Hit>
|
jpayne@1
|
29589 <Hit_num>1</Hit_num>
|
jpayne@1
|
29590 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29591 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29592 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29593 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29594 <Hit_hsps>
|
jpayne@1
|
29595 <Hsp>
|
jpayne@1
|
29596 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29597 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
29598 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
29599 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
29600 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29601 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29602 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29603 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29604 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29605 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29606 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
29607 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
29608 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29609 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29610 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCGCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29611 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29612 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29613 </Hsp>
|
jpayne@1
|
29614 </Hit_hsps>
|
jpayne@1
|
29615 </Hit>
|
jpayne@1
|
29616 </Iteration_hits>
|
jpayne@1
|
29617 <Iteration_stat>
|
jpayne@1
|
29618 <Statistics>
|
jpayne@1
|
29619 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29620 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29621 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29622 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29623 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29624 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29625 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29626 </Statistics>
|
jpayne@1
|
29627 </Iteration_stat>
|
jpayne@1
|
29628 </Iteration>
|
jpayne@1
|
29629 <Iteration>
|
jpayne@1
|
29630 <Iteration_iter-num>571</Iteration_iter-num>
|
jpayne@1
|
29631 <Iteration_query-ID>Query_571</Iteration_query-ID>
|
jpayne@1
|
29632 <Iteration_query-def>fljB_1,7_Salmonella.enterica_Bredeney_AY353296_1__1521</Iteration_query-def>
|
jpayne@1
|
29633 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29634 <Iteration_hits>
|
jpayne@1
|
29635 <Hit>
|
jpayne@1
|
29636 <Hit_num>1</Hit_num>
|
jpayne@1
|
29637 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29638 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29639 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29640 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29641 <Hit_hsps>
|
jpayne@1
|
29642 <Hsp>
|
jpayne@1
|
29643 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29644 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
29645 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
29646 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
29647 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29648 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29649 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29650 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29651 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29652 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29653 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
29654 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
29655 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29656 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29657 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCCTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGATGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29658 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29659 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || |||||||||||||||||||| |||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| |||||||||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29660 </Hsp>
|
jpayne@1
|
29661 </Hit_hsps>
|
jpayne@1
|
29662 </Hit>
|
jpayne@1
|
29663 </Iteration_hits>
|
jpayne@1
|
29664 <Iteration_stat>
|
jpayne@1
|
29665 <Statistics>
|
jpayne@1
|
29666 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29667 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29668 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29669 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29670 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29671 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29672 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29673 </Statistics>
|
jpayne@1
|
29674 </Iteration_stat>
|
jpayne@1
|
29675 </Iteration>
|
jpayne@1
|
29676 <Iteration>
|
jpayne@1
|
29677 <Iteration_iter-num>572</Iteration_iter-num>
|
jpayne@1
|
29678 <Iteration_query-ID>Query_572</Iteration_query-ID>
|
jpayne@1
|
29679 <Iteration_query-def>fljB_1,7_Salmonella.enterica_Nola_AY353298_1__1521</Iteration_query-def>
|
jpayne@1
|
29680 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29681 <Iteration_hits>
|
jpayne@1
|
29682 <Hit>
|
jpayne@1
|
29683 <Hit_num>1</Hit_num>
|
jpayne@1
|
29684 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29685 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29686 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29687 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29688 <Hit_hsps>
|
jpayne@1
|
29689 <Hsp>
|
jpayne@1
|
29690 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29691 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
29692 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
29693 <Hsp_evalue>6.71469e-130</Hsp_evalue>
|
jpayne@1
|
29694 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29695 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29696 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29697 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29698 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29699 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29700 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
29701 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
29702 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29703 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29704 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAAACTACTGAAGGTGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29705 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29706 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || || |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29707 </Hsp>
|
jpayne@1
|
29708 <Hsp>
|
jpayne@1
|
29709 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
29710 <Hsp_bit-score>167.319</Hsp_bit-score>
|
jpayne@1
|
29711 <Hsp_score>90</Hsp_score>
|
jpayne@1
|
29712 <Hsp_evalue>3.52329e-43</Hsp_evalue>
|
jpayne@1
|
29713 <Hsp_query-from>1324</Hsp_query-from>
|
jpayne@1
|
29714 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
29715 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
29716 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
29717 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29718 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29719 <Hsp_identity>163</Hsp_identity>
|
jpayne@1
|
29720 <Hsp_positive>163</Hsp_positive>
|
jpayne@1
|
29721 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29722 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
29723 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTCCCGCAGAACGTGCTGTCTCTGTTACGTTAA</Hsp_qseq>
|
jpayne@1
|
29724 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
29725 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || ||| | | ||||||</Hsp_midline>
|
jpayne@1
|
29726 </Hsp>
|
jpayne@1
|
29727 </Hit_hsps>
|
jpayne@1
|
29728 </Hit>
|
jpayne@1
|
29729 </Iteration_hits>
|
jpayne@1
|
29730 <Iteration_stat>
|
jpayne@1
|
29731 <Statistics>
|
jpayne@1
|
29732 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29733 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29734 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29735 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29736 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29737 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29738 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29739 </Statistics>
|
jpayne@1
|
29740 </Iteration_stat>
|
jpayne@1
|
29741 </Iteration>
|
jpayne@1
|
29742 <Iteration>
|
jpayne@1
|
29743 <Iteration_iter-num>573</Iteration_iter-num>
|
jpayne@1
|
29744 <Iteration_query-ID>Query_573</Iteration_query-ID>
|
jpayne@1
|
29745 <Iteration_query-def>fljB_1,7_Salmonella.enterica_Pomona_AY353299_1__1521</Iteration_query-def>
|
jpayne@1
|
29746 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29747 <Iteration_hits>
|
jpayne@1
|
29748 <Hit>
|
jpayne@1
|
29749 <Hit_num>1</Hit_num>
|
jpayne@1
|
29750 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29751 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29752 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29753 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29754 <Hit_hsps>
|
jpayne@1
|
29755 <Hsp>
|
jpayne@1
|
29756 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29757 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
29758 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
29759 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
29760 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29761 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29762 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29763 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29764 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29765 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29766 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
29767 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
29768 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29769 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29770 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCGCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29771 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29772 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29773 </Hsp>
|
jpayne@1
|
29774 </Hit_hsps>
|
jpayne@1
|
29775 </Hit>
|
jpayne@1
|
29776 </Iteration_hits>
|
jpayne@1
|
29777 <Iteration_stat>
|
jpayne@1
|
29778 <Statistics>
|
jpayne@1
|
29779 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29780 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29781 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29782 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29783 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29784 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29785 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29786 </Statistics>
|
jpayne@1
|
29787 </Iteration_stat>
|
jpayne@1
|
29788 </Iteration>
|
jpayne@1
|
29789 <Iteration>
|
jpayne@1
|
29790 <Iteration_iter-num>574</Iteration_iter-num>
|
jpayne@1
|
29791 <Iteration_query-ID>Query_574</Iteration_query-ID>
|
jpayne@1
|
29792 <Iteration_query-def>fljB_1,7_Salmonella.enterica_from-cdc_Stk1415_1__1521</Iteration_query-def>
|
jpayne@1
|
29793 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29794 <Iteration_hits>
|
jpayne@1
|
29795 <Hit>
|
jpayne@1
|
29796 <Hit_num>1</Hit_num>
|
jpayne@1
|
29797 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29798 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29799 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29800 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29801 <Hit_hsps>
|
jpayne@1
|
29802 <Hsp>
|
jpayne@1
|
29803 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29804 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
29805 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
29806 <Hsp_evalue>3.14622e-123</Hsp_evalue>
|
jpayne@1
|
29807 <Hsp_query-from>1042</Hsp_query-from>
|
jpayne@1
|
29808 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
29809 <Hsp_hit-from>1264</Hsp_hit-from>
|
jpayne@1
|
29810 <Hsp_hit-to>1743</Hsp_hit-to>
|
jpayne@1
|
29811 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29812 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
29813 <Hsp_identity>399</Hsp_identity>
|
jpayne@1
|
29814 <Hsp_positive>399</Hsp_positive>
|
jpayne@1
|
29815 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29816 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29817 <Hsp_qseq>CAGATCGATGTCGATAGTTTCACCGTCATTGGCGCCAACCTGGATGGTCAGGGTGTTGTCCTGCGCCAGGACTTTCACGCCGTTGAACTGGGTCTGGCCGGATACACGGTCGATTTCGTTCAGACGCTGGGTG-ATTTCAGCCTGGATGGAGTCGAGGTCAGACTGGGAGTTGGTGCTGTTAGCAGACTGAACTGCCAGTTCACGCACGCGCTGCAGGTTGTTGTTGATTTCGTTCAGCGCGCCTTCAGTGGTCTGCGCAATAGAAATACCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTAATGTTCGCGGTGAAACGGTTAGCAATCGCCTGACCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAAGACAGACGCTCGATAGCGGTGCCCAGAGCAGACTGGGATTTGTTCAGGTTATTCTGAGTCAGCAGCGACAGACTGTTAGTGTTGATTACTTGTGCCAT</Hsp_qseq>
|
jpayne@1
|
29818 <Hsp_hseq>CAGATCGATGGTAATGGTTTCACCATCGTTAGCACCAACCTGGATTTTCATCTGGTTGTCCTGAGACAGGACTTTAACACCGTTAAATTGAGTCTGATTAGAAACGCGATCGATTTCTTCCAGACG-TTGCTGAATTTCATCCTGGATAGATTTCAGATCGGAATCAGAGTTAGTCCCGTTAGTGGCCTGAACAGACAACTCACGCACACGCTGCAGGTTGTTGTTAATTTCATTCAGCGCACCTTCAGTGGTCTGCGCAATAGAAATGCCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTGATATTAGAAGTGAAGCGGTTAGCAATCGCCTGGCCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAGGACAGACGCTCAATAGCGGAACTCAGTGAGGACTGAGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_hseq>
|
jpayne@1
|
29819 <Hsp_midline>|||||||||| || |||||||| || || || ||||||||||| ||| ||||||||| | ||||||||| || ||||| || || ||||| || || || |||||||| | |||||| | | || |||||| ||||||| || | || || || | ||||| || | ||||| | |||||| | || |||||||| ||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || || | ||||| ||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| | ||| | ||||| |||||||||||||||||||| |||| ||||||||| ||||| || || || |||||||||||</Hsp_midline>
|
jpayne@1
|
29820 </Hsp>
|
jpayne@1
|
29821 </Hit_hsps>
|
jpayne@1
|
29822 </Hit>
|
jpayne@1
|
29823 </Iteration_hits>
|
jpayne@1
|
29824 <Iteration_stat>
|
jpayne@1
|
29825 <Statistics>
|
jpayne@1
|
29826 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29827 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29828 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29829 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29830 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29831 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29832 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29833 </Statistics>
|
jpayne@1
|
29834 </Iteration_stat>
|
jpayne@1
|
29835 </Iteration>
|
jpayne@1
|
29836 <Iteration>
|
jpayne@1
|
29837 <Iteration_iter-num>575</Iteration_iter-num>
|
jpayne@1
|
29838 <Iteration_query-ID>Query_575</Iteration_query-ID>
|
jpayne@1
|
29839 <Iteration_query-def>fljB_1,7_Salmonella.enterica_Give_AY353300_1__1521</Iteration_query-def>
|
jpayne@1
|
29840 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
29841 <Iteration_hits>
|
jpayne@1
|
29842 <Hit>
|
jpayne@1
|
29843 <Hit_num>1</Hit_num>
|
jpayne@1
|
29844 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29845 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29846 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29847 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29848 <Hit_hsps>
|
jpayne@1
|
29849 <Hsp>
|
jpayne@1
|
29850 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29851 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
29852 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
29853 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
29854 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29855 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29856 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29857 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29858 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29859 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29860 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
29861 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
29862 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29863 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29864 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCCTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGATGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29865 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29866 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || |||||||||||||||||||| |||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| |||||||||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29867 </Hsp>
|
jpayne@1
|
29868 </Hit_hsps>
|
jpayne@1
|
29869 </Hit>
|
jpayne@1
|
29870 </Iteration_hits>
|
jpayne@1
|
29871 <Iteration_stat>
|
jpayne@1
|
29872 <Statistics>
|
jpayne@1
|
29873 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29874 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29875 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29876 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
29877 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29878 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29879 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29880 </Statistics>
|
jpayne@1
|
29881 </Iteration_stat>
|
jpayne@1
|
29882 </Iteration>
|
jpayne@1
|
29883 <Iteration>
|
jpayne@1
|
29884 <Iteration_iter-num>576</Iteration_iter-num>
|
jpayne@1
|
29885 <Iteration_query-ID>Query_576</Iteration_query-ID>
|
jpayne@1
|
29886 <Iteration_query-def>fljB_e,n,z15_Salmonella.enterica_Sandiego.var.d+_AY353303_e__1506</Iteration_query-def>
|
jpayne@1
|
29887 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
29888 <Iteration_hits>
|
jpayne@1
|
29889 <Hit>
|
jpayne@1
|
29890 <Hit_num>1</Hit_num>
|
jpayne@1
|
29891 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29892 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29893 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29894 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29895 <Hit_hsps>
|
jpayne@1
|
29896 <Hsp>
|
jpayne@1
|
29897 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29898 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
29899 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
29900 <Hsp_evalue>1.42883e-131</Hsp_evalue>
|
jpayne@1
|
29901 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29902 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
29903 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29904 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
29905 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29906 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29907 <Hsp_identity>396</Hsp_identity>
|
jpayne@1
|
29908 <Hsp_positive>396</Hsp_positive>
|
jpayne@1
|
29909 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29910 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
29911 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATTAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAATGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
29912 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
29913 <Hsp_midline>||||||||||| || || || ||||| ||||||||||||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| |||||||||||||| |||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||| ||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
29914 </Hsp>
|
jpayne@1
|
29915 </Hit_hsps>
|
jpayne@1
|
29916 </Hit>
|
jpayne@1
|
29917 </Iteration_hits>
|
jpayne@1
|
29918 <Iteration_stat>
|
jpayne@1
|
29919 <Statistics>
|
jpayne@1
|
29920 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29921 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29922 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29923 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
29924 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29925 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29926 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29927 </Statistics>
|
jpayne@1
|
29928 </Iteration_stat>
|
jpayne@1
|
29929 </Iteration>
|
jpayne@1
|
29930 <Iteration>
|
jpayne@1
|
29931 <Iteration_iter-num>577</Iteration_iter-num>
|
jpayne@1
|
29932 <Iteration_query-ID>Query_577</Iteration_query-ID>
|
jpayne@1
|
29933 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_Singapore_AY353305_e__1506</Iteration_query-def>
|
jpayne@1
|
29934 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
29935 <Iteration_hits>
|
jpayne@1
|
29936 <Hit>
|
jpayne@1
|
29937 <Hit_num>1</Hit_num>
|
jpayne@1
|
29938 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29939 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29940 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29941 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29942 <Hit_hsps>
|
jpayne@1
|
29943 <Hsp>
|
jpayne@1
|
29944 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29945 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
29946 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
29947 <Hsp_evalue>6.69487e-125</Hsp_evalue>
|
jpayne@1
|
29948 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29949 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29950 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29951 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29952 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
29953 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
29954 <Hsp_identity>400</Hsp_identity>
|
jpayne@1
|
29955 <Hsp_positive>400</Hsp_positive>
|
jpayne@1
|
29956 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
29957 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
29958 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAAACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
29959 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
29960 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||| ||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
29961 </Hsp>
|
jpayne@1
|
29962 </Hit_hsps>
|
jpayne@1
|
29963 </Hit>
|
jpayne@1
|
29964 </Iteration_hits>
|
jpayne@1
|
29965 <Iteration_stat>
|
jpayne@1
|
29966 <Statistics>
|
jpayne@1
|
29967 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
29968 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
29969 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
29970 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
29971 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
29972 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
29973 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
29974 </Statistics>
|
jpayne@1
|
29975 </Iteration_stat>
|
jpayne@1
|
29976 </Iteration>
|
jpayne@1
|
29977 <Iteration>
|
jpayne@1
|
29978 <Iteration_iter-num>578</Iteration_iter-num>
|
jpayne@1
|
29979 <Iteration_query-ID>Query_578</Iteration_query-ID>
|
jpayne@1
|
29980 <Iteration_query-def>fljB_e,n,x,z15_Salmonella.enterica_16:z10:e,n,x,z15_AY353306_e__1506</Iteration_query-def>
|
jpayne@1
|
29981 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
29982 <Iteration_hits>
|
jpayne@1
|
29983 <Hit>
|
jpayne@1
|
29984 <Hit_num>1</Hit_num>
|
jpayne@1
|
29985 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
29986 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
29987 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
29988 <Hit_len>1962</Hit_len>
|
jpayne@1
|
29989 <Hit_hsps>
|
jpayne@1
|
29990 <Hsp>
|
jpayne@1
|
29991 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
29992 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
29993 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
29994 <Hsp_evalue>6.60081e-135</Hsp_evalue>
|
jpayne@1
|
29995 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
29996 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
29997 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
29998 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
29999 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30000 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30001 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
30002 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
30003 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30004 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30005 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30006 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30007 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
30008 </Hsp>
|
jpayne@1
|
30009 </Hit_hsps>
|
jpayne@1
|
30010 </Hit>
|
jpayne@1
|
30011 </Iteration_hits>
|
jpayne@1
|
30012 <Iteration_stat>
|
jpayne@1
|
30013 <Statistics>
|
jpayne@1
|
30014 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30015 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30016 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30017 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30018 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30019 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30020 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30021 </Statistics>
|
jpayne@1
|
30022 </Iteration_stat>
|
jpayne@1
|
30023 </Iteration>
|
jpayne@1
|
30024 <Iteration>
|
jpayne@1
|
30025 <Iteration_iter-num>579</Iteration_iter-num>
|
jpayne@1
|
30026 <Iteration_query-ID>Query_579</Iteration_query-ID>
|
jpayne@1
|
30027 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_Chester_AY353307_e__1506</Iteration_query-def>
|
jpayne@1
|
30028 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30029 <Iteration_hits>
|
jpayne@1
|
30030 <Hit>
|
jpayne@1
|
30031 <Hit_num>1</Hit_num>
|
jpayne@1
|
30032 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30033 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30034 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30035 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30036 <Hit_hsps>
|
jpayne@1
|
30037 <Hsp>
|
jpayne@1
|
30038 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30039 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
30040 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
30041 <Hsp_evalue>1.43897e-126</Hsp_evalue>
|
jpayne@1
|
30042 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30043 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30044 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30045 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30046 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30047 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30048 <Hsp_identity>401</Hsp_identity>
|
jpayne@1
|
30049 <Hsp_positive>401</Hsp_positive>
|
jpayne@1
|
30050 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30051 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30052 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30053 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30054 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30055 </Hsp>
|
jpayne@1
|
30056 <Hsp>
|
jpayne@1
|
30057 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
30058 <Hsp_bit-score>172.859</Hsp_bit-score>
|
jpayne@1
|
30059 <Hsp_score>93</Hsp_score>
|
jpayne@1
|
30060 <Hsp_evalue>7.49724e-45</Hsp_evalue>
|
jpayne@1
|
30061 <Hsp_query-from>1309</Hsp_query-from>
|
jpayne@1
|
30062 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
30063 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
30064 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
30065 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30066 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30067 <Hsp_identity>164</Hsp_identity>
|
jpayne@1
|
30068 <Hsp_positive>164</Hsp_positive>
|
jpayne@1
|
30069 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30070 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
30071 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTCCCGCAGAACGTGCTGTCTCTGTTACGTTAA</Hsp_qseq>
|
jpayne@1
|
30072 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
30073 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || ||| | | ||||||</Hsp_midline>
|
jpayne@1
|
30074 </Hsp>
|
jpayne@1
|
30075 </Hit_hsps>
|
jpayne@1
|
30076 </Hit>
|
jpayne@1
|
30077 </Iteration_hits>
|
jpayne@1
|
30078 <Iteration_stat>
|
jpayne@1
|
30079 <Statistics>
|
jpayne@1
|
30080 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30081 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30082 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30083 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30084 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30085 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30086 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30087 </Statistics>
|
jpayne@1
|
30088 </Iteration_stat>
|
jpayne@1
|
30089 </Iteration>
|
jpayne@1
|
30090 <Iteration>
|
jpayne@1
|
30091 <Iteration_iter-num>580</Iteration_iter-num>
|
jpayne@1
|
30092 <Iteration_query-ID>Query_580</Iteration_query-ID>
|
jpayne@1
|
30093 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_Bonn_AY353308_e__1506</Iteration_query-def>
|
jpayne@1
|
30094 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30095 <Iteration_hits>
|
jpayne@1
|
30096 <Hit>
|
jpayne@1
|
30097 <Hit_num>1</Hit_num>
|
jpayne@1
|
30098 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30099 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30100 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30101 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30102 <Hit_hsps>
|
jpayne@1
|
30103 <Hsp>
|
jpayne@1
|
30104 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30105 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
30106 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
30107 <Hsp_evalue>6.64768e-130</Hsp_evalue>
|
jpayne@1
|
30108 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30109 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30110 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30111 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30112 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30113 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30114 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
30115 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
30116 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30117 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30118 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30119 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30120 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30121 </Hsp>
|
jpayne@1
|
30122 </Hit_hsps>
|
jpayne@1
|
30123 </Hit>
|
jpayne@1
|
30124 </Iteration_hits>
|
jpayne@1
|
30125 <Iteration_stat>
|
jpayne@1
|
30126 <Statistics>
|
jpayne@1
|
30127 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30128 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30129 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30130 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30131 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30132 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30133 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30134 </Statistics>
|
jpayne@1
|
30135 </Iteration_stat>
|
jpayne@1
|
30136 </Iteration>
|
jpayne@1
|
30137 <Iteration>
|
jpayne@1
|
30138 <Iteration_iter-num>581</Iteration_iter-num>
|
jpayne@1
|
30139 <Iteration_query-ID>Query_581</Iteration_query-ID>
|
jpayne@1
|
30140 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_from-CDC_Stk0811_e__1506</Iteration_query-def>
|
jpayne@1
|
30141 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30142 <Iteration_hits>
|
jpayne@1
|
30143 <Hit>
|
jpayne@1
|
30144 <Hit_num>1</Hit_num>
|
jpayne@1
|
30145 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30146 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30147 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30148 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30149 <Hit_hsps>
|
jpayne@1
|
30150 <Hsp>
|
jpayne@1
|
30151 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30152 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
30153 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
30154 <Hsp_evalue>3.11482e-123</Hsp_evalue>
|
jpayne@1
|
30155 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30156 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30157 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30158 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30159 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30160 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30161 <Hsp_identity>399</Hsp_identity>
|
jpayne@1
|
30162 <Hsp_positive>399</Hsp_positive>
|
jpayne@1
|
30163 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30164 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30165 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACTCAGAATAACCTGAACAAATCCCAGTCTGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGCGTGCGTGAACTGGCAGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACCCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30166 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30167 <Hsp_midline>||||||||||| || || || ||||| ||||||||| |||| |||||||||||||||||||| ||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || || |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||| || || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || || || |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30168 </Hsp>
|
jpayne@1
|
30169 </Hit_hsps>
|
jpayne@1
|
30170 </Hit>
|
jpayne@1
|
30171 </Iteration_hits>
|
jpayne@1
|
30172 <Iteration_stat>
|
jpayne@1
|
30173 <Statistics>
|
jpayne@1
|
30174 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30175 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30176 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30177 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30178 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30179 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30180 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30181 </Statistics>
|
jpayne@1
|
30182 </Iteration_stat>
|
jpayne@1
|
30183 </Iteration>
|
jpayne@1
|
30184 <Iteration>
|
jpayne@1
|
30185 <Iteration_iter-num>582</Iteration_iter-num>
|
jpayne@1
|
30186 <Iteration_query-ID>Query_582</Iteration_query-ID>
|
jpayne@1
|
30187 <Iteration_query-def>fljB_e,n,x,z15_Salmonella.enterica_IIIb.42:k:e,n,x,z15_AY353309_e__1506</Iteration_query-def>
|
jpayne@1
|
30188 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30189 <Iteration_hits>
|
jpayne@1
|
30190 <Hit>
|
jpayne@1
|
30191 <Hit_num>1</Hit_num>
|
jpayne@1
|
30192 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30193 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30194 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30195 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30196 <Hit_hsps>
|
jpayne@1
|
30197 <Hsp>
|
jpayne@1
|
30198 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30199 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
30200 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
30201 <Hsp_evalue>3.07106e-133</Hsp_evalue>
|
jpayne@1
|
30202 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30203 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30204 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30205 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30206 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30207 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30208 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
30209 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
30210 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30211 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30212 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30213 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30214 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
30215 </Hsp>
|
jpayne@1
|
30216 </Hit_hsps>
|
jpayne@1
|
30217 </Hit>
|
jpayne@1
|
30218 </Iteration_hits>
|
jpayne@1
|
30219 <Iteration_stat>
|
jpayne@1
|
30220 <Statistics>
|
jpayne@1
|
30221 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30222 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30223 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30224 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30225 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30226 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30227 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30228 </Statistics>
|
jpayne@1
|
30229 </Iteration_stat>
|
jpayne@1
|
30230 </Iteration>
|
jpayne@1
|
30231 <Iteration>
|
jpayne@1
|
30232 <Iteration_iter-num>583</Iteration_iter-num>
|
jpayne@1
|
30233 <Iteration_query-ID>Query_583</Iteration_query-ID>
|
jpayne@1
|
30234 <Iteration_query-def>fljB_e,n,x,z15_Salmonella.enterica_Verity_AY353311_e__1506</Iteration_query-def>
|
jpayne@1
|
30235 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30236 <Iteration_hits>
|
jpayne@1
|
30237 </Iteration_hits>
|
jpayne@1
|
30238 <Iteration_stat>
|
jpayne@1
|
30239 <Statistics>
|
jpayne@1
|
30240 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30241 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30242 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30243 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30244 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30245 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30246 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30247 </Statistics>
|
jpayne@1
|
30248 </Iteration_stat>
|
jpayne@1
|
30249 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
30250 </Iteration>
|
jpayne@1
|
30251 <Iteration>
|
jpayne@1
|
30252 <Iteration_iter-num>584</Iteration_iter-num>
|
jpayne@1
|
30253 <Iteration_query-ID>Query_584</Iteration_query-ID>
|
jpayne@1
|
30254 <Iteration_query-def>fljB_e,n,x,z15_Salmonella.enterica_IIIb.57:i:e,n,x,z15_AY353312_e__1506</Iteration_query-def>
|
jpayne@1
|
30255 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30256 <Iteration_hits>
|
jpayne@1
|
30257 <Hit>
|
jpayne@1
|
30258 <Hit_num>1</Hit_num>
|
jpayne@1
|
30259 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30260 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30261 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30262 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30263 <Hit_hsps>
|
jpayne@1
|
30264 <Hsp>
|
jpayne@1
|
30265 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30266 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
30267 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
30268 <Hsp_evalue>6.60081e-135</Hsp_evalue>
|
jpayne@1
|
30269 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30270 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30271 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30272 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30273 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30274 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30275 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
30276 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
30277 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30278 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30279 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30280 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30281 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
30282 </Hsp>
|
jpayne@1
|
30283 </Hit_hsps>
|
jpayne@1
|
30284 </Hit>
|
jpayne@1
|
30285 </Iteration_hits>
|
jpayne@1
|
30286 <Iteration_stat>
|
jpayne@1
|
30287 <Statistics>
|
jpayne@1
|
30288 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30289 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30290 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30291 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30292 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30293 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30294 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30295 </Statistics>
|
jpayne@1
|
30296 </Iteration_stat>
|
jpayne@1
|
30297 </Iteration>
|
jpayne@1
|
30298 <Iteration>
|
jpayne@1
|
30299 <Iteration_iter-num>585</Iteration_iter-num>
|
jpayne@1
|
30300 <Iteration_query-ID>Query_585</Iteration_query-ID>
|
jpayne@1
|
30301 <Iteration_query-def>fljB_e,n,x,z15_Salmonella.enterica_IIIb.47:i:e,n,x,z15_AY353313_e__1506</Iteration_query-def>
|
jpayne@1
|
30302 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30303 <Iteration_hits>
|
jpayne@1
|
30304 <Hit>
|
jpayne@1
|
30305 <Hit_num>1</Hit_num>
|
jpayne@1
|
30306 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30307 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30308 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30309 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30310 <Hit_hsps>
|
jpayne@1
|
30311 <Hsp>
|
jpayne@1
|
30312 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30313 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
30314 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
30315 <Hsp_evalue>3.07106e-133</Hsp_evalue>
|
jpayne@1
|
30316 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30317 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30318 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30319 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30320 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30321 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30322 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
30323 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
30324 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30325 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30326 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30327 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30328 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
30329 </Hsp>
|
jpayne@1
|
30330 </Hit_hsps>
|
jpayne@1
|
30331 </Hit>
|
jpayne@1
|
30332 </Iteration_hits>
|
jpayne@1
|
30333 <Iteration_stat>
|
jpayne@1
|
30334 <Statistics>
|
jpayne@1
|
30335 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30336 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30337 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30338 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30339 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30340 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30341 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30342 </Statistics>
|
jpayne@1
|
30343 </Iteration_stat>
|
jpayne@1
|
30344 </Iteration>
|
jpayne@1
|
30345 <Iteration>
|
jpayne@1
|
30346 <Iteration_iter-num>586</Iteration_iter-num>
|
jpayne@1
|
30347 <Iteration_query-ID>Query_586</Iteration_query-ID>
|
jpayne@1
|
30348 <Iteration_query-def>fljB_e,n,z15_from-Chailey_SRR1049702_e__1506</Iteration_query-def>
|
jpayne@1
|
30349 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30350 <Iteration_hits>
|
jpayne@1
|
30351 <Hit>
|
jpayne@1
|
30352 <Hit_num>1</Hit_num>
|
jpayne@1
|
30353 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30354 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30355 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30356 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30357 <Hit_hsps>
|
jpayne@1
|
30358 <Hsp>
|
jpayne@1
|
30359 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30360 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
30361 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
30362 <Hsp_evalue>3.09286e-128</Hsp_evalue>
|
jpayne@1
|
30363 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30364 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30365 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30366 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30367 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30368 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30369 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
30370 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
30371 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30372 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30373 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30374 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30375 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30376 </Hsp>
|
jpayne@1
|
30377 </Hit_hsps>
|
jpayne@1
|
30378 </Hit>
|
jpayne@1
|
30379 </Iteration_hits>
|
jpayne@1
|
30380 <Iteration_stat>
|
jpayne@1
|
30381 <Statistics>
|
jpayne@1
|
30382 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30383 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30384 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30385 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30386 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30387 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30388 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30389 </Statistics>
|
jpayne@1
|
30390 </Iteration_stat>
|
jpayne@1
|
30391 </Iteration>
|
jpayne@1
|
30392 <Iteration>
|
jpayne@1
|
30393 <Iteration_iter-num>587</Iteration_iter-num>
|
jpayne@1
|
30394 <Iteration_query-ID>Query_587</Iteration_query-ID>
|
jpayne@1
|
30395 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_II.56:e,n,x:1,7_AY353314_e__1506</Iteration_query-def>
|
jpayne@1
|
30396 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30397 <Iteration_hits>
|
jpayne@1
|
30398 <Hit>
|
jpayne@1
|
30399 <Hit_num>1</Hit_num>
|
jpayne@1
|
30400 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30401 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30402 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30403 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30404 <Hit_hsps>
|
jpayne@1
|
30405 <Hsp>
|
jpayne@1
|
30406 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30407 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
30408 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
30409 <Hsp_evalue>6.64768e-130</Hsp_evalue>
|
jpayne@1
|
30410 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30411 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30412 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30413 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30414 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30415 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30416 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
30417 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
30418 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30419 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30420 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACGCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30421 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30422 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | | ||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| ||| |||||||||</Hsp_midline>
|
jpayne@1
|
30423 </Hsp>
|
jpayne@1
|
30424 </Hit_hsps>
|
jpayne@1
|
30425 </Hit>
|
jpayne@1
|
30426 </Iteration_hits>
|
jpayne@1
|
30427 <Iteration_stat>
|
jpayne@1
|
30428 <Statistics>
|
jpayne@1
|
30429 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30430 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30431 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30432 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30433 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30434 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30435 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30436 </Statistics>
|
jpayne@1
|
30437 </Iteration_stat>
|
jpayne@1
|
30438 </Iteration>
|
jpayne@1
|
30439 <Iteration>
|
jpayne@1
|
30440 <Iteration_iter-num>588</Iteration_iter-num>
|
jpayne@1
|
30441 <Iteration_query-ID>Query_588</Iteration_query-ID>
|
jpayne@1
|
30442 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_Tiergarten_AY353315_e__1506</Iteration_query-def>
|
jpayne@1
|
30443 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30444 <Iteration_hits>
|
jpayne@1
|
30445 <Hit>
|
jpayne@1
|
30446 <Hit_num>1</Hit_num>
|
jpayne@1
|
30447 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30448 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30449 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30450 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30451 <Hit_hsps>
|
jpayne@1
|
30452 <Hsp>
|
jpayne@1
|
30453 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30454 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
30455 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
30456 <Hsp_evalue>3.09286e-128</Hsp_evalue>
|
jpayne@1
|
30457 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30458 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30459 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30460 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30461 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30462 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30463 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
30464 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
30465 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30466 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30467 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTTTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30468 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30469 <Hsp_midline>||||||||||| || || || ||||| |||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30470 </Hsp>
|
jpayne@1
|
30471 </Hit_hsps>
|
jpayne@1
|
30472 </Hit>
|
jpayne@1
|
30473 </Iteration_hits>
|
jpayne@1
|
30474 <Iteration_stat>
|
jpayne@1
|
30475 <Statistics>
|
jpayne@1
|
30476 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30477 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30478 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30479 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30480 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30481 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30482 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30483 </Statistics>
|
jpayne@1
|
30484 </Iteration_stat>
|
jpayne@1
|
30485 </Iteration>
|
jpayne@1
|
30486 <Iteration>
|
jpayne@1
|
30487 <Iteration_iter-num>589</Iteration_iter-num>
|
jpayne@1
|
30488 <Iteration_query-ID>Query_589</Iteration_query-ID>
|
jpayne@1
|
30489 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_II.9,46:e,n,x:1,5,7_AY353316_e__1506</Iteration_query-def>
|
jpayne@1
|
30490 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30491 <Iteration_hits>
|
jpayne@1
|
30492 <Hit>
|
jpayne@1
|
30493 <Hit_num>1</Hit_num>
|
jpayne@1
|
30494 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30495 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30496 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30497 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30498 <Hit_hsps>
|
jpayne@1
|
30499 <Hsp>
|
jpayne@1
|
30500 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30501 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
30502 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
30503 <Hsp_evalue>3.09286e-128</Hsp_evalue>
|
jpayne@1
|
30504 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30505 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30506 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30507 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30508 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30509 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30510 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
30511 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
30512 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30513 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30514 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACGCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATTCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGATGGTGAAACTATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30515 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30516 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| ||||| |||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | ||||| |||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || |||||||||||||| ||| |||||||||</Hsp_midline>
|
jpayne@1
|
30517 </Hsp>
|
jpayne@1
|
30518 </Hit_hsps>
|
jpayne@1
|
30519 </Hit>
|
jpayne@1
|
30520 </Iteration_hits>
|
jpayne@1
|
30521 <Iteration_stat>
|
jpayne@1
|
30522 <Statistics>
|
jpayne@1
|
30523 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30524 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30525 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30526 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30527 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30528 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30529 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30530 </Statistics>
|
jpayne@1
|
30531 </Iteration_stat>
|
jpayne@1
|
30532 </Iteration>
|
jpayne@1
|
30533 <Iteration>
|
jpayne@1
|
30534 <Iteration_iter-num>590</Iteration_iter-num>
|
jpayne@1
|
30535 <Iteration_query-ID>Query_590</Iteration_query-ID>
|
jpayne@1
|
30536 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_Bessi_AY353317_e__1506</Iteration_query-def>
|
jpayne@1
|
30537 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30538 <Iteration_hits>
|
jpayne@1
|
30539 <Hit>
|
jpayne@1
|
30540 <Hit_num>1</Hit_num>
|
jpayne@1
|
30541 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30542 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30543 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30544 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30545 <Hit_hsps>
|
jpayne@1
|
30546 <Hsp>
|
jpayne@1
|
30547 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30548 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
30549 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
30550 <Hsp_evalue>3.09286e-128</Hsp_evalue>
|
jpayne@1
|
30551 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30552 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30553 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30554 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30555 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30556 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30557 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
30558 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
30559 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30560 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30561 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAATGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30562 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30563 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||| ||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30564 </Hsp>
|
jpayne@1
|
30565 </Hit_hsps>
|
jpayne@1
|
30566 </Hit>
|
jpayne@1
|
30567 </Iteration_hits>
|
jpayne@1
|
30568 <Iteration_stat>
|
jpayne@1
|
30569 <Statistics>
|
jpayne@1
|
30570 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30571 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30572 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30573 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30574 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30575 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30576 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30577 </Statistics>
|
jpayne@1
|
30578 </Iteration_stat>
|
jpayne@1
|
30579 </Iteration>
|
jpayne@1
|
30580 <Iteration>
|
jpayne@1
|
30581 <Iteration_iter-num>591</Iteration_iter-num>
|
jpayne@1
|
30582 <Iteration_query-ID>Query_591</Iteration_query-ID>
|
jpayne@1
|
30583 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_Tambacounda_AY353318_e__1506</Iteration_query-def>
|
jpayne@1
|
30584 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30585 <Iteration_hits>
|
jpayne@1
|
30586 <Hit>
|
jpayne@1
|
30587 <Hit_num>1</Hit_num>
|
jpayne@1
|
30588 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30589 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30590 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30591 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30592 <Hit_hsps>
|
jpayne@1
|
30593 <Hsp>
|
jpayne@1
|
30594 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30595 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
30596 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
30597 <Hsp_evalue>6.69487e-125</Hsp_evalue>
|
jpayne@1
|
30598 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30599 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30600 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30601 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30602 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30603 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30604 <Hsp_identity>400</Hsp_identity>
|
jpayne@1
|
30605 <Hsp_positive>400</Hsp_positive>
|
jpayne@1
|
30606 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30607 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30608 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCCTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30609 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30610 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || |||||||||||||||||||| |||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30611 </Hsp>
|
jpayne@1
|
30612 </Hit_hsps>
|
jpayne@1
|
30613 </Hit>
|
jpayne@1
|
30614 </Iteration_hits>
|
jpayne@1
|
30615 <Iteration_stat>
|
jpayne@1
|
30616 <Statistics>
|
jpayne@1
|
30617 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30618 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30619 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30620 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30621 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30622 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30623 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30624 </Statistics>
|
jpayne@1
|
30625 </Iteration_stat>
|
jpayne@1
|
30626 </Iteration>
|
jpayne@1
|
30627 <Iteration>
|
jpayne@1
|
30628 <Iteration_iter-num>592</Iteration_iter-num>
|
jpayne@1
|
30629 <Iteration_query-ID>Query_592</Iteration_query-ID>
|
jpayne@1
|
30630 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_Kokomlemle_AY353319_e__1506</Iteration_query-def>
|
jpayne@1
|
30631 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30632 <Iteration_hits>
|
jpayne@1
|
30633 <Hit>
|
jpayne@1
|
30634 <Hit_num>1</Hit_num>
|
jpayne@1
|
30635 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30636 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30637 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30638 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30639 <Hit_hsps>
|
jpayne@1
|
30640 <Hsp>
|
jpayne@1
|
30641 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30642 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
30643 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
30644 <Hsp_evalue>6.64768e-130</Hsp_evalue>
|
jpayne@1
|
30645 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30646 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30647 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30648 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30649 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30650 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30651 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
30652 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
30653 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30654 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30655 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCTATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30656 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30657 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30658 </Hsp>
|
jpayne@1
|
30659 </Hit_hsps>
|
jpayne@1
|
30660 </Hit>
|
jpayne@1
|
30661 </Iteration_hits>
|
jpayne@1
|
30662 <Iteration_stat>
|
jpayne@1
|
30663 <Statistics>
|
jpayne@1
|
30664 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30665 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30666 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30667 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30668 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30669 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30670 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30671 </Statistics>
|
jpayne@1
|
30672 </Iteration_stat>
|
jpayne@1
|
30673 </Iteration>
|
jpayne@1
|
30674 <Iteration>
|
jpayne@1
|
30675 <Iteration_iter-num>593</Iteration_iter-num>
|
jpayne@1
|
30676 <Iteration_query-ID>Query_593</Iteration_query-ID>
|
jpayne@1
|
30677 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_II.9,12:lw:enx_AY353320_e__1506</Iteration_query-def>
|
jpayne@1
|
30678 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30679 <Iteration_hits>
|
jpayne@1
|
30680 <Hit>
|
jpayne@1
|
30681 <Hit_num>1</Hit_num>
|
jpayne@1
|
30682 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30683 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30684 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30685 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30686 <Hit_hsps>
|
jpayne@1
|
30687 <Hsp>
|
jpayne@1
|
30688 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30689 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
30690 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
30691 <Hsp_evalue>6.64768e-130</Hsp_evalue>
|
jpayne@1
|
30692 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30693 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30694 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30695 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30696 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30697 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30698 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
30699 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
30700 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30701 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30702 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACTGCTATCGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACGCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGATGGTGAAACTATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30703 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30704 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | | ||||| |||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || |||||||||||||| ||| |||||||||</Hsp_midline>
|
jpayne@1
|
30705 </Hsp>
|
jpayne@1
|
30706 </Hit_hsps>
|
jpayne@1
|
30707 </Hit>
|
jpayne@1
|
30708 </Iteration_hits>
|
jpayne@1
|
30709 <Iteration_stat>
|
jpayne@1
|
30710 <Statistics>
|
jpayne@1
|
30711 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30712 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30713 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30714 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30715 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30716 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30717 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30718 </Statistics>
|
jpayne@1
|
30719 </Iteration_stat>
|
jpayne@1
|
30720 </Iteration>
|
jpayne@1
|
30721 <Iteration>
|
jpayne@1
|
30722 <Iteration_iter-num>594</Iteration_iter-num>
|
jpayne@1
|
30723 <Iteration_query-ID>Query_594</Iteration_query-ID>
|
jpayne@1
|
30724 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_Chester_AY353321_e__1506</Iteration_query-def>
|
jpayne@1
|
30725 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30726 <Iteration_hits>
|
jpayne@1
|
30727 <Hit>
|
jpayne@1
|
30728 <Hit_num>1</Hit_num>
|
jpayne@1
|
30729 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30730 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30731 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30732 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30733 <Hit_hsps>
|
jpayne@1
|
30734 <Hsp>
|
jpayne@1
|
30735 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30736 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
30737 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
30738 <Hsp_evalue>1.43897e-126</Hsp_evalue>
|
jpayne@1
|
30739 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30740 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30741 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30742 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30743 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30744 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30745 <Hsp_identity>401</Hsp_identity>
|
jpayne@1
|
30746 <Hsp_positive>401</Hsp_positive>
|
jpayne@1
|
30747 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30748 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30749 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30750 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30751 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30752 </Hsp>
|
jpayne@1
|
30753 <Hsp>
|
jpayne@1
|
30754 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
30755 <Hsp_bit-score>172.859</Hsp_bit-score>
|
jpayne@1
|
30756 <Hsp_score>93</Hsp_score>
|
jpayne@1
|
30757 <Hsp_evalue>7.49724e-45</Hsp_evalue>
|
jpayne@1
|
30758 <Hsp_query-from>1309</Hsp_query-from>
|
jpayne@1
|
30759 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
30760 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
30761 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
30762 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30763 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30764 <Hsp_identity>164</Hsp_identity>
|
jpayne@1
|
30765 <Hsp_positive>164</Hsp_positive>
|
jpayne@1
|
30766 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30767 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
30768 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTCCCGCAGAACGTGCTGTCTCTGTTACGTTAA</Hsp_qseq>
|
jpayne@1
|
30769 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
30770 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || ||| | | ||||||</Hsp_midline>
|
jpayne@1
|
30771 </Hsp>
|
jpayne@1
|
30772 </Hit_hsps>
|
jpayne@1
|
30773 </Hit>
|
jpayne@1
|
30774 </Iteration_hits>
|
jpayne@1
|
30775 <Iteration_stat>
|
jpayne@1
|
30776 <Statistics>
|
jpayne@1
|
30777 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30778 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30779 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30780 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30781 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30782 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30783 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30784 </Statistics>
|
jpayne@1
|
30785 </Iteration_stat>
|
jpayne@1
|
30786 </Iteration>
|
jpayne@1
|
30787 <Iteration>
|
jpayne@1
|
30788 <Iteration_iter-num>595</Iteration_iter-num>
|
jpayne@1
|
30789 <Iteration_query-ID>Query_595</Iteration_query-ID>
|
jpayne@1
|
30790 <Iteration_query-def>fljB_e,n,x_Salmonella.enterica_Gatuni_AY353322_e__1506</Iteration_query-def>
|
jpayne@1
|
30791 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30792 <Iteration_hits>
|
jpayne@1
|
30793 <Hit>
|
jpayne@1
|
30794 <Hit_num>1</Hit_num>
|
jpayne@1
|
30795 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30796 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30797 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30798 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30799 <Hit_hsps>
|
jpayne@1
|
30800 <Hsp>
|
jpayne@1
|
30801 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30802 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
30803 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
30804 <Hsp_evalue>6.69487e-125</Hsp_evalue>
|
jpayne@1
|
30805 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30806 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30807 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30808 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30809 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30810 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30811 <Hsp_identity>400</Hsp_identity>
|
jpayne@1
|
30812 <Hsp_positive>400</Hsp_positive>
|
jpayne@1
|
30813 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30814 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30815 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30816 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30817 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30818 </Hsp>
|
jpayne@1
|
30819 <Hsp>
|
jpayne@1
|
30820 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
30821 <Hsp_bit-score>172.859</Hsp_bit-score>
|
jpayne@1
|
30822 <Hsp_score>93</Hsp_score>
|
jpayne@1
|
30823 <Hsp_evalue>7.49724e-45</Hsp_evalue>
|
jpayne@1
|
30824 <Hsp_query-from>1309</Hsp_query-from>
|
jpayne@1
|
30825 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
30826 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
30827 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
30828 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30829 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30830 <Hsp_identity>164</Hsp_identity>
|
jpayne@1
|
30831 <Hsp_positive>164</Hsp_positive>
|
jpayne@1
|
30832 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30833 <Hsp_align-len>199</Hsp_align-len>
|
jpayne@1
|
30834 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTCCCGCAGAACGTGCTGTCTCTGTTACGTTAA</Hsp_qseq>
|
jpayne@1
|
30835 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
30836 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || ||| | | ||||||</Hsp_midline>
|
jpayne@1
|
30837 </Hsp>
|
jpayne@1
|
30838 </Hit_hsps>
|
jpayne@1
|
30839 </Hit>
|
jpayne@1
|
30840 </Iteration_hits>
|
jpayne@1
|
30841 <Iteration_stat>
|
jpayne@1
|
30842 <Statistics>
|
jpayne@1
|
30843 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30844 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30845 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30846 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30847 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30848 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30849 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30850 </Statistics>
|
jpayne@1
|
30851 </Iteration_stat>
|
jpayne@1
|
30852 </Iteration>
|
jpayne@1
|
30853 <Iteration>
|
jpayne@1
|
30854 <Iteration_iter-num>596</Iteration_iter-num>
|
jpayne@1
|
30855 <Iteration_query-ID>Query_596</Iteration_query-ID>
|
jpayne@1
|
30856 <Iteration_query-def>fljB_e,n,z15_Salmonella.enterica_Brandenburg_AY353323_e__1506</Iteration_query-def>
|
jpayne@1
|
30857 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30858 <Iteration_hits>
|
jpayne@1
|
30859 <Hit>
|
jpayne@1
|
30860 <Hit_num>1</Hit_num>
|
jpayne@1
|
30861 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30862 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30863 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30864 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30865 <Hit_hsps>
|
jpayne@1
|
30866 <Hsp>
|
jpayne@1
|
30867 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30868 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
30869 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
30870 <Hsp_evalue>3.09286e-128</Hsp_evalue>
|
jpayne@1
|
30871 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30872 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30873 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30874 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30875 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30876 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30877 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
30878 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
30879 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30880 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30881 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTAACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30882 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30883 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||| ||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30884 </Hsp>
|
jpayne@1
|
30885 </Hit_hsps>
|
jpayne@1
|
30886 </Hit>
|
jpayne@1
|
30887 </Iteration_hits>
|
jpayne@1
|
30888 <Iteration_stat>
|
jpayne@1
|
30889 <Statistics>
|
jpayne@1
|
30890 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30891 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30892 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30893 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30894 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30895 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30896 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30897 </Statistics>
|
jpayne@1
|
30898 </Iteration_stat>
|
jpayne@1
|
30899 </Iteration>
|
jpayne@1
|
30900 <Iteration>
|
jpayne@1
|
30901 <Iteration_iter-num>597</Iteration_iter-num>
|
jpayne@1
|
30902 <Iteration_query-ID>Query_597</Iteration_query-ID>
|
jpayne@1
|
30903 <Iteration_query-def>fljB_e,n,z15_Salmonella.enterica_Braenderup_AY353324_e__1506</Iteration_query-def>
|
jpayne@1
|
30904 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30905 <Iteration_hits>
|
jpayne@1
|
30906 <Hit>
|
jpayne@1
|
30907 <Hit_num>1</Hit_num>
|
jpayne@1
|
30908 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30909 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30910 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30911 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30912 <Hit_hsps>
|
jpayne@1
|
30913 <Hsp>
|
jpayne@1
|
30914 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30915 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
30916 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
30917 <Hsp_evalue>3.09286e-128</Hsp_evalue>
|
jpayne@1
|
30918 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30919 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30920 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30921 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30922 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30923 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30924 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
30925 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
30926 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30927 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30928 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30929 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30930 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30931 </Hsp>
|
jpayne@1
|
30932 </Hit_hsps>
|
jpayne@1
|
30933 </Hit>
|
jpayne@1
|
30934 </Iteration_hits>
|
jpayne@1
|
30935 <Iteration_stat>
|
jpayne@1
|
30936 <Statistics>
|
jpayne@1
|
30937 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30938 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30939 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30940 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30941 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30942 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30943 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30944 </Statistics>
|
jpayne@1
|
30945 </Iteration_stat>
|
jpayne@1
|
30946 </Iteration>
|
jpayne@1
|
30947 <Iteration>
|
jpayne@1
|
30948 <Iteration_iter-num>598</Iteration_iter-num>
|
jpayne@1
|
30949 <Iteration_query-ID>Query_598</Iteration_query-ID>
|
jpayne@1
|
30950 <Iteration_query-def>fljB_e,n,z15_Salmonella.enterica_Uno_AY353325_e__1506</Iteration_query-def>
|
jpayne@1
|
30951 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30952 <Iteration_hits>
|
jpayne@1
|
30953 <Hit>
|
jpayne@1
|
30954 <Hit_num>1</Hit_num>
|
jpayne@1
|
30955 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
30956 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
30957 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
30958 <Hit_len>1962</Hit_len>
|
jpayne@1
|
30959 <Hit_hsps>
|
jpayne@1
|
30960 <Hsp>
|
jpayne@1
|
30961 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
30962 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
30963 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
30964 <Hsp_evalue>3.09286e-128</Hsp_evalue>
|
jpayne@1
|
30965 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
30966 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
30967 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
30968 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
30969 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
30970 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
30971 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
30972 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
30973 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
30974 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
30975 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
30976 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
30977 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
30978 </Hsp>
|
jpayne@1
|
30979 </Hit_hsps>
|
jpayne@1
|
30980 </Hit>
|
jpayne@1
|
30981 </Iteration_hits>
|
jpayne@1
|
30982 <Iteration_stat>
|
jpayne@1
|
30983 <Statistics>
|
jpayne@1
|
30984 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
30985 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
30986 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
30987 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
30988 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
30989 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
30990 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
30991 </Statistics>
|
jpayne@1
|
30992 </Iteration_stat>
|
jpayne@1
|
30993 </Iteration>
|
jpayne@1
|
30994 <Iteration>
|
jpayne@1
|
30995 <Iteration_iter-num>599</Iteration_iter-num>
|
jpayne@1
|
30996 <Iteration_query-ID>Query_599</Iteration_query-ID>
|
jpayne@1
|
30997 <Iteration_query-def>fljB_e,n,z15_Salmonella.enterica_Sanktgeorg_AY353326_e__1506</Iteration_query-def>
|
jpayne@1
|
30998 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
30999 <Iteration_hits>
|
jpayne@1
|
31000 <Hit>
|
jpayne@1
|
31001 <Hit_num>1</Hit_num>
|
jpayne@1
|
31002 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31003 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31004 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31005 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31006 <Hit_hsps>
|
jpayne@1
|
31007 <Hsp>
|
jpayne@1
|
31008 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31009 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
31010 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
31011 <Hsp_evalue>6.64768e-130</Hsp_evalue>
|
jpayne@1
|
31012 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31013 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31014 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31015 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31016 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31017 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31018 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
31019 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
31020 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31021 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31022 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCAGCACTGGGCACCGCTATTGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31023 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31024 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| ||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
31025 </Hsp>
|
jpayne@1
|
31026 </Hit_hsps>
|
jpayne@1
|
31027 </Hit>
|
jpayne@1
|
31028 </Iteration_hits>
|
jpayne@1
|
31029 <Iteration_stat>
|
jpayne@1
|
31030 <Statistics>
|
jpayne@1
|
31031 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31032 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31033 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31034 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
31035 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31036 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31037 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31038 </Statistics>
|
jpayne@1
|
31039 </Iteration_stat>
|
jpayne@1
|
31040 </Iteration>
|
jpayne@1
|
31041 <Iteration>
|
jpayne@1
|
31042 <Iteration_iter-num>600</Iteration_iter-num>
|
jpayne@1
|
31043 <Iteration_query-ID>Query_600</Iteration_query-ID>
|
jpayne@1
|
31044 <Iteration_query-def>fljB_k_Salmonella.enterica_II.52:c:k_AY353328_k,z__1488</Iteration_query-def>
|
jpayne@1
|
31045 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
31046 <Iteration_hits>
|
jpayne@1
|
31047 <Hit>
|
jpayne@1
|
31048 <Hit_num>1</Hit_num>
|
jpayne@1
|
31049 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31050 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31051 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31052 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31053 <Hit_hsps>
|
jpayne@1
|
31054 <Hsp>
|
jpayne@1
|
31055 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31056 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
31057 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
31058 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
31059 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31060 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31061 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31062 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31063 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31064 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31065 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
31066 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
31067 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31068 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31069 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGGCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCACAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACTCTGACCATTCAGGTTGGCGCCAACGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31070 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31071 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| || |||||||| || ||||| |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
31072 </Hsp>
|
jpayne@1
|
31073 </Hit_hsps>
|
jpayne@1
|
31074 </Hit>
|
jpayne@1
|
31075 </Iteration_hits>
|
jpayne@1
|
31076 <Iteration_stat>
|
jpayne@1
|
31077 <Statistics>
|
jpayne@1
|
31078 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31079 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31080 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31081 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
31082 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31083 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31084 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31085 </Statistics>
|
jpayne@1
|
31086 </Iteration_stat>
|
jpayne@1
|
31087 </Iteration>
|
jpayne@1
|
31088 <Iteration>
|
jpayne@1
|
31089 <Iteration_iter-num>601</Iteration_iter-num>
|
jpayne@1
|
31090 <Iteration_query-ID>Query_601</Iteration_query-ID>
|
jpayne@1
|
31091 <Iteration_query-def>fljB_k_Salmonella.enterica_II.13,23:k:z41_AY353329_k,z__1488</Iteration_query-def>
|
jpayne@1
|
31092 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
31093 <Iteration_hits>
|
jpayne@1
|
31094 <Hit>
|
jpayne@1
|
31095 <Hit_num>1</Hit_num>
|
jpayne@1
|
31096 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31097 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31098 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31099 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31100 <Hit_hsps>
|
jpayne@1
|
31101 <Hsp>
|
jpayne@1
|
31102 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31103 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
31104 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
31105 <Hsp_evalue>1.40159e-136</Hsp_evalue>
|
jpayne@1
|
31106 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31107 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31108 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31109 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31110 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31111 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31112 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
31113 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
31114 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31115 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31116 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGGCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCACAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31117 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31118 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
31119 </Hsp>
|
jpayne@1
|
31120 </Hit_hsps>
|
jpayne@1
|
31121 </Hit>
|
jpayne@1
|
31122 </Iteration_hits>
|
jpayne@1
|
31123 <Iteration_stat>
|
jpayne@1
|
31124 <Statistics>
|
jpayne@1
|
31125 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31126 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31127 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31128 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
31129 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31130 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31131 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31132 </Statistics>
|
jpayne@1
|
31133 </Iteration_stat>
|
jpayne@1
|
31134 </Iteration>
|
jpayne@1
|
31135 <Iteration>
|
jpayne@1
|
31136 <Iteration_iter-num>602</Iteration_iter-num>
|
jpayne@1
|
31137 <Iteration_query-ID>Query_602</Iteration_query-ID>
|
jpayne@1
|
31138 <Iteration_query-def>fljB_k_Salmonella.enterica_IIIb.52:c:k_AY353330_k,z__1488</Iteration_query-def>
|
jpayne@1
|
31139 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
31140 <Iteration_hits>
|
jpayne@1
|
31141 <Hit>
|
jpayne@1
|
31142 <Hit_num>1</Hit_num>
|
jpayne@1
|
31143 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31144 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31145 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31146 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31147 <Hit_hsps>
|
jpayne@1
|
31148 <Hsp>
|
jpayne@1
|
31149 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31150 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
31151 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
31152 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
31153 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31154 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31155 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31156 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31157 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31158 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31159 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
31160 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
31161 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31162 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31163 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGGCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGACAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCACAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACTCTGACCATTCAGGTTGGCGCCAACGACGGTGAAACCATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31164 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31165 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||| ||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || ||||||||||||||||||||||||||||||||||||||||| ||||||||||| |||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||||||| ||| || |||||||| || ||||| |||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
31166 </Hsp>
|
jpayne@1
|
31167 </Hit_hsps>
|
jpayne@1
|
31168 </Hit>
|
jpayne@1
|
31169 </Iteration_hits>
|
jpayne@1
|
31170 <Iteration_stat>
|
jpayne@1
|
31171 <Statistics>
|
jpayne@1
|
31172 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31173 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31174 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31175 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
31176 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31177 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31178 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31179 </Statistics>
|
jpayne@1
|
31180 </Iteration_stat>
|
jpayne@1
|
31181 </Iteration>
|
jpayne@1
|
31182 <Iteration>
|
jpayne@1
|
31183 <Iteration_iter-num>603</Iteration_iter-num>
|
jpayne@1
|
31184 <Iteration_query-ID>Query_603</Iteration_query-ID>
|
jpayne@1
|
31185 <Iteration_query-def>fljB_l,w_Salmonella.enterica_Ohio_AY353331_l,v__1503</Iteration_query-def>
|
jpayne@1
|
31186 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
31187 <Iteration_hits>
|
jpayne@1
|
31188 <Hit>
|
jpayne@1
|
31189 <Hit_num>1</Hit_num>
|
jpayne@1
|
31190 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31191 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31192 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31193 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31194 <Hit_hsps>
|
jpayne@1
|
31195 <Hsp>
|
jpayne@1
|
31196 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31197 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
31198 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
31199 <Hsp_evalue>6.58751e-135</Hsp_evalue>
|
jpayne@1
|
31200 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31201 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31202 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31203 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31204 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31205 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31206 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
31207 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
31208 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31209 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31210 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGTGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCACAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31211 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31212 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
31213 </Hsp>
|
jpayne@1
|
31214 </Hit_hsps>
|
jpayne@1
|
31215 </Hit>
|
jpayne@1
|
31216 </Iteration_hits>
|
jpayne@1
|
31217 <Iteration_stat>
|
jpayne@1
|
31218 <Statistics>
|
jpayne@1
|
31219 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31220 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31221 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31222 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
31223 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31224 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31225 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31226 </Statistics>
|
jpayne@1
|
31227 </Iteration_stat>
|
jpayne@1
|
31228 </Iteration>
|
jpayne@1
|
31229 <Iteration>
|
jpayne@1
|
31230 <Iteration_iter-num>604</Iteration_iter-num>
|
jpayne@1
|
31231 <Iteration_query-ID>Query_604</Iteration_query-ID>
|
jpayne@1
|
31232 <Iteration_query-def>fljB_l,w_Salmonella.enterica_Gloucester_AY353332_l,v__1503</Iteration_query-def>
|
jpayne@1
|
31233 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
31234 <Iteration_hits>
|
jpayne@1
|
31235 <Hit>
|
jpayne@1
|
31236 <Hit_num>1</Hit_num>
|
jpayne@1
|
31237 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31238 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31239 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31240 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31241 <Hit_hsps>
|
jpayne@1
|
31242 <Hsp>
|
jpayne@1
|
31243 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31244 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
31245 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
31246 <Hsp_evalue>1.43607e-126</Hsp_evalue>
|
jpayne@1
|
31247 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31248 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31249 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31250 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31251 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31252 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31253 <Hsp_identity>401</Hsp_identity>
|
jpayne@1
|
31254 <Hsp_positive>401</Hsp_positive>
|
jpayne@1
|
31255 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31256 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31257 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31258 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31259 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
31260 </Hsp>
|
jpayne@1
|
31261 </Hit_hsps>
|
jpayne@1
|
31262 </Hit>
|
jpayne@1
|
31263 </Iteration_hits>
|
jpayne@1
|
31264 <Iteration_stat>
|
jpayne@1
|
31265 <Statistics>
|
jpayne@1
|
31266 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31267 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31268 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31269 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
31270 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31271 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31272 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31273 </Statistics>
|
jpayne@1
|
31274 </Iteration_stat>
|
jpayne@1
|
31275 </Iteration>
|
jpayne@1
|
31276 <Iteration>
|
jpayne@1
|
31277 <Iteration_iter-num>605</Iteration_iter-num>
|
jpayne@1
|
31278 <Iteration_query-ID>Query_605</Iteration_query-ID>
|
jpayne@1
|
31279 <Iteration_query-def>fljB_l,z13,z28_Salmonella.enterica_Poano_AY353333_l,v__1506</Iteration_query-def>
|
jpayne@1
|
31280 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
31281 <Iteration_hits>
|
jpayne@1
|
31282 <Hit>
|
jpayne@1
|
31283 <Hit_num>1</Hit_num>
|
jpayne@1
|
31284 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31285 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31286 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31287 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31288 <Hit_hsps>
|
jpayne@1
|
31289 <Hsp>
|
jpayne@1
|
31290 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31291 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
31292 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
31293 <Hsp_evalue>1.42883e-131</Hsp_evalue>
|
jpayne@1
|
31294 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31295 <Hsp_query-to>483</Hsp_query-to>
|
jpayne@1
|
31296 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31297 <Hsp_hit-to>1260</Hsp_hit-to>
|
jpayne@1
|
31298 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31299 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31300 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
31301 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
31302 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
31303 <Hsp_align-len>485</Hsp_align-len>
|
jpayne@1
|
31304 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAAACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTTTCTGGCCAGACCCAGTTCAACGGCGTGAAAGTTCTGGCACAGGACAACACCCTGACCATCCAGGTCGGCGCTAACGACGGTGAAACCATTGATATCGATCTG-AAA</Hsp_qseq>
|
jpayne@1
|
31305 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAA</Hsp_hseq>
|
jpayne@1
|
31306 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || |||||| ||||| || || ||||| || ||||| ||| | ||||||||| ||| |||||||| || |||||||| |||||||||||| ||||||||| |||</Hsp_midline>
|
jpayne@1
|
31307 </Hsp>
|
jpayne@1
|
31308 </Hit_hsps>
|
jpayne@1
|
31309 </Hit>
|
jpayne@1
|
31310 </Iteration_hits>
|
jpayne@1
|
31311 <Iteration_stat>
|
jpayne@1
|
31312 <Statistics>
|
jpayne@1
|
31313 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31314 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31315 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31316 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
31317 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31318 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31319 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31320 </Statistics>
|
jpayne@1
|
31321 </Iteration_stat>
|
jpayne@1
|
31322 </Iteration>
|
jpayne@1
|
31323 <Iteration>
|
jpayne@1
|
31324 <Iteration_iter-num>606</Iteration_iter-num>
|
jpayne@1
|
31325 <Iteration_query-ID>Query_606</Iteration_query-ID>
|
jpayne@1
|
31326 <Iteration_query-def>fljB_l,z13,z28_Salmonella.enterica_Lutetia_AY353334_l,v__1506</Iteration_query-def>
|
jpayne@1
|
31327 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
31328 <Iteration_hits>
|
jpayne@1
|
31329 <Hit>
|
jpayne@1
|
31330 <Hit_num>1</Hit_num>
|
jpayne@1
|
31331 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31332 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31333 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31334 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31335 <Hit_hsps>
|
jpayne@1
|
31336 <Hsp>
|
jpayne@1
|
31337 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31338 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
31339 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
31340 <Hsp_evalue>1.42883e-131</Hsp_evalue>
|
jpayne@1
|
31341 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31342 <Hsp_query-to>483</Hsp_query-to>
|
jpayne@1
|
31343 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31344 <Hsp_hit-to>1260</Hsp_hit-to>
|
jpayne@1
|
31345 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31346 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31347 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
31348 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
31349 <Hsp_gaps>3</Hsp_gaps>
|
jpayne@1
|
31350 <Hsp_align-len>485</Hsp_align-len>
|
jpayne@1
|
31351 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACCATTGATATCGATCTG-AAA</Hsp_qseq>
|
jpayne@1
|
31352 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAA</Hsp_hseq>
|
jpayne@1
|
31353 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||||||| ||||||||| |||</Hsp_midline>
|
jpayne@1
|
31354 </Hsp>
|
jpayne@1
|
31355 </Hit_hsps>
|
jpayne@1
|
31356 </Hit>
|
jpayne@1
|
31357 </Iteration_hits>
|
jpayne@1
|
31358 <Iteration_stat>
|
jpayne@1
|
31359 <Statistics>
|
jpayne@1
|
31360 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31361 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31362 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31363 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
31364 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31365 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31366 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31367 </Statistics>
|
jpayne@1
|
31368 </Iteration_stat>
|
jpayne@1
|
31369 </Iteration>
|
jpayne@1
|
31370 <Iteration>
|
jpayne@1
|
31371 <Iteration_iter-num>607</Iteration_iter-num>
|
jpayne@1
|
31372 <Iteration_query-ID>Query_607</Iteration_query-ID>
|
jpayne@1
|
31373 <Iteration_query-def>fliC_l,z13,z28_Salmonella.enterica_Hiduddify_DTU-unknown_l,v__1506</Iteration_query-def>
|
jpayne@1
|
31374 <Iteration_query-len>1506</Iteration_query-len>
|
jpayne@1
|
31375 <Iteration_hits>
|
jpayne@1
|
31376 <Hit>
|
jpayne@1
|
31377 <Hit_num>1</Hit_num>
|
jpayne@1
|
31378 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31379 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31380 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31381 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31382 <Hit_hsps>
|
jpayne@1
|
31383 <Hsp>
|
jpayne@1
|
31384 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31385 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
31386 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
31387 <Hsp_evalue>1.41875e-136</Hsp_evalue>
|
jpayne@1
|
31388 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31389 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31390 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31391 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31392 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31393 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31394 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
31395 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
31396 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31397 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31398 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31399 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31400 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
31401 </Hsp>
|
jpayne@1
|
31402 <Hsp>
|
jpayne@1
|
31403 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
31404 <Hsp_bit-score>241.185</Hsp_bit-score>
|
jpayne@1
|
31405 <Hsp_score>130</Hsp_score>
|
jpayne@1
|
31406 <Hsp_evalue>2.02635e-65</Hsp_evalue>
|
jpayne@1
|
31407 <Hsp_query-from>1251</Hsp_query-from>
|
jpayne@1
|
31408 <Hsp_query-to>1506</Hsp_query-to>
|
jpayne@1
|
31409 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
31410 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
31411 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31412 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31413 <Hsp_identity>215</Hsp_identity>
|
jpayne@1
|
31414 <Hsp_positive>215</Hsp_positive>
|
jpayne@1
|
31415 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31416 <Hsp_align-len>257</Hsp_align-len>
|
jpayne@1
|
31417 <Hsp_qseq>AATTGATGCTGCTTTGGCACAGGTTGACAC-GTTACGTTCTGACCTGGGTGCGGTACAGAACCGTTTCAACTCCGCTATTACCAACCTGGGCAACACCGTAAACAACCTGACTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTTTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
31418 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTT-CGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
31419 <Hsp_midline>||||||| |||| ||| || | || ||| | ||| |||||| ||||| || | || |||||||| | || || ||||||||||| ||||| || |||| ||| |||| || ||||||||||||||||||||| | ||||| || || |||||||| || |||||| |||||||||||||||||||| ||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
31420 </Hsp>
|
jpayne@1
|
31421 </Hit_hsps>
|
jpayne@1
|
31422 </Hit>
|
jpayne@1
|
31423 </Iteration_hits>
|
jpayne@1
|
31424 <Iteration_stat>
|
jpayne@1
|
31425 <Statistics>
|
jpayne@1
|
31426 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31427 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31428 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31429 <Statistics_eff-space>81387648</Statistics_eff-space>
|
jpayne@1
|
31430 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31431 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31432 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31433 </Statistics>
|
jpayne@1
|
31434 </Iteration_stat>
|
jpayne@1
|
31435 </Iteration>
|
jpayne@1
|
31436 <Iteration>
|
jpayne@1
|
31437 <Iteration_iter-num>608</Iteration_iter-num>
|
jpayne@1
|
31438 <Iteration_query-ID>Query_608</Iteration_query-ID>
|
jpayne@1
|
31439 <Iteration_query-def>fljB_z_Salmonella.enterica_IIIb.61:i:z_AY353335_k,z__1500</Iteration_query-def>
|
jpayne@1
|
31440 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
31441 <Iteration_hits>
|
jpayne@1
|
31442 <Hit>
|
jpayne@1
|
31443 <Hit_num>1</Hit_num>
|
jpayne@1
|
31444 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31445 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31446 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31447 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31448 <Hit_hsps>
|
jpayne@1
|
31449 <Hsp>
|
jpayne@1
|
31450 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31451 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
31452 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
31453 <Hsp_evalue>3.05868e-133</Hsp_evalue>
|
jpayne@1
|
31454 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31455 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31456 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31457 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31458 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31459 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31460 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
31461 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
31462 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31463 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31464 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTTTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31465 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31466 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | ||| || | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
31467 </Hsp>
|
jpayne@1
|
31468 </Hit_hsps>
|
jpayne@1
|
31469 </Hit>
|
jpayne@1
|
31470 </Iteration_hits>
|
jpayne@1
|
31471 <Iteration_stat>
|
jpayne@1
|
31472 <Statistics>
|
jpayne@1
|
31473 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31474 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31475 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31476 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
31477 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31478 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31479 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31480 </Statistics>
|
jpayne@1
|
31481 </Iteration_stat>
|
jpayne@1
|
31482 </Iteration>
|
jpayne@1
|
31483 <Iteration>
|
jpayne@1
|
31484 <Iteration_iter-num>609</Iteration_iter-num>
|
jpayne@1
|
31485 <Iteration_query-ID>Query_609</Iteration_query-ID>
|
jpayne@1
|
31486 <Iteration_query-def>fljB_z_Salmonella.enterica_IIIb.48:i:z_AY353336_k,z__1500</Iteration_query-def>
|
jpayne@1
|
31487 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
31488 <Iteration_hits>
|
jpayne@1
|
31489 <Hit>
|
jpayne@1
|
31490 <Hit_num>1</Hit_num>
|
jpayne@1
|
31491 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31492 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31493 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31494 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31495 <Hit_hsps>
|
jpayne@1
|
31496 <Hsp>
|
jpayne@1
|
31497 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31498 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
31499 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
31500 <Hsp_evalue>3.05868e-133</Hsp_evalue>
|
jpayne@1
|
31501 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31502 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31503 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31504 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31505 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31506 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31507 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
31508 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
31509 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31510 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31511 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTTTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31512 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31513 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | ||| || | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
31514 </Hsp>
|
jpayne@1
|
31515 </Hit_hsps>
|
jpayne@1
|
31516 </Hit>
|
jpayne@1
|
31517 </Iteration_hits>
|
jpayne@1
|
31518 <Iteration_stat>
|
jpayne@1
|
31519 <Statistics>
|
jpayne@1
|
31520 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31521 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31522 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31523 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
31524 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31525 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31526 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31527 </Statistics>
|
jpayne@1
|
31528 </Iteration_stat>
|
jpayne@1
|
31529 </Iteration>
|
jpayne@1
|
31530 <Iteration>
|
jpayne@1
|
31531 <Iteration_iter-num>610</Iteration_iter-num>
|
jpayne@1
|
31532 <Iteration_query-ID>Query_610</Iteration_query-ID>
|
jpayne@1
|
31533 <Iteration_query-def>fljB_z_Salmonella.enterica_IIIb.50:k:z_AY353337_k,z__1500</Iteration_query-def>
|
jpayne@1
|
31534 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
31535 <Iteration_hits>
|
jpayne@1
|
31536 <Hit>
|
jpayne@1
|
31537 <Hit_num>1</Hit_num>
|
jpayne@1
|
31538 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31539 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31540 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31541 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31542 <Hit_hsps>
|
jpayne@1
|
31543 <Hsp>
|
jpayne@1
|
31544 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31545 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
31546 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
31547 <Hsp_evalue>3.05868e-133</Hsp_evalue>
|
jpayne@1
|
31548 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31549 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31550 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31551 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31552 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31553 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31554 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
31555 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
31556 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31557 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31558 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTTTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31559 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31560 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | ||| || | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
31561 </Hsp>
|
jpayne@1
|
31562 </Hit_hsps>
|
jpayne@1
|
31563 </Hit>
|
jpayne@1
|
31564 </Iteration_hits>
|
jpayne@1
|
31565 <Iteration_stat>
|
jpayne@1
|
31566 <Statistics>
|
jpayne@1
|
31567 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31568 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31569 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31570 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
31571 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31572 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31573 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31574 </Statistics>
|
jpayne@1
|
31575 </Iteration_stat>
|
jpayne@1
|
31576 </Iteration>
|
jpayne@1
|
31577 <Iteration>
|
jpayne@1
|
31578 <Iteration_iter-num>611</Iteration_iter-num>
|
jpayne@1
|
31579 <Iteration_query-ID>Query_611</Iteration_query-ID>
|
jpayne@1
|
31580 <Iteration_query-def>fljB_z_Salmonella.enterica_IIIb.53:z:1,5,7_AY353338_k,z__1500</Iteration_query-def>
|
jpayne@1
|
31581 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
31582 <Iteration_hits>
|
jpayne@1
|
31583 <Hit>
|
jpayne@1
|
31584 <Hit_num>1</Hit_num>
|
jpayne@1
|
31585 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31586 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31587 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31588 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31589 <Hit_hsps>
|
jpayne@1
|
31590 <Hsp>
|
jpayne@1
|
31591 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31592 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
31593 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
31594 <Hsp_evalue>3.05868e-133</Hsp_evalue>
|
jpayne@1
|
31595 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31596 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31597 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31598 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31599 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31600 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31601 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
31602 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
31603 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31604 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31605 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGTTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATTGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31606 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31607 <Hsp_midline>||||||||||| || || || ||||| |||||| || ||||||||||||||||||||||||| |||||| ||||| || ||||||||||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
31608 </Hsp>
|
jpayne@1
|
31609 </Hit_hsps>
|
jpayne@1
|
31610 </Hit>
|
jpayne@1
|
31611 </Iteration_hits>
|
jpayne@1
|
31612 <Iteration_stat>
|
jpayne@1
|
31613 <Statistics>
|
jpayne@1
|
31614 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31615 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31616 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31617 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
31618 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31619 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31620 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31621 </Statistics>
|
jpayne@1
|
31622 </Iteration_stat>
|
jpayne@1
|
31623 </Iteration>
|
jpayne@1
|
31624 <Iteration>
|
jpayne@1
|
31625 <Iteration_iter-num>612</Iteration_iter-num>
|
jpayne@1
|
31626 <Iteration_query-ID>Query_612</Iteration_query-ID>
|
jpayne@1
|
31627 <Iteration_query-def>fljB_z_Salmonella.enterica_IIIb.48:z:1,5,7_AY353339_k,z__1500</Iteration_query-def>
|
jpayne@1
|
31628 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
31629 <Iteration_hits>
|
jpayne@1
|
31630 <Hit>
|
jpayne@1
|
31631 <Hit_num>1</Hit_num>
|
jpayne@1
|
31632 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31633 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31634 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31635 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31636 <Hit_hsps>
|
jpayne@1
|
31637 <Hsp>
|
jpayne@1
|
31638 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31639 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
31640 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
31641 <Hsp_evalue>1.42306e-131</Hsp_evalue>
|
jpayne@1
|
31642 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31643 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31644 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31645 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31646 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31647 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31648 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
31649 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
31650 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31651 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31652 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGTTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31653 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31654 <Hsp_midline>||||||||||| || || || ||||| |||||| || ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
31655 </Hsp>
|
jpayne@1
|
31656 </Hit_hsps>
|
jpayne@1
|
31657 </Hit>
|
jpayne@1
|
31658 </Iteration_hits>
|
jpayne@1
|
31659 <Iteration_stat>
|
jpayne@1
|
31660 <Statistics>
|
jpayne@1
|
31661 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31662 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31663 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31664 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
31665 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31666 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31667 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31668 </Statistics>
|
jpayne@1
|
31669 </Iteration_stat>
|
jpayne@1
|
31670 </Iteration>
|
jpayne@1
|
31671 <Iteration>
|
jpayne@1
|
31672 <Iteration_iter-num>613</Iteration_iter-num>
|
jpayne@1
|
31673 <Iteration_query-ID>Query_613</Iteration_query-ID>
|
jpayne@1
|
31674 <Iteration_query-def>fljB_z35_Salmonella.enterica_Tamilnadu_AY353340_other.z35__1488</Iteration_query-def>
|
jpayne@1
|
31675 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
31676 <Iteration_hits>
|
jpayne@1
|
31677 <Hit>
|
jpayne@1
|
31678 <Hit_num>1</Hit_num>
|
jpayne@1
|
31679 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31680 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31681 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31682 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31683 <Hit_hsps>
|
jpayne@1
|
31684 <Hsp>
|
jpayne@1
|
31685 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31686 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
31687 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
31688 <Hsp_evalue>1.42156e-126</Hsp_evalue>
|
jpayne@1
|
31689 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31690 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31691 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31692 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31693 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31694 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31695 <Hsp_identity>401</Hsp_identity>
|
jpayne@1
|
31696 <Hsp_positive>401</Hsp_positive>
|
jpayne@1
|
31697 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31698 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31699 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGCGTGCGTGAACTGGCAGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTTGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACCCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAATGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31700 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31701 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | |||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || || ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||||||||||||||| |||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || ||||| || || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || || || |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
31702 </Hsp>
|
jpayne@1
|
31703 </Hit_hsps>
|
jpayne@1
|
31704 </Hit>
|
jpayne@1
|
31705 </Iteration_hits>
|
jpayne@1
|
31706 <Iteration_stat>
|
jpayne@1
|
31707 <Statistics>
|
jpayne@1
|
31708 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31709 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31710 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31711 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
31712 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31713 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31714 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31715 </Statistics>
|
jpayne@1
|
31716 </Iteration_stat>
|
jpayne@1
|
31717 </Iteration>
|
jpayne@1
|
31718 <Iteration>
|
jpayne@1
|
31719 <Iteration_iter-num>614</Iteration_iter-num>
|
jpayne@1
|
31720 <Iteration_query-ID>Query_614</Iteration_query-ID>
|
jpayne@1
|
31721 <Iteration_query-def>fljB_z35_Salmonella.enterica_Kolar_AY353341_other.z35__1488</Iteration_query-def>
|
jpayne@1
|
31722 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
31723 <Iteration_hits>
|
jpayne@1
|
31724 <Hit>
|
jpayne@1
|
31725 <Hit_num>1</Hit_num>
|
jpayne@1
|
31726 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31727 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31728 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31729 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31730 <Hit_hsps>
|
jpayne@1
|
31731 <Hsp>
|
jpayne@1
|
31732 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31733 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
31734 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
31735 <Hsp_evalue>3.05545e-128</Hsp_evalue>
|
jpayne@1
|
31736 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31737 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31738 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31739 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31740 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31741 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31742 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
31743 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
31744 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31745 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31746 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTTTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGACAGACCCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAATACCCTGACCATCCAGGTTGGTGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31747 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31748 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | |||||||||||||| |||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || || |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||| || || ||||| || ||||||||| | |||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
31749 </Hsp>
|
jpayne@1
|
31750 </Hit_hsps>
|
jpayne@1
|
31751 </Hit>
|
jpayne@1
|
31752 </Iteration_hits>
|
jpayne@1
|
31753 <Iteration_stat>
|
jpayne@1
|
31754 <Statistics>
|
jpayne@1
|
31755 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31756 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31757 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31758 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
31759 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31760 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31761 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31762 </Statistics>
|
jpayne@1
|
31763 </Iteration_stat>
|
jpayne@1
|
31764 </Iteration>
|
jpayne@1
|
31765 <Iteration>
|
jpayne@1
|
31766 <Iteration_iter-num>615</Iteration_iter-num>
|
jpayne@1
|
31767 <Iteration_query-ID>Query_615</Iteration_query-ID>
|
jpayne@1
|
31768 <Iteration_query-def>fljB_z35_Salmonella.enterica_III.b.65:z52:z35_AY353342_other.z35__1488</Iteration_query-def>
|
jpayne@1
|
31769 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
31770 <Iteration_hits>
|
jpayne@1
|
31771 <Hit>
|
jpayne@1
|
31772 <Hit_num>1</Hit_num>
|
jpayne@1
|
31773 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31774 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31775 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31776 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31777 <Hit_hsps>
|
jpayne@1
|
31778 <Hsp>
|
jpayne@1
|
31779 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31780 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
31781 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
31782 <Hsp_evalue>3.03391e-133</Hsp_evalue>
|
jpayne@1
|
31783 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31784 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31785 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31786 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31787 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31788 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31789 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
31790 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
31791 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31792 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31793 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTTTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31794 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31795 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | ||| || | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
31796 </Hsp>
|
jpayne@1
|
31797 </Hit_hsps>
|
jpayne@1
|
31798 </Hit>
|
jpayne@1
|
31799 </Iteration_hits>
|
jpayne@1
|
31800 <Iteration_stat>
|
jpayne@1
|
31801 <Statistics>
|
jpayne@1
|
31802 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31803 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31804 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31805 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
31806 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31807 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31808 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31809 </Statistics>
|
jpayne@1
|
31810 </Iteration_stat>
|
jpayne@1
|
31811 </Iteration>
|
jpayne@1
|
31812 <Iteration>
|
jpayne@1
|
31813 <Iteration_iter-num>616</Iteration_iter-num>
|
jpayne@1
|
31814 <Iteration_query-ID>Query_616</Iteration_query-ID>
|
jpayne@1
|
31815 <Iteration_query-def>fljB_z35_Salmonella.enterica_IIIb.35:z52:z35_AY353343_other.z35__1488</Iteration_query-def>
|
jpayne@1
|
31816 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
31817 <Iteration_hits>
|
jpayne@1
|
31818 <Hit>
|
jpayne@1
|
31819 <Hit_num>1</Hit_num>
|
jpayne@1
|
31820 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31821 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31822 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31823 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31824 <Hit_hsps>
|
jpayne@1
|
31825 <Hsp>
|
jpayne@1
|
31826 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31827 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
31828 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
31829 <Hsp_evalue>6.52096e-135</Hsp_evalue>
|
jpayne@1
|
31830 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31831 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31832 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31833 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31834 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31835 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31836 <Hsp_identity>406</Hsp_identity>
|
jpayne@1
|
31837 <Hsp_positive>406</Hsp_positive>
|
jpayne@1
|
31838 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31839 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31840 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31841 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31842 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | ||||||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
31843 </Hsp>
|
jpayne@1
|
31844 </Hit_hsps>
|
jpayne@1
|
31845 </Hit>
|
jpayne@1
|
31846 </Iteration_hits>
|
jpayne@1
|
31847 <Iteration_stat>
|
jpayne@1
|
31848 <Statistics>
|
jpayne@1
|
31849 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31850 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31851 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31852 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
31853 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31854 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31855 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31856 </Statistics>
|
jpayne@1
|
31857 </Iteration_stat>
|
jpayne@1
|
31858 </Iteration>
|
jpayne@1
|
31859 <Iteration>
|
jpayne@1
|
31860 <Iteration_iter-num>617</Iteration_iter-num>
|
jpayne@1
|
31861 <Iteration_query-ID>Query_617</Iteration_query-ID>
|
jpayne@1
|
31862 <Iteration_query-def>fljB_z35_Salmonella.enterica_IIIb.38:z35:z52_AY353344_other.z35__1488</Iteration_query-def>
|
jpayne@1
|
31863 <Iteration_query-len>1488</Iteration_query-len>
|
jpayne@1
|
31864 <Iteration_hits>
|
jpayne@1
|
31865 <Hit>
|
jpayne@1
|
31866 <Hit_num>1</Hit_num>
|
jpayne@1
|
31867 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31868 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31869 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31870 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31871 <Hit_hsps>
|
jpayne@1
|
31872 <Hsp>
|
jpayne@1
|
31873 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31874 <Hsp_bit-score>462.783</Hsp_bit-score>
|
jpayne@1
|
31875 <Hsp_score>250</Hsp_score>
|
jpayne@1
|
31876 <Hsp_evalue>3.92461e-132</Hsp_evalue>
|
jpayne@1
|
31877 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31878 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31879 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31880 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31881 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31882 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31883 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
31884 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
31885 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31886 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31887 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAWTCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTTTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31888 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31889 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||| | |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | ||| || | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
31890 </Hsp>
|
jpayne@1
|
31891 </Hit_hsps>
|
jpayne@1
|
31892 </Hit>
|
jpayne@1
|
31893 </Iteration_hits>
|
jpayne@1
|
31894 <Iteration_stat>
|
jpayne@1
|
31895 <Statistics>
|
jpayne@1
|
31896 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31897 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31898 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31899 <Statistics_eff-space>80403120</Statistics_eff-space>
|
jpayne@1
|
31900 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31901 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31902 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31903 </Statistics>
|
jpayne@1
|
31904 </Iteration_stat>
|
jpayne@1
|
31905 </Iteration>
|
jpayne@1
|
31906 <Iteration>
|
jpayne@1
|
31907 <Iteration_iter-num>618</Iteration_iter-num>
|
jpayne@1
|
31908 <Iteration_query-ID>Query_618</Iteration_query-ID>
|
jpayne@1
|
31909 <Iteration_query-def>fljB_z39_Salmonella.enterica_II.43:d:z39_AY353345_other.z39__1500</Iteration_query-def>
|
jpayne@1
|
31910 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
31911 <Iteration_hits>
|
jpayne@1
|
31912 <Hit>
|
jpayne@1
|
31913 <Hit_num>1</Hit_num>
|
jpayne@1
|
31914 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31915 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31916 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31917 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31918 <Hit_hsps>
|
jpayne@1
|
31919 <Hsp>
|
jpayne@1
|
31920 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31921 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
31922 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
31923 <Hsp_evalue>3.10226e-123</Hsp_evalue>
|
jpayne@1
|
31924 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31925 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31926 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31927 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31928 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31929 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31930 <Hsp_identity>399</Hsp_identity>
|
jpayne@1
|
31931 <Hsp_positive>399</Hsp_positive>
|
jpayne@1
|
31932 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31933 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31934 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACGCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAATAACCTGCAGCGTGTACGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31935 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31936 <Hsp_midline>||||||||||| || || || ||||| ||||||||||||||||||||||||||||||||||| ||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || || ||||||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
31937 </Hsp>
|
jpayne@1
|
31938 </Hit_hsps>
|
jpayne@1
|
31939 </Hit>
|
jpayne@1
|
31940 </Iteration_hits>
|
jpayne@1
|
31941 <Iteration_stat>
|
jpayne@1
|
31942 <Statistics>
|
jpayne@1
|
31943 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31944 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31945 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31946 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
31947 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31948 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31949 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31950 </Statistics>
|
jpayne@1
|
31951 </Iteration_stat>
|
jpayne@1
|
31952 </Iteration>
|
jpayne@1
|
31953 <Iteration>
|
jpayne@1
|
31954 <Iteration_iter-num>619</Iteration_iter-num>
|
jpayne@1
|
31955 <Iteration_query-ID>Query_619</Iteration_query-ID>
|
jpayne@1
|
31956 <Iteration_query-def>fljB_z39_Salmonella.enterica_II.4,12:g,m,t:z39_AY353346_other.z39__1500</Iteration_query-def>
|
jpayne@1
|
31957 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
31958 <Iteration_hits>
|
jpayne@1
|
31959 <Hit>
|
jpayne@1
|
31960 <Hit_num>1</Hit_num>
|
jpayne@1
|
31961 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
31962 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
31963 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
31964 <Hit_len>1962</Hit_len>
|
jpayne@1
|
31965 <Hit_hsps>
|
jpayne@1
|
31966 <Hsp>
|
jpayne@1
|
31967 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
31968 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
31969 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
31970 <Hsp_evalue>6.62087e-130</Hsp_evalue>
|
jpayne@1
|
31971 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
31972 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
31973 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
31974 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
31975 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
31976 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
31977 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
31978 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
31979 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
31980 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
31981 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTACAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATTGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
31982 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
31983 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||||| |||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| ||| |||||||||</Hsp_midline>
|
jpayne@1
|
31984 </Hsp>
|
jpayne@1
|
31985 </Hit_hsps>
|
jpayne@1
|
31986 </Hit>
|
jpayne@1
|
31987 </Iteration_hits>
|
jpayne@1
|
31988 <Iteration_stat>
|
jpayne@1
|
31989 <Statistics>
|
jpayne@1
|
31990 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
31991 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
31992 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
31993 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
31994 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
31995 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
31996 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
31997 </Statistics>
|
jpayne@1
|
31998 </Iteration_stat>
|
jpayne@1
|
31999 </Iteration>
|
jpayne@1
|
32000 <Iteration>
|
jpayne@1
|
32001 <Iteration_iter-num>620</Iteration_iter-num>
|
jpayne@1
|
32002 <Iteration_query-ID>Query_620</Iteration_query-ID>
|
jpayne@1
|
32003 <Iteration_query-def>fljB_z39_Salmonella.enterica_II.52:z39:1,5,7_AY353347_other.z39__1500</Iteration_query-def>
|
jpayne@1
|
32004 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
32005 <Iteration_hits>
|
jpayne@1
|
32006 <Hit>
|
jpayne@1
|
32007 <Hit_num>1</Hit_num>
|
jpayne@1
|
32008 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32009 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32010 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32011 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32012 <Hit_hsps>
|
jpayne@1
|
32013 <Hsp>
|
jpayne@1
|
32014 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32015 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
32016 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
32017 <Hsp_evalue>6.66788e-125</Hsp_evalue>
|
jpayne@1
|
32018 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32019 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32020 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32021 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32022 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32023 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32024 <Hsp_identity>400</Hsp_identity>
|
jpayne@1
|
32025 <Hsp_positive>400</Hsp_positive>
|
jpayne@1
|
32026 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32027 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32028 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGCCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAATAACCTGCAGCGTGTACGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32029 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32030 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32031 </Hsp>
|
jpayne@1
|
32032 </Hit_hsps>
|
jpayne@1
|
32033 </Hit>
|
jpayne@1
|
32034 </Iteration_hits>
|
jpayne@1
|
32035 <Iteration_stat>
|
jpayne@1
|
32036 <Statistics>
|
jpayne@1
|
32037 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32038 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32039 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32040 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
32041 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32042 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32043 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32044 </Statistics>
|
jpayne@1
|
32045 </Iteration_stat>
|
jpayne@1
|
32046 </Iteration>
|
jpayne@1
|
32047 <Iteration>
|
jpayne@1
|
32048 <Iteration_iter-num>621</Iteration_iter-num>
|
jpayne@1
|
32049 <Iteration_query-ID>Query_621</Iteration_query-ID>
|
jpayne@1
|
32050 <Iteration_query-def>fljB_z39_Salmonella.enterica_II.51:l,z28:z39_AY353348_other.z39__1500</Iteration_query-def>
|
jpayne@1
|
32051 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
32052 <Iteration_hits>
|
jpayne@1
|
32053 <Hit>
|
jpayne@1
|
32054 <Hit_num>1</Hit_num>
|
jpayne@1
|
32055 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32056 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32057 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32058 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32059 <Hit_hsps>
|
jpayne@1
|
32060 <Hsp>
|
jpayne@1
|
32061 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32062 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
32063 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
32064 <Hsp_evalue>6.66788e-125</Hsp_evalue>
|
jpayne@1
|
32065 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32066 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32067 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32068 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32069 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32070 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32071 <Hsp_identity>400</Hsp_identity>
|
jpayne@1
|
32072 <Hsp_positive>400</Hsp_positive>
|
jpayne@1
|
32073 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32074 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32075 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGCCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAATAACCTGCAGCGTGTACGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32076 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32077 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || || ||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||| |||||||||||||| ||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32078 </Hsp>
|
jpayne@1
|
32079 </Hit_hsps>
|
jpayne@1
|
32080 </Hit>
|
jpayne@1
|
32081 </Iteration_hits>
|
jpayne@1
|
32082 <Iteration_stat>
|
jpayne@1
|
32083 <Statistics>
|
jpayne@1
|
32084 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32085 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32086 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32087 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
32088 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32089 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32090 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32091 </Statistics>
|
jpayne@1
|
32092 </Iteration_stat>
|
jpayne@1
|
32093 </Iteration>
|
jpayne@1
|
32094 <Iteration>
|
jpayne@1
|
32095 <Iteration_iter-num>622</Iteration_iter-num>
|
jpayne@1
|
32096 <Iteration_query-ID>Query_622</Iteration_query-ID>
|
jpayne@1
|
32097 <Iteration_query-def>fljB_z39_Salmonella.enterica_II.6,7:z39:1,5,7_AY353349_other.z39__1500</Iteration_query-def>
|
jpayne@1
|
32098 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
32099 <Iteration_hits>
|
jpayne@1
|
32100 </Iteration_hits>
|
jpayne@1
|
32101 <Iteration_stat>
|
jpayne@1
|
32102 <Statistics>
|
jpayne@1
|
32103 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32104 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32105 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32106 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
32107 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32108 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32109 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32110 </Statistics>
|
jpayne@1
|
32111 </Iteration_stat>
|
jpayne@1
|
32112 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
32113 </Iteration>
|
jpayne@1
|
32114 <Iteration>
|
jpayne@1
|
32115 <Iteration_iter-num>623</Iteration_iter-num>
|
jpayne@1
|
32116 <Iteration_query-ID>Query_623</Iteration_query-ID>
|
jpayne@1
|
32117 <Iteration_query-def>fljB_z39_Salmonella.enterica_IIIb.40:z39:1,6_AY353350_other.z39__1500</Iteration_query-def>
|
jpayne@1
|
32118 <Iteration_query-len>1500</Iteration_query-len>
|
jpayne@1
|
32119 <Iteration_hits>
|
jpayne@1
|
32120 <Hit>
|
jpayne@1
|
32121 <Hit_num>1</Hit_num>
|
jpayne@1
|
32122 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32123 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32124 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32125 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32126 <Hit_hsps>
|
jpayne@1
|
32127 <Hsp>
|
jpayne@1
|
32128 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32129 <Hsp_bit-score>433.236</Hsp_bit-score>
|
jpayne@1
|
32130 <Hsp_score>234</Hsp_score>
|
jpayne@1
|
32131 <Hsp_evalue>3.10226e-123</Hsp_evalue>
|
jpayne@1
|
32132 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32133 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32134 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32135 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32136 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32137 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32138 <Hsp_identity>399</Hsp_identity>
|
jpayne@1
|
32139 <Hsp_positive>399</Hsp_positive>
|
jpayne@1
|
32140 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32141 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32142 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCTGCTCTGGGCACCGCTATCGAGCGCCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACGCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32143 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32144 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| ||||| | ||| | ||||||| ||||| ||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || |||||||| ||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32145 </Hsp>
|
jpayne@1
|
32146 </Hit_hsps>
|
jpayne@1
|
32147 </Hit>
|
jpayne@1
|
32148 </Iteration_hits>
|
jpayne@1
|
32149 <Iteration_stat>
|
jpayne@1
|
32150 <Statistics>
|
jpayne@1
|
32151 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32152 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32153 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32154 <Statistics_eff-space>81059472</Statistics_eff-space>
|
jpayne@1
|
32155 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32156 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32157 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32158 </Statistics>
|
jpayne@1
|
32159 </Iteration_stat>
|
jpayne@1
|
32160 </Iteration>
|
jpayne@1
|
32161 <Iteration>
|
jpayne@1
|
32162 <Iteration_iter-num>624</Iteration_iter-num>
|
jpayne@1
|
32163 <Iteration_query-ID>Query_624</Iteration_query-ID>
|
jpayne@1
|
32164 <Iteration_query-def>fljB_z6_Salmonella.enterica_Bere_AY353352_k,z__1503</Iteration_query-def>
|
jpayne@1
|
32165 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
32166 <Iteration_hits>
|
jpayne@1
|
32167 <Hit>
|
jpayne@1
|
32168 <Hit_num>1</Hit_num>
|
jpayne@1
|
32169 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32170 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32171 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32172 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32173 <Hit_hsps>
|
jpayne@1
|
32174 <Hsp>
|
jpayne@1
|
32175 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32176 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
32177 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
32178 <Hsp_evalue>1.42594e-131</Hsp_evalue>
|
jpayne@1
|
32179 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32180 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32181 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32182 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32183 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32184 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32185 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
32186 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
32187 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32188 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32189 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAAACTACTGAAGGTGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32190 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32191 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || || |||||||||||||||||||||||||||||||||||||| |||||||||||||| || ||||||||||||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32192 </Hsp>
|
jpayne@1
|
32193 </Hit_hsps>
|
jpayne@1
|
32194 </Hit>
|
jpayne@1
|
32195 </Iteration_hits>
|
jpayne@1
|
32196 <Iteration_stat>
|
jpayne@1
|
32197 <Statistics>
|
jpayne@1
|
32198 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32199 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32200 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32201 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
32202 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32203 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32204 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32205 </Statistics>
|
jpayne@1
|
32206 </Iteration_stat>
|
jpayne@1
|
32207 </Iteration>
|
jpayne@1
|
32208 <Iteration>
|
jpayne@1
|
32209 <Iteration_iter-num>625</Iteration_iter-num>
|
jpayne@1
|
32210 <Iteration_query-ID>Query_625</Iteration_query-ID>
|
jpayne@1
|
32211 <Iteration_query-def>fljB_z6_Salmonella.enterica_Weltevreden_AY353353_k,z__1503</Iteration_query-def>
|
jpayne@1
|
32212 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
32213 <Iteration_hits>
|
jpayne@1
|
32214 <Hit>
|
jpayne@1
|
32215 <Hit_num>1</Hit_num>
|
jpayne@1
|
32216 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32217 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32218 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32219 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32220 <Hit_hsps>
|
jpayne@1
|
32221 <Hsp>
|
jpayne@1
|
32222 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32223 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
32224 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
32225 <Hsp_evalue>6.63427e-130</Hsp_evalue>
|
jpayne@1
|
32226 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32227 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32228 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32229 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32230 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32231 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32232 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
32233 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
32234 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32235 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32236 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32237 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32238 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32239 </Hsp>
|
jpayne@1
|
32240 </Hit_hsps>
|
jpayne@1
|
32241 </Hit>
|
jpayne@1
|
32242 </Iteration_hits>
|
jpayne@1
|
32243 <Iteration_stat>
|
jpayne@1
|
32244 <Statistics>
|
jpayne@1
|
32245 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32246 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32247 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32248 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
32249 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32250 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32251 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32252 </Statistics>
|
jpayne@1
|
32253 </Iteration_stat>
|
jpayne@1
|
32254 </Iteration>
|
jpayne@1
|
32255 <Iteration>
|
jpayne@1
|
32256 <Iteration_iter-num>626</Iteration_iter-num>
|
jpayne@1
|
32257 <Iteration_query-ID>Query_626</Iteration_query-ID>
|
jpayne@1
|
32258 <Iteration_query-def>fljB_1,6_Salmonella.enterica_Poona_AY353355_1__1521</Iteration_query-def>
|
jpayne@1
|
32259 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
32260 <Iteration_hits>
|
jpayne@1
|
32261 <Hit>
|
jpayne@1
|
32262 <Hit_num>1</Hit_num>
|
jpayne@1
|
32263 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32264 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32265 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32266 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32267 <Hit_hsps>
|
jpayne@1
|
32268 <Hsp>
|
jpayne@1
|
32269 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32270 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
32271 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
32272 <Hsp_evalue>3.12404e-128</Hsp_evalue>
|
jpayne@1
|
32273 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32274 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32275 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32276 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32277 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32278 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32279 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
32280 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
32281 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32282 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32283 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCGCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32284 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32285 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32286 </Hsp>
|
jpayne@1
|
32287 </Hit_hsps>
|
jpayne@1
|
32288 </Hit>
|
jpayne@1
|
32289 </Iteration_hits>
|
jpayne@1
|
32290 <Iteration_stat>
|
jpayne@1
|
32291 <Statistics>
|
jpayne@1
|
32292 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32293 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32294 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32295 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
32296 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32297 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32298 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32299 </Statistics>
|
jpayne@1
|
32300 </Iteration_stat>
|
jpayne@1
|
32301 </Iteration>
|
jpayne@1
|
32302 <Iteration>
|
jpayne@1
|
32303 <Iteration_iter-num>627</Iteration_iter-num>
|
jpayne@1
|
32304 <Iteration_query-ID>Query_627</Iteration_query-ID>
|
jpayne@1
|
32305 <Iteration_query-def>fljB_1,6_Anatumstr_AOZZ01000116_1__1511</Iteration_query-def>
|
jpayne@1
|
32306 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
32307 <Iteration_hits>
|
jpayne@1
|
32308 <Hit>
|
jpayne@1
|
32309 <Hit_num>1</Hit_num>
|
jpayne@1
|
32310 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32311 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32312 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32313 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32314 <Hit_hsps>
|
jpayne@1
|
32315 <Hsp>
|
jpayne@1
|
32316 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32317 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
32318 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
32319 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
32320 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32321 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32322 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32323 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32324 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32325 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32326 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
32327 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
32328 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
32329 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
32330 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32331 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32332 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32333 </Hsp>
|
jpayne@1
|
32334 <Hsp>
|
jpayne@1
|
32335 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
32336 <Hsp_bit-score>172.859</Hsp_bit-score>
|
jpayne@1
|
32337 <Hsp_score>93</Hsp_score>
|
jpayne@1
|
32338 <Hsp_evalue>7.52243e-45</Hsp_evalue>
|
jpayne@1
|
32339 <Hsp_query-from>1324</Hsp_query-from>
|
jpayne@1
|
32340 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
32341 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
32342 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
32343 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32344 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32345 <Hsp_identity>156</Hsp_identity>
|
jpayne@1
|
32346 <Hsp_positive>156</Hsp_positive>
|
jpayne@1
|
32347 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32348 <Hsp_align-len>187</Hsp_align-len>
|
jpayne@1
|
32349 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTCCCGCAGAACGTGCTGTCT</Hsp_qseq>
|
jpayne@1
|
32350 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
32351 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || |||</Hsp_midline>
|
jpayne@1
|
32352 </Hsp>
|
jpayne@1
|
32353 </Hit_hsps>
|
jpayne@1
|
32354 </Hit>
|
jpayne@1
|
32355 </Iteration_hits>
|
jpayne@1
|
32356 <Iteration_stat>
|
jpayne@1
|
32357 <Statistics>
|
jpayne@1
|
32358 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32359 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32360 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32361 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
32362 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32363 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32364 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32365 </Statistics>
|
jpayne@1
|
32366 </Iteration_stat>
|
jpayne@1
|
32367 </Iteration>
|
jpayne@1
|
32368 <Iteration>
|
jpayne@1
|
32369 <Iteration_iter-num>628</Iteration_iter-num>
|
jpayne@1
|
32370 <Iteration_query-ID>Query_628</Iteration_query-ID>
|
jpayne@1
|
32371 <Iteration_query-def>fljB_1,6_Anatumstr_APAA01000114_1__1511</Iteration_query-def>
|
jpayne@1
|
32372 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
32373 <Iteration_hits>
|
jpayne@1
|
32374 <Hit>
|
jpayne@1
|
32375 <Hit_num>1</Hit_num>
|
jpayne@1
|
32376 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32377 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32378 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32379 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32380 <Hit_hsps>
|
jpayne@1
|
32381 <Hsp>
|
jpayne@1
|
32382 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32383 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
32384 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
32385 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
32386 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32387 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32388 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32389 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32390 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32391 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32392 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
32393 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
32394 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
32395 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
32396 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32397 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32398 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32399 </Hsp>
|
jpayne@1
|
32400 <Hsp>
|
jpayne@1
|
32401 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
32402 <Hsp_bit-score>172.859</Hsp_bit-score>
|
jpayne@1
|
32403 <Hsp_score>93</Hsp_score>
|
jpayne@1
|
32404 <Hsp_evalue>7.52243e-45</Hsp_evalue>
|
jpayne@1
|
32405 <Hsp_query-from>1324</Hsp_query-from>
|
jpayne@1
|
32406 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
32407 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
32408 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
32409 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32410 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32411 <Hsp_identity>156</Hsp_identity>
|
jpayne@1
|
32412 <Hsp_positive>156</Hsp_positive>
|
jpayne@1
|
32413 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32414 <Hsp_align-len>187</Hsp_align-len>
|
jpayne@1
|
32415 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTCCCGCAGAACGTGCTGTCT</Hsp_qseq>
|
jpayne@1
|
32416 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
32417 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || |||</Hsp_midline>
|
jpayne@1
|
32418 </Hsp>
|
jpayne@1
|
32419 </Hit_hsps>
|
jpayne@1
|
32420 </Hit>
|
jpayne@1
|
32421 </Iteration_hits>
|
jpayne@1
|
32422 <Iteration_stat>
|
jpayne@1
|
32423 <Statistics>
|
jpayne@1
|
32424 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32425 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32426 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32427 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
32428 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32429 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32430 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32431 </Statistics>
|
jpayne@1
|
32432 </Iteration_stat>
|
jpayne@1
|
32433 </Iteration>
|
jpayne@1
|
32434 <Iteration>
|
jpayne@1
|
32435 <Iteration_iter-num>629</Iteration_iter-num>
|
jpayne@1
|
32436 <Iteration_query-ID>Query_629</Iteration_query-ID>
|
jpayne@1
|
32437 <Iteration_query-def>fljB_1,5_Bareillystr_AOZP01000315_1__1511</Iteration_query-def>
|
jpayne@1
|
32438 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
32439 <Iteration_hits>
|
jpayne@1
|
32440 <Hit>
|
jpayne@1
|
32441 <Hit_num>1</Hit_num>
|
jpayne@1
|
32442 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32443 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32444 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32445 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32446 <Hit_hsps>
|
jpayne@1
|
32447 <Hsp>
|
jpayne@1
|
32448 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32449 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
32450 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
32451 <Hsp_evalue>6.71737e-125</Hsp_evalue>
|
jpayne@1
|
32452 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32453 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32454 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32455 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32456 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32457 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32458 <Hsp_identity>400</Hsp_identity>
|
jpayne@1
|
32459 <Hsp_positive>400</Hsp_positive>
|
jpayne@1
|
32460 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32461 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32462 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGTGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32463 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32464 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || ||||||||||||||||| |||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32465 </Hsp>
|
jpayne@1
|
32466 </Hit_hsps>
|
jpayne@1
|
32467 </Hit>
|
jpayne@1
|
32468 </Iteration_hits>
|
jpayne@1
|
32469 <Iteration_stat>
|
jpayne@1
|
32470 <Statistics>
|
jpayne@1
|
32471 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32472 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32473 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32474 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
32475 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32476 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32477 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32478 </Statistics>
|
jpayne@1
|
32479 </Iteration_stat>
|
jpayne@1
|
32480 </Iteration>
|
jpayne@1
|
32481 <Iteration>
|
jpayne@1
|
32482 <Iteration_iter-num>630</Iteration_iter-num>
|
jpayne@1
|
32483 <Iteration_query-ID>Query_630</Iteration_query-ID>
|
jpayne@1
|
32484 <Iteration_query-def>fljB_e,n,z15_Braenderupstr_AOZM01000055_e__1496</Iteration_query-def>
|
jpayne@1
|
32485 <Iteration_query-len>1496</Iteration_query-len>
|
jpayne@1
|
32486 <Iteration_hits>
|
jpayne@1
|
32487 <Hit>
|
jpayne@1
|
32488 <Hit_num>1</Hit_num>
|
jpayne@1
|
32489 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32490 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32491 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32492 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32493 <Hit_hsps>
|
jpayne@1
|
32494 <Hsp>
|
jpayne@1
|
32495 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32496 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
32497 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
32498 <Hsp_evalue>3.07208e-128</Hsp_evalue>
|
jpayne@1
|
32499 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32500 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32501 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32502 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32503 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32504 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32505 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
32506 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
32507 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32508 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32509 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32510 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32511 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32512 </Hsp>
|
jpayne@1
|
32513 </Hit_hsps>
|
jpayne@1
|
32514 </Hit>
|
jpayne@1
|
32515 </Iteration_hits>
|
jpayne@1
|
32516 <Iteration_stat>
|
jpayne@1
|
32517 <Statistics>
|
jpayne@1
|
32518 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32519 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32520 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32521 <Statistics_eff-space>80840688</Statistics_eff-space>
|
jpayne@1
|
32522 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32523 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32524 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32525 </Statistics>
|
jpayne@1
|
32526 </Iteration_stat>
|
jpayne@1
|
32527 </Iteration>
|
jpayne@1
|
32528 <Iteration>
|
jpayne@1
|
32529 <Iteration_iter-num>631</Iteration_iter-num>
|
jpayne@1
|
32530 <Iteration_query-ID>Query_631</Iteration_query-ID>
|
jpayne@1
|
32531 <Iteration_query-def>fljB_e,n,x_Chesterstr_AOZI01000020_e__1496</Iteration_query-def>
|
jpayne@1
|
32532 <Iteration_query-len>1496</Iteration_query-len>
|
jpayne@1
|
32533 <Iteration_hits>
|
jpayne@1
|
32534 <Hit>
|
jpayne@1
|
32535 <Hit_num>1</Hit_num>
|
jpayne@1
|
32536 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32537 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32538 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32539 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32540 <Hit_hsps>
|
jpayne@1
|
32541 <Hsp>
|
jpayne@1
|
32542 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32543 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
32544 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
32545 <Hsp_evalue>1.4293e-126</Hsp_evalue>
|
jpayne@1
|
32546 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32547 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32548 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32549 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32550 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32551 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32552 <Hsp_identity>401</Hsp_identity>
|
jpayne@1
|
32553 <Hsp_positive>401</Hsp_positive>
|
jpayne@1
|
32554 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32555 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32556 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32557 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32558 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32559 </Hsp>
|
jpayne@1
|
32560 <Hsp>
|
jpayne@1
|
32561 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
32562 <Hsp_bit-score>172.859</Hsp_bit-score>
|
jpayne@1
|
32563 <Hsp_score>93</Hsp_score>
|
jpayne@1
|
32564 <Hsp_evalue>7.44685e-45</Hsp_evalue>
|
jpayne@1
|
32565 <Hsp_query-from>1309</Hsp_query-from>
|
jpayne@1
|
32566 <Hsp_query-to>1494</Hsp_query-to>
|
jpayne@1
|
32567 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
32568 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
32569 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32570 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32571 <Hsp_identity>156</Hsp_identity>
|
jpayne@1
|
32572 <Hsp_positive>156</Hsp_positive>
|
jpayne@1
|
32573 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32574 <Hsp_align-len>187</Hsp_align-len>
|
jpayne@1
|
32575 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTCCCGCAGAACGTGCTGTCT</Hsp_qseq>
|
jpayne@1
|
32576 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
32577 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || |||</Hsp_midline>
|
jpayne@1
|
32578 </Hsp>
|
jpayne@1
|
32579 </Hit_hsps>
|
jpayne@1
|
32580 </Hit>
|
jpayne@1
|
32581 </Iteration_hits>
|
jpayne@1
|
32582 <Iteration_stat>
|
jpayne@1
|
32583 <Statistics>
|
jpayne@1
|
32584 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32585 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32586 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32587 <Statistics_eff-space>80840688</Statistics_eff-space>
|
jpayne@1
|
32588 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32589 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32590 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32591 </Statistics>
|
jpayne@1
|
32592 </Iteration_stat>
|
jpayne@1
|
32593 </Iteration>
|
jpayne@1
|
32594 <Iteration>
|
jpayne@1
|
32595 <Iteration_iter-num>632</Iteration_iter-num>
|
jpayne@1
|
32596 <Iteration_query-ID>Query_632</Iteration_query-ID>
|
jpayne@1
|
32597 <Iteration_query-def>fljB_1,7_Gaminarastr_AOZF01000073_1__1511</Iteration_query-def>
|
jpayne@1
|
32598 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
32599 <Iteration_hits>
|
jpayne@1
|
32600 <Hit>
|
jpayne@1
|
32601 <Hit_num>1</Hit_num>
|
jpayne@1
|
32602 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32603 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32604 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32605 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32606 <Hit_hsps>
|
jpayne@1
|
32607 <Hsp>
|
jpayne@1
|
32608 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32609 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
32610 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
32611 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
32612 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32613 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32614 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32615 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32616 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32617 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32618 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
32619 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
32620 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32621 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32622 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCACAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32623 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32624 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32625 </Hsp>
|
jpayne@1
|
32626 </Hit_hsps>
|
jpayne@1
|
32627 </Hit>
|
jpayne@1
|
32628 </Iteration_hits>
|
jpayne@1
|
32629 <Iteration_stat>
|
jpayne@1
|
32630 <Statistics>
|
jpayne@1
|
32631 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32632 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32633 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32634 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
32635 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32636 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32637 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32638 </Statistics>
|
jpayne@1
|
32639 </Iteration_stat>
|
jpayne@1
|
32640 </Iteration>
|
jpayne@1
|
32641 <Iteration>
|
jpayne@1
|
32642 <Iteration_iter-num>633</Iteration_iter-num>
|
jpayne@1
|
32643 <Iteration_query-ID>Query_633</Iteration_query-ID>
|
jpayne@1
|
32644 <Iteration_query-def>fljB_1,7_Givestr_AOZG01000012_1__1511</Iteration_query-def>
|
jpayne@1
|
32645 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
32646 <Iteration_hits>
|
jpayne@1
|
32647 <Hit>
|
jpayne@1
|
32648 <Hit_num>1</Hit_num>
|
jpayne@1
|
32649 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32650 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32651 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32652 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32653 <Hit_hsps>
|
jpayne@1
|
32654 <Hsp>
|
jpayne@1
|
32655 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32656 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
32657 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
32658 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
32659 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32660 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32661 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32662 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32663 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32664 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32665 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
32666 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
32667 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32668 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32669 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCCTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGATGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32670 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32671 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || |||||||||||||||||||| |||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| |||||||||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32672 </Hsp>
|
jpayne@1
|
32673 </Hit_hsps>
|
jpayne@1
|
32674 </Hit>
|
jpayne@1
|
32675 </Iteration_hits>
|
jpayne@1
|
32676 <Iteration_stat>
|
jpayne@1
|
32677 <Statistics>
|
jpayne@1
|
32678 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32679 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32680 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32681 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
32682 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32683 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32684 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32685 </Statistics>
|
jpayne@1
|
32686 </Iteration_stat>
|
jpayne@1
|
32687 </Iteration>
|
jpayne@1
|
32688 <Iteration>
|
jpayne@1
|
32689 <Iteration_iter-num>634</Iteration_iter-num>
|
jpayne@1
|
32690 <Iteration_query-ID>Query_634</Iteration_query-ID>
|
jpayne@1
|
32691 <Iteration_query-def>fljB_e,n,x_Hadarstr_ARYR01000012_e__1496</Iteration_query-def>
|
jpayne@1
|
32692 <Iteration_query-len>1496</Iteration_query-len>
|
jpayne@1
|
32693 <Iteration_hits>
|
jpayne@1
|
32694 <Hit>
|
jpayne@1
|
32695 <Hit_num>1</Hit_num>
|
jpayne@1
|
32696 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32697 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32698 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32699 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32700 <Hit_hsps>
|
jpayne@1
|
32701 <Hsp>
|
jpayne@1
|
32702 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32703 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
32704 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
32705 <Hsp_evalue>6.55645e-135</Hsp_evalue>
|
jpayne@1
|
32706 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32707 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32708 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32709 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32710 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32711 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32712 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
32713 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
32714 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
32715 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
32716 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32717 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32718 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32719 </Hsp>
|
jpayne@1
|
32720 </Hit_hsps>
|
jpayne@1
|
32721 </Hit>
|
jpayne@1
|
32722 </Iteration_hits>
|
jpayne@1
|
32723 <Iteration_stat>
|
jpayne@1
|
32724 <Statistics>
|
jpayne@1
|
32725 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32726 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32727 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32728 <Statistics_eff-space>80840688</Statistics_eff-space>
|
jpayne@1
|
32729 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32730 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32731 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32732 </Statistics>
|
jpayne@1
|
32733 </Iteration_stat>
|
jpayne@1
|
32734 </Iteration>
|
jpayne@1
|
32735 <Iteration>
|
jpayne@1
|
32736 <Iteration_iter-num>635</Iteration_iter-num>
|
jpayne@1
|
32737 <Iteration_query-ID>Query_635</Iteration_query-ID>
|
jpayne@1
|
32738 <Iteration_query-def>fljB_e,n,x_Hadarstr_AOZE01000017_e__1496</Iteration_query-def>
|
jpayne@1
|
32739 <Iteration_query-len>1496</Iteration_query-len>
|
jpayne@1
|
32740 <Iteration_hits>
|
jpayne@1
|
32741 <Hit>
|
jpayne@1
|
32742 <Hit_num>1</Hit_num>
|
jpayne@1
|
32743 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32744 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32745 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32746 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32747 <Hit_hsps>
|
jpayne@1
|
32748 <Hsp>
|
jpayne@1
|
32749 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32750 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
32751 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
32752 <Hsp_evalue>6.55645e-135</Hsp_evalue>
|
jpayne@1
|
32753 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32754 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32755 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32756 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32757 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32758 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32759 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
32760 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
32761 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
32762 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
32763 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32764 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32765 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32766 </Hsp>
|
jpayne@1
|
32767 </Hit_hsps>
|
jpayne@1
|
32768 </Hit>
|
jpayne@1
|
32769 </Iteration_hits>
|
jpayne@1
|
32770 <Iteration_stat>
|
jpayne@1
|
32771 <Statistics>
|
jpayne@1
|
32772 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32773 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32774 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32775 <Statistics_eff-space>80840688</Statistics_eff-space>
|
jpayne@1
|
32776 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32777 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32778 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32779 </Statistics>
|
jpayne@1
|
32780 </Iteration_stat>
|
jpayne@1
|
32781 </Iteration>
|
jpayne@1
|
32782 <Iteration>
|
jpayne@1
|
32783 <Iteration_iter-num>636</Iteration_iter-num>
|
jpayne@1
|
32784 <Iteration_query-ID>Query_636</Iteration_query-ID>
|
jpayne@1
|
32785 <Iteration_query-def>fljB_e,n,x_Hadarstr_ABFG01000005_e__1496</Iteration_query-def>
|
jpayne@1
|
32786 <Iteration_query-len>1496</Iteration_query-len>
|
jpayne@1
|
32787 <Iteration_hits>
|
jpayne@1
|
32788 <Hit>
|
jpayne@1
|
32789 <Hit_num>1</Hit_num>
|
jpayne@1
|
32790 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32791 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32792 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32793 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32794 <Hit_hsps>
|
jpayne@1
|
32795 <Hsp>
|
jpayne@1
|
32796 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32797 <Hsp_bit-score>472.016</Hsp_bit-score>
|
jpayne@1
|
32798 <Hsp_score>255</Hsp_score>
|
jpayne@1
|
32799 <Hsp_evalue>6.55645e-135</Hsp_evalue>
|
jpayne@1
|
32800 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32801 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32802 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32803 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32804 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32805 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32806 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
32807 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
32808 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
32809 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
32810 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32811 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32812 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32813 </Hsp>
|
jpayne@1
|
32814 </Hit_hsps>
|
jpayne@1
|
32815 </Hit>
|
jpayne@1
|
32816 </Iteration_hits>
|
jpayne@1
|
32817 <Iteration_stat>
|
jpayne@1
|
32818 <Statistics>
|
jpayne@1
|
32819 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32820 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32821 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32822 <Statistics_eff-space>80840688</Statistics_eff-space>
|
jpayne@1
|
32823 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32824 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32825 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32826 </Statistics>
|
jpayne@1
|
32827 </Iteration_stat>
|
jpayne@1
|
32828 </Iteration>
|
jpayne@1
|
32829 <Iteration>
|
jpayne@1
|
32830 <Iteration_iter-num>637</Iteration_iter-num>
|
jpayne@1
|
32831 <Iteration_query-ID>Query_637</Iteration_query-ID>
|
jpayne@1
|
32832 <Iteration_query-def>fljB_1,2_Heidelbergstr_AMMX01000009_1__1511</Iteration_query-def>
|
jpayne@1
|
32833 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
32834 <Iteration_hits>
|
jpayne@1
|
32835 <Hit>
|
jpayne@1
|
32836 <Hit_num>1</Hit_num>
|
jpayne@1
|
32837 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32838 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32839 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32840 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32841 <Hit_hsps>
|
jpayne@1
|
32842 <Hsp>
|
jpayne@1
|
32843 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32844 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
32845 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
32846 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
32847 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32848 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32849 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32850 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32851 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32852 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32853 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
32854 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
32855 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32856 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32857 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32858 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32859 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32860 </Hsp>
|
jpayne@1
|
32861 </Hit_hsps>
|
jpayne@1
|
32862 </Hit>
|
jpayne@1
|
32863 </Iteration_hits>
|
jpayne@1
|
32864 <Iteration_stat>
|
jpayne@1
|
32865 <Statistics>
|
jpayne@1
|
32866 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32867 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32868 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32869 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
32870 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32871 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32872 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32873 </Statistics>
|
jpayne@1
|
32874 </Iteration_stat>
|
jpayne@1
|
32875 </Iteration>
|
jpayne@1
|
32876 <Iteration>
|
jpayne@1
|
32877 <Iteration_iter-num>638</Iteration_iter-num>
|
jpayne@1
|
32878 <Iteration_query-ID>Query_638</Iteration_query-ID>
|
jpayne@1
|
32879 <Iteration_query-def>fljB_1,2_Heidelbergstr_AMBU01000011_1__1511</Iteration_query-def>
|
jpayne@1
|
32880 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
32881 <Iteration_hits>
|
jpayne@1
|
32882 <Hit>
|
jpayne@1
|
32883 <Hit_num>1</Hit_num>
|
jpayne@1
|
32884 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32885 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32886 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32887 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32888 <Hit_hsps>
|
jpayne@1
|
32889 <Hsp>
|
jpayne@1
|
32890 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32891 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
32892 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
32893 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
32894 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32895 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32896 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32897 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32898 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32899 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32900 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
32901 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
32902 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32903 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32904 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32905 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32906 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32907 </Hsp>
|
jpayne@1
|
32908 </Hit_hsps>
|
jpayne@1
|
32909 </Hit>
|
jpayne@1
|
32910 </Iteration_hits>
|
jpayne@1
|
32911 <Iteration_stat>
|
jpayne@1
|
32912 <Statistics>
|
jpayne@1
|
32913 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32914 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32915 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32916 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
32917 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32918 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32919 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32920 </Statistics>
|
jpayne@1
|
32921 </Iteration_stat>
|
jpayne@1
|
32922 </Iteration>
|
jpayne@1
|
32923 <Iteration>
|
jpayne@1
|
32924 <Iteration_iter-num>639</Iteration_iter-num>
|
jpayne@1
|
32925 <Iteration_query-ID>Query_639</Iteration_query-ID>
|
jpayne@1
|
32926 <Iteration_query-def>fljB_1,2_Heidelbergstr_AMBV01000028_1__1511</Iteration_query-def>
|
jpayne@1
|
32927 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
32928 <Iteration_hits>
|
jpayne@1
|
32929 <Hit>
|
jpayne@1
|
32930 <Hit_num>1</Hit_num>
|
jpayne@1
|
32931 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32932 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32933 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32934 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32935 <Hit_hsps>
|
jpayne@1
|
32936 <Hsp>
|
jpayne@1
|
32937 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32938 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
32939 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
32940 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
32941 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32942 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32943 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32944 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32945 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32946 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32947 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
32948 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
32949 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32950 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32951 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32952 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
32953 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
32954 </Hsp>
|
jpayne@1
|
32955 </Hit_hsps>
|
jpayne@1
|
32956 </Hit>
|
jpayne@1
|
32957 </Iteration_hits>
|
jpayne@1
|
32958 <Iteration_stat>
|
jpayne@1
|
32959 <Statistics>
|
jpayne@1
|
32960 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
32961 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
32962 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
32963 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
32964 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
32965 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
32966 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
32967 </Statistics>
|
jpayne@1
|
32968 </Iteration_stat>
|
jpayne@1
|
32969 </Iteration>
|
jpayne@1
|
32970 <Iteration>
|
jpayne@1
|
32971 <Iteration_iter-num>640</Iteration_iter-num>
|
jpayne@1
|
32972 <Iteration_query-ID>Query_640</Iteration_query-ID>
|
jpayne@1
|
32973 <Iteration_query-def>fljB_1,2_Heidelbergstr_AMBW01000031_1__1511</Iteration_query-def>
|
jpayne@1
|
32974 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
32975 <Iteration_hits>
|
jpayne@1
|
32976 <Hit>
|
jpayne@1
|
32977 <Hit_num>1</Hit_num>
|
jpayne@1
|
32978 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
32979 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
32980 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
32981 <Hit_len>1962</Hit_len>
|
jpayne@1
|
32982 <Hit_hsps>
|
jpayne@1
|
32983 <Hsp>
|
jpayne@1
|
32984 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
32985 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
32986 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
32987 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
32988 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
32989 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
32990 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
32991 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
32992 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
32993 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
32994 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
32995 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
32996 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
32997 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
32998 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
32999 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33000 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33001 </Hsp>
|
jpayne@1
|
33002 </Hit_hsps>
|
jpayne@1
|
33003 </Hit>
|
jpayne@1
|
33004 </Iteration_hits>
|
jpayne@1
|
33005 <Iteration_stat>
|
jpayne@1
|
33006 <Statistics>
|
jpayne@1
|
33007 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33008 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33009 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33010 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33011 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33012 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33013 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33014 </Statistics>
|
jpayne@1
|
33015 </Iteration_stat>
|
jpayne@1
|
33016 </Iteration>
|
jpayne@1
|
33017 <Iteration>
|
jpayne@1
|
33018 <Iteration_iter-num>641</Iteration_iter-num>
|
jpayne@1
|
33019 <Iteration_query-ID>Query_641</Iteration_query-ID>
|
jpayne@1
|
33020 <Iteration_query-def>fljB_1,2_Heidelbergstr_AMBX01000038_1__1511</Iteration_query-def>
|
jpayne@1
|
33021 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
33022 <Iteration_hits>
|
jpayne@1
|
33023 <Hit>
|
jpayne@1
|
33024 <Hit_num>1</Hit_num>
|
jpayne@1
|
33025 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33026 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33027 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33028 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33029 <Hit_hsps>
|
jpayne@1
|
33030 <Hsp>
|
jpayne@1
|
33031 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33032 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33033 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33034 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
33035 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33036 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33037 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33038 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33039 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33040 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33041 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33042 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33043 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33044 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33045 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33046 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33047 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33048 </Hsp>
|
jpayne@1
|
33049 </Hit_hsps>
|
jpayne@1
|
33050 </Hit>
|
jpayne@1
|
33051 </Iteration_hits>
|
jpayne@1
|
33052 <Iteration_stat>
|
jpayne@1
|
33053 <Statistics>
|
jpayne@1
|
33054 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33055 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33056 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33057 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33058 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33059 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33060 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33061 </Statistics>
|
jpayne@1
|
33062 </Iteration_stat>
|
jpayne@1
|
33063 </Iteration>
|
jpayne@1
|
33064 <Iteration>
|
jpayne@1
|
33065 <Iteration_iter-num>642</Iteration_iter-num>
|
jpayne@1
|
33066 <Iteration_query-ID>Query_642</Iteration_query-ID>
|
jpayne@1
|
33067 <Iteration_query-def>fljB_1,2_Heidelbergstr_AMLT01000029_1__1511</Iteration_query-def>
|
jpayne@1
|
33068 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
33069 <Iteration_hits>
|
jpayne@1
|
33070 <Hit>
|
jpayne@1
|
33071 <Hit_num>1</Hit_num>
|
jpayne@1
|
33072 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33073 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33074 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33075 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33076 <Hit_hsps>
|
jpayne@1
|
33077 <Hsp>
|
jpayne@1
|
33078 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33079 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33080 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33081 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
33082 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33083 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33084 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33085 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33086 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33087 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33088 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33089 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33090 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33091 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33092 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33093 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33094 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33095 </Hsp>
|
jpayne@1
|
33096 </Hit_hsps>
|
jpayne@1
|
33097 </Hit>
|
jpayne@1
|
33098 </Iteration_hits>
|
jpayne@1
|
33099 <Iteration_stat>
|
jpayne@1
|
33100 <Statistics>
|
jpayne@1
|
33101 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33102 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33103 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33104 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33105 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33106 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33107 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33108 </Statistics>
|
jpayne@1
|
33109 </Iteration_stat>
|
jpayne@1
|
33110 </Iteration>
|
jpayne@1
|
33111 <Iteration>
|
jpayne@1
|
33112 <Iteration_iter-num>643</Iteration_iter-num>
|
jpayne@1
|
33113 <Iteration_query-ID>Query_643</Iteration_query-ID>
|
jpayne@1
|
33114 <Iteration_query-def>fljB_1,2_Heidelbergstr_ABEL01000015_1__1511</Iteration_query-def>
|
jpayne@1
|
33115 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
33116 <Iteration_hits>
|
jpayne@1
|
33117 <Hit>
|
jpayne@1
|
33118 <Hit_num>1</Hit_num>
|
jpayne@1
|
33119 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33120 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33121 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33122 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33123 <Hit_hsps>
|
jpayne@1
|
33124 <Hsp>
|
jpayne@1
|
33125 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33126 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33127 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33128 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
33129 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33130 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33131 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33132 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33133 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33134 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33135 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33136 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33137 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33138 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33139 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGTACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33140 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33141 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| || ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33142 </Hsp>
|
jpayne@1
|
33143 </Hit_hsps>
|
jpayne@1
|
33144 </Hit>
|
jpayne@1
|
33145 </Iteration_hits>
|
jpayne@1
|
33146 <Iteration_stat>
|
jpayne@1
|
33147 <Statistics>
|
jpayne@1
|
33148 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33149 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33150 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33151 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33152 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33153 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33154 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33155 </Statistics>
|
jpayne@1
|
33156 </Iteration_stat>
|
jpayne@1
|
33157 </Iteration>
|
jpayne@1
|
33158 <Iteration>
|
jpayne@1
|
33159 <Iteration_iter-num>644</Iteration_iter-num>
|
jpayne@1
|
33160 <Iteration_query-ID>Query_644</Iteration_query-ID>
|
jpayne@1
|
33161 <Iteration_query-def>fljB_1,7_Indianastr_AOZC01000015_1__1511</Iteration_query-def>
|
jpayne@1
|
33162 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
33163 <Iteration_hits>
|
jpayne@1
|
33164 <Hit>
|
jpayne@1
|
33165 <Hit_num>1</Hit_num>
|
jpayne@1
|
33166 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33167 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33168 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33169 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33170 <Hit_hsps>
|
jpayne@1
|
33171 <Hsp>
|
jpayne@1
|
33172 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33173 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
33174 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
33175 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
33176 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33177 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33178 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33179 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33180 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33181 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33182 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
33183 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
33184 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33185 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33186 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCACAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTGCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33187 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33188 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33189 </Hsp>
|
jpayne@1
|
33190 <Hsp>
|
jpayne@1
|
33191 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
33192 <Hsp_bit-score>180.245</Hsp_bit-score>
|
jpayne@1
|
33193 <Hsp_score>97</Hsp_score>
|
jpayne@1
|
33194 <Hsp_evalue>4.49542e-47</Hsp_evalue>
|
jpayne@1
|
33195 <Hsp_query-from>1308</Hsp_query-from>
|
jpayne@1
|
33196 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
33197 <Hsp_hit-from>439</Hsp_hit-from>
|
jpayne@1
|
33198 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
33199 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33200 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33201 <Hsp_identity>168</Hsp_identity>
|
jpayne@1
|
33202 <Hsp_positive>168</Hsp_positive>
|
jpayne@1
|
33203 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33204 <Hsp_align-len>203</Hsp_align-len>
|
jpayne@1
|
33205 <Hsp_qseq>TCTGGGTGCGGTACAAAACCGTTTCAACTCTGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACCGAAGTTTCCAACATGTCTCGTGCGCAGATCCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTCCCGCAGAACGTGCTGTCT</Hsp_qseq>
|
jpayne@1
|
33206 <Hsp_hseq>TCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
33207 <Hsp_midline>|||||| || | ||||||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || |||||||| || |||||| |||||||| ||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || |||</Hsp_midline>
|
jpayne@1
|
33208 </Hsp>
|
jpayne@1
|
33209 </Hit_hsps>
|
jpayne@1
|
33210 </Hit>
|
jpayne@1
|
33211 </Iteration_hits>
|
jpayne@1
|
33212 <Iteration_stat>
|
jpayne@1
|
33213 <Statistics>
|
jpayne@1
|
33214 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33215 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33216 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33217 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33218 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33219 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33220 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33221 </Statistics>
|
jpayne@1
|
33222 </Iteration_stat>
|
jpayne@1
|
33223 </Iteration>
|
jpayne@1
|
33224 <Iteration>
|
jpayne@1
|
33225 <Iteration_iter-num>645</Iteration_iter-num>
|
jpayne@1
|
33226 <Iteration_query-ID>Query_645</Iteration_query-ID>
|
jpayne@1
|
33227 <Iteration_query-def>fljB_1,5_Infantisstr_ASRF01000034_1__1511</Iteration_query-def>
|
jpayne@1
|
33228 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
33229 <Iteration_hits>
|
jpayne@1
|
33230 <Hit>
|
jpayne@1
|
33231 <Hit_num>1</Hit_num>
|
jpayne@1
|
33232 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33233 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33234 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33235 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33236 <Hit_hsps>
|
jpayne@1
|
33237 <Hsp>
|
jpayne@1
|
33238 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33239 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33240 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33241 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
33242 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33243 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33244 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33245 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33246 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33247 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33248 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33249 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33250 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33251 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33252 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33253 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33254 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33255 </Hsp>
|
jpayne@1
|
33256 </Hit_hsps>
|
jpayne@1
|
33257 </Hit>
|
jpayne@1
|
33258 </Iteration_hits>
|
jpayne@1
|
33259 <Iteration_stat>
|
jpayne@1
|
33260 <Statistics>
|
jpayne@1
|
33261 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33262 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33263 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33264 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33265 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33266 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33267 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33268 </Statistics>
|
jpayne@1
|
33269 </Iteration_stat>
|
jpayne@1
|
33270 </Iteration>
|
jpayne@1
|
33271 <Iteration>
|
jpayne@1
|
33272 <Iteration_iter-num>646</Iteration_iter-num>
|
jpayne@1
|
33273 <Iteration_query-ID>Query_646</Iteration_query-ID>
|
jpayne@1
|
33274 <Iteration_query-def>fljB_1,5_Infantisstr_ATHK01000001_1__1511</Iteration_query-def>
|
jpayne@1
|
33275 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
33276 <Iteration_hits>
|
jpayne@1
|
33277 <Hit>
|
jpayne@1
|
33278 <Hit_num>1</Hit_num>
|
jpayne@1
|
33279 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33280 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33281 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33282 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33283 <Hit_hsps>
|
jpayne@1
|
33284 <Hsp>
|
jpayne@1
|
33285 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33286 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33287 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33288 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
33289 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33290 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33291 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33292 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33293 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33294 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33295 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33296 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33297 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33298 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33299 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33300 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33301 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33302 </Hsp>
|
jpayne@1
|
33303 </Hit_hsps>
|
jpayne@1
|
33304 </Hit>
|
jpayne@1
|
33305 </Iteration_hits>
|
jpayne@1
|
33306 <Iteration_stat>
|
jpayne@1
|
33307 <Statistics>
|
jpayne@1
|
33308 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33309 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33310 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33311 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33312 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33313 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33314 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33315 </Statistics>
|
jpayne@1
|
33316 </Iteration_stat>
|
jpayne@1
|
33317 </Iteration>
|
jpayne@1
|
33318 <Iteration>
|
jpayne@1
|
33319 <Iteration_iter-num>647</Iteration_iter-num>
|
jpayne@1
|
33320 <Iteration_query-ID>Query_647</Iteration_query-ID>
|
jpayne@1
|
33321 <Iteration_query-def>fljB_1,5_Infantisstr_AFYI01000002_1__1511</Iteration_query-def>
|
jpayne@1
|
33322 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
33323 <Iteration_hits>
|
jpayne@1
|
33324 <Hit>
|
jpayne@1
|
33325 <Hit_num>1</Hit_num>
|
jpayne@1
|
33326 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33327 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33328 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33329 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33330 <Hit_hsps>
|
jpayne@1
|
33331 <Hsp>
|
jpayne@1
|
33332 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33333 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
33334 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
33335 <Hsp_evalue>1.43363e-131</Hsp_evalue>
|
jpayne@1
|
33336 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33337 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33338 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33339 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33340 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33341 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33342 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
33343 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
33344 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33345 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33346 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAATGACGGTATTTCTATTGCGCAAACTACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCACAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33347 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33348 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||| ||||| |||||||||||||| || |||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33349 </Hsp>
|
jpayne@1
|
33350 </Hit_hsps>
|
jpayne@1
|
33351 </Hit>
|
jpayne@1
|
33352 </Iteration_hits>
|
jpayne@1
|
33353 <Iteration_stat>
|
jpayne@1
|
33354 <Statistics>
|
jpayne@1
|
33355 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33356 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33357 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33358 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33359 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33360 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33361 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33362 </Statistics>
|
jpayne@1
|
33363 </Iteration_stat>
|
jpayne@1
|
33364 </Iteration>
|
jpayne@1
|
33365 <Iteration>
|
jpayne@1
|
33366 <Iteration_iter-num>648</Iteration_iter-num>
|
jpayne@1
|
33367 <Iteration_query-ID>Query_648</Iteration_query-ID>
|
jpayne@1
|
33368 <Iteration_query-def>fljB_1,6_Invernessstr_AOZD01000029_1__1511</Iteration_query-def>
|
jpayne@1
|
33369 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
33370 <Iteration_hits>
|
jpayne@1
|
33371 <Hit>
|
jpayne@1
|
33372 <Hit_num>1</Hit_num>
|
jpayne@1
|
33373 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33374 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33375 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33376 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33377 <Hit_hsps>
|
jpayne@1
|
33378 <Hsp>
|
jpayne@1
|
33379 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33380 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
33381 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
33382 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
33383 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33384 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33385 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33386 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33387 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33388 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33389 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
33390 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
33391 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
33392 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
33393 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33394 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33395 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33396 </Hsp>
|
jpayne@1
|
33397 <Hsp>
|
jpayne@1
|
33398 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
33399 <Hsp_bit-score>172.859</Hsp_bit-score>
|
jpayne@1
|
33400 <Hsp_score>93</Hsp_score>
|
jpayne@1
|
33401 <Hsp_evalue>7.52243e-45</Hsp_evalue>
|
jpayne@1
|
33402 <Hsp_query-from>1324</Hsp_query-from>
|
jpayne@1
|
33403 <Hsp_query-to>1509</Hsp_query-to>
|
jpayne@1
|
33404 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
33405 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
33406 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33407 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33408 <Hsp_identity>156</Hsp_identity>
|
jpayne@1
|
33409 <Hsp_positive>156</Hsp_positive>
|
jpayne@1
|
33410 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33411 <Hsp_align-len>187</Hsp_align-len>
|
jpayne@1
|
33412 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTCCCGCAGAACGTGCTGTCT</Hsp_qseq>
|
jpayne@1
|
33413 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
33414 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || |||</Hsp_midline>
|
jpayne@1
|
33415 </Hsp>
|
jpayne@1
|
33416 </Hit_hsps>
|
jpayne@1
|
33417 </Hit>
|
jpayne@1
|
33418 </Iteration_hits>
|
jpayne@1
|
33419 <Iteration_stat>
|
jpayne@1
|
33420 <Statistics>
|
jpayne@1
|
33421 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33422 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33423 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33424 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33425 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33426 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33427 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33428 </Statistics>
|
jpayne@1
|
33429 </Iteration_stat>
|
jpayne@1
|
33430 </Iteration>
|
jpayne@1
|
33431 <Iteration>
|
jpayne@1
|
33432 <Iteration_iter-num>649</Iteration_iter-num>
|
jpayne@1
|
33433 <Iteration_query-ID>Query_649</Iteration_query-ID>
|
jpayne@1
|
33434 <Iteration_query-def>fljB_z6_Kentuckystr_AYDR01000034_k,z__1493</Iteration_query-def>
|
jpayne@1
|
33435 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
33436 <Iteration_hits>
|
jpayne@1
|
33437 <Hit>
|
jpayne@1
|
33438 <Hit_num>1</Hit_num>
|
jpayne@1
|
33439 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33440 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33441 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33442 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33443 <Hit_hsps>
|
jpayne@1
|
33444 <Hsp>
|
jpayne@1
|
33445 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33446 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33447 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33448 <Hsp_evalue>6.5896e-130</Hsp_evalue>
|
jpayne@1
|
33449 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33450 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33451 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33452 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33453 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33454 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33455 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33456 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33457 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33458 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33459 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33460 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33461 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33462 </Hsp>
|
jpayne@1
|
33463 </Hit_hsps>
|
jpayne@1
|
33464 </Hit>
|
jpayne@1
|
33465 </Iteration_hits>
|
jpayne@1
|
33466 <Iteration_stat>
|
jpayne@1
|
33467 <Statistics>
|
jpayne@1
|
33468 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33469 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33470 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33471 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
33472 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33473 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33474 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33475 </Statistics>
|
jpayne@1
|
33476 </Iteration_stat>
|
jpayne@1
|
33477 </Iteration>
|
jpayne@1
|
33478 <Iteration>
|
jpayne@1
|
33479 <Iteration_iter-num>650</Iteration_iter-num>
|
jpayne@1
|
33480 <Iteration_query-ID>Query_650</Iteration_query-ID>
|
jpayne@1
|
33481 <Iteration_query-def>fljB_z6_Kentuckystr_AUQF01000002_k,z__1493</Iteration_query-def>
|
jpayne@1
|
33482 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
33483 <Iteration_hits>
|
jpayne@1
|
33484 <Hit>
|
jpayne@1
|
33485 <Hit_num>1</Hit_num>
|
jpayne@1
|
33486 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33487 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33488 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33489 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33490 <Hit_hsps>
|
jpayne@1
|
33491 <Hsp>
|
jpayne@1
|
33492 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33493 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33494 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33495 <Hsp_evalue>6.5896e-130</Hsp_evalue>
|
jpayne@1
|
33496 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33497 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33498 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33499 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33500 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33501 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33502 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33503 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33504 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33505 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33506 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33507 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33508 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33509 </Hsp>
|
jpayne@1
|
33510 </Hit_hsps>
|
jpayne@1
|
33511 </Hit>
|
jpayne@1
|
33512 </Iteration_hits>
|
jpayne@1
|
33513 <Iteration_stat>
|
jpayne@1
|
33514 <Statistics>
|
jpayne@1
|
33515 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33516 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33517 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33518 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
33519 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33520 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33521 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33522 </Statistics>
|
jpayne@1
|
33523 </Iteration_stat>
|
jpayne@1
|
33524 </Iteration>
|
jpayne@1
|
33525 <Iteration>
|
jpayne@1
|
33526 <Iteration_iter-num>651</Iteration_iter-num>
|
jpayne@1
|
33527 <Iteration_query-ID>Query_651</Iteration_query-ID>
|
jpayne@1
|
33528 <Iteration_query-def>fljB_z6_Kentuckystr_AUQJ01000001_k,z__1493</Iteration_query-def>
|
jpayne@1
|
33529 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
33530 <Iteration_hits>
|
jpayne@1
|
33531 <Hit>
|
jpayne@1
|
33532 <Hit_num>1</Hit_num>
|
jpayne@1
|
33533 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33534 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33535 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33536 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33537 <Hit_hsps>
|
jpayne@1
|
33538 <Hsp>
|
jpayne@1
|
33539 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33540 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33541 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33542 <Hsp_evalue>6.5896e-130</Hsp_evalue>
|
jpayne@1
|
33543 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33544 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33545 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33546 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33547 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33548 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33549 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33550 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33551 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33552 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33553 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33554 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33555 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33556 </Hsp>
|
jpayne@1
|
33557 </Hit_hsps>
|
jpayne@1
|
33558 </Hit>
|
jpayne@1
|
33559 </Iteration_hits>
|
jpayne@1
|
33560 <Iteration_stat>
|
jpayne@1
|
33561 <Statistics>
|
jpayne@1
|
33562 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33563 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33564 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33565 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
33566 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33567 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33568 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33569 </Statistics>
|
jpayne@1
|
33570 </Iteration_stat>
|
jpayne@1
|
33571 </Iteration>
|
jpayne@1
|
33572 <Iteration>
|
jpayne@1
|
33573 <Iteration_iter-num>652</Iteration_iter-num>
|
jpayne@1
|
33574 <Iteration_query-ID>Query_652</Iteration_query-ID>
|
jpayne@1
|
33575 <Iteration_query-def>fljB_z6_Kentuckystr_AUQH01000001_k,z__1493</Iteration_query-def>
|
jpayne@1
|
33576 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
33577 <Iteration_hits>
|
jpayne@1
|
33578 <Hit>
|
jpayne@1
|
33579 <Hit_num>1</Hit_num>
|
jpayne@1
|
33580 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33581 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33582 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33583 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33584 <Hit_hsps>
|
jpayne@1
|
33585 <Hsp>
|
jpayne@1
|
33586 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33587 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33588 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33589 <Hsp_evalue>6.5896e-130</Hsp_evalue>
|
jpayne@1
|
33590 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33591 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33592 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33593 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33594 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33595 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33596 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33597 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33598 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33599 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33600 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33601 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33602 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33603 </Hsp>
|
jpayne@1
|
33604 </Hit_hsps>
|
jpayne@1
|
33605 </Hit>
|
jpayne@1
|
33606 </Iteration_hits>
|
jpayne@1
|
33607 <Iteration_stat>
|
jpayne@1
|
33608 <Statistics>
|
jpayne@1
|
33609 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33610 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33611 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33612 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
33613 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33614 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33615 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33616 </Statistics>
|
jpayne@1
|
33617 </Iteration_stat>
|
jpayne@1
|
33618 </Iteration>
|
jpayne@1
|
33619 <Iteration>
|
jpayne@1
|
33620 <Iteration_iter-num>653</Iteration_iter-num>
|
jpayne@1
|
33621 <Iteration_query-ID>Query_653</Iteration_query-ID>
|
jpayne@1
|
33622 <Iteration_query-def>fljB_z6_Kentuckystr_AHUU01000123_k,z__1493</Iteration_query-def>
|
jpayne@1
|
33623 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
33624 <Iteration_hits>
|
jpayne@1
|
33625 <Hit>
|
jpayne@1
|
33626 <Hit_num>1</Hit_num>
|
jpayne@1
|
33627 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33628 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33629 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33630 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33631 <Hit_hsps>
|
jpayne@1
|
33632 <Hsp>
|
jpayne@1
|
33633 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33634 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33635 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33636 <Hsp_evalue>6.5896e-130</Hsp_evalue>
|
jpayne@1
|
33637 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33638 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33639 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33640 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33641 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33642 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33643 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33644 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33645 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33646 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33647 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33648 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33649 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33650 </Hsp>
|
jpayne@1
|
33651 </Hit_hsps>
|
jpayne@1
|
33652 </Hit>
|
jpayne@1
|
33653 </Iteration_hits>
|
jpayne@1
|
33654 <Iteration_stat>
|
jpayne@1
|
33655 <Statistics>
|
jpayne@1
|
33656 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33657 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33658 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33659 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
33660 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33661 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33662 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33663 </Statistics>
|
jpayne@1
|
33664 </Iteration_stat>
|
jpayne@1
|
33665 </Iteration>
|
jpayne@1
|
33666 <Iteration>
|
jpayne@1
|
33667 <Iteration_iter-num>654</Iteration_iter-num>
|
jpayne@1
|
33668 <Iteration_query-ID>Query_654</Iteration_query-ID>
|
jpayne@1
|
33669 <Iteration_query-def>fljB_z6_Kentuckystr_AOYZ01000091_k,z__1493</Iteration_query-def>
|
jpayne@1
|
33670 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
33671 <Iteration_hits>
|
jpayne@1
|
33672 <Hit>
|
jpayne@1
|
33673 <Hit_num>1</Hit_num>
|
jpayne@1
|
33674 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33675 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33676 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33677 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33678 <Hit_hsps>
|
jpayne@1
|
33679 <Hsp>
|
jpayne@1
|
33680 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33681 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33682 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33683 <Hsp_evalue>6.5896e-130</Hsp_evalue>
|
jpayne@1
|
33684 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33685 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33686 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33687 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33688 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33689 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33690 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33691 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33692 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33693 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33694 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33695 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33696 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33697 </Hsp>
|
jpayne@1
|
33698 </Hit_hsps>
|
jpayne@1
|
33699 </Hit>
|
jpayne@1
|
33700 </Iteration_hits>
|
jpayne@1
|
33701 <Iteration_stat>
|
jpayne@1
|
33702 <Statistics>
|
jpayne@1
|
33703 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33704 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33705 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33706 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
33707 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33708 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33709 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33710 </Statistics>
|
jpayne@1
|
33711 </Iteration_stat>
|
jpayne@1
|
33712 </Iteration>
|
jpayne@1
|
33713 <Iteration>
|
jpayne@1
|
33714 <Iteration_iter-num>655</Iteration_iter-num>
|
jpayne@1
|
33715 <Iteration_query-ID>Query_655</Iteration_query-ID>
|
jpayne@1
|
33716 <Iteration_query-def>fljB_z6_Kentuckystr_AOYY01000105_k,z__1493</Iteration_query-def>
|
jpayne@1
|
33717 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
33718 <Iteration_hits>
|
jpayne@1
|
33719 <Hit>
|
jpayne@1
|
33720 <Hit_num>1</Hit_num>
|
jpayne@1
|
33721 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33722 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33723 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33724 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33725 <Hit_hsps>
|
jpayne@1
|
33726 <Hsp>
|
jpayne@1
|
33727 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33728 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
33729 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
33730 <Hsp_evalue>1.41634e-131</Hsp_evalue>
|
jpayne@1
|
33731 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33732 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33733 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33734 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33735 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33736 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33737 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33738 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33739 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
33740 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
33741 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33742 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33743 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33744 </Hsp>
|
jpayne@1
|
33745 </Hit_hsps>
|
jpayne@1
|
33746 </Hit>
|
jpayne@1
|
33747 </Iteration_hits>
|
jpayne@1
|
33748 <Iteration_stat>
|
jpayne@1
|
33749 <Statistics>
|
jpayne@1
|
33750 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33751 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33752 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33753 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
33754 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33755 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33756 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33757 </Statistics>
|
jpayne@1
|
33758 </Iteration_stat>
|
jpayne@1
|
33759 </Iteration>
|
jpayne@1
|
33760 <Iteration>
|
jpayne@1
|
33761 <Iteration_iter-num>656</Iteration_iter-num>
|
jpayne@1
|
33762 <Iteration_query-ID>Query_656</Iteration_query-ID>
|
jpayne@1
|
33763 <Iteration_query-def>fljB_z6_Kentuckystr_ABAK02000001_k,z__1493</Iteration_query-def>
|
jpayne@1
|
33764 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
33765 <Iteration_hits>
|
jpayne@1
|
33766 <Hit>
|
jpayne@1
|
33767 <Hit_num>1</Hit_num>
|
jpayne@1
|
33768 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33769 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33770 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33771 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33772 <Hit_hsps>
|
jpayne@1
|
33773 <Hsp>
|
jpayne@1
|
33774 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33775 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33776 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33777 <Hsp_evalue>6.5896e-130</Hsp_evalue>
|
jpayne@1
|
33778 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33779 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33780 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33781 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33782 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33783 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33784 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33785 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33786 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33787 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33788 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33789 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33790 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33791 </Hsp>
|
jpayne@1
|
33792 </Hit_hsps>
|
jpayne@1
|
33793 </Hit>
|
jpayne@1
|
33794 </Iteration_hits>
|
jpayne@1
|
33795 <Iteration_stat>
|
jpayne@1
|
33796 <Statistics>
|
jpayne@1
|
33797 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33798 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33799 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33800 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
33801 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33802 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33803 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33804 </Statistics>
|
jpayne@1
|
33805 </Iteration_stat>
|
jpayne@1
|
33806 </Iteration>
|
jpayne@1
|
33807 <Iteration>
|
jpayne@1
|
33808 <Iteration_iter-num>657</Iteration_iter-num>
|
jpayne@1
|
33809 <Iteration_query-ID>Query_657</Iteration_query-ID>
|
jpayne@1
|
33810 <Iteration_query-def>fljB_z6_Kentuckystr_AUQI01000001_k,z__1493</Iteration_query-def>
|
jpayne@1
|
33811 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
33812 <Iteration_hits>
|
jpayne@1
|
33813 <Hit>
|
jpayne@1
|
33814 <Hit_num>1</Hit_num>
|
jpayne@1
|
33815 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33816 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33817 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33818 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33819 <Hit_hsps>
|
jpayne@1
|
33820 <Hsp>
|
jpayne@1
|
33821 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33822 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
33823 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
33824 <Hsp_evalue>6.5896e-130</Hsp_evalue>
|
jpayne@1
|
33825 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33826 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33827 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33828 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33829 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33830 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33831 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
33832 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
33833 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33834 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33835 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33836 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33837 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33838 </Hsp>
|
jpayne@1
|
33839 </Hit_hsps>
|
jpayne@1
|
33840 </Hit>
|
jpayne@1
|
33841 </Iteration_hits>
|
jpayne@1
|
33842 <Iteration_stat>
|
jpayne@1
|
33843 <Statistics>
|
jpayne@1
|
33844 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33845 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33846 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33847 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
33848 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33849 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33850 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33851 </Statistics>
|
jpayne@1
|
33852 </Iteration_stat>
|
jpayne@1
|
33853 </Iteration>
|
jpayne@1
|
33854 <Iteration>
|
jpayne@1
|
33855 <Iteration_iter-num>658</Iteration_iter-num>
|
jpayne@1
|
33856 <Iteration_query-ID>Query_658</Iteration_query-ID>
|
jpayne@1
|
33857 <Iteration_query-def>fljB_1,2_Litchfieldstr_APAN01000023_1__1511</Iteration_query-def>
|
jpayne@1
|
33858 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
33859 <Iteration_hits>
|
jpayne@1
|
33860 <Hit>
|
jpayne@1
|
33861 <Hit_num>1</Hit_num>
|
jpayne@1
|
33862 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33863 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33864 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33865 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33866 <Hit_hsps>
|
jpayne@1
|
33867 <Hsp>
|
jpayne@1
|
33868 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33869 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
33870 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
33871 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
33872 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33873 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33874 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33875 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33876 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33877 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33878 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
33879 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
33880 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
33881 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
33882 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33883 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33884 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33885 </Hsp>
|
jpayne@1
|
33886 </Hit_hsps>
|
jpayne@1
|
33887 </Hit>
|
jpayne@1
|
33888 </Iteration_hits>
|
jpayne@1
|
33889 <Iteration_stat>
|
jpayne@1
|
33890 <Statistics>
|
jpayne@1
|
33891 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33892 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33893 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33894 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33895 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33896 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33897 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33898 </Statistics>
|
jpayne@1
|
33899 </Iteration_stat>
|
jpayne@1
|
33900 </Iteration>
|
jpayne@1
|
33901 <Iteration>
|
jpayne@1
|
33902 <Iteration_iter-num>659</Iteration_iter-num>
|
jpayne@1
|
33903 <Iteration_query-ID>Query_659</Iteration_query-ID>
|
jpayne@1
|
33904 <Iteration_query-def>fljB_1,5_Manhattanstr_CBKW010000016_1__1511</Iteration_query-def>
|
jpayne@1
|
33905 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
33906 <Iteration_hits>
|
jpayne@1
|
33907 <Hit>
|
jpayne@1
|
33908 <Hit_num>1</Hit_num>
|
jpayne@1
|
33909 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33910 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33911 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33912 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33913 <Hit_hsps>
|
jpayne@1
|
33914 <Hsp>
|
jpayne@1
|
33915 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33916 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
33917 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
33918 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
33919 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33920 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33921 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33922 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33923 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33924 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33925 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
33926 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
33927 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33928 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33929 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33930 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33931 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33932 </Hsp>
|
jpayne@1
|
33933 </Hit_hsps>
|
jpayne@1
|
33934 </Hit>
|
jpayne@1
|
33935 </Iteration_hits>
|
jpayne@1
|
33936 <Iteration_stat>
|
jpayne@1
|
33937 <Statistics>
|
jpayne@1
|
33938 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
33939 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
33940 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
33941 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
33942 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
33943 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
33944 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
33945 </Statistics>
|
jpayne@1
|
33946 </Iteration_stat>
|
jpayne@1
|
33947 </Iteration>
|
jpayne@1
|
33948 <Iteration>
|
jpayne@1
|
33949 <Iteration_iter-num>660</Iteration_iter-num>
|
jpayne@1
|
33950 <Iteration_query-ID>Query_660</Iteration_query-ID>
|
jpayne@1
|
33951 <Iteration_query-def>fljB_e,n,z15_Mbandakastr_AMRS01000032_e__1496</Iteration_query-def>
|
jpayne@1
|
33952 <Iteration_query-len>1496</Iteration_query-len>
|
jpayne@1
|
33953 <Iteration_hits>
|
jpayne@1
|
33954 <Hit>
|
jpayne@1
|
33955 <Hit_num>1</Hit_num>
|
jpayne@1
|
33956 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
33957 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
33958 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
33959 <Hit_len>1962</Hit_len>
|
jpayne@1
|
33960 <Hit_hsps>
|
jpayne@1
|
33961 <Hsp>
|
jpayne@1
|
33962 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
33963 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
33964 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
33965 <Hsp_evalue>3.07208e-128</Hsp_evalue>
|
jpayne@1
|
33966 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
33967 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
33968 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
33969 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
33970 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33971 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33972 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
33973 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
33974 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33975 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
33976 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
33977 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
33978 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
33979 </Hsp>
|
jpayne@1
|
33980 <Hsp>
|
jpayne@1
|
33981 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
33982 <Hsp_bit-score>172.859</Hsp_bit-score>
|
jpayne@1
|
33983 <Hsp_score>93</Hsp_score>
|
jpayne@1
|
33984 <Hsp_evalue>7.44685e-45</Hsp_evalue>
|
jpayne@1
|
33985 <Hsp_query-from>1309</Hsp_query-from>
|
jpayne@1
|
33986 <Hsp_query-to>1494</Hsp_query-to>
|
jpayne@1
|
33987 <Hsp_hit-from>423</Hsp_hit-from>
|
jpayne@1
|
33988 <Hsp_hit-to>238</Hsp_hit-to>
|
jpayne@1
|
33989 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
33990 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
33991 <Hsp_identity>156</Hsp_identity>
|
jpayne@1
|
33992 <Hsp_positive>156</Hsp_positive>
|
jpayne@1
|
33993 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
33994 <Hsp_align-len>187</Hsp_align-len>
|
jpayne@1
|
33995 <Hsp_qseq>AACCGTTTCAACTCCGCTATCACCAACCTGGGCAATACCGTAAACAACCTG-TCTGAAGCGCGTAGCCGTATCGAAGATTCCGACTATGCGACTGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCTAACCAGGTCCCGCAGAACGTGCTGTCT</Hsp_qseq>
|
jpayne@1
|
33996 <Hsp_hseq>AACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACT-CCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCT</Hsp_hseq>
|
jpayne@1
|
33997 <Hsp_midline>|||||||| | || || || |||||||| |||||||| |||| ||| ||| || || |||||||||||||||||| | |||||||| || ||||| || || |||||| |||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||| ||||| || |||</Hsp_midline>
|
jpayne@1
|
33998 </Hsp>
|
jpayne@1
|
33999 </Hit_hsps>
|
jpayne@1
|
34000 </Hit>
|
jpayne@1
|
34001 </Iteration_hits>
|
jpayne@1
|
34002 <Iteration_stat>
|
jpayne@1
|
34003 <Statistics>
|
jpayne@1
|
34004 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34005 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34006 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34007 <Statistics_eff-space>80840688</Statistics_eff-space>
|
jpayne@1
|
34008 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34009 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34010 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34011 </Statistics>
|
jpayne@1
|
34012 </Iteration_stat>
|
jpayne@1
|
34013 </Iteration>
|
jpayne@1
|
34014 <Iteration>
|
jpayne@1
|
34015 <Iteration_iter-num>661</Iteration_iter-num>
|
jpayne@1
|
34016 <Iteration_query-ID>Query_661</Iteration_query-ID>
|
jpayne@1
|
34017 <Iteration_query-def>fljB_e,n,x_Minnesotastr_AOYO01000082_e__1496</Iteration_query-def>
|
jpayne@1
|
34018 <Iteration_query-len>1496</Iteration_query-len>
|
jpayne@1
|
34019 <Iteration_hits>
|
jpayne@1
|
34020 <Hit>
|
jpayne@1
|
34021 <Hit_num>1</Hit_num>
|
jpayne@1
|
34022 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34023 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34024 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34025 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34026 <Hit_hsps>
|
jpayne@1
|
34027 <Hsp>
|
jpayne@1
|
34028 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34029 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
34030 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
34031 <Hsp_evalue>6.64988e-125</Hsp_evalue>
|
jpayne@1
|
34032 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34033 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34034 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34035 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34036 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34037 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34038 <Hsp_identity>400</Hsp_identity>
|
jpayne@1
|
34039 <Hsp_positive>400</Hsp_positive>
|
jpayne@1
|
34040 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
34041 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
34042 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCCTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34043 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34044 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || |||||||||||||||||||| |||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34045 </Hsp>
|
jpayne@1
|
34046 </Hit_hsps>
|
jpayne@1
|
34047 </Hit>
|
jpayne@1
|
34048 </Iteration_hits>
|
jpayne@1
|
34049 <Iteration_stat>
|
jpayne@1
|
34050 <Statistics>
|
jpayne@1
|
34051 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34052 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34053 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34054 <Statistics_eff-space>80840688</Statistics_eff-space>
|
jpayne@1
|
34055 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34056 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34057 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34058 </Statistics>
|
jpayne@1
|
34059 </Iteration_stat>
|
jpayne@1
|
34060 </Iteration>
|
jpayne@1
|
34061 <Iteration>
|
jpayne@1
|
34062 <Iteration_iter-num>662</Iteration_iter-num>
|
jpayne@1
|
34063 <Iteration_query-ID>Query_662</Iteration_query-ID>
|
jpayne@1
|
34064 <Iteration_query-def>fljB_1,2_Muenchenstr_ARYX01000100_1__1511</Iteration_query-def>
|
jpayne@1
|
34065 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34066 <Iteration_hits>
|
jpayne@1
|
34067 <Hit>
|
jpayne@1
|
34068 <Hit_num>1</Hit_num>
|
jpayne@1
|
34069 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34070 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34071 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34072 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34073 <Hit_hsps>
|
jpayne@1
|
34074 <Hsp>
|
jpayne@1
|
34075 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34076 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
34077 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
34078 <Hsp_evalue>1.43363e-131</Hsp_evalue>
|
jpayne@1
|
34079 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34080 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34081 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34082 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34083 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34084 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34085 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
34086 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
34087 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34088 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34089 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAATAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34090 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34091 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34092 </Hsp>
|
jpayne@1
|
34093 </Hit_hsps>
|
jpayne@1
|
34094 </Hit>
|
jpayne@1
|
34095 </Iteration_hits>
|
jpayne@1
|
34096 <Iteration_stat>
|
jpayne@1
|
34097 <Statistics>
|
jpayne@1
|
34098 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34099 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34100 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34101 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34102 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34103 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34104 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34105 </Statistics>
|
jpayne@1
|
34106 </Iteration_stat>
|
jpayne@1
|
34107 </Iteration>
|
jpayne@1
|
34108 <Iteration>
|
jpayne@1
|
34109 <Iteration_iter-num>663</Iteration_iter-num>
|
jpayne@1
|
34110 <Iteration_query-ID>Query_663</Iteration_query-ID>
|
jpayne@1
|
34111 <Iteration_query-def>fljB_1,2_Muenchenstr_ARYW01000037_1__1511</Iteration_query-def>
|
jpayne@1
|
34112 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34113 <Iteration_hits>
|
jpayne@1
|
34114 <Hit>
|
jpayne@1
|
34115 <Hit_num>1</Hit_num>
|
jpayne@1
|
34116 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34117 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34118 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34119 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34120 <Hit_hsps>
|
jpayne@1
|
34121 <Hsp>
|
jpayne@1
|
34122 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34123 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
34124 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
34125 <Hsp_evalue>1.43363e-131</Hsp_evalue>
|
jpayne@1
|
34126 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34127 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34128 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34129 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34130 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34131 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34132 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
34133 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
34134 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34135 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34136 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAATAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34137 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34138 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34139 </Hsp>
|
jpayne@1
|
34140 </Hit_hsps>
|
jpayne@1
|
34141 </Hit>
|
jpayne@1
|
34142 </Iteration_hits>
|
jpayne@1
|
34143 <Iteration_stat>
|
jpayne@1
|
34144 <Statistics>
|
jpayne@1
|
34145 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34146 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34147 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34148 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34149 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34150 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34151 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34152 </Statistics>
|
jpayne@1
|
34153 </Iteration_stat>
|
jpayne@1
|
34154 </Iteration>
|
jpayne@1
|
34155 <Iteration>
|
jpayne@1
|
34156 <Iteration_iter-num>664</Iteration_iter-num>
|
jpayne@1
|
34157 <Iteration_query-ID>Query_664</Iteration_query-ID>
|
jpayne@1
|
34158 <Iteration_query-def>fljB_1,2_Muenchenstr_AOXN01000021_1__1511</Iteration_query-def>
|
jpayne@1
|
34159 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34160 <Iteration_hits>
|
jpayne@1
|
34161 <Hit>
|
jpayne@1
|
34162 <Hit_num>1</Hit_num>
|
jpayne@1
|
34163 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34164 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34165 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34166 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34167 <Hit_hsps>
|
jpayne@1
|
34168 <Hsp>
|
jpayne@1
|
34169 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34170 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
34171 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
34172 <Hsp_evalue>1.43363e-131</Hsp_evalue>
|
jpayne@1
|
34173 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34174 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34175 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34176 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34177 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34178 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34179 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
34180 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
34181 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34182 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34183 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAATAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34184 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34185 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||| ||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34186 </Hsp>
|
jpayne@1
|
34187 </Hit_hsps>
|
jpayne@1
|
34188 </Hit>
|
jpayne@1
|
34189 </Iteration_hits>
|
jpayne@1
|
34190 <Iteration_stat>
|
jpayne@1
|
34191 <Statistics>
|
jpayne@1
|
34192 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34193 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34194 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34195 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34196 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34197 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34198 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34199 </Statistics>
|
jpayne@1
|
34200 </Iteration_stat>
|
jpayne@1
|
34201 </Iteration>
|
jpayne@1
|
34202 <Iteration>
|
jpayne@1
|
34203 <Iteration_iter-num>665</Iteration_iter-num>
|
jpayne@1
|
34204 <Iteration_query-ID>Query_665</Iteration_query-ID>
|
jpayne@1
|
34205 <Iteration_query-def>fljB_1,2_Muenchenstr_AOYT01000042_1__1511</Iteration_query-def>
|
jpayne@1
|
34206 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34207 <Iteration_hits>
|
jpayne@1
|
34208 <Hit>
|
jpayne@1
|
34209 <Hit_num>1</Hit_num>
|
jpayne@1
|
34210 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34211 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34212 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34213 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34214 <Hit_hsps>
|
jpayne@1
|
34215 <Hsp>
|
jpayne@1
|
34216 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34217 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34218 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34219 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34220 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34221 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34222 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34223 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34224 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34225 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34226 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34227 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34228 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34229 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34230 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34231 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34232 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34233 </Hsp>
|
jpayne@1
|
34234 </Hit_hsps>
|
jpayne@1
|
34235 </Hit>
|
jpayne@1
|
34236 </Iteration_hits>
|
jpayne@1
|
34237 <Iteration_stat>
|
jpayne@1
|
34238 <Statistics>
|
jpayne@1
|
34239 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34240 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34241 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34242 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34243 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34244 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34245 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34246 </Statistics>
|
jpayne@1
|
34247 </Iteration_stat>
|
jpayne@1
|
34248 </Iteration>
|
jpayne@1
|
34249 <Iteration>
|
jpayne@1
|
34250 <Iteration_iter-num>666</Iteration_iter-num>
|
jpayne@1
|
34251 <Iteration_query-ID>Query_666</Iteration_query-ID>
|
jpayne@1
|
34252 <Iteration_query-def>fljB_1,2_Newportstr_AUQQ01000002_1__1511</Iteration_query-def>
|
jpayne@1
|
34253 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34254 <Iteration_hits>
|
jpayne@1
|
34255 <Hit>
|
jpayne@1
|
34256 <Hit_num>1</Hit_num>
|
jpayne@1
|
34257 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34258 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34259 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34260 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34261 <Hit_hsps>
|
jpayne@1
|
34262 <Hsp>
|
jpayne@1
|
34263 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34264 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34265 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34266 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34267 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34268 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34269 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34270 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34271 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34272 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34273 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34274 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34275 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34276 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34277 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34278 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34279 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34280 </Hsp>
|
jpayne@1
|
34281 </Hit_hsps>
|
jpayne@1
|
34282 </Hit>
|
jpayne@1
|
34283 </Iteration_hits>
|
jpayne@1
|
34284 <Iteration_stat>
|
jpayne@1
|
34285 <Statistics>
|
jpayne@1
|
34286 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34287 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34288 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34289 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34290 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34291 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34292 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34293 </Statistics>
|
jpayne@1
|
34294 </Iteration_stat>
|
jpayne@1
|
34295 </Iteration>
|
jpayne@1
|
34296 <Iteration>
|
jpayne@1
|
34297 <Iteration_iter-num>667</Iteration_iter-num>
|
jpayne@1
|
34298 <Iteration_query-ID>Query_667</Iteration_query-ID>
|
jpayne@1
|
34299 <Iteration_query-def>fljB_1,2_Newportstr_AUQP01000016_1__1511</Iteration_query-def>
|
jpayne@1
|
34300 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34301 <Iteration_hits>
|
jpayne@1
|
34302 <Hit>
|
jpayne@1
|
34303 <Hit_num>1</Hit_num>
|
jpayne@1
|
34304 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34305 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34306 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34307 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34308 <Hit_hsps>
|
jpayne@1
|
34309 <Hsp>
|
jpayne@1
|
34310 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34311 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34312 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34313 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34314 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34315 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34316 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34317 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34318 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34319 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34320 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34321 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34322 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34323 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34324 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34325 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34326 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34327 </Hsp>
|
jpayne@1
|
34328 </Hit_hsps>
|
jpayne@1
|
34329 </Hit>
|
jpayne@1
|
34330 </Iteration_hits>
|
jpayne@1
|
34331 <Iteration_stat>
|
jpayne@1
|
34332 <Statistics>
|
jpayne@1
|
34333 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34334 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34335 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34336 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34337 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34338 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34339 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34340 </Statistics>
|
jpayne@1
|
34341 </Iteration_stat>
|
jpayne@1
|
34342 </Iteration>
|
jpayne@1
|
34343 <Iteration>
|
jpayne@1
|
34344 <Iteration_iter-num>668</Iteration_iter-num>
|
jpayne@1
|
34345 <Iteration_query-ID>Query_668</Iteration_query-ID>
|
jpayne@1
|
34346 <Iteration_query-def>fljB_1,2_Newportstr_AYDM01000071_1__1511</Iteration_query-def>
|
jpayne@1
|
34347 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34348 <Iteration_hits>
|
jpayne@1
|
34349 <Hit>
|
jpayne@1
|
34350 <Hit_num>1</Hit_num>
|
jpayne@1
|
34351 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34352 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34353 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34354 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34355 <Hit_hsps>
|
jpayne@1
|
34356 <Hsp>
|
jpayne@1
|
34357 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34358 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34359 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34360 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34361 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34362 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34363 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34364 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34365 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34366 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34367 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34368 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34369 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34370 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34371 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34372 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34373 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34374 </Hsp>
|
jpayne@1
|
34375 </Hit_hsps>
|
jpayne@1
|
34376 </Hit>
|
jpayne@1
|
34377 </Iteration_hits>
|
jpayne@1
|
34378 <Iteration_stat>
|
jpayne@1
|
34379 <Statistics>
|
jpayne@1
|
34380 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34381 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34382 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34383 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34384 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34385 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34386 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34387 </Statistics>
|
jpayne@1
|
34388 </Iteration_stat>
|
jpayne@1
|
34389 </Iteration>
|
jpayne@1
|
34390 <Iteration>
|
jpayne@1
|
34391 <Iteration_iter-num>669</Iteration_iter-num>
|
jpayne@1
|
34392 <Iteration_query-ID>Query_669</Iteration_query-ID>
|
jpayne@1
|
34393 <Iteration_query-def>fljB_1,2_Newportstr_AHUB01000037_1__1511</Iteration_query-def>
|
jpayne@1
|
34394 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34395 <Iteration_hits>
|
jpayne@1
|
34396 <Hit>
|
jpayne@1
|
34397 <Hit_num>1</Hit_num>
|
jpayne@1
|
34398 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34399 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34400 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34401 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34402 <Hit_hsps>
|
jpayne@1
|
34403 <Hsp>
|
jpayne@1
|
34404 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34405 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34406 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34407 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34408 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34409 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34410 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34411 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34412 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34413 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34414 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34415 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34416 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34417 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34418 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34419 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34420 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34421 </Hsp>
|
jpayne@1
|
34422 </Hit_hsps>
|
jpayne@1
|
34423 </Hit>
|
jpayne@1
|
34424 </Iteration_hits>
|
jpayne@1
|
34425 <Iteration_stat>
|
jpayne@1
|
34426 <Statistics>
|
jpayne@1
|
34427 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34428 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34429 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34430 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34431 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34432 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34433 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34434 </Statistics>
|
jpayne@1
|
34435 </Iteration_stat>
|
jpayne@1
|
34436 </Iteration>
|
jpayne@1
|
34437 <Iteration>
|
jpayne@1
|
34438 <Iteration_iter-num>670</Iteration_iter-num>
|
jpayne@1
|
34439 <Iteration_query-ID>Query_670</Iteration_query-ID>
|
jpayne@1
|
34440 <Iteration_query-def>fljB_1,2_Newportstr_AHTP01000026_1__1511</Iteration_query-def>
|
jpayne@1
|
34441 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34442 <Iteration_hits>
|
jpayne@1
|
34443 <Hit>
|
jpayne@1
|
34444 <Hit_num>1</Hit_num>
|
jpayne@1
|
34445 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34446 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34447 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34448 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34449 <Hit_hsps>
|
jpayne@1
|
34450 <Hsp>
|
jpayne@1
|
34451 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34452 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34453 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34454 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34455 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34456 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34457 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34458 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34459 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34460 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34461 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34462 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34463 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34464 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34465 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34466 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34467 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34468 </Hsp>
|
jpayne@1
|
34469 </Hit_hsps>
|
jpayne@1
|
34470 </Hit>
|
jpayne@1
|
34471 </Iteration_hits>
|
jpayne@1
|
34472 <Iteration_stat>
|
jpayne@1
|
34473 <Statistics>
|
jpayne@1
|
34474 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34475 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34476 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34477 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34478 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34479 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34480 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34481 </Statistics>
|
jpayne@1
|
34482 </Iteration_stat>
|
jpayne@1
|
34483 </Iteration>
|
jpayne@1
|
34484 <Iteration>
|
jpayne@1
|
34485 <Iteration_iter-num>671</Iteration_iter-num>
|
jpayne@1
|
34486 <Iteration_query-ID>Query_671</Iteration_query-ID>
|
jpayne@1
|
34487 <Iteration_query-def>fljB_1,2_Newportstr_AHTQ01000031_1__1511</Iteration_query-def>
|
jpayne@1
|
34488 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34489 <Iteration_hits>
|
jpayne@1
|
34490 <Hit>
|
jpayne@1
|
34491 <Hit_num>1</Hit_num>
|
jpayne@1
|
34492 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34493 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34494 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34495 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34496 <Hit_hsps>
|
jpayne@1
|
34497 <Hsp>
|
jpayne@1
|
34498 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34499 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34500 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34501 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34502 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34503 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34504 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34505 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34506 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34507 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34508 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34509 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34510 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34511 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34512 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34513 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34514 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34515 </Hsp>
|
jpayne@1
|
34516 </Hit_hsps>
|
jpayne@1
|
34517 </Hit>
|
jpayne@1
|
34518 </Iteration_hits>
|
jpayne@1
|
34519 <Iteration_stat>
|
jpayne@1
|
34520 <Statistics>
|
jpayne@1
|
34521 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34522 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34523 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34524 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34525 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34526 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34527 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34528 </Statistics>
|
jpayne@1
|
34529 </Iteration_stat>
|
jpayne@1
|
34530 </Iteration>
|
jpayne@1
|
34531 <Iteration>
|
jpayne@1
|
34532 <Iteration_iter-num>672</Iteration_iter-num>
|
jpayne@1
|
34533 <Iteration_query-ID>Query_672</Iteration_query-ID>
|
jpayne@1
|
34534 <Iteration_query-def>fljB_1,2_Newportstr_AHUE01000047_1__1511</Iteration_query-def>
|
jpayne@1
|
34535 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34536 <Iteration_hits>
|
jpayne@1
|
34537 <Hit>
|
jpayne@1
|
34538 <Hit_num>1</Hit_num>
|
jpayne@1
|
34539 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34540 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34541 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34542 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34543 <Hit_hsps>
|
jpayne@1
|
34544 <Hsp>
|
jpayne@1
|
34545 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34546 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34547 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34548 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34549 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34550 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34551 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34552 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34553 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34554 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34555 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34556 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34557 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34558 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34559 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34560 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34561 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34562 </Hsp>
|
jpayne@1
|
34563 </Hit_hsps>
|
jpayne@1
|
34564 </Hit>
|
jpayne@1
|
34565 </Iteration_hits>
|
jpayne@1
|
34566 <Iteration_stat>
|
jpayne@1
|
34567 <Statistics>
|
jpayne@1
|
34568 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34569 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34570 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34571 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34572 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34573 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34574 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34575 </Statistics>
|
jpayne@1
|
34576 </Iteration_stat>
|
jpayne@1
|
34577 </Iteration>
|
jpayne@1
|
34578 <Iteration>
|
jpayne@1
|
34579 <Iteration_iter-num>673</Iteration_iter-num>
|
jpayne@1
|
34580 <Iteration_query-ID>Query_673</Iteration_query-ID>
|
jpayne@1
|
34581 <Iteration_query-def>fljB_1,2_Newportstr_AHUF01000051_1__1511</Iteration_query-def>
|
jpayne@1
|
34582 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34583 <Iteration_hits>
|
jpayne@1
|
34584 <Hit>
|
jpayne@1
|
34585 <Hit_num>1</Hit_num>
|
jpayne@1
|
34586 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34587 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34588 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34589 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34590 <Hit_hsps>
|
jpayne@1
|
34591 <Hsp>
|
jpayne@1
|
34592 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34593 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34594 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34595 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34596 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34597 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34598 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34599 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34600 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34601 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34602 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34603 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34604 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34605 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34606 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34607 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34608 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34609 </Hsp>
|
jpayne@1
|
34610 </Hit_hsps>
|
jpayne@1
|
34611 </Hit>
|
jpayne@1
|
34612 </Iteration_hits>
|
jpayne@1
|
34613 <Iteration_stat>
|
jpayne@1
|
34614 <Statistics>
|
jpayne@1
|
34615 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34616 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34617 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34618 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34619 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34620 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34621 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34622 </Statistics>
|
jpayne@1
|
34623 </Iteration_stat>
|
jpayne@1
|
34624 </Iteration>
|
jpayne@1
|
34625 <Iteration>
|
jpayne@1
|
34626 <Iteration_iter-num>674</Iteration_iter-num>
|
jpayne@1
|
34627 <Iteration_query-ID>Query_674</Iteration_query-ID>
|
jpayne@1
|
34628 <Iteration_query-def>fljB_1,2_Newportstr_AHTR01000013_1__1511</Iteration_query-def>
|
jpayne@1
|
34629 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34630 <Iteration_hits>
|
jpayne@1
|
34631 <Hit>
|
jpayne@1
|
34632 <Hit_num>1</Hit_num>
|
jpayne@1
|
34633 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34634 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34635 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34636 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34637 <Hit_hsps>
|
jpayne@1
|
34638 <Hsp>
|
jpayne@1
|
34639 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34640 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34641 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34642 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34643 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34644 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34645 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34646 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34647 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34648 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34649 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34650 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34651 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34652 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34653 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34654 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34655 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34656 </Hsp>
|
jpayne@1
|
34657 </Hit_hsps>
|
jpayne@1
|
34658 </Hit>
|
jpayne@1
|
34659 </Iteration_hits>
|
jpayne@1
|
34660 <Iteration_stat>
|
jpayne@1
|
34661 <Statistics>
|
jpayne@1
|
34662 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34663 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34664 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34665 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34666 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34667 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34668 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34669 </Statistics>
|
jpayne@1
|
34670 </Iteration_stat>
|
jpayne@1
|
34671 </Iteration>
|
jpayne@1
|
34672 <Iteration>
|
jpayne@1
|
34673 <Iteration_iter-num>675</Iteration_iter-num>
|
jpayne@1
|
34674 <Iteration_query-ID>Query_675</Iteration_query-ID>
|
jpayne@1
|
34675 <Iteration_query-def>fljB_1,2_Newportstr_AHUD01000057_1__1511</Iteration_query-def>
|
jpayne@1
|
34676 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34677 <Iteration_hits>
|
jpayne@1
|
34678 <Hit>
|
jpayne@1
|
34679 <Hit_num>1</Hit_num>
|
jpayne@1
|
34680 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34681 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34682 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34683 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34684 <Hit_hsps>
|
jpayne@1
|
34685 <Hsp>
|
jpayne@1
|
34686 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34687 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34688 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34689 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34690 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34691 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34692 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34693 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34694 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34695 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34696 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34697 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34698 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34699 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34700 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34701 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34702 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34703 </Hsp>
|
jpayne@1
|
34704 </Hit_hsps>
|
jpayne@1
|
34705 </Hit>
|
jpayne@1
|
34706 </Iteration_hits>
|
jpayne@1
|
34707 <Iteration_stat>
|
jpayne@1
|
34708 <Statistics>
|
jpayne@1
|
34709 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34710 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34711 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34712 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34713 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34714 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34715 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34716 </Statistics>
|
jpayne@1
|
34717 </Iteration_stat>
|
jpayne@1
|
34718 </Iteration>
|
jpayne@1
|
34719 <Iteration>
|
jpayne@1
|
34720 <Iteration_iter-num>676</Iteration_iter-num>
|
jpayne@1
|
34721 <Iteration_query-ID>Query_676</Iteration_query-ID>
|
jpayne@1
|
34722 <Iteration_query-def>fljB_1,2_Newportstr_AHTV01000035_1__1511</Iteration_query-def>
|
jpayne@1
|
34723 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34724 <Iteration_hits>
|
jpayne@1
|
34725 <Hit>
|
jpayne@1
|
34726 <Hit_num>1</Hit_num>
|
jpayne@1
|
34727 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34728 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34729 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34730 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34731 <Hit_hsps>
|
jpayne@1
|
34732 <Hsp>
|
jpayne@1
|
34733 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34734 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34735 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34736 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34737 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34738 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34739 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34740 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34741 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34742 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34743 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34744 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34745 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34746 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34747 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34748 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34749 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34750 </Hsp>
|
jpayne@1
|
34751 </Hit_hsps>
|
jpayne@1
|
34752 </Hit>
|
jpayne@1
|
34753 </Iteration_hits>
|
jpayne@1
|
34754 <Iteration_stat>
|
jpayne@1
|
34755 <Statistics>
|
jpayne@1
|
34756 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34757 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34758 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34759 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34760 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34761 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34762 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34763 </Statistics>
|
jpayne@1
|
34764 </Iteration_stat>
|
jpayne@1
|
34765 </Iteration>
|
jpayne@1
|
34766 <Iteration>
|
jpayne@1
|
34767 <Iteration_iter-num>677</Iteration_iter-num>
|
jpayne@1
|
34768 <Iteration_query-ID>Query_677</Iteration_query-ID>
|
jpayne@1
|
34769 <Iteration_query-def>fljB_1,2_Newportstr_AHTL01000056_1__1511</Iteration_query-def>
|
jpayne@1
|
34770 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34771 <Iteration_hits>
|
jpayne@1
|
34772 <Hit>
|
jpayne@1
|
34773 <Hit_num>1</Hit_num>
|
jpayne@1
|
34774 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34775 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34776 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34777 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34778 <Hit_hsps>
|
jpayne@1
|
34779 <Hsp>
|
jpayne@1
|
34780 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34781 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34782 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34783 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34784 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34785 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34786 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34787 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34788 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34789 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34790 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34791 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34792 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34793 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34794 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34795 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34796 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34797 </Hsp>
|
jpayne@1
|
34798 </Hit_hsps>
|
jpayne@1
|
34799 </Hit>
|
jpayne@1
|
34800 </Iteration_hits>
|
jpayne@1
|
34801 <Iteration_stat>
|
jpayne@1
|
34802 <Statistics>
|
jpayne@1
|
34803 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34804 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34805 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34806 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34807 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34808 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34809 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34810 </Statistics>
|
jpayne@1
|
34811 </Iteration_stat>
|
jpayne@1
|
34812 </Iteration>
|
jpayne@1
|
34813 <Iteration>
|
jpayne@1
|
34814 <Iteration_iter-num>678</Iteration_iter-num>
|
jpayne@1
|
34815 <Iteration_query-ID>Query_678</Iteration_query-ID>
|
jpayne@1
|
34816 <Iteration_query-def>fljB_1,2_Newportstr_AHTT01000014_1__1511</Iteration_query-def>
|
jpayne@1
|
34817 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34818 <Iteration_hits>
|
jpayne@1
|
34819 <Hit>
|
jpayne@1
|
34820 <Hit_num>1</Hit_num>
|
jpayne@1
|
34821 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34822 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34823 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34824 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34825 <Hit_hsps>
|
jpayne@1
|
34826 <Hsp>
|
jpayne@1
|
34827 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34828 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34829 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34830 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34831 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34832 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34833 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34834 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34835 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34836 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34837 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34838 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34839 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34840 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34841 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34842 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34843 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34844 </Hsp>
|
jpayne@1
|
34845 </Hit_hsps>
|
jpayne@1
|
34846 </Hit>
|
jpayne@1
|
34847 </Iteration_hits>
|
jpayne@1
|
34848 <Iteration_stat>
|
jpayne@1
|
34849 <Statistics>
|
jpayne@1
|
34850 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34851 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34852 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34853 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34854 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34855 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34856 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34857 </Statistics>
|
jpayne@1
|
34858 </Iteration_stat>
|
jpayne@1
|
34859 </Iteration>
|
jpayne@1
|
34860 <Iteration>
|
jpayne@1
|
34861 <Iteration_iter-num>679</Iteration_iter-num>
|
jpayne@1
|
34862 <Iteration_query-ID>Query_679</Iteration_query-ID>
|
jpayne@1
|
34863 <Iteration_query-def>fljB_1,2_Newportstr_AHUA01000025_1__1511</Iteration_query-def>
|
jpayne@1
|
34864 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34865 <Iteration_hits>
|
jpayne@1
|
34866 <Hit>
|
jpayne@1
|
34867 <Hit_num>1</Hit_num>
|
jpayne@1
|
34868 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34869 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34870 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34871 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34872 <Hit_hsps>
|
jpayne@1
|
34873 <Hsp>
|
jpayne@1
|
34874 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34875 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34876 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34877 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34878 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34879 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34880 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34881 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34882 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34883 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34884 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34885 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34886 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34887 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34888 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34889 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34890 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34891 </Hsp>
|
jpayne@1
|
34892 </Hit_hsps>
|
jpayne@1
|
34893 </Hit>
|
jpayne@1
|
34894 </Iteration_hits>
|
jpayne@1
|
34895 <Iteration_stat>
|
jpayne@1
|
34896 <Statistics>
|
jpayne@1
|
34897 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34898 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34899 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34900 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34901 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34902 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34903 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34904 </Statistics>
|
jpayne@1
|
34905 </Iteration_stat>
|
jpayne@1
|
34906 </Iteration>
|
jpayne@1
|
34907 <Iteration>
|
jpayne@1
|
34908 <Iteration_iter-num>680</Iteration_iter-num>
|
jpayne@1
|
34909 <Iteration_query-ID>Query_680</Iteration_query-ID>
|
jpayne@1
|
34910 <Iteration_query-def>fljB_1,2_Newportstr_AHTW01000052_1__1511</Iteration_query-def>
|
jpayne@1
|
34911 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34912 <Iteration_hits>
|
jpayne@1
|
34913 <Hit>
|
jpayne@1
|
34914 <Hit_num>1</Hit_num>
|
jpayne@1
|
34915 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34916 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34917 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34918 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34919 <Hit_hsps>
|
jpayne@1
|
34920 <Hsp>
|
jpayne@1
|
34921 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34922 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34923 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34924 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34925 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34926 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34927 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34928 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34929 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34930 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34931 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34932 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34933 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34934 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34935 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34936 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34937 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34938 </Hsp>
|
jpayne@1
|
34939 </Hit_hsps>
|
jpayne@1
|
34940 </Hit>
|
jpayne@1
|
34941 </Iteration_hits>
|
jpayne@1
|
34942 <Iteration_stat>
|
jpayne@1
|
34943 <Statistics>
|
jpayne@1
|
34944 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34945 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34946 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34947 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34948 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34949 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34950 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34951 </Statistics>
|
jpayne@1
|
34952 </Iteration_stat>
|
jpayne@1
|
34953 </Iteration>
|
jpayne@1
|
34954 <Iteration>
|
jpayne@1
|
34955 <Iteration_iter-num>681</Iteration_iter-num>
|
jpayne@1
|
34956 <Iteration_query-ID>Query_681</Iteration_query-ID>
|
jpayne@1
|
34957 <Iteration_query-def>fljB_1,2_Newportstr_AHTU01000008_1__1511</Iteration_query-def>
|
jpayne@1
|
34958 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
34959 <Iteration_hits>
|
jpayne@1
|
34960 <Hit>
|
jpayne@1
|
34961 <Hit_num>1</Hit_num>
|
jpayne@1
|
34962 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
34963 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
34964 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
34965 <Hit_len>1962</Hit_len>
|
jpayne@1
|
34966 <Hit_hsps>
|
jpayne@1
|
34967 <Hsp>
|
jpayne@1
|
34968 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
34969 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
34970 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
34971 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
34972 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
34973 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
34974 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
34975 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
34976 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
34977 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
34978 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
34979 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
34980 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
34981 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
34982 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
34983 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
34984 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
34985 </Hsp>
|
jpayne@1
|
34986 </Hit_hsps>
|
jpayne@1
|
34987 </Hit>
|
jpayne@1
|
34988 </Iteration_hits>
|
jpayne@1
|
34989 <Iteration_stat>
|
jpayne@1
|
34990 <Statistics>
|
jpayne@1
|
34991 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
34992 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
34993 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
34994 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
34995 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
34996 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
34997 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
34998 </Statistics>
|
jpayne@1
|
34999 </Iteration_stat>
|
jpayne@1
|
35000 </Iteration>
|
jpayne@1
|
35001 <Iteration>
|
jpayne@1
|
35002 <Iteration_iter-num>682</Iteration_iter-num>
|
jpayne@1
|
35003 <Iteration_query-ID>Query_682</Iteration_query-ID>
|
jpayne@1
|
35004 <Iteration_query-def>fljB_1,2_Newportstr_AHTM01000016_1__1511</Iteration_query-def>
|
jpayne@1
|
35005 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35006 <Iteration_hits>
|
jpayne@1
|
35007 <Hit>
|
jpayne@1
|
35008 <Hit_num>1</Hit_num>
|
jpayne@1
|
35009 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35010 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35011 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35012 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35013 <Hit_hsps>
|
jpayne@1
|
35014 <Hsp>
|
jpayne@1
|
35015 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35016 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35017 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35018 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35019 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35020 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35021 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35022 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35023 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35024 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35025 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35026 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35027 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35028 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35029 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35030 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35031 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35032 </Hsp>
|
jpayne@1
|
35033 </Hit_hsps>
|
jpayne@1
|
35034 </Hit>
|
jpayne@1
|
35035 </Iteration_hits>
|
jpayne@1
|
35036 <Iteration_stat>
|
jpayne@1
|
35037 <Statistics>
|
jpayne@1
|
35038 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35039 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35040 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35041 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35042 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35043 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35044 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35045 </Statistics>
|
jpayne@1
|
35046 </Iteration_stat>
|
jpayne@1
|
35047 </Iteration>
|
jpayne@1
|
35048 <Iteration>
|
jpayne@1
|
35049 <Iteration_iter-num>683</Iteration_iter-num>
|
jpayne@1
|
35050 <Iteration_query-ID>Query_683</Iteration_query-ID>
|
jpayne@1
|
35051 <Iteration_query-def>fljB_1,2_Newportstr_AHTJ01000021_1__1511</Iteration_query-def>
|
jpayne@1
|
35052 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35053 <Iteration_hits>
|
jpayne@1
|
35054 <Hit>
|
jpayne@1
|
35055 <Hit_num>1</Hit_num>
|
jpayne@1
|
35056 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35057 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35058 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35059 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35060 <Hit_hsps>
|
jpayne@1
|
35061 <Hsp>
|
jpayne@1
|
35062 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35063 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35064 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35065 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35066 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35067 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35068 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35069 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35070 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35071 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35072 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35073 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35074 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35075 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35076 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35077 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35078 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35079 </Hsp>
|
jpayne@1
|
35080 </Hit_hsps>
|
jpayne@1
|
35081 </Hit>
|
jpayne@1
|
35082 </Iteration_hits>
|
jpayne@1
|
35083 <Iteration_stat>
|
jpayne@1
|
35084 <Statistics>
|
jpayne@1
|
35085 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35086 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35087 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35088 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35089 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35090 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35091 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35092 </Statistics>
|
jpayne@1
|
35093 </Iteration_stat>
|
jpayne@1
|
35094 </Iteration>
|
jpayne@1
|
35095 <Iteration>
|
jpayne@1
|
35096 <Iteration_iter-num>684</Iteration_iter-num>
|
jpayne@1
|
35097 <Iteration_query-ID>Query_684</Iteration_query-ID>
|
jpayne@1
|
35098 <Iteration_query-def>fljB_1,2_Newportstr_AHTN01000022_1__1511</Iteration_query-def>
|
jpayne@1
|
35099 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35100 <Iteration_hits>
|
jpayne@1
|
35101 <Hit>
|
jpayne@1
|
35102 <Hit_num>1</Hit_num>
|
jpayne@1
|
35103 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35104 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35105 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35106 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35107 <Hit_hsps>
|
jpayne@1
|
35108 <Hsp>
|
jpayne@1
|
35109 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35110 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35111 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35112 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35113 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35114 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35115 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35116 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35117 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35118 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35119 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35120 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35121 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35122 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35123 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35124 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35125 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35126 </Hsp>
|
jpayne@1
|
35127 </Hit_hsps>
|
jpayne@1
|
35128 </Hit>
|
jpayne@1
|
35129 </Iteration_hits>
|
jpayne@1
|
35130 <Iteration_stat>
|
jpayne@1
|
35131 <Statistics>
|
jpayne@1
|
35132 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35133 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35134 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35135 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35136 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35137 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35138 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35139 </Statistics>
|
jpayne@1
|
35140 </Iteration_stat>
|
jpayne@1
|
35141 </Iteration>
|
jpayne@1
|
35142 <Iteration>
|
jpayne@1
|
35143 <Iteration_iter-num>685</Iteration_iter-num>
|
jpayne@1
|
35144 <Iteration_query-ID>Query_685</Iteration_query-ID>
|
jpayne@1
|
35145 <Iteration_query-def>fljB_1,2_Newportstr_AHTK01000007_1__1511</Iteration_query-def>
|
jpayne@1
|
35146 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35147 <Iteration_hits>
|
jpayne@1
|
35148 <Hit>
|
jpayne@1
|
35149 <Hit_num>1</Hit_num>
|
jpayne@1
|
35150 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35151 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35152 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35153 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35154 <Hit_hsps>
|
jpayne@1
|
35155 <Hsp>
|
jpayne@1
|
35156 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35157 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35158 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35159 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35160 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35161 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35162 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35163 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35164 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35165 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35166 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35167 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35168 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35169 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35170 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35171 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35172 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35173 </Hsp>
|
jpayne@1
|
35174 </Hit_hsps>
|
jpayne@1
|
35175 </Hit>
|
jpayne@1
|
35176 </Iteration_hits>
|
jpayne@1
|
35177 <Iteration_stat>
|
jpayne@1
|
35178 <Statistics>
|
jpayne@1
|
35179 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35180 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35181 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35182 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35183 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35184 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35185 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35186 </Statistics>
|
jpayne@1
|
35187 </Iteration_stat>
|
jpayne@1
|
35188 </Iteration>
|
jpayne@1
|
35189 <Iteration>
|
jpayne@1
|
35190 <Iteration_iter-num>686</Iteration_iter-num>
|
jpayne@1
|
35191 <Iteration_query-ID>Query_686</Iteration_query-ID>
|
jpayne@1
|
35192 <Iteration_query-def>fljB_1,2_Newportstr_AHUC01000029_1__1511</Iteration_query-def>
|
jpayne@1
|
35193 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35194 <Iteration_hits>
|
jpayne@1
|
35195 <Hit>
|
jpayne@1
|
35196 <Hit_num>1</Hit_num>
|
jpayne@1
|
35197 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35198 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35199 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35200 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35201 <Hit_hsps>
|
jpayne@1
|
35202 <Hsp>
|
jpayne@1
|
35203 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35204 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35205 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35206 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35207 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35208 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35209 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35210 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35211 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35212 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35213 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35214 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35215 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35216 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35217 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35218 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35219 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35220 </Hsp>
|
jpayne@1
|
35221 </Hit_hsps>
|
jpayne@1
|
35222 </Hit>
|
jpayne@1
|
35223 </Iteration_hits>
|
jpayne@1
|
35224 <Iteration_stat>
|
jpayne@1
|
35225 <Statistics>
|
jpayne@1
|
35226 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35227 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35228 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35229 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35230 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35231 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35232 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35233 </Statistics>
|
jpayne@1
|
35234 </Iteration_stat>
|
jpayne@1
|
35235 </Iteration>
|
jpayne@1
|
35236 <Iteration>
|
jpayne@1
|
35237 <Iteration_iter-num>687</Iteration_iter-num>
|
jpayne@1
|
35238 <Iteration_query-ID>Query_687</Iteration_query-ID>
|
jpayne@1
|
35239 <Iteration_query-def>fljB_1,2_Newportstr_AHTZ01000054_1__1511</Iteration_query-def>
|
jpayne@1
|
35240 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35241 <Iteration_hits>
|
jpayne@1
|
35242 <Hit>
|
jpayne@1
|
35243 <Hit_num>1</Hit_num>
|
jpayne@1
|
35244 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35245 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35246 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35247 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35248 <Hit_hsps>
|
jpayne@1
|
35249 <Hsp>
|
jpayne@1
|
35250 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35251 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35252 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35253 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35254 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35255 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35256 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35257 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35258 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35259 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35260 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35261 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35262 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35263 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35264 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35265 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35266 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35267 </Hsp>
|
jpayne@1
|
35268 </Hit_hsps>
|
jpayne@1
|
35269 </Hit>
|
jpayne@1
|
35270 </Iteration_hits>
|
jpayne@1
|
35271 <Iteration_stat>
|
jpayne@1
|
35272 <Statistics>
|
jpayne@1
|
35273 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35274 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35275 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35276 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35277 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35278 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35279 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35280 </Statistics>
|
jpayne@1
|
35281 </Iteration_stat>
|
jpayne@1
|
35282 </Iteration>
|
jpayne@1
|
35283 <Iteration>
|
jpayne@1
|
35284 <Iteration_iter-num>688</Iteration_iter-num>
|
jpayne@1
|
35285 <Iteration_query-ID>Query_688</Iteration_query-ID>
|
jpayne@1
|
35286 <Iteration_query-def>fljB_1,2_Newportstr_AHTY01000074_1__1511</Iteration_query-def>
|
jpayne@1
|
35287 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35288 <Iteration_hits>
|
jpayne@1
|
35289 <Hit>
|
jpayne@1
|
35290 <Hit_num>1</Hit_num>
|
jpayne@1
|
35291 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35292 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35293 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35294 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35295 <Hit_hsps>
|
jpayne@1
|
35296 <Hsp>
|
jpayne@1
|
35297 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35298 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35299 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35300 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35301 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35302 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35303 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35304 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35305 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35306 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35307 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35308 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35309 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35310 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35311 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35312 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35313 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35314 </Hsp>
|
jpayne@1
|
35315 </Hit_hsps>
|
jpayne@1
|
35316 </Hit>
|
jpayne@1
|
35317 </Iteration_hits>
|
jpayne@1
|
35318 <Iteration_stat>
|
jpayne@1
|
35319 <Statistics>
|
jpayne@1
|
35320 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35321 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35322 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35323 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35324 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35325 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35326 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35327 </Statistics>
|
jpayne@1
|
35328 </Iteration_stat>
|
jpayne@1
|
35329 </Iteration>
|
jpayne@1
|
35330 <Iteration>
|
jpayne@1
|
35331 <Iteration_iter-num>689</Iteration_iter-num>
|
jpayne@1
|
35332 <Iteration_query-ID>Query_689</Iteration_query-ID>
|
jpayne@1
|
35333 <Iteration_query-def>fljB_1,2_Newportstr_AOGH01000019_1__1511</Iteration_query-def>
|
jpayne@1
|
35334 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35335 <Iteration_hits>
|
jpayne@1
|
35336 <Hit>
|
jpayne@1
|
35337 <Hit_num>1</Hit_num>
|
jpayne@1
|
35338 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35339 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35340 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35341 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35342 <Hit_hsps>
|
jpayne@1
|
35343 <Hsp>
|
jpayne@1
|
35344 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35345 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35346 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35347 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35348 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35349 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35350 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35351 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35352 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35353 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35354 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35355 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35356 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35357 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35358 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35359 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35360 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35361 </Hsp>
|
jpayne@1
|
35362 </Hit_hsps>
|
jpayne@1
|
35363 </Hit>
|
jpayne@1
|
35364 </Iteration_hits>
|
jpayne@1
|
35365 <Iteration_stat>
|
jpayne@1
|
35366 <Statistics>
|
jpayne@1
|
35367 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35368 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35369 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35370 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35371 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35372 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35373 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35374 </Statistics>
|
jpayne@1
|
35375 </Iteration_stat>
|
jpayne@1
|
35376 </Iteration>
|
jpayne@1
|
35377 <Iteration>
|
jpayne@1
|
35378 <Iteration_iter-num>690</Iteration_iter-num>
|
jpayne@1
|
35379 <Iteration_query-ID>Query_690</Iteration_query-ID>
|
jpayne@1
|
35380 <Iteration_query-def>fljB_1,2_Newportstr_AJMO01000050_1__1511</Iteration_query-def>
|
jpayne@1
|
35381 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35382 <Iteration_hits>
|
jpayne@1
|
35383 <Hit>
|
jpayne@1
|
35384 <Hit_num>1</Hit_num>
|
jpayne@1
|
35385 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35386 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35387 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35388 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35389 <Hit_hsps>
|
jpayne@1
|
35390 <Hsp>
|
jpayne@1
|
35391 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35392 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
35393 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
35394 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
35395 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35396 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35397 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35398 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35399 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35400 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35401 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
35402 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
35403 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
35404 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
35405 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35406 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35407 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35408 </Hsp>
|
jpayne@1
|
35409 </Hit_hsps>
|
jpayne@1
|
35410 </Hit>
|
jpayne@1
|
35411 </Iteration_hits>
|
jpayne@1
|
35412 <Iteration_stat>
|
jpayne@1
|
35413 <Statistics>
|
jpayne@1
|
35414 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35415 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35416 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35417 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35418 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35419 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35420 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35421 </Statistics>
|
jpayne@1
|
35422 </Iteration_stat>
|
jpayne@1
|
35423 </Iteration>
|
jpayne@1
|
35424 <Iteration>
|
jpayne@1
|
35425 <Iteration_iter-num>691</Iteration_iter-num>
|
jpayne@1
|
35426 <Iteration_query-ID>Query_691</Iteration_query-ID>
|
jpayne@1
|
35427 <Iteration_query-def>fljB_1,2_Newportstr_AYEB01000020_1__1511</Iteration_query-def>
|
jpayne@1
|
35428 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35429 <Iteration_hits>
|
jpayne@1
|
35430 <Hit>
|
jpayne@1
|
35431 <Hit_num>1</Hit_num>
|
jpayne@1
|
35432 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35433 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35434 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35435 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35436 <Hit_hsps>
|
jpayne@1
|
35437 <Hsp>
|
jpayne@1
|
35438 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35439 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35440 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35441 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35442 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35443 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35444 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35445 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35446 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35447 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35448 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35449 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35450 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35451 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35452 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35453 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35454 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35455 </Hsp>
|
jpayne@1
|
35456 </Hit_hsps>
|
jpayne@1
|
35457 </Hit>
|
jpayne@1
|
35458 </Iteration_hits>
|
jpayne@1
|
35459 <Iteration_stat>
|
jpayne@1
|
35460 <Statistics>
|
jpayne@1
|
35461 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35462 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35463 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35464 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35465 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35466 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35467 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35468 </Statistics>
|
jpayne@1
|
35469 </Iteration_stat>
|
jpayne@1
|
35470 </Iteration>
|
jpayne@1
|
35471 <Iteration>
|
jpayne@1
|
35472 <Iteration_iter-num>692</Iteration_iter-num>
|
jpayne@1
|
35473 <Iteration_query-ID>Query_692</Iteration_query-ID>
|
jpayne@1
|
35474 <Iteration_query-def>fljB_1,2_Newportstr_AYEA01000014_1__1511</Iteration_query-def>
|
jpayne@1
|
35475 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35476 <Iteration_hits>
|
jpayne@1
|
35477 <Hit>
|
jpayne@1
|
35478 <Hit_num>1</Hit_num>
|
jpayne@1
|
35479 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35480 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35481 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35482 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35483 <Hit_hsps>
|
jpayne@1
|
35484 <Hsp>
|
jpayne@1
|
35485 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35486 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35487 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35488 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35489 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35490 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35491 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35492 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35493 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35494 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35495 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35496 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35497 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35498 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35499 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35500 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35501 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35502 </Hsp>
|
jpayne@1
|
35503 </Hit_hsps>
|
jpayne@1
|
35504 </Hit>
|
jpayne@1
|
35505 </Iteration_hits>
|
jpayne@1
|
35506 <Iteration_stat>
|
jpayne@1
|
35507 <Statistics>
|
jpayne@1
|
35508 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35509 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35510 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35511 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35512 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35513 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35514 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35515 </Statistics>
|
jpayne@1
|
35516 </Iteration_stat>
|
jpayne@1
|
35517 </Iteration>
|
jpayne@1
|
35518 <Iteration>
|
jpayne@1
|
35519 <Iteration_iter-num>693</Iteration_iter-num>
|
jpayne@1
|
35520 <Iteration_query-ID>Query_693</Iteration_query-ID>
|
jpayne@1
|
35521 <Iteration_query-def>fljB_1,2_Newportstr_AYDZ01000021_1__1510</Iteration_query-def>
|
jpayne@1
|
35522 <Iteration_query-len>1510</Iteration_query-len>
|
jpayne@1
|
35523 <Iteration_hits>
|
jpayne@1
|
35524 <Hit>
|
jpayne@1
|
35525 <Hit_num>1</Hit_num>
|
jpayne@1
|
35526 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35527 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35528 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35529 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35530 <Hit_hsps>
|
jpayne@1
|
35531 <Hsp>
|
jpayne@1
|
35532 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35533 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35534 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35535 <Hsp_evalue>3.07932e-133</Hsp_evalue>
|
jpayne@1
|
35536 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35537 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35538 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35539 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35540 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35541 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35542 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35543 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35544 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35545 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35546 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35547 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35548 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35549 </Hsp>
|
jpayne@1
|
35550 </Hit_hsps>
|
jpayne@1
|
35551 </Hit>
|
jpayne@1
|
35552 </Iteration_hits>
|
jpayne@1
|
35553 <Iteration_stat>
|
jpayne@1
|
35554 <Statistics>
|
jpayne@1
|
35555 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35556 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35557 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35558 <Statistics_eff-space>81606432</Statistics_eff-space>
|
jpayne@1
|
35559 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35560 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35561 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35562 </Statistics>
|
jpayne@1
|
35563 </Iteration_stat>
|
jpayne@1
|
35564 </Iteration>
|
jpayne@1
|
35565 <Iteration>
|
jpayne@1
|
35566 <Iteration_iter-num>694</Iteration_iter-num>
|
jpayne@1
|
35567 <Iteration_query-ID>Query_694</Iteration_query-ID>
|
jpayne@1
|
35568 <Iteration_query-def>fljB_1,2_Newportstr_AYDY01000005_1__1511</Iteration_query-def>
|
jpayne@1
|
35569 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35570 <Iteration_hits>
|
jpayne@1
|
35571 <Hit>
|
jpayne@1
|
35572 <Hit_num>1</Hit_num>
|
jpayne@1
|
35573 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35574 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35575 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35576 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35577 <Hit_hsps>
|
jpayne@1
|
35578 <Hsp>
|
jpayne@1
|
35579 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35580 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35581 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35582 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35583 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35584 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35585 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35586 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35587 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35588 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35589 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35590 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35591 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35592 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35593 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35594 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35595 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35596 </Hsp>
|
jpayne@1
|
35597 </Hit_hsps>
|
jpayne@1
|
35598 </Hit>
|
jpayne@1
|
35599 </Iteration_hits>
|
jpayne@1
|
35600 <Iteration_stat>
|
jpayne@1
|
35601 <Statistics>
|
jpayne@1
|
35602 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35603 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35604 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35605 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35606 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35607 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35608 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35609 </Statistics>
|
jpayne@1
|
35610 </Iteration_stat>
|
jpayne@1
|
35611 </Iteration>
|
jpayne@1
|
35612 <Iteration>
|
jpayne@1
|
35613 <Iteration_iter-num>695</Iteration_iter-num>
|
jpayne@1
|
35614 <Iteration_query-ID>Query_695</Iteration_query-ID>
|
jpayne@1
|
35615 <Iteration_query-def>fljB_1,2_Newportstr_ABEW01000002_1__1511</Iteration_query-def>
|
jpayne@1
|
35616 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35617 <Iteration_hits>
|
jpayne@1
|
35618 <Hit>
|
jpayne@1
|
35619 <Hit_num>1</Hit_num>
|
jpayne@1
|
35620 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35621 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35622 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35623 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35624 <Hit_hsps>
|
jpayne@1
|
35625 <Hsp>
|
jpayne@1
|
35626 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35627 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35628 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35629 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35630 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35631 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35632 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35633 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35634 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35635 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35636 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35637 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35638 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35639 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35640 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35641 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35642 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35643 </Hsp>
|
jpayne@1
|
35644 </Hit_hsps>
|
jpayne@1
|
35645 </Hit>
|
jpayne@1
|
35646 </Iteration_hits>
|
jpayne@1
|
35647 <Iteration_stat>
|
jpayne@1
|
35648 <Statistics>
|
jpayne@1
|
35649 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35650 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35651 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35652 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35653 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35654 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35655 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35656 </Statistics>
|
jpayne@1
|
35657 </Iteration_stat>
|
jpayne@1
|
35658 </Iteration>
|
jpayne@1
|
35659 <Iteration>
|
jpayne@1
|
35660 <Iteration_iter-num>696</Iteration_iter-num>
|
jpayne@1
|
35661 <Iteration_query-ID>Query_696</Iteration_query-ID>
|
jpayne@1
|
35662 <Iteration_query-def>fljB_1,2_Newportstr_AYEI01000024_1__1511</Iteration_query-def>
|
jpayne@1
|
35663 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35664 <Iteration_hits>
|
jpayne@1
|
35665 <Hit>
|
jpayne@1
|
35666 <Hit_num>1</Hit_num>
|
jpayne@1
|
35667 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35668 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35669 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35670 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35671 <Hit_hsps>
|
jpayne@1
|
35672 <Hsp>
|
jpayne@1
|
35673 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35674 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35675 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35676 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35677 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35678 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35679 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35680 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35681 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35682 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35683 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35684 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35685 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35686 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35687 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35688 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35689 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35690 </Hsp>
|
jpayne@1
|
35691 </Hit_hsps>
|
jpayne@1
|
35692 </Hit>
|
jpayne@1
|
35693 </Iteration_hits>
|
jpayne@1
|
35694 <Iteration_stat>
|
jpayne@1
|
35695 <Statistics>
|
jpayne@1
|
35696 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35697 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35698 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35699 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35700 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35701 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35702 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35703 </Statistics>
|
jpayne@1
|
35704 </Iteration_stat>
|
jpayne@1
|
35705 </Iteration>
|
jpayne@1
|
35706 <Iteration>
|
jpayne@1
|
35707 <Iteration_iter-num>697</Iteration_iter-num>
|
jpayne@1
|
35708 <Iteration_query-ID>Query_697</Iteration_query-ID>
|
jpayne@1
|
35709 <Iteration_query-def>fljB_1,2_Newportstr_AYEH01000009_1__1511</Iteration_query-def>
|
jpayne@1
|
35710 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35711 <Iteration_hits>
|
jpayne@1
|
35712 <Hit>
|
jpayne@1
|
35713 <Hit_num>1</Hit_num>
|
jpayne@1
|
35714 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35715 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35716 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35717 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35718 <Hit_hsps>
|
jpayne@1
|
35719 <Hsp>
|
jpayne@1
|
35720 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35721 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35722 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35723 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35724 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35725 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35726 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35727 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35728 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35729 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35730 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35731 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35732 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35733 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35734 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35735 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35736 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35737 </Hsp>
|
jpayne@1
|
35738 </Hit_hsps>
|
jpayne@1
|
35739 </Hit>
|
jpayne@1
|
35740 </Iteration_hits>
|
jpayne@1
|
35741 <Iteration_stat>
|
jpayne@1
|
35742 <Statistics>
|
jpayne@1
|
35743 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35744 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35745 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35746 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35747 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35748 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35749 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35750 </Statistics>
|
jpayne@1
|
35751 </Iteration_stat>
|
jpayne@1
|
35752 </Iteration>
|
jpayne@1
|
35753 <Iteration>
|
jpayne@1
|
35754 <Iteration_iter-num>698</Iteration_iter-num>
|
jpayne@1
|
35755 <Iteration_query-ID>Query_698</Iteration_query-ID>
|
jpayne@1
|
35756 <Iteration_query-def>fljB_1,2_Newportstr_AYEG01000094_1__1511</Iteration_query-def>
|
jpayne@1
|
35757 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35758 <Iteration_hits>
|
jpayne@1
|
35759 <Hit>
|
jpayne@1
|
35760 <Hit_num>1</Hit_num>
|
jpayne@1
|
35761 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35762 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35763 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35764 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35765 <Hit_hsps>
|
jpayne@1
|
35766 <Hsp>
|
jpayne@1
|
35767 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35768 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35769 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35770 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35771 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35772 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35773 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35774 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35775 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35776 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35777 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35778 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35779 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35780 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35781 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35782 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35783 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35784 </Hsp>
|
jpayne@1
|
35785 </Hit_hsps>
|
jpayne@1
|
35786 </Hit>
|
jpayne@1
|
35787 </Iteration_hits>
|
jpayne@1
|
35788 <Iteration_stat>
|
jpayne@1
|
35789 <Statistics>
|
jpayne@1
|
35790 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35791 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35792 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35793 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35794 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35795 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35796 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35797 </Statistics>
|
jpayne@1
|
35798 </Iteration_stat>
|
jpayne@1
|
35799 </Iteration>
|
jpayne@1
|
35800 <Iteration>
|
jpayne@1
|
35801 <Iteration_iter-num>699</Iteration_iter-num>
|
jpayne@1
|
35802 <Iteration_query-ID>Query_699</Iteration_query-ID>
|
jpayne@1
|
35803 <Iteration_query-def>fljB_1,2_Newportstr_AYED01000019_1__1511</Iteration_query-def>
|
jpayne@1
|
35804 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35805 <Iteration_hits>
|
jpayne@1
|
35806 <Hit>
|
jpayne@1
|
35807 <Hit_num>1</Hit_num>
|
jpayne@1
|
35808 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35809 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35810 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35811 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35812 <Hit_hsps>
|
jpayne@1
|
35813 <Hsp>
|
jpayne@1
|
35814 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35815 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35816 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35817 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35818 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35819 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35820 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35821 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35822 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35823 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35824 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35825 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35826 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35827 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35828 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35829 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35830 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35831 </Hsp>
|
jpayne@1
|
35832 </Hit_hsps>
|
jpayne@1
|
35833 </Hit>
|
jpayne@1
|
35834 </Iteration_hits>
|
jpayne@1
|
35835 <Iteration_stat>
|
jpayne@1
|
35836 <Statistics>
|
jpayne@1
|
35837 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35838 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35839 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35840 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35841 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35842 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35843 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35844 </Statistics>
|
jpayne@1
|
35845 </Iteration_stat>
|
jpayne@1
|
35846 </Iteration>
|
jpayne@1
|
35847 <Iteration>
|
jpayne@1
|
35848 <Iteration_iter-num>700</Iteration_iter-num>
|
jpayne@1
|
35849 <Iteration_query-ID>Query_700</Iteration_query-ID>
|
jpayne@1
|
35850 <Iteration_query-def>fljB_1,2_Newportstr_AYEC01000044_1__1511</Iteration_query-def>
|
jpayne@1
|
35851 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35852 <Iteration_hits>
|
jpayne@1
|
35853 <Hit>
|
jpayne@1
|
35854 <Hit_num>1</Hit_num>
|
jpayne@1
|
35855 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35856 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35857 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35858 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35859 <Hit_hsps>
|
jpayne@1
|
35860 <Hsp>
|
jpayne@1
|
35861 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35862 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
35863 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
35864 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
35865 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35866 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35867 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35868 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35869 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35870 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35871 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
35872 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
35873 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
35874 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
35875 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35876 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35877 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35878 </Hsp>
|
jpayne@1
|
35879 </Hit_hsps>
|
jpayne@1
|
35880 </Hit>
|
jpayne@1
|
35881 </Iteration_hits>
|
jpayne@1
|
35882 <Iteration_stat>
|
jpayne@1
|
35883 <Statistics>
|
jpayne@1
|
35884 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35885 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35886 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35887 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35888 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35889 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35890 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35891 </Statistics>
|
jpayne@1
|
35892 </Iteration_stat>
|
jpayne@1
|
35893 </Iteration>
|
jpayne@1
|
35894 <Iteration>
|
jpayne@1
|
35895 <Iteration_iter-num>701</Iteration_iter-num>
|
jpayne@1
|
35896 <Iteration_query-ID>Query_701</Iteration_query-ID>
|
jpayne@1
|
35897 <Iteration_query-def>fljB_1,5_Panamastr_AOYJ01000008_1__1511</Iteration_query-def>
|
jpayne@1
|
35898 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35899 <Iteration_hits>
|
jpayne@1
|
35900 <Hit>
|
jpayne@1
|
35901 <Hit_num>1</Hit_num>
|
jpayne@1
|
35902 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35903 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35904 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35905 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35906 <Hit_hsps>
|
jpayne@1
|
35907 <Hsp>
|
jpayne@1
|
35908 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35909 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
35910 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
35911 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
35912 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35913 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35914 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35915 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35916 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35917 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35918 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
35919 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
35920 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
35921 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
35922 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATTGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAATACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35923 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35924 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | |||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35925 </Hsp>
|
jpayne@1
|
35926 </Hit_hsps>
|
jpayne@1
|
35927 </Hit>
|
jpayne@1
|
35928 </Iteration_hits>
|
jpayne@1
|
35929 <Iteration_stat>
|
jpayne@1
|
35930 <Statistics>
|
jpayne@1
|
35931 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35932 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35933 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35934 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35935 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35936 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35937 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35938 </Statistics>
|
jpayne@1
|
35939 </Iteration_stat>
|
jpayne@1
|
35940 </Iteration>
|
jpayne@1
|
35941 <Iteration>
|
jpayne@1
|
35942 <Iteration_iter-num>702</Iteration_iter-num>
|
jpayne@1
|
35943 <Iteration_query-ID>Query_702</Iteration_query-ID>
|
jpayne@1
|
35944 <Iteration_query-def>fljB_1,7_Pomonastr_AHIA01000072_1__1511</Iteration_query-def>
|
jpayne@1
|
35945 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
35946 <Iteration_hits>
|
jpayne@1
|
35947 <Hit>
|
jpayne@1
|
35948 <Hit_num>1</Hit_num>
|
jpayne@1
|
35949 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35950 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35951 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35952 <Hit_len>1962</Hit_len>
|
jpayne@1
|
35953 <Hit_hsps>
|
jpayne@1
|
35954 <Hsp>
|
jpayne@1
|
35955 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
35956 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
35957 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
35958 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
35959 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
35960 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
35961 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
35962 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
35963 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
35964 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
35965 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
35966 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
35967 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
35968 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
35969 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCGCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
35970 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
35971 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
35972 </Hsp>
|
jpayne@1
|
35973 </Hit_hsps>
|
jpayne@1
|
35974 </Hit>
|
jpayne@1
|
35975 </Iteration_hits>
|
jpayne@1
|
35976 <Iteration_stat>
|
jpayne@1
|
35977 <Statistics>
|
jpayne@1
|
35978 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
35979 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
35980 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
35981 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
35982 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
35983 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
35984 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
35985 </Statistics>
|
jpayne@1
|
35986 </Iteration_stat>
|
jpayne@1
|
35987 </Iteration>
|
jpayne@1
|
35988 <Iteration>
|
jpayne@1
|
35989 <Iteration_iter-num>703</Iteration_iter-num>
|
jpayne@1
|
35990 <Iteration_query-ID>Query_703</Iteration_query-ID>
|
jpayne@1
|
35991 <Iteration_query-def>fljB_e,n,x_Rubislawstr_AOYA01000090_e__1496</Iteration_query-def>
|
jpayne@1
|
35992 <Iteration_query-len>1496</Iteration_query-len>
|
jpayne@1
|
35993 <Iteration_hits>
|
jpayne@1
|
35994 <Hit>
|
jpayne@1
|
35995 <Hit_num>1</Hit_num>
|
jpayne@1
|
35996 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
35997 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
35998 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
35999 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36000 <Hit_hsps>
|
jpayne@1
|
36001 <Hsp>
|
jpayne@1
|
36002 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36003 <Hsp_bit-score>438.776</Hsp_bit-score>
|
jpayne@1
|
36004 <Hsp_score>237</Hsp_score>
|
jpayne@1
|
36005 <Hsp_evalue>6.64988e-125</Hsp_evalue>
|
jpayne@1
|
36006 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36007 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36008 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36009 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36010 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36011 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36012 <Hsp_identity>400</Hsp_identity>
|
jpayne@1
|
36013 <Hsp_positive>400</Hsp_positive>
|
jpayne@1
|
36014 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36015 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36016 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCCTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36017 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36018 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || |||||||||||||||||||| |||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||| ||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36019 </Hsp>
|
jpayne@1
|
36020 </Hit_hsps>
|
jpayne@1
|
36021 </Hit>
|
jpayne@1
|
36022 </Iteration_hits>
|
jpayne@1
|
36023 <Iteration_stat>
|
jpayne@1
|
36024 <Statistics>
|
jpayne@1
|
36025 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36026 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36027 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36028 <Statistics_eff-space>80840688</Statistics_eff-space>
|
jpayne@1
|
36029 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36030 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36031 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36032 </Statistics>
|
jpayne@1
|
36033 </Iteration_stat>
|
jpayne@1
|
36034 </Iteration>
|
jpayne@1
|
36035 <Iteration>
|
jpayne@1
|
36036 <Iteration_iter-num>704</Iteration_iter-num>
|
jpayne@1
|
36037 <Iteration_query-ID>Query_704</Iteration_query-ID>
|
jpayne@1
|
36038 <Iteration_query-def>fljB_1,2_Saintpaulstr_AYDS01000021_1__1511</Iteration_query-def>
|
jpayne@1
|
36039 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36040 <Iteration_hits>
|
jpayne@1
|
36041 <Hit>
|
jpayne@1
|
36042 <Hit_num>1</Hit_num>
|
jpayne@1
|
36043 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36044 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36045 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36046 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36047 <Hit_hsps>
|
jpayne@1
|
36048 <Hsp>
|
jpayne@1
|
36049 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36050 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36051 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36052 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36053 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36054 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36055 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36056 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36057 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36058 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36059 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36060 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36061 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36062 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36063 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36064 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36065 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36066 </Hsp>
|
jpayne@1
|
36067 </Hit_hsps>
|
jpayne@1
|
36068 </Hit>
|
jpayne@1
|
36069 </Iteration_hits>
|
jpayne@1
|
36070 <Iteration_stat>
|
jpayne@1
|
36071 <Statistics>
|
jpayne@1
|
36072 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36073 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36074 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36075 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36076 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36077 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36078 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36079 </Statistics>
|
jpayne@1
|
36080 </Iteration_stat>
|
jpayne@1
|
36081 </Iteration>
|
jpayne@1
|
36082 <Iteration>
|
jpayne@1
|
36083 <Iteration_iter-num>705</Iteration_iter-num>
|
jpayne@1
|
36084 <Iteration_query-ID>Query_705</Iteration_query-ID>
|
jpayne@1
|
36085 <Iteration_query-def>fljB_1,2_Saintpaulstr_ABAM02000001_1__1511</Iteration_query-def>
|
jpayne@1
|
36086 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36087 <Iteration_hits>
|
jpayne@1
|
36088 <Hit>
|
jpayne@1
|
36089 <Hit_num>1</Hit_num>
|
jpayne@1
|
36090 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36091 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36092 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36093 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36094 <Hit_hsps>
|
jpayne@1
|
36095 <Hsp>
|
jpayne@1
|
36096 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36097 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36098 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36099 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36100 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36101 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36102 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36103 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36104 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36105 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36106 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36107 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36108 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36109 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36110 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36111 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36112 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36113 </Hsp>
|
jpayne@1
|
36114 </Hit_hsps>
|
jpayne@1
|
36115 </Hit>
|
jpayne@1
|
36116 </Iteration_hits>
|
jpayne@1
|
36117 <Iteration_stat>
|
jpayne@1
|
36118 <Statistics>
|
jpayne@1
|
36119 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36120 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36121 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36122 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36123 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36124 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36125 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36126 </Statistics>
|
jpayne@1
|
36127 </Iteration_stat>
|
jpayne@1
|
36128 </Iteration>
|
jpayne@1
|
36129 <Iteration>
|
jpayne@1
|
36130 <Iteration_iter-num>706</Iteration_iter-num>
|
jpayne@1
|
36131 <Iteration_query-ID>Query_706</Iteration_query-ID>
|
jpayne@1
|
36132 <Iteration_query-def>fljB_1,2_Saintpaulstr_AOXF01000050_1__1511</Iteration_query-def>
|
jpayne@1
|
36133 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36134 <Iteration_hits>
|
jpayne@1
|
36135 <Hit>
|
jpayne@1
|
36136 <Hit_num>1</Hit_num>
|
jpayne@1
|
36137 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36138 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36139 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36140 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36141 <Hit_hsps>
|
jpayne@1
|
36142 <Hsp>
|
jpayne@1
|
36143 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36144 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
36145 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
36146 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
36147 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36148 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36149 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36150 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36151 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36152 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36153 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
36154 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
36155 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36156 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36157 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36158 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36159 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36160 </Hsp>
|
jpayne@1
|
36161 </Hit_hsps>
|
jpayne@1
|
36162 </Hit>
|
jpayne@1
|
36163 </Iteration_hits>
|
jpayne@1
|
36164 <Iteration_stat>
|
jpayne@1
|
36165 <Statistics>
|
jpayne@1
|
36166 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36167 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36168 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36169 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36170 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36171 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36172 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36173 </Statistics>
|
jpayne@1
|
36174 </Iteration_stat>
|
jpayne@1
|
36175 </Iteration>
|
jpayne@1
|
36176 <Iteration>
|
jpayne@1
|
36177 <Iteration_iter-num>707</Iteration_iter-num>
|
jpayne@1
|
36178 <Iteration_query-ID>Query_707</Iteration_query-ID>
|
jpayne@1
|
36179 <Iteration_query-def>fljB_z6_Sloterdijkstr_AOXT01000012_k,z__1493</Iteration_query-def>
|
jpayne@1
|
36180 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
36181 <Iteration_hits>
|
jpayne@1
|
36182 <Hit>
|
jpayne@1
|
36183 <Hit_num>1</Hit_num>
|
jpayne@1
|
36184 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36185 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36186 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36187 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36188 <Hit_hsps>
|
jpayne@1
|
36189 <Hsp>
|
jpayne@1
|
36190 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36191 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
36192 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
36193 <Hsp_evalue>6.5896e-130</Hsp_evalue>
|
jpayne@1
|
36194 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36195 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36196 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36197 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36198 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36199 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36200 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
36201 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
36202 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36203 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36204 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36205 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36206 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36207 </Hsp>
|
jpayne@1
|
36208 </Hit_hsps>
|
jpayne@1
|
36209 </Hit>
|
jpayne@1
|
36210 </Iteration_hits>
|
jpayne@1
|
36211 <Iteration_stat>
|
jpayne@1
|
36212 <Statistics>
|
jpayne@1
|
36213 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36214 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36215 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36216 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
36217 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36218 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36219 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36220 </Statistics>
|
jpayne@1
|
36221 </Iteration_stat>
|
jpayne@1
|
36222 </Iteration>
|
jpayne@1
|
36223 <Iteration>
|
jpayne@1
|
36224 <Iteration_iter-num>708</Iteration_iter-num>
|
jpayne@1
|
36225 <Iteration_query-ID>Query_708</Iteration_query-ID>
|
jpayne@1
|
36226 <Iteration_query-def>fljB_1,2_Stanleystr_ARYV01000056_1__1511</Iteration_query-def>
|
jpayne@1
|
36227 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36228 <Iteration_hits>
|
jpayne@1
|
36229 <Hit>
|
jpayne@1
|
36230 <Hit_num>1</Hit_num>
|
jpayne@1
|
36231 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36232 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36233 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36234 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36235 <Hit_hsps>
|
jpayne@1
|
36236 <Hsp>
|
jpayne@1
|
36237 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36238 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
36239 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
36240 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
36241 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36242 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36243 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36244 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36245 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36246 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36247 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
36248 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
36249 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
36250 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
36251 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36252 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36253 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36254 </Hsp>
|
jpayne@1
|
36255 </Hit_hsps>
|
jpayne@1
|
36256 </Hit>
|
jpayne@1
|
36257 </Iteration_hits>
|
jpayne@1
|
36258 <Iteration_stat>
|
jpayne@1
|
36259 <Statistics>
|
jpayne@1
|
36260 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36261 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36262 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36263 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36264 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36265 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36266 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36267 </Statistics>
|
jpayne@1
|
36268 </Iteration_stat>
|
jpayne@1
|
36269 </Iteration>
|
jpayne@1
|
36270 <Iteration>
|
jpayne@1
|
36271 <Iteration_iter-num>709</Iteration_iter-num>
|
jpayne@1
|
36272 <Iteration_query-ID>Query_709</Iteration_query-ID>
|
jpayne@1
|
36273 <Iteration_query-def>fljB_1,2_Stanleystr_AOXV01000001_1__1511</Iteration_query-def>
|
jpayne@1
|
36274 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36275 <Iteration_hits>
|
jpayne@1
|
36276 <Hit>
|
jpayne@1
|
36277 <Hit_num>1</Hit_num>
|
jpayne@1
|
36278 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36279 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36280 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36281 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36282 <Hit_hsps>
|
jpayne@1
|
36283 <Hsp>
|
jpayne@1
|
36284 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36285 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
36286 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
36287 <Hsp_evalue>3.08138e-133</Hsp_evalue>
|
jpayne@1
|
36288 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36289 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36290 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36291 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36292 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36293 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36294 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
36295 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
36296 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
36297 <Hsp_align-len>480</Hsp_align-len>
|
jpayne@1
|
36298 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTTACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAATTACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36299 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36300 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| || || | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | |||||||||| ||||||| || |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36301 </Hsp>
|
jpayne@1
|
36302 </Hit_hsps>
|
jpayne@1
|
36303 </Hit>
|
jpayne@1
|
36304 </Iteration_hits>
|
jpayne@1
|
36305 <Iteration_stat>
|
jpayne@1
|
36306 <Statistics>
|
jpayne@1
|
36307 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36308 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36309 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36310 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36311 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36312 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36313 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36314 </Statistics>
|
jpayne@1
|
36315 </Iteration_stat>
|
jpayne@1
|
36316 </Iteration>
|
jpayne@1
|
36317 <Iteration>
|
jpayne@1
|
36318 <Iteration_iter-num>710</Iteration_iter-num>
|
jpayne@1
|
36319 <Iteration_query-ID>Query_710</Iteration_query-ID>
|
jpayne@1
|
36320 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AUQT01000077_1__1511</Iteration_query-def>
|
jpayne@1
|
36321 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36322 <Iteration_hits>
|
jpayne@1
|
36323 <Hit>
|
jpayne@1
|
36324 <Hit_num>1</Hit_num>
|
jpayne@1
|
36325 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36326 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36327 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36328 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36329 <Hit_hsps>
|
jpayne@1
|
36330 <Hsp>
|
jpayne@1
|
36331 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36332 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36333 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36334 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36335 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36336 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36337 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36338 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36339 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36340 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36341 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36342 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36343 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36344 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36345 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36346 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36347 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36348 </Hsp>
|
jpayne@1
|
36349 </Hit_hsps>
|
jpayne@1
|
36350 </Hit>
|
jpayne@1
|
36351 </Iteration_hits>
|
jpayne@1
|
36352 <Iteration_stat>
|
jpayne@1
|
36353 <Statistics>
|
jpayne@1
|
36354 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36355 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36356 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36357 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36358 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36359 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36360 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36361 </Statistics>
|
jpayne@1
|
36362 </Iteration_stat>
|
jpayne@1
|
36363 </Iteration>
|
jpayne@1
|
36364 <Iteration>
|
jpayne@1
|
36365 <Iteration_iter-num>711</Iteration_iter-num>
|
jpayne@1
|
36366 <Iteration_query-ID>Query_711</Iteration_query-ID>
|
jpayne@1
|
36367 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AUQU01000007_1__1511</Iteration_query-def>
|
jpayne@1
|
36368 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36369 <Iteration_hits>
|
jpayne@1
|
36370 <Hit>
|
jpayne@1
|
36371 <Hit_num>1</Hit_num>
|
jpayne@1
|
36372 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36373 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36374 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36375 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36376 <Hit_hsps>
|
jpayne@1
|
36377 <Hsp>
|
jpayne@1
|
36378 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36379 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36380 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36381 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36382 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36383 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36384 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36385 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36386 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36387 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36388 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36389 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36390 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36391 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36392 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36393 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36394 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36395 </Hsp>
|
jpayne@1
|
36396 </Hit_hsps>
|
jpayne@1
|
36397 </Hit>
|
jpayne@1
|
36398 </Iteration_hits>
|
jpayne@1
|
36399 <Iteration_stat>
|
jpayne@1
|
36400 <Statistics>
|
jpayne@1
|
36401 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36402 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36403 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36404 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36405 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36406 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36407 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36408 </Statistics>
|
jpayne@1
|
36409 </Iteration_stat>
|
jpayne@1
|
36410 </Iteration>
|
jpayne@1
|
36411 <Iteration>
|
jpayne@1
|
36412 <Iteration_iter-num>712</Iteration_iter-num>
|
jpayne@1
|
36413 <Iteration_query-ID>Query_712</Iteration_query-ID>
|
jpayne@1
|
36414 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AUQV01000001_1__1511</Iteration_query-def>
|
jpayne@1
|
36415 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36416 <Iteration_hits>
|
jpayne@1
|
36417 <Hit>
|
jpayne@1
|
36418 <Hit_num>1</Hit_num>
|
jpayne@1
|
36419 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36420 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36421 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36422 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36423 <Hit_hsps>
|
jpayne@1
|
36424 <Hsp>
|
jpayne@1
|
36425 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36426 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36427 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36428 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36429 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36430 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36431 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36432 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36433 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36434 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36435 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36436 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36437 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36438 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36439 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36440 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36441 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36442 </Hsp>
|
jpayne@1
|
36443 </Hit_hsps>
|
jpayne@1
|
36444 </Hit>
|
jpayne@1
|
36445 </Iteration_hits>
|
jpayne@1
|
36446 <Iteration_stat>
|
jpayne@1
|
36447 <Statistics>
|
jpayne@1
|
36448 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36449 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36450 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36451 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36452 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36453 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36454 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36455 </Statistics>
|
jpayne@1
|
36456 </Iteration_stat>
|
jpayne@1
|
36457 </Iteration>
|
jpayne@1
|
36458 <Iteration>
|
jpayne@1
|
36459 <Iteration_iter-num>713</Iteration_iter-num>
|
jpayne@1
|
36460 <Iteration_query-ID>Query_713</Iteration_query-ID>
|
jpayne@1
|
36461 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AOXC01000008_1__1511</Iteration_query-def>
|
jpayne@1
|
36462 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36463 <Iteration_hits>
|
jpayne@1
|
36464 <Hit>
|
jpayne@1
|
36465 <Hit_num>1</Hit_num>
|
jpayne@1
|
36466 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36467 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36468 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36469 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36470 <Hit_hsps>
|
jpayne@1
|
36471 <Hsp>
|
jpayne@1
|
36472 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36473 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36474 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36475 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36476 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36477 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36478 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36479 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36480 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36481 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36482 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36483 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36484 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36485 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36486 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36487 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36488 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36489 </Hsp>
|
jpayne@1
|
36490 </Hit_hsps>
|
jpayne@1
|
36491 </Hit>
|
jpayne@1
|
36492 </Iteration_hits>
|
jpayne@1
|
36493 <Iteration_stat>
|
jpayne@1
|
36494 <Statistics>
|
jpayne@1
|
36495 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36496 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36497 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36498 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36499 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36500 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36501 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36502 </Statistics>
|
jpayne@1
|
36503 </Iteration_stat>
|
jpayne@1
|
36504 </Iteration>
|
jpayne@1
|
36505 <Iteration>
|
jpayne@1
|
36506 <Iteration_iter-num>714</Iteration_iter-num>
|
jpayne@1
|
36507 <Iteration_query-ID>Query_714</Iteration_query-ID>
|
jpayne@1
|
36508 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AHUV01000080_1__1511</Iteration_query-def>
|
jpayne@1
|
36509 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36510 <Iteration_hits>
|
jpayne@1
|
36511 <Hit>
|
jpayne@1
|
36512 <Hit_num>1</Hit_num>
|
jpayne@1
|
36513 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36514 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36515 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36516 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36517 <Hit_hsps>
|
jpayne@1
|
36518 <Hsp>
|
jpayne@1
|
36519 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36520 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36521 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36522 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36523 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36524 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36525 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36526 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36527 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36528 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36529 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36530 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36531 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36532 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36533 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36534 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36535 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36536 </Hsp>
|
jpayne@1
|
36537 </Hit_hsps>
|
jpayne@1
|
36538 </Hit>
|
jpayne@1
|
36539 </Iteration_hits>
|
jpayne@1
|
36540 <Iteration_stat>
|
jpayne@1
|
36541 <Statistics>
|
jpayne@1
|
36542 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36543 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36544 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36545 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36546 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36547 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36548 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36549 </Statistics>
|
jpayne@1
|
36550 </Iteration_stat>
|
jpayne@1
|
36551 </Iteration>
|
jpayne@1
|
36552 <Iteration>
|
jpayne@1
|
36553 <Iteration_iter-num>715</Iteration_iter-num>
|
jpayne@1
|
36554 <Iteration_query-ID>Query_715</Iteration_query-ID>
|
jpayne@1
|
36555 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AUQM01000018_1__1511</Iteration_query-def>
|
jpayne@1
|
36556 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36557 <Iteration_hits>
|
jpayne@1
|
36558 <Hit>
|
jpayne@1
|
36559 <Hit_num>1</Hit_num>
|
jpayne@1
|
36560 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36561 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36562 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36563 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36564 <Hit_hsps>
|
jpayne@1
|
36565 <Hsp>
|
jpayne@1
|
36566 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36567 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36568 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36569 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36570 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36571 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36572 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36573 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36574 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36575 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36576 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36577 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36578 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36579 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36580 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36581 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36582 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36583 </Hsp>
|
jpayne@1
|
36584 </Hit_hsps>
|
jpayne@1
|
36585 </Hit>
|
jpayne@1
|
36586 </Iteration_hits>
|
jpayne@1
|
36587 <Iteration_stat>
|
jpayne@1
|
36588 <Statistics>
|
jpayne@1
|
36589 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36590 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36591 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36592 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36593 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36594 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36595 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36596 </Statistics>
|
jpayne@1
|
36597 </Iteration_stat>
|
jpayne@1
|
36598 </Iteration>
|
jpayne@1
|
36599 <Iteration>
|
jpayne@1
|
36600 <Iteration_iter-num>716</Iteration_iter-num>
|
jpayne@1
|
36601 <Iteration_query-ID>Query_716</Iteration_query-ID>
|
jpayne@1
|
36602 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AUQO01000019_1__1511</Iteration_query-def>
|
jpayne@1
|
36603 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36604 <Iteration_hits>
|
jpayne@1
|
36605 <Hit>
|
jpayne@1
|
36606 <Hit_num>1</Hit_num>
|
jpayne@1
|
36607 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36608 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36609 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36610 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36611 <Hit_hsps>
|
jpayne@1
|
36612 <Hsp>
|
jpayne@1
|
36613 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36614 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36615 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36616 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36617 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36618 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36619 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36620 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36621 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36622 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36623 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36624 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36625 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36626 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36627 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36628 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36629 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36630 </Hsp>
|
jpayne@1
|
36631 </Hit_hsps>
|
jpayne@1
|
36632 </Hit>
|
jpayne@1
|
36633 </Iteration_hits>
|
jpayne@1
|
36634 <Iteration_stat>
|
jpayne@1
|
36635 <Statistics>
|
jpayne@1
|
36636 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36637 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36638 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36639 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36640 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36641 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36642 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36643 </Statistics>
|
jpayne@1
|
36644 </Iteration_stat>
|
jpayne@1
|
36645 </Iteration>
|
jpayne@1
|
36646 <Iteration>
|
jpayne@1
|
36647 <Iteration_iter-num>717</Iteration_iter-num>
|
jpayne@1
|
36648 <Iteration_query-ID>Query_717</Iteration_query-ID>
|
jpayne@1
|
36649 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AUQN01000019_1__1511</Iteration_query-def>
|
jpayne@1
|
36650 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36651 <Iteration_hits>
|
jpayne@1
|
36652 <Hit>
|
jpayne@1
|
36653 <Hit_num>1</Hit_num>
|
jpayne@1
|
36654 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36655 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36656 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36657 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36658 <Hit_hsps>
|
jpayne@1
|
36659 <Hsp>
|
jpayne@1
|
36660 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36661 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36662 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36663 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36664 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36665 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36666 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36667 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36668 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36669 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36670 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36671 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36672 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36673 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36674 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36675 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36676 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36677 </Hsp>
|
jpayne@1
|
36678 </Hit_hsps>
|
jpayne@1
|
36679 </Hit>
|
jpayne@1
|
36680 </Iteration_hits>
|
jpayne@1
|
36681 <Iteration_stat>
|
jpayne@1
|
36682 <Statistics>
|
jpayne@1
|
36683 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36684 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36685 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36686 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36687 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36688 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36689 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36690 </Statistics>
|
jpayne@1
|
36691 </Iteration_stat>
|
jpayne@1
|
36692 </Iteration>
|
jpayne@1
|
36693 <Iteration>
|
jpayne@1
|
36694 <Iteration_iter-num>718</Iteration_iter-num>
|
jpayne@1
|
36695 <Iteration_query-ID>Query_718</Iteration_query-ID>
|
jpayne@1
|
36696 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AUQL01000023_1__1511</Iteration_query-def>
|
jpayne@1
|
36697 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36698 <Iteration_hits>
|
jpayne@1
|
36699 <Hit>
|
jpayne@1
|
36700 <Hit_num>1</Hit_num>
|
jpayne@1
|
36701 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36702 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36703 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36704 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36705 <Hit_hsps>
|
jpayne@1
|
36706 <Hsp>
|
jpayne@1
|
36707 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36708 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36709 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36710 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36711 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36712 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36713 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36714 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36715 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36716 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36717 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36718 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36719 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36720 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36721 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36722 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36723 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36724 </Hsp>
|
jpayne@1
|
36725 </Hit_hsps>
|
jpayne@1
|
36726 </Hit>
|
jpayne@1
|
36727 </Iteration_hits>
|
jpayne@1
|
36728 <Iteration_stat>
|
jpayne@1
|
36729 <Statistics>
|
jpayne@1
|
36730 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36731 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36732 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36733 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36734 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36735 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36736 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36737 </Statistics>
|
jpayne@1
|
36738 </Iteration_stat>
|
jpayne@1
|
36739 </Iteration>
|
jpayne@1
|
36740 <Iteration>
|
jpayne@1
|
36741 <Iteration_iter-num>719</Iteration_iter-num>
|
jpayne@1
|
36742 <Iteration_query-ID>Query_719</Iteration_query-ID>
|
jpayne@1
|
36743 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AHVA01000007_1__1511</Iteration_query-def>
|
jpayne@1
|
36744 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36745 <Iteration_hits>
|
jpayne@1
|
36746 <Hit>
|
jpayne@1
|
36747 <Hit_num>1</Hit_num>
|
jpayne@1
|
36748 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36749 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36750 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36751 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36752 <Hit_hsps>
|
jpayne@1
|
36753 <Hsp>
|
jpayne@1
|
36754 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36755 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36756 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36757 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36758 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36759 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36760 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36761 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36762 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36763 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36764 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36765 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36766 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36767 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36768 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36769 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36770 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36771 </Hsp>
|
jpayne@1
|
36772 </Hit_hsps>
|
jpayne@1
|
36773 </Hit>
|
jpayne@1
|
36774 </Iteration_hits>
|
jpayne@1
|
36775 <Iteration_stat>
|
jpayne@1
|
36776 <Statistics>
|
jpayne@1
|
36777 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36778 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36779 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36780 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36781 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36782 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36783 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36784 </Statistics>
|
jpayne@1
|
36785 </Iteration_stat>
|
jpayne@1
|
36786 </Iteration>
|
jpayne@1
|
36787 <Iteration>
|
jpayne@1
|
36788 <Iteration_iter-num>720</Iteration_iter-num>
|
jpayne@1
|
36789 <Iteration_query-ID>Query_720</Iteration_query-ID>
|
jpayne@1
|
36790 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AHUZ01000007_1__1511</Iteration_query-def>
|
jpayne@1
|
36791 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36792 <Iteration_hits>
|
jpayne@1
|
36793 <Hit>
|
jpayne@1
|
36794 <Hit_num>1</Hit_num>
|
jpayne@1
|
36795 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36796 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36797 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36798 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36799 <Hit_hsps>
|
jpayne@1
|
36800 <Hsp>
|
jpayne@1
|
36801 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36802 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36803 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36804 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36805 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36806 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36807 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36808 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36809 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36810 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36811 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36812 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36813 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36814 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36815 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36816 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36817 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36818 </Hsp>
|
jpayne@1
|
36819 </Hit_hsps>
|
jpayne@1
|
36820 </Hit>
|
jpayne@1
|
36821 </Iteration_hits>
|
jpayne@1
|
36822 <Iteration_stat>
|
jpayne@1
|
36823 <Statistics>
|
jpayne@1
|
36824 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36825 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36826 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36827 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36828 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36829 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36830 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36831 </Statistics>
|
jpayne@1
|
36832 </Iteration_stat>
|
jpayne@1
|
36833 </Iteration>
|
jpayne@1
|
36834 <Iteration>
|
jpayne@1
|
36835 <Iteration_iter-num>721</Iteration_iter-num>
|
jpayne@1
|
36836 <Iteration_query-ID>Query_721</Iteration_query-ID>
|
jpayne@1
|
36837 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AOXO01000107_1__1511</Iteration_query-def>
|
jpayne@1
|
36838 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36839 <Iteration_hits>
|
jpayne@1
|
36840 <Hit>
|
jpayne@1
|
36841 <Hit_num>1</Hit_num>
|
jpayne@1
|
36842 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36843 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36844 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36845 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36846 <Hit_hsps>
|
jpayne@1
|
36847 <Hsp>
|
jpayne@1
|
36848 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36849 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36850 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36851 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36852 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36853 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36854 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36855 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36856 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36857 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36858 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36859 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36860 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36861 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36862 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36863 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36864 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36865 </Hsp>
|
jpayne@1
|
36866 </Hit_hsps>
|
jpayne@1
|
36867 </Hit>
|
jpayne@1
|
36868 </Iteration_hits>
|
jpayne@1
|
36869 <Iteration_stat>
|
jpayne@1
|
36870 <Statistics>
|
jpayne@1
|
36871 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36872 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36873 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36874 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36875 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36876 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36877 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36878 </Statistics>
|
jpayne@1
|
36879 </Iteration_stat>
|
jpayne@1
|
36880 </Iteration>
|
jpayne@1
|
36881 <Iteration>
|
jpayne@1
|
36882 <Iteration_iter-num>722</Iteration_iter-num>
|
jpayne@1
|
36883 <Iteration_query-ID>Query_722</Iteration_query-ID>
|
jpayne@1
|
36884 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AJTU01000003_1__1511</Iteration_query-def>
|
jpayne@1
|
36885 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36886 <Iteration_hits>
|
jpayne@1
|
36887 <Hit>
|
jpayne@1
|
36888 <Hit_num>1</Hit_num>
|
jpayne@1
|
36889 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36890 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36891 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36892 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36893 <Hit_hsps>
|
jpayne@1
|
36894 <Hsp>
|
jpayne@1
|
36895 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36896 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36897 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36898 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36899 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36900 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36901 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36902 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36903 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36904 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36905 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36906 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36907 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36908 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36909 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36910 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36911 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36912 </Hsp>
|
jpayne@1
|
36913 </Hit_hsps>
|
jpayne@1
|
36914 </Hit>
|
jpayne@1
|
36915 </Iteration_hits>
|
jpayne@1
|
36916 <Iteration_stat>
|
jpayne@1
|
36917 <Statistics>
|
jpayne@1
|
36918 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36919 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36920 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36921 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36922 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36923 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36924 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36925 </Statistics>
|
jpayne@1
|
36926 </Iteration_stat>
|
jpayne@1
|
36927 </Iteration>
|
jpayne@1
|
36928 <Iteration>
|
jpayne@1
|
36929 <Iteration_iter-num>723</Iteration_iter-num>
|
jpayne@1
|
36930 <Iteration_query-ID>Query_723</Iteration_query-ID>
|
jpayne@1
|
36931 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AOXD01000102_1__1511</Iteration_query-def>
|
jpayne@1
|
36932 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36933 <Iteration_hits>
|
jpayne@1
|
36934 <Hit>
|
jpayne@1
|
36935 <Hit_num>1</Hit_num>
|
jpayne@1
|
36936 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36937 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36938 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36939 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36940 <Hit_hsps>
|
jpayne@1
|
36941 <Hsp>
|
jpayne@1
|
36942 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36943 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36944 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36945 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36946 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36947 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36948 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36949 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36950 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36951 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36952 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
36953 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
36954 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
36955 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
36956 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
36957 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
36958 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
36959 </Hsp>
|
jpayne@1
|
36960 </Hit_hsps>
|
jpayne@1
|
36961 </Hit>
|
jpayne@1
|
36962 </Iteration_hits>
|
jpayne@1
|
36963 <Iteration_stat>
|
jpayne@1
|
36964 <Statistics>
|
jpayne@1
|
36965 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
36966 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
36967 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
36968 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
36969 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
36970 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
36971 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
36972 </Statistics>
|
jpayne@1
|
36973 </Iteration_stat>
|
jpayne@1
|
36974 </Iteration>
|
jpayne@1
|
36975 <Iteration>
|
jpayne@1
|
36976 <Iteration_iter-num>724</Iteration_iter-num>
|
jpayne@1
|
36977 <Iteration_query-ID>Query_724</Iteration_query-ID>
|
jpayne@1
|
36978 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AMEE02000100_1__1511</Iteration_query-def>
|
jpayne@1
|
36979 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
36980 <Iteration_hits>
|
jpayne@1
|
36981 <Hit>
|
jpayne@1
|
36982 <Hit_num>1</Hit_num>
|
jpayne@1
|
36983 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
36984 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
36985 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
36986 <Hit_len>1962</Hit_len>
|
jpayne@1
|
36987 <Hit_hsps>
|
jpayne@1
|
36988 <Hsp>
|
jpayne@1
|
36989 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
36990 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
36991 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
36992 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
36993 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
36994 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
36995 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
36996 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
36997 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
36998 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
36999 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
37000 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
37001 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37002 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
37003 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
37004 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
37005 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
37006 </Hsp>
|
jpayne@1
|
37007 </Hit_hsps>
|
jpayne@1
|
37008 </Hit>
|
jpayne@1
|
37009 </Iteration_hits>
|
jpayne@1
|
37010 <Iteration_stat>
|
jpayne@1
|
37011 <Statistics>
|
jpayne@1
|
37012 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37013 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37014 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37015 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
37016 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37017 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37018 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37019 </Statistics>
|
jpayne@1
|
37020 </Iteration_stat>
|
jpayne@1
|
37021 </Iteration>
|
jpayne@1
|
37022 <Iteration>
|
jpayne@1
|
37023 <Iteration_iter-num>725</Iteration_iter-num>
|
jpayne@1
|
37024 <Iteration_query-ID>Query_725</Iteration_query-ID>
|
jpayne@1
|
37025 <Iteration_query-def>fljB_1,2_Typhimuriumstr_ATWR01000017_1__1511</Iteration_query-def>
|
jpayne@1
|
37026 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
37027 <Iteration_hits>
|
jpayne@1
|
37028 <Hit>
|
jpayne@1
|
37029 <Hit_num>1</Hit_num>
|
jpayne@1
|
37030 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37031 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37032 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37033 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37034 <Hit_hsps>
|
jpayne@1
|
37035 <Hsp>
|
jpayne@1
|
37036 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37037 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
37038 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
37039 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
37040 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37041 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
37042 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
37043 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
37044 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37045 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37046 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
37047 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
37048 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37049 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
37050 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
37051 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
37052 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
37053 </Hsp>
|
jpayne@1
|
37054 </Hit_hsps>
|
jpayne@1
|
37055 </Hit>
|
jpayne@1
|
37056 </Iteration_hits>
|
jpayne@1
|
37057 <Iteration_stat>
|
jpayne@1
|
37058 <Statistics>
|
jpayne@1
|
37059 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37060 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37061 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37062 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
37063 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37064 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37065 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37066 </Statistics>
|
jpayne@1
|
37067 </Iteration_stat>
|
jpayne@1
|
37068 </Iteration>
|
jpayne@1
|
37069 <Iteration>
|
jpayne@1
|
37070 <Iteration_iter-num>726</Iteration_iter-num>
|
jpayne@1
|
37071 <Iteration_query-ID>Query_726</Iteration_query-ID>
|
jpayne@1
|
37072 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AMDZ02000041_1__1511</Iteration_query-def>
|
jpayne@1
|
37073 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
37074 <Iteration_hits>
|
jpayne@1
|
37075 <Hit>
|
jpayne@1
|
37076 <Hit_num>1</Hit_num>
|
jpayne@1
|
37077 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37078 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37079 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37080 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37081 <Hit_hsps>
|
jpayne@1
|
37082 <Hsp>
|
jpayne@1
|
37083 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37084 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
37085 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
37086 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
37087 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37088 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
37089 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
37090 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
37091 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37092 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37093 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
37094 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
37095 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37096 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
37097 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
37098 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
37099 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
37100 </Hsp>
|
jpayne@1
|
37101 </Hit_hsps>
|
jpayne@1
|
37102 </Hit>
|
jpayne@1
|
37103 </Iteration_hits>
|
jpayne@1
|
37104 <Iteration_stat>
|
jpayne@1
|
37105 <Statistics>
|
jpayne@1
|
37106 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37107 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37108 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37109 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
37110 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37111 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37112 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37113 </Statistics>
|
jpayne@1
|
37114 </Iteration_stat>
|
jpayne@1
|
37115 </Iteration>
|
jpayne@1
|
37116 <Iteration>
|
jpayne@1
|
37117 <Iteration_iter-num>727</Iteration_iter-num>
|
jpayne@1
|
37118 <Iteration_query-ID>Query_727</Iteration_query-ID>
|
jpayne@1
|
37119 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AMEA02000051_1__1511</Iteration_query-def>
|
jpayne@1
|
37120 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
37121 <Iteration_hits>
|
jpayne@1
|
37122 <Hit>
|
jpayne@1
|
37123 <Hit_num>1</Hit_num>
|
jpayne@1
|
37124 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37125 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37126 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37127 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37128 <Hit_hsps>
|
jpayne@1
|
37129 <Hsp>
|
jpayne@1
|
37130 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37131 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
37132 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
37133 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
37134 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37135 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
37136 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
37137 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
37138 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37139 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37140 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
37141 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
37142 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37143 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
37144 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
37145 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
37146 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
37147 </Hsp>
|
jpayne@1
|
37148 </Hit_hsps>
|
jpayne@1
|
37149 </Hit>
|
jpayne@1
|
37150 </Iteration_hits>
|
jpayne@1
|
37151 <Iteration_stat>
|
jpayne@1
|
37152 <Statistics>
|
jpayne@1
|
37153 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37154 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37155 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37156 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
37157 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37158 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37159 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37160 </Statistics>
|
jpayne@1
|
37161 </Iteration_stat>
|
jpayne@1
|
37162 </Iteration>
|
jpayne@1
|
37163 <Iteration>
|
jpayne@1
|
37164 <Iteration_iter-num>728</Iteration_iter-num>
|
jpayne@1
|
37165 <Iteration_query-ID>Query_728</Iteration_query-ID>
|
jpayne@1
|
37166 <Iteration_query-def>fljB_1,2_Typhimuriumstr_AERV01000016_1__1511</Iteration_query-def>
|
jpayne@1
|
37167 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
37168 <Iteration_hits>
|
jpayne@1
|
37169 <Hit>
|
jpayne@1
|
37170 <Hit_num>1</Hit_num>
|
jpayne@1
|
37171 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37172 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37173 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37174 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37175 <Hit_hsps>
|
jpayne@1
|
37176 <Hsp>
|
jpayne@1
|
37177 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37178 <Hsp_bit-score>449.856</Hsp_bit-score>
|
jpayne@1
|
37179 <Hsp_score>243</Hsp_score>
|
jpayne@1
|
37180 <Hsp_evalue>3.10326e-128</Hsp_evalue>
|
jpayne@1
|
37181 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37182 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
37183 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
37184 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
37185 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37186 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37187 <Hsp_identity>402</Hsp_identity>
|
jpayne@1
|
37188 <Hsp_positive>402</Hsp_positive>
|
jpayne@1
|
37189 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37190 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
37191 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
37192 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
37193 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
37194 </Hsp>
|
jpayne@1
|
37195 </Hit_hsps>
|
jpayne@1
|
37196 </Hit>
|
jpayne@1
|
37197 </Iteration_hits>
|
jpayne@1
|
37198 <Iteration_stat>
|
jpayne@1
|
37199 <Statistics>
|
jpayne@1
|
37200 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37201 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37202 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37203 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
37204 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37205 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37206 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37207 </Statistics>
|
jpayne@1
|
37208 </Iteration_stat>
|
jpayne@1
|
37209 </Iteration>
|
jpayne@1
|
37210 <Iteration>
|
jpayne@1
|
37211 <Iteration_iter-num>729</Iteration_iter-num>
|
jpayne@1
|
37212 <Iteration_query-ID>Query_729</Iteration_query-ID>
|
jpayne@1
|
37213 <Iteration_query-def>fljB_z6_Weltevredenstr_ABFF01000037_k,z__1493</Iteration_query-def>
|
jpayne@1
|
37214 <Iteration_query-len>1493</Iteration_query-len>
|
jpayne@1
|
37215 <Iteration_hits>
|
jpayne@1
|
37216 <Hit>
|
jpayne@1
|
37217 <Hit_num>1</Hit_num>
|
jpayne@1
|
37218 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37219 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37220 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37221 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37222 <Hit_hsps>
|
jpayne@1
|
37223 <Hsp>
|
jpayne@1
|
37224 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37225 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
37226 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
37227 <Hsp_evalue>6.5896e-130</Hsp_evalue>
|
jpayne@1
|
37228 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37229 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
37230 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
37231 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
37232 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37233 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37234 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
37235 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
37236 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37237 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
37238 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTTACCGCGAACATTAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGATCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
37239 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
37240 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| || || | || || |||||||||||||||||||||||||||||||||||||| || ||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || ||||| | || ||||||| |||||| || | | |||||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
37241 </Hsp>
|
jpayne@1
|
37242 </Hit_hsps>
|
jpayne@1
|
37243 </Hit>
|
jpayne@1
|
37244 </Iteration_hits>
|
jpayne@1
|
37245 <Iteration_stat>
|
jpayne@1
|
37246 <Statistics>
|
jpayne@1
|
37247 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37248 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37249 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37250 <Statistics_eff-space>80676600</Statistics_eff-space>
|
jpayne@1
|
37251 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37252 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37253 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37254 </Statistics>
|
jpayne@1
|
37255 </Iteration_stat>
|
jpayne@1
|
37256 </Iteration>
|
jpayne@1
|
37257 <Iteration>
|
jpayne@1
|
37258 <Iteration_iter-num>730</Iteration_iter-num>
|
jpayne@1
|
37259 <Iteration_query-ID>Query_730</Iteration_query-ID>
|
jpayne@1
|
37260 <Iteration_query-def>fljB_z53_IIIb.60:(k):z53_HM142067_other.z53__1497</Iteration_query-def>
|
jpayne@1
|
37261 <Iteration_query-len>1497</Iteration_query-len>
|
jpayne@1
|
37262 <Iteration_hits>
|
jpayne@1
|
37263 <Hit>
|
jpayne@1
|
37264 <Hit_num>1</Hit_num>
|
jpayne@1
|
37265 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37266 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37267 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37268 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37269 <Hit_hsps>
|
jpayne@1
|
37270 <Hsp>
|
jpayne@1
|
37271 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37272 <Hsp_bit-score>466.476</Hsp_bit-score>
|
jpayne@1
|
37273 <Hsp_score>252</Hsp_score>
|
jpayne@1
|
37274 <Hsp_evalue>3.05248e-133</Hsp_evalue>
|
jpayne@1
|
37275 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37276 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
37277 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
37278 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
37279 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37280 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37281 <Hsp_identity>405</Hsp_identity>
|
jpayne@1
|
37282 <Hsp_positive>405</Hsp_positive>
|
jpayne@1
|
37283 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37284 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
37285 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACTGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTTTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTTCTGGCGCAGGATAACACCCTGACCATCCAGGTTGGTGCCAATGACGGTGAAACCATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
37286 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
37287 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||| | || |||||||| |||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | |||||||||| |||||| || | | ||| || | |||||||| || || || ||||||||| || ||||| || ||||| ||| | ||||| ||| ||| |||||||||||||| || || ||||||||||| |||||||||</Hsp_midline>
|
jpayne@1
|
37288 </Hsp>
|
jpayne@1
|
37289 </Hit_hsps>
|
jpayne@1
|
37290 </Hit>
|
jpayne@1
|
37291 </Iteration_hits>
|
jpayne@1
|
37292 <Iteration_stat>
|
jpayne@1
|
37293 <Statistics>
|
jpayne@1
|
37294 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37295 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37296 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37297 <Statistics_eff-space>80895384</Statistics_eff-space>
|
jpayne@1
|
37298 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37299 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37300 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37301 </Statistics>
|
jpayne@1
|
37302 </Iteration_stat>
|
jpayne@1
|
37303 </Iteration>
|
jpayne@1
|
37304 <Iteration>
|
jpayne@1
|
37305 <Iteration_iter-num>731</Iteration_iter-num>
|
jpayne@1
|
37306 <Iteration_query-ID>Query_731</Iteration_query-ID>
|
jpayne@1
|
37307 <Iteration_query-def>oafA__1830</Iteration_query-def>
|
jpayne@1
|
37308 <Iteration_query-len>1830</Iteration_query-len>
|
jpayne@1
|
37309 <Iteration_hits>
|
jpayne@1
|
37310 </Iteration_hits>
|
jpayne@1
|
37311 <Iteration_stat>
|
jpayne@1
|
37312 <Statistics>
|
jpayne@1
|
37313 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37314 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37315 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37316 <Statistics_eff-space>99109152</Statistics_eff-space>
|
jpayne@1
|
37317 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37318 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37319 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37320 </Statistics>
|
jpayne@1
|
37321 </Iteration_stat>
|
jpayne@1
|
37322 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
37323 </Iteration>
|
jpayne@1
|
37324 <Iteration>
|
jpayne@1
|
37325 <Iteration_iter-num>732</Iteration_iter-num>
|
jpayne@1
|
37326 <Iteration_query-ID>Query_732</Iteration_query-ID>
|
jpayne@1
|
37327 <Iteration_query-def>oafA-O-4_full__332</Iteration_query-def>
|
jpayne@1
|
37328 <Iteration_query-len>332</Iteration_query-len>
|
jpayne@1
|
37329 <Iteration_hits>
|
jpayne@1
|
37330 </Iteration_hits>
|
jpayne@1
|
37331 <Iteration_stat>
|
jpayne@1
|
37332 <Statistics>
|
jpayne@1
|
37333 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37334 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37335 <Statistics_hsp-len>16</Statistics_hsp-len>
|
jpayne@1
|
37336 <Statistics_eff-space>17355352</Statistics_eff-space>
|
jpayne@1
|
37337 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37338 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37339 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37340 </Statistics>
|
jpayne@1
|
37341 </Iteration_stat>
|
jpayne@1
|
37342 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
37343 </Iteration>
|
jpayne@1
|
37344 <Iteration>
|
jpayne@1
|
37345 <Iteration_iter-num>733</Iteration_iter-num>
|
jpayne@1
|
37346 <Iteration_query-ID>Query_733</Iteration_query-ID>
|
jpayne@1
|
37347 <Iteration_query-def>oafA-O-4_5-__325</Iteration_query-def>
|
jpayne@1
|
37348 <Iteration_query-len>325</Iteration_query-len>
|
jpayne@1
|
37349 <Iteration_hits>
|
jpayne@1
|
37350 </Iteration_hits>
|
jpayne@1
|
37351 <Iteration_stat>
|
jpayne@1
|
37352 <Statistics>
|
jpayne@1
|
37353 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37354 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37355 <Statistics_hsp-len>16</Statistics_hsp-len>
|
jpayne@1
|
37356 <Statistics_eff-space>16970898</Statistics_eff-space>
|
jpayne@1
|
37357 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37358 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37359 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37360 </Statistics>
|
jpayne@1
|
37361 </Iteration_stat>
|
jpayne@1
|
37362 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
37363 </Iteration>
|
jpayne@1
|
37364 <Iteration>
|
jpayne@1
|
37365 <Iteration_iter-num>734</Iteration_iter-num>
|
jpayne@1
|
37366 <Iteration_query-ID>Query_734</Iteration_query-ID>
|
jpayne@1
|
37367 <Iteration_query-def>sdf_I_AF370707__333</Iteration_query-def>
|
jpayne@1
|
37368 <Iteration_query-len>333</Iteration_query-len>
|
jpayne@1
|
37369 <Iteration_hits>
|
jpayne@1
|
37370 </Iteration_hits>
|
jpayne@1
|
37371 <Iteration_stat>
|
jpayne@1
|
37372 <Statistics>
|
jpayne@1
|
37373 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37374 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37375 <Statistics_hsp-len>16</Statistics_hsp-len>
|
jpayne@1
|
37376 <Statistics_eff-space>17410274</Statistics_eff-space>
|
jpayne@1
|
37377 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37378 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37379 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37380 </Statistics>
|
jpayne@1
|
37381 </Iteration_stat>
|
jpayne@1
|
37382 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
37383 </Iteration>
|
jpayne@1
|
37384 <Iteration>
|
jpayne@1
|
37385 <Iteration_iter-num>735</Iteration_iter-num>
|
jpayne@1
|
37386 <Iteration_query-ID>Query_735</Iteration_query-ID>
|
jpayne@1
|
37387 <Iteration_query-def>tyr-O-2__608</Iteration_query-def>
|
jpayne@1
|
37388 <Iteration_query-len>31</Iteration_query-len>
|
jpayne@1
|
37389 <Iteration_hits>
|
jpayne@1
|
37390 </Iteration_hits>
|
jpayne@1
|
37391 <Iteration_stat>
|
jpayne@1
|
37392 <Statistics>
|
jpayne@1
|
37393 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37394 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37395 <Statistics_hsp-len>13</Statistics_hsp-len>
|
jpayne@1
|
37396 <Statistics_eff-space>994698</Statistics_eff-space>
|
jpayne@1
|
37397 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37398 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37399 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37400 </Statistics>
|
jpayne@1
|
37401 </Iteration_stat>
|
jpayne@1
|
37402 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
37403 </Iteration>
|
jpayne@1
|
37404 <Iteration>
|
jpayne@1
|
37405 <Iteration_iter-num>736</Iteration_iter-num>
|
jpayne@1
|
37406 <Iteration_query-ID>Query_736</Iteration_query-ID>
|
jpayne@1
|
37407 <Iteration_query-def>tyr-O-9__609</Iteration_query-def>
|
jpayne@1
|
37408 <Iteration_query-len>32</Iteration_query-len>
|
jpayne@1
|
37409 <Iteration_hits>
|
jpayne@1
|
37410 </Iteration_hits>
|
jpayne@1
|
37411 <Iteration_stat>
|
jpayne@1
|
37412 <Statistics>
|
jpayne@1
|
37413 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37414 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37415 <Statistics_hsp-len>13</Statistics_hsp-len>
|
jpayne@1
|
37416 <Statistics_eff-space>1049959</Statistics_eff-space>
|
jpayne@1
|
37417 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37418 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37419 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37420 </Statistics>
|
jpayne@1
|
37421 </Iteration_stat>
|
jpayne@1
|
37422 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
37423 </Iteration>
|
jpayne@1
|
37424 <Iteration>
|
jpayne@1
|
37425 <Iteration_iter-num>737</Iteration_iter-num>
|
jpayne@1
|
37426 <Iteration_query-ID>Query_737</Iteration_query-ID>
|
jpayne@1
|
37427 <Iteration_query-def>gntR-family-regulatory-protein_dt-negative__291</Iteration_query-def>
|
jpayne@1
|
37428 <Iteration_query-len>291</Iteration_query-len>
|
jpayne@1
|
37429 <Iteration_hits>
|
jpayne@1
|
37430 <Hit>
|
jpayne@1
|
37431 <Hit_num>1</Hit_num>
|
jpayne@1
|
37432 <Hit_id>gnl|BL_ORD_ID|5</Hit_id>
|
jpayne@1
|
37433 <Hit_def>NODE_6_length_742_cov_58.139837</Hit_def>
|
jpayne@1
|
37434 <Hit_accession>5</Hit_accession>
|
jpayne@1
|
37435 <Hit_len>742</Hit_len>
|
jpayne@1
|
37436 <Hit_hsps>
|
jpayne@1
|
37437 <Hsp>
|
jpayne@1
|
37438 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37439 <Hsp_bit-score>499.716</Hsp_bit-score>
|
jpayne@1
|
37440 <Hsp_score>270</Hsp_score>
|
jpayne@1
|
37441 <Hsp_evalue>5.61906e-144</Hsp_evalue>
|
jpayne@1
|
37442 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37443 <Hsp_query-to>291</Hsp_query-to>
|
jpayne@1
|
37444 <Hsp_hit-from>511</Hsp_hit-from>
|
jpayne@1
|
37445 <Hsp_hit-to>221</Hsp_hit-to>
|
jpayne@1
|
37446 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37447 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37448 <Hsp_identity>284</Hsp_identity>
|
jpayne@1
|
37449 <Hsp_positive>284</Hsp_positive>
|
jpayne@1
|
37450 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
37451 <Hsp_align-len>291</Hsp_align-len>
|
jpayne@1
|
37452 <Hsp_qseq>AATATGCTGACCCGCTATGTTGGTGACCCTTCTGCCTGATCTTTTCGCCTGCGTGAGCATCGCAGGCGCTTCAACCAATTCTTCAATTCTATTAATCACGTCCAGTAACGATCTAACCACGATCTTGATGTAGATCCCACTCCTGCATCTTTCCTGAGAAACGATTTGACTTAGTTTTTGTATGGGAATAATTTCTCCCTGTCAACATTGGATACAATATCATATATCATTGATTGGATAATTATAAATATAGAACCCATTACCCTTACCTTATGTTTATTGGTGTTCGCT</Hsp_qseq>
|
jpayne@1
|
37453 <Hsp_hseq>AATATGCTGACCCGCTATGTTGGTGACCCTTCTGCCTGATCTTTTCGCCTGCGTGAGCATCGCAGGCGCTTCAACCAATTCTTCAATTCTATTAATCACGTCCAGTAACGATCCAACTACGATCTTGATGTAGATCCCACTCCTGCATTTTTCCTGAGAAACGATTTGACTTAGTTTTTGTATGGGAATAATTTCTCCTCGTCAGCATTGGATACAATATCATATATCATTGATTGGATAATTATAAATATGGAACCCATTACCCTTACCTTATGTTTATTGGTGTTCGCT</Hsp_hseq>
|
jpayne@1
|
37454 <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
37455 </Hsp>
|
jpayne@1
|
37456 </Hit_hsps>
|
jpayne@1
|
37457 </Hit>
|
jpayne@1
|
37458 </Iteration_hits>
|
jpayne@1
|
37459 <Iteration_stat>
|
jpayne@1
|
37460 <Statistics>
|
jpayne@1
|
37461 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37462 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37463 <Statistics_hsp-len>16</Statistics_hsp-len>
|
jpayne@1
|
37464 <Statistics_eff-space>15103550</Statistics_eff-space>
|
jpayne@1
|
37465 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37466 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37467 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37468 </Statistics>
|
jpayne@1
|
37469 </Iteration_stat>
|
jpayne@1
|
37470 </Iteration>
|
jpayne@1
|
37471 <Iteration>
|
jpayne@1
|
37472 <Iteration_iter-num>738</Iteration_iter-num>
|
jpayne@1
|
37473 <Iteration_query-ID>Query_738</Iteration_query-ID>
|
jpayne@1
|
37474 <Iteration_query-def>gntR-family-regulatory-protein_dt-positive__291</Iteration_query-def>
|
jpayne@1
|
37475 <Iteration_query-len>291</Iteration_query-len>
|
jpayne@1
|
37476 <Iteration_hits>
|
jpayne@1
|
37477 <Hit>
|
jpayne@1
|
37478 <Hit_num>1</Hit_num>
|
jpayne@1
|
37479 <Hit_id>gnl|BL_ORD_ID|5</Hit_id>
|
jpayne@1
|
37480 <Hit_def>NODE_6_length_742_cov_58.139837</Hit_def>
|
jpayne@1
|
37481 <Hit_accession>5</Hit_accession>
|
jpayne@1
|
37482 <Hit_len>742</Hit_len>
|
jpayne@1
|
37483 <Hit_hsps>
|
jpayne@1
|
37484 <Hsp>
|
jpayne@1
|
37485 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37486 <Hsp_bit-score>505.256</Hsp_bit-score>
|
jpayne@1
|
37487 <Hsp_score>273</Hsp_score>
|
jpayne@1
|
37488 <Hsp_evalue>1.20774e-145</Hsp_evalue>
|
jpayne@1
|
37489 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37490 <Hsp_query-to>291</Hsp_query-to>
|
jpayne@1
|
37491 <Hsp_hit-from>511</Hsp_hit-from>
|
jpayne@1
|
37492 <Hsp_hit-to>221</Hsp_hit-to>
|
jpayne@1
|
37493 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37494 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37495 <Hsp_identity>285</Hsp_identity>
|
jpayne@1
|
37496 <Hsp_positive>285</Hsp_positive>
|
jpayne@1
|
37497 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
37498 <Hsp_align-len>291</Hsp_align-len>
|
jpayne@1
|
37499 <Hsp_qseq>AATATGCTGACCCGCTATGTTGGTGACCCTTCTGCCTGATCTTTTCGCCTGCGTGAGCATCGCAGGCGCTTCAACCAATTCTTCAATTCTATTAATCACGTCCAGTAACGATCTAACCACGATCTTGATGTAGATCCCACTCCTGCATCTTTCCTGAGAAACGATTTGACTTAGTTTTTGTATGGGAATAATTTCTCCCTGTCAACATTGGATACAATATCATATATCATTGATTGGATAATTATAAATATGGAACCCATTACCCTTACCTTATGTTTATTGGTGTTCGCT</Hsp_qseq>
|
jpayne@1
|
37500 <Hsp_hseq>AATATGCTGACCCGCTATGTTGGTGACCCTTCTGCCTGATCTTTTCGCCTGCGTGAGCATCGCAGGCGCTTCAACCAATTCTTCAATTCTATTAATCACGTCCAGTAACGATCCAACTACGATCTTGATGTAGATCCCACTCCTGCATTTTTCCTGAGAAACGATTTGACTTAGTTTTTGTATGGGAATAATTTCTCCTCGTCAGCATTGGATACAATATCATATATCATTGATTGGATAATTATAAATATGGAACCCATTACCCTTACCTTATGTTTATTGGTGTTCGCT</Hsp_hseq>
|
jpayne@1
|
37501 <Hsp_midline>||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||| |||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
37502 </Hsp>
|
jpayne@1
|
37503 </Hit_hsps>
|
jpayne@1
|
37504 </Hit>
|
jpayne@1
|
37505 </Iteration_hits>
|
jpayne@1
|
37506 <Iteration_stat>
|
jpayne@1
|
37507 <Statistics>
|
jpayne@1
|
37508 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37509 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37510 <Statistics_hsp-len>16</Statistics_hsp-len>
|
jpayne@1
|
37511 <Statistics_eff-space>15103550</Statistics_eff-space>
|
jpayne@1
|
37512 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37513 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37514 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37515 </Statistics>
|
jpayne@1
|
37516 </Iteration_stat>
|
jpayne@1
|
37517 </Iteration>
|
jpayne@1
|
37518 <Iteration>
|
jpayne@1
|
37519 <Iteration_iter-num>739</Iteration_iter-num>
|
jpayne@1
|
37520 <Iteration_query-ID>Query_739</Iteration_query-ID>
|
jpayne@1
|
37521 <Iteration_query-def>O:23-gene1__1029</Iteration_query-def>
|
jpayne@1
|
37522 <Iteration_query-len>1029</Iteration_query-len>
|
jpayne@1
|
37523 <Iteration_hits>
|
jpayne@1
|
37524 <Hit>
|
jpayne@1
|
37525 <Hit_num>1</Hit_num>
|
jpayne@1
|
37526 <Hit_id>gnl|BL_ORD_ID|0</Hit_id>
|
jpayne@1
|
37527 <Hit_def>NODE_1_length_2768_cov_35.602423</Hit_def>
|
jpayne@1
|
37528 <Hit_accession>0</Hit_accession>
|
jpayne@1
|
37529 <Hit_len>2768</Hit_len>
|
jpayne@1
|
37530 <Hit_hsps>
|
jpayne@1
|
37531 <Hsp>
|
jpayne@1
|
37532 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37533 <Hsp_bit-score>1868.08</Hsp_bit-score>
|
jpayne@1
|
37534 <Hsp_score>1011</Hsp_score>
|
jpayne@1
|
37535 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
37536 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37537 <Hsp_query-to>1029</Hsp_query-to>
|
jpayne@1
|
37538 <Hsp_hit-from>410</Hsp_hit-from>
|
jpayne@1
|
37539 <Hsp_hit-to>1438</Hsp_hit-to>
|
jpayne@1
|
37540 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37541 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
37542 <Hsp_identity>1023</Hsp_identity>
|
jpayne@1
|
37543 <Hsp_positive>1023</Hsp_positive>
|
jpayne@1
|
37544 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
37545 <Hsp_align-len>1029</Hsp_align-len>
|
jpayne@1
|
37546 <Hsp_qseq>AAGGTGCGGATGATGATATTAGTCACTGGTGGAGCTGGTTATATAGGATCGCATACTTGTTTAGCGCTTATTGCCAAAGGGCACGACATTATTGTTATTGATAATTTAAGTAATTCCTCTTATGAGTCGATTAGGCGTGTTGAGAATTTAACCAATAAAAAAATAAAATTTATAAAAAGTGATATAAAAGAACGACATTGCCTGGATGAAGTGTTTAATAATTATTCGATAGAAGCAGTAATACATTTTGCAGCATTAAAATCAGTAAGTGAGTCTGTTGAAAAACCATTGGTTTATTATGATAATAATATCACAGGTACCTTGACTCTACTGGCTGCAATGCAAAGTGCAAATGTAAATAATTTGATTTTTAGTTCGTCTGCTACCGTATATGGTTGTTCTTCGATTGTTCCAAATAAAGAGAACGATACAATTGGGGGGACTACAAATCCCTATGGAACATCAAAATATTTTAGTGAGATTATTCTGCAGGATTTTTGTAAGTCTAATGAGTTATTTTCCGCAGTAAGTCTTCGTTATTTTAATCCTACTGGTGCTCATAAATCAGGTATGATTGGGGAAGATCCTAATGGAATACCAAATAACCTCATTCCATATATATCACAAGTTGCCACTGGAAAACTTAAATATTTAAATGTATATGGTGGTGATTATGACACAATTGATGGCACTGGCATGCGAGATTATATACATGTAGATGATTTAGCTGAAGGACATGTCAAGACATTAGAATACATGTTATCAACAAAAGTAGGTTATGATGTTTTTAATTTGGGGTCAGGTCGAGCATATAGTGTTTTGCAAATCATTAAAGCTTTTGAGCTCGTCACTAAAAAAGAGATTCCCTATAATATTGTCGCACGAAGAAATGGTGATTTAGACAAATCTTGGGCTGATACTGAAAAAGCCAGAAACCTCCTGGGGTGGGAGGCAAAATATGGAATAGAGGATATGTTGCAAGATGTTTGGAACTGGCAATCACACAATCCAAATGGTTATAGAGTTTAA</Hsp_qseq>
|
jpayne@1
|
37547 <Hsp_hseq>AAGGTGCGGATGATGATATTAGTCACTGGTGGAGCTGGTTATATAGGATCGCATACTTGTTTAGCGCTTATTACCAAAGGGTACGACATTATTGTTATTGATAATTTAAGTAATTCCTCTTATGAGTCGATTAGGCGCGTTGAGAATTTAACCAATAAAAAAATAAAATTTATAAAAAGTGATATAAAAGAACGACATTGCCTGGATGAAGTGTTTAATAATTATTCGATAGAAGCAGTAATACATTTTGCAGCATTAAAATCAGTAAGTGAGTCTGTTGAAAAACCATTGGTTTATTATGATAATAATATCACAGGTACCTTGACTCTACTGGCTGCAATGCAAAGTGCAAATGTAAATAATTTGATTTTTAGTTCGTCTGCTACCGTATATGGTTGTTCTTCGATTGTTCCAAATAAAGAGAACGATACAATTGGGGGGACTACAAATCCCTATGGAACATCAAAATATTTTAGTGAGATTATTCTGCAGGATTTTTGTAAGTCTAATGAGTTATTTTCCGCAGTAAGTCTTCGTTATTTTAATCCTACTGGTGCTCATAAATCAGGTATGATTGGGGAAGATCCTAATGGAATACCAAATAACCTCATTCCATATATATCACAAGTTGCCACTGGAAAACTTAAATATTTAAATGTATATGGTGGTGATTATGACACAATTGATGGCACTGGCATGCGAGATTATATTCATGTAGATGATTTAGCTGAAGGACATGTCAAGACATTAGAATACATGTTATCAACAAAAGTAGGTTATGATGTTTTTAATTTGGGGTCAGGTCGAGCATATAGTGTTTTGCAAATCATTAAAGCTTTTGAGCGCGTCACTAAAAAAGAGATTCCCTATAATATTGTCGCGCGAAGAAATGGTGATTTAGACAAATCTTGGGCTGATACTGAAAAAGCCAGAAACCTCCTGGGGTGGGAGGCAAAATATGGAATAGAGGATATGTTGCAAGATGTTTGGAACTGGCAATCACACAATCCAAATGGTTATAGAGTTTAA</Hsp_hseq>
|
jpayne@1
|
37548 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
37549 </Hsp>
|
jpayne@1
|
37550 </Hit_hsps>
|
jpayne@1
|
37551 </Hit>
|
jpayne@1
|
37552 </Iteration_hits>
|
jpayne@1
|
37553 <Iteration_stat>
|
jpayne@1
|
37554 <Statistics>
|
jpayne@1
|
37555 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37556 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37557 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
37558 <Statistics_eff-space>55466708</Statistics_eff-space>
|
jpayne@1
|
37559 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37560 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37561 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37562 </Statistics>
|
jpayne@1
|
37563 </Iteration_stat>
|
jpayne@1
|
37564 </Iteration>
|
jpayne@1
|
37565 <Iteration>
|
jpayne@1
|
37566 <Iteration_iter-num>740</Iteration_iter-num>
|
jpayne@1
|
37567 <Iteration_query-ID>Query_740</Iteration_query-ID>
|
jpayne@1
|
37568 <Iteration_query-def>O:22-gene1__1071</Iteration_query-def>
|
jpayne@1
|
37569 <Iteration_query-len>1071</Iteration_query-len>
|
jpayne@1
|
37570 <Iteration_hits>
|
jpayne@1
|
37571 </Iteration_hits>
|
jpayne@1
|
37572 <Iteration_stat>
|
jpayne@1
|
37573 <Statistics>
|
jpayne@1
|
37574 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37575 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37576 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37577 <Statistics_eff-space>57594888</Statistics_eff-space>
|
jpayne@1
|
37578 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37579 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37580 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37581 </Statistics>
|
jpayne@1
|
37582 </Iteration_stat>
|
jpayne@1
|
37583 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
37584 </Iteration>
|
jpayne@1
|
37585 <Iteration>
|
jpayne@1
|
37586 <Iteration_iter-num>741</Iteration_iter-num>
|
jpayne@1
|
37587 <Iteration_query-ID>Query_741</Iteration_query-ID>
|
jpayne@1
|
37588 <Iteration_query-def>O:23-gene2__1146</Iteration_query-def>
|
jpayne@1
|
37589 <Iteration_query-len>1146</Iteration_query-len>
|
jpayne@1
|
37590 <Iteration_hits>
|
jpayne@1
|
37591 <Hit>
|
jpayne@1
|
37592 <Hit_num>1</Hit_num>
|
jpayne@1
|
37593 <Hit_id>gnl|BL_ORD_ID|0</Hit_id>
|
jpayne@1
|
37594 <Hit_def>NODE_1_length_2768_cov_35.602423</Hit_def>
|
jpayne@1
|
37595 <Hit_accession>0</Hit_accession>
|
jpayne@1
|
37596 <Hit_len>2768</Hit_len>
|
jpayne@1
|
37597 <Hit_hsps>
|
jpayne@1
|
37598 <Hsp>
|
jpayne@1
|
37599 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37600 <Hsp_bit-score>2089.68</Hsp_bit-score>
|
jpayne@1
|
37601 <Hsp_score>1131</Hsp_score>
|
jpayne@1
|
37602 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
37603 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37604 <Hsp_query-to>1146</Hsp_query-to>
|
jpayne@1
|
37605 <Hsp_hit-from>1454</Hsp_hit-from>
|
jpayne@1
|
37606 <Hsp_hit-to>2599</Hsp_hit-to>
|
jpayne@1
|
37607 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37608 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
37609 <Hsp_identity>1141</Hsp_identity>
|
jpayne@1
|
37610 <Hsp_positive>1141</Hsp_positive>
|
jpayne@1
|
37611 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
37612 <Hsp_align-len>1146</Hsp_align-len>
|
jpayne@1
|
37613 <Hsp_qseq>CCGGAATTTTATAAAAAGAATATGAAAATATTAATGATTGGTACTACGGTGCAATCTTTATTAGGATTCAGATATGAATTACTTAAAGATTTAGTTAGCGCAGGACATGAAGTATATGCGTTATCTGTTGATTATGATTACAAATCGAAGCAGACATTGATTGATATCGGTGTCGTACCGATAGATTATACAATAAGTCGCTCAGGAATTAATCCCTTCAAGGATTTTGTTAATTTTATTTTTTTATATAAGCTAATAAAAAAAATAACACCAGACATCGTTTTTTCTTATTTTACTAAGCCTTGTATTTGGGGATCGCTTGCCGCATATTATGCTGGTGTTCATAAGATTATCGCGATGCTTGAAGGGTTAGGTTTTTTATTTACCGAACAACCATCTGGGATTCCCCAAAAGACAAAAATCCTAAAAAGAATACAGATTCTGCTCTATAGAATAGCTTTTAAGAAAATTAATACACTTATTGTACTTAATGAAGATGATAGGAATGATTTACTTAACGCTGGTTGTATAGAAGATAGAAAAGTATATGTATTGGGGGGTATTGGAATAAATTTAGAGCATTACAAGTATTCACCAGCACCACTTGAACCAATTTCTTTTATTTTCATTGGCCGATTGCTCAGAGAAAAGGGGATTTATGAATTTATCGCTGCTGCTAAAAATATAAAAGAAAGATTTGAAGGGGTGACGTTTAATGTGCTGGGTAATATTGATCCAGCAAACCCTGGTAGTCTAAAACAAAATGAACTTGATACAATTATTAAAGAAGAAATAATTAACTATGTAGGATATGTGAATGATGTTTCTCATTGGTTAAGTAAGAGCAGTGTTTTCGTTTTACCTTCTTATAGAGAAGGATTTCCTCGAAGTACACAGGAGGCTATGGCTATAGGAAGAGCTGTAATAACTACCGATGTTCCTGGATGTAGAGATACTGTTGTTAATAATTCTAATGGTTTTTTAATACAACGGTGGTCTAGCGATGCTCTTGCAGAGGCGATGGAAAAATTTATTTTATCTAAAGAATTGATTCGCGACTGTGGTAAAGAAAGTGCCAGGATAGCTAAAGAAAAATTTGACACCCGAATTACCAATAAGAAAATAATTACTATATTATTGTCTTAA</Hsp_qseq>
|
jpayne@1
|
37614 <Hsp_hseq>CCGGGATTTTATAAAAAGAATATGAAAATATTAATGATTGGTACTACGGTGCAATCTTTATTAGGATTCAGATATGAATTACTTAAAGATTTAGTTAGCGCAGGACATGAAGTATATGCGTTATCTGTTGATTATGATTACAAATCGAAGCAGACATTGATTGATATCGGTGTCGTACCGATAGATTATACAATAAGTCGCTCAGGAATTAATCCCTTCAAGGACTTTGTTAATTTTATTTTTTTATATAAGCTAATAAAAAAAATAACACCAGACATCGTTTTTTCTTATTTTACTAAGCCTTGTATTTGGGGATCGCTTGCCGCATATTATGCTGGTGTTCATAAGATTATCGCGATGCTTGAAGGGTTAGGTTTTTTATTTACCGAACAACCATCTGGGATTCCCCAAAAGACAAAAATCCTAAAAAGAATACAGATTCTGCTCTATAGAATAGCTTTTAAGAAAATTAATACACTTATTGTACTTAATGAAGATGATAGGAATGATTTACTTAACGCTGGTTGTATAGAAGATAGAAAAGTATATGTATTGGGGGGTATTGGAATAAATTTAGAGCATTACAAGTATTCACCAGCACCACTTGAACCAATTTCTTTTATTTTCATTGGCCGATTGCTCAGAGAAAAGGGGATTTATGAATTTATCGCTGCTGCTAAAAATATAAAGGAAAGATTTGAAGGGGTGACGTTTAATGTGCTGGGTAATATTGATCCAGCAAACCCTGGTAGTCTAAAACAAAATGAGCTTGATACAATTATTAAAGAAGAAATAATTAACTATGTAGGATATGTGAATGATGTTTCTCATTGGTTAAGTAAGAGCAGTGTTTTCGTTTTACCTTCTTATAGAGAAGGATTTCCTCGAAGTACACAGGAGGCTATGGCTATAGGAAGAGCTGTAATAACTACCGATGTTCCTGGATGTAGAGATACTGTTGTTAATAATTCTAATGGTTTTTTAATACAACGGTGGTCTAGCGATGCTCTTGCAGAGGCGATGGAAAAATTTATTTTATCTAAAGAATTGATTCGCGACTGTGGTAAAGAAAGTGCCAGGATAGCCAAAGAAAAATTTGACACCCGAATTACCAATAAGAAAATAATTACTATATTATTGTCTTAA</Hsp_hseq>
|
jpayne@1
|
37615 <Hsp_midline>|||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
37616 </Hsp>
|
jpayne@1
|
37617 </Hit_hsps>
|
jpayne@1
|
37618 </Hit>
|
jpayne@1
|
37619 </Iteration_hits>
|
jpayne@1
|
37620 <Iteration_stat>
|
jpayne@1
|
37621 <Statistics>
|
jpayne@1
|
37622 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37623 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37624 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37625 <Statistics_eff-space>61697088</Statistics_eff-space>
|
jpayne@1
|
37626 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37627 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37628 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37629 </Statistics>
|
jpayne@1
|
37630 </Iteration_stat>
|
jpayne@1
|
37631 </Iteration>
|
jpayne@1
|
37632 <Iteration>
|
jpayne@1
|
37633 <Iteration_iter-num>742</Iteration_iter-num>
|
jpayne@1
|
37634 <Iteration_query-ID>Query_742</Iteration_query-ID>
|
jpayne@1
|
37635 <Iteration_query-def>O:22-gene2__1023</Iteration_query-def>
|
jpayne@1
|
37636 <Iteration_query-len>1023</Iteration_query-len>
|
jpayne@1
|
37637 <Iteration_hits>
|
jpayne@1
|
37638 </Iteration_hits>
|
jpayne@1
|
37639 <Iteration_stat>
|
jpayne@1
|
37640 <Statistics>
|
jpayne@1
|
37641 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37642 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37643 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
37644 <Statistics_eff-space>55137854</Statistics_eff-space>
|
jpayne@1
|
37645 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37646 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37647 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37648 </Statistics>
|
jpayne@1
|
37649 </Iteration_stat>
|
jpayne@1
|
37650 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
37651 </Iteration>
|
jpayne@1
|
37652 <Iteration>
|
jpayne@1
|
37653 <Iteration_iter-num>743</Iteration_iter-num>
|
jpayne@1
|
37654 <Iteration_query-ID>Query_743</Iteration_query-ID>
|
jpayne@1
|
37655 <Iteration_query-def>O:23-gene3__454</Iteration_query-def>
|
jpayne@1
|
37656 <Iteration_query-len>454</Iteration_query-len>
|
jpayne@1
|
37657 <Iteration_hits>
|
jpayne@1
|
37658 <Hit>
|
jpayne@1
|
37659 <Hit_num>1</Hit_num>
|
jpayne@1
|
37660 <Hit_id>gnl|BL_ORD_ID|0</Hit_id>
|
jpayne@1
|
37661 <Hit_def>NODE_1_length_2768_cov_35.602423</Hit_def>
|
jpayne@1
|
37662 <Hit_accession>0</Hit_accession>
|
jpayne@1
|
37663 <Hit_len>2768</Hit_len>
|
jpayne@1
|
37664 <Hit_hsps>
|
jpayne@1
|
37665 <Hsp>
|
jpayne@1
|
37666 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37667 <Hsp_bit-score>828.419</Hsp_bit-score>
|
jpayne@1
|
37668 <Hsp_score>448</Hsp_score>
|
jpayne@1
|
37669 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
37670 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37671 <Hsp_query-to>454</Hsp_query-to>
|
jpayne@1
|
37672 <Hsp_hit-from>2287</Hsp_hit-from>
|
jpayne@1
|
37673 <Hsp_hit-to>1834</Hsp_hit-to>
|
jpayne@1
|
37674 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37675 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37676 <Hsp_identity>452</Hsp_identity>
|
jpayne@1
|
37677 <Hsp_positive>452</Hsp_positive>
|
jpayne@1
|
37678 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
37679 <Hsp_align-len>454</Hsp_align-len>
|
jpayne@1
|
37680 <Hsp_qseq>CCAATGAGAAACATCATTCACATATCCTACATAGTTAATTATTTCTTCTTTAATAATTGTATCAAGTTCATTTTGTTTTAGACTACCAGGGTTTGCTGGATCAATATTACCCAGCACATTAAACGTCACCCCTTCAAATCTTTCTTTTATATTTTTAGCAGCAGCGATAAATTCATAAATCCCCTTTTCTCTGAGCAATCGGCCAATGAAAATAAAAGAAATTGGTTCAAGTGGTGCTGGTGAATACTTGTAATGCTCTAAATTTATTCCAATACCCCCCAATACATATACTTTTCTATCTTCTATACAACCAGCGTTAAGTAAATCATTCCTATCATCTTCATTAAGTACAATAAGTGTATTAATTTTCTTAAAAGCTATTCTATAGAGCAGAATCTGTATTCTTTTTAGGATTTTTGTCTTTTGGGGAATCCCAGATGGTTGTTCGGTAAAT</Hsp_qseq>
|
jpayne@1
|
37681 <Hsp_hseq>CCAATGAGAAACATCATTCACATATCCTACATAGTTAATTATTTCTTCTTTAATAATTGTATCAAGCTCATTTTGTTTTAGACTACCAGGGTTTGCTGGATCAATATTACCCAGCACATTAAACGTCACCCCTTCAAATCTTTCCTTTATATTTTTAGCAGCAGCGATAAATTCATAAATCCCCTTTTCTCTGAGCAATCGGCCAATGAAAATAAAAGAAATTGGTTCAAGTGGTGCTGGTGAATACTTGTAATGCTCTAAATTTATTCCAATACCCCCCAATACATATACTTTTCTATCTTCTATACAACCAGCGTTAAGTAAATCATTCCTATCATCTTCATTAAGTACAATAAGTGTATTAATTTTCTTAAAAGCTATTCTATAGAGCAGAATCTGTATTCTTTTTAGGATTTTTGTCTTTTGGGGAATCCCAGATGGTTGTTCGGTAAAT</Hsp_hseq>
|
jpayne@1
|
37682 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
37683 </Hsp>
|
jpayne@1
|
37684 </Hit_hsps>
|
jpayne@1
|
37685 </Hit>
|
jpayne@1
|
37686 </Iteration_hits>
|
jpayne@1
|
37687 <Iteration_stat>
|
jpayne@1
|
37688 <Statistics>
|
jpayne@1
|
37689 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37690 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37691 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
37692 <Statistics_eff-space>23951533</Statistics_eff-space>
|
jpayne@1
|
37693 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37694 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37695 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37696 </Statistics>
|
jpayne@1
|
37697 </Iteration_stat>
|
jpayne@1
|
37698 </Iteration>
|
jpayne@1
|
37699 <Iteration>
|
jpayne@1
|
37700 <Iteration_iter-num>744</Iteration_iter-num>
|
jpayne@1
|
37701 <Iteration_query-ID>Query_744</Iteration_query-ID>
|
jpayne@1
|
37702 <Iteration_query-def>O:22-gene3__411</Iteration_query-def>
|
jpayne@1
|
37703 <Iteration_query-len>411</Iteration_query-len>
|
jpayne@1
|
37704 <Iteration_hits>
|
jpayne@1
|
37705 </Iteration_hits>
|
jpayne@1
|
37706 <Iteration_stat>
|
jpayne@1
|
37707 <Statistics>
|
jpayne@1
|
37708 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37709 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37710 <Statistics_hsp-len>16</Statistics_hsp-len>
|
jpayne@1
|
37711 <Statistics_eff-space>21694190</Statistics_eff-space>
|
jpayne@1
|
37712 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37713 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37714 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37715 </Statistics>
|
jpayne@1
|
37716 </Iteration_stat>
|
jpayne@1
|
37717 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
37718 </Iteration>
|
jpayne@1
|
37719 <Iteration>
|
jpayne@1
|
37720 <Iteration_iter-num>745</Iteration_iter-num>
|
jpayne@1
|
37721 <Iteration_query-ID>Query_745</Iteration_query-ID>
|
jpayne@1
|
37722 <Iteration_query-def>fljB_1,5_Bareilly_CFSAN000189__1511</Iteration_query-def>
|
jpayne@1
|
37723 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
37724 <Iteration_hits>
|
jpayne@1
|
37725 <Hit>
|
jpayne@1
|
37726 <Hit_num>1</Hit_num>
|
jpayne@1
|
37727 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37728 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37729 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37730 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37731 <Hit_hsps>
|
jpayne@1
|
37732 <Hsp>
|
jpayne@1
|
37733 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37734 <Hsp_bit-score>460.936</Hsp_bit-score>
|
jpayne@1
|
37735 <Hsp_score>249</Hsp_score>
|
jpayne@1
|
37736 <Hsp_evalue>1.43363e-131</Hsp_evalue>
|
jpayne@1
|
37737 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37738 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
37739 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
37740 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
37741 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37742 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37743 <Hsp_identity>404</Hsp_identity>
|
jpayne@1
|
37744 <Hsp_positive>404</Hsp_positive>
|
jpayne@1
|
37745 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37746 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
37747 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCTATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATTTCTATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACTTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACTAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
37748 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
37749 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||| |||||||| ||||| ||||||||| |||||||||||||||| || | |||||| | ||||| | |||||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
37750 </Hsp>
|
jpayne@1
|
37751 </Hit_hsps>
|
jpayne@1
|
37752 </Hit>
|
jpayne@1
|
37753 </Iteration_hits>
|
jpayne@1
|
37754 <Iteration_stat>
|
jpayne@1
|
37755 <Statistics>
|
jpayne@1
|
37756 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37757 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37758 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37759 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
37760 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37761 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37762 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37763 </Statistics>
|
jpayne@1
|
37764 </Iteration_stat>
|
jpayne@1
|
37765 </Iteration>
|
jpayne@1
|
37766 <Iteration>
|
jpayne@1
|
37767 <Iteration_iter-num>746</Iteration_iter-num>
|
jpayne@1
|
37768 <Iteration_query-ID>Query_746</Iteration_query-ID>
|
jpayne@1
|
37769 <Iteration_query-def>fljB_1,5_Idikan_SRR1272896__1511</Iteration_query-def>
|
jpayne@1
|
37770 <Iteration_query-len>1511</Iteration_query-len>
|
jpayne@1
|
37771 <Iteration_hits>
|
jpayne@1
|
37772 <Hit>
|
jpayne@1
|
37773 <Hit_num>1</Hit_num>
|
jpayne@1
|
37774 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37775 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37776 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37777 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37778 <Hit_hsps>
|
jpayne@1
|
37779 <Hsp>
|
jpayne@1
|
37780 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37781 <Hsp_bit-score>455.396</Hsp_bit-score>
|
jpayne@1
|
37782 <Hsp_score>246</Hsp_score>
|
jpayne@1
|
37783 <Hsp_evalue>6.67001e-130</Hsp_evalue>
|
jpayne@1
|
37784 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37785 <Hsp_query-to>480</Hsp_query-to>
|
jpayne@1
|
37786 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
37787 <Hsp_hit-to>1264</Hsp_hit-to>
|
jpayne@1
|
37788 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37789 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37790 <Hsp_identity>403</Hsp_identity>
|
jpayne@1
|
37791 <Hsp_positive>403</Hsp_positive>
|
jpayne@1
|
37792 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37793 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
37794 <Hsp_qseq>ATGGCACAAGTAATCAACACTAACAGTCTGTCGCTGCTGACCCAGAATAACCTGAACAAATCCCAGTCCGCACTGGGCACCGCTATCGAGCGTCTGTCTTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGTTTCACCGCGAACATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACAGCACCAACTCCCAGTCTGACCTCGACTCCATCCAGGCTGAAAT-CACCCAGCGCCTGAACGAAATCGACCGTGTATCCGGCCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGTGCCAACGACGGTGAAACTATCGATATCGATCTG</Hsp_qseq>
|
jpayne@1
|
37795 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTG</Hsp_hseq>
|
jpayne@1
|
37796 <Hsp_midline>||||||||||| || || || ||||| ||||||||| ||||||||||||||||||||||||| |||||| ||||| | ||||||| ||||||||||| ||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| | || ||||||||||||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||| | || ||||| | || || || | || ||||||| |||||| || | | || ||| | |||||||| || || || |||||||| || ||||| || ||||||||| | ||||||||| ||| |||||||||||||| ||||| |||||||| || |||||||||</Hsp_midline>
|
jpayne@1
|
37797 </Hsp>
|
jpayne@1
|
37798 </Hit_hsps>
|
jpayne@1
|
37799 </Hit>
|
jpayne@1
|
37800 </Iteration_hits>
|
jpayne@1
|
37801 <Iteration_stat>
|
jpayne@1
|
37802 <Statistics>
|
jpayne@1
|
37803 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37804 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37805 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37806 <Statistics_eff-space>81661128</Statistics_eff-space>
|
jpayne@1
|
37807 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37808 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37809 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37810 </Statistics>
|
jpayne@1
|
37811 </Iteration_stat>
|
jpayne@1
|
37812 </Iteration>
|
jpayne@1
|
37813 <Iteration>
|
jpayne@1
|
37814 <Iteration_iter-num>747</Iteration_iter-num>
|
jpayne@1
|
37815 <Iteration_query-ID>Query_747</Iteration_query-ID>
|
jpayne@1
|
37816 <Iteration_query-def>fliC_f,g_Salmonella.enterica_Adelaide_SRR1068324__1518</Iteration_query-def>
|
jpayne@1
|
37817 <Iteration_query-len>1518</Iteration_query-len>
|
jpayne@1
|
37818 <Iteration_hits>
|
jpayne@1
|
37819 <Hit>
|
jpayne@1
|
37820 <Hit_num>1</Hit_num>
|
jpayne@1
|
37821 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37822 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37823 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37824 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37825 <Hit_hsps>
|
jpayne@1
|
37826 <Hsp>
|
jpayne@1
|
37827 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37828 <Hsp_bit-score>2577.2</Hsp_bit-score>
|
jpayne@1
|
37829 <Hsp_score>1395</Hsp_score>
|
jpayne@1
|
37830 <Hsp_evalue>0</Hsp_evalue>
|
jpayne@1
|
37831 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37832 <Hsp_query-to>1518</Hsp_query-to>
|
jpayne@1
|
37833 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
37834 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
37835 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37836 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37837 <Hsp_identity>1477</Hsp_identity>
|
jpayne@1
|
37838 <Hsp_positive>1477</Hsp_positive>
|
jpayne@1
|
37839 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
37840 <Hsp_align-len>1518</Hsp_align-len>
|
jpayne@1
|
37841 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGTTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTGCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATCCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAGTCCAGCTTCAAGAATGTTACGGGGTATGATACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCCGGTGCTGTAGTGACTGATGCAGCAGCACCGAATAAAGTATATGTAAATGCAGCAAACGGTCAGTTAACAACTGACGATGCGGAAAATAACACTGCGGTTGACCTCTTTAAGACCACTAAATCTACTGCTGGTACCGCTGAAGCCAAAGCGATAGCTGGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGCGTGACTTTTACTATTGATACAAAAACTGGCAATGACGGTAATGGTAAGGTTTCTACTACCATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCGGCGAATGTTGATGCTGCTACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTTAGTACATTAATCAATGAAGACGCTGCCGCTGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCGCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
37842 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAACGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATTACCATCGATCTGCAAAAAATTGATGTGAAAAGCCTTGGCCTTGATGGGTTCAATGTTAATGGGCCAAAAGAAGCGACAGTGGGTGATCTGAAATCCAGCTTCAAGAATGTTACGGGTTACGACACCTATGCAGCGGGTGCCGATAAATATCGTGTAGATATTAATTCAGGTGCTGTAGTAACTGATGATGCAGCACCGGATAAAGTATATGTAAATGCAGCAAACGGTCAGTTGACAACTGACGATGCGGAGAACAACACTGCGGTTAACCTATTCAAGACGACTAAATCTACTGCTGGTACCGATGAAGCCAAGGCGATAGCTAGTGCCATTAAGGGTGGTAAGGAAGGAGATACCTTTGATTATAAAGGTGTGTCTTTTACTATTGATACAAAAGCTGGTAATGACGGTAATGGTACGGTTTCTACTACTATCAATGGTGAAAAAGTTACGTTAACTGTCGCTGATATTACCGCTGGTGCAGCGAATGTTAATGATGCCACCTTACAATCAAGCAAAAATGTTTATACATCTGTAGTGAACGGTCAGTTTACTTTTGATGATAAAACCAAAAACGAGAGTGCGAAACTTTCTGATTTGGAAGCAAACAATGCTGTTAAGGGCGAAAGTAAAATTACAGTAAATGGGGCTGAATATACTGCTAACGCCGCGGGTGATAAGGTCACCTTAGCTGGCAAAACCATGTTTATTGATAAAACAGCTTCTGGCGTAAGTACATTAATCAATGAAGACGCTGCCGCAGCCAAGAAAAGTACCGCTAACCCACTGGCTTCAATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
37843 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| ||| |||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||| || || |||||||||||||||||||||||||||||||||||||||||||| ||||||||||| ||||||| ||||||||| |||||||||||||||||||||||||||||||||| ||||||||||||||||| || |||||||||||| |||| || ||||| |||||||||||||||||||||| ||||||||| ||||||||| |||||||||||||||||||||||||||||||||||||||||||||| ||| |||||||||||||||||||| |||| |||||||||||||||| |||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| ||| ||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
37844 </Hsp>
|
jpayne@1
|
37845 </Hit_hsps>
|
jpayne@1
|
37846 </Hit>
|
jpayne@1
|
37847 </Iteration_hits>
|
jpayne@1
|
37848 <Iteration_stat>
|
jpayne@1
|
37849 <Statistics>
|
jpayne@1
|
37850 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37851 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37852 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37853 <Statistics_eff-space>82044000</Statistics_eff-space>
|
jpayne@1
|
37854 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37855 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37856 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37857 </Statistics>
|
jpayne@1
|
37858 </Iteration_stat>
|
jpayne@1
|
37859 </Iteration>
|
jpayne@1
|
37860 <Iteration>
|
jpayne@1
|
37861 <Iteration_iter-num>748</Iteration_iter-num>
|
jpayne@1
|
37862 <Iteration_query-ID>Query_748</Iteration_query-ID>
|
jpayne@1
|
37863 <Iteration_query-def>fliC_d_Salmonella.enterica_Livingstone_SRR1299429__1521</Iteration_query-def>
|
jpayne@1
|
37864 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
37865 <Iteration_hits>
|
jpayne@1
|
37866 <Hit>
|
jpayne@1
|
37867 <Hit_num>1</Hit_num>
|
jpayne@1
|
37868 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37869 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37870 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37871 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37872 <Hit_hsps>
|
jpayne@1
|
37873 <Hsp>
|
jpayne@1
|
37874 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37875 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
37876 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
37877 <Hsp_evalue>6.62035e-140</Hsp_evalue>
|
jpayne@1
|
37878 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37879 <Hsp_query-to>468</Hsp_query-to>
|
jpayne@1
|
37880 <Hsp_hit-from>1743</Hsp_hit-from>
|
jpayne@1
|
37881 <Hsp_hit-to>1276</Hsp_hit-to>
|
jpayne@1
|
37882 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37883 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37884 <Hsp_identity>401</Hsp_identity>
|
jpayne@1
|
37885 <Hsp_positive>401</Hsp_positive>
|
jpayne@1
|
37886 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37887 <Hsp_align-len>469</Hsp_align-len>
|
jpayne@1
|
37888 <Hsp_qseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCCCAGTCCGCTCTGGGCACCGCTATCGAGCGTCTGTCTTCCGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGTCAGGCAATTGCTAACCGTTTCACCGCGAACATCAAAGGCCTGACTCAGGCTTCCCGTAACGCTAACGACGGTATCTCCATTGCGCAGACCACTGAAGGCGCGCTGAACGAAATCAACAACAACCTGCAGCGTGTGCGTGAACTGGCGGTTCAGTCTGCTAACGGTACTAACTCCCAGTCTGACCTCGACTCTATCCAGGCTGAAAT-CACCCAGCGTCTGAACGAAATCGACCGTGTATCCGGTCAGACTCAGTTCAACGGCGTGAAAGTCCTGGCGCAGGACAACACCCTGACCATCCAGGTTGGCGCGAACGACGGTGAAACTATT</Hsp_qseq>
|
jpayne@1
|
37889 <Hsp_hseq>ATGGCACAAGTCATTAATACAAACAGCCTGTCGCTGTTGACCCAGAATAACCTGAACAAATCTCAGTCCTCACTGAGTTCCGCTATTGAGCGTCTGTCCTCTGGTCTGCGTATCAACAGCGCGAAAGACGATGCGGCAGGCCAGGCGATTGCTAACCGCTTCACTTCTAATATCAAAGGTCTGACTCAGGCTTCCCGTAACGCTAACGACGGCATTTCTATTGCGCAGACCACTGAAGGTGCGCTGAATGAAATTAACAACAACCTGCAGCGTGTGCGTGAGTTGTCTGTTCAGGCCACTAACGGGACTAACTCTGATTCCGATCTGAAATCTATCCAGGATGAAATTCAGCAA-CGTCTGGAAGAAATCGATCGCGTTTCTAATCAGACTCAATTTAACGGTGTTAAAGTCCTGTCTCAGGACAACCAGATGAAAATCCAGGTTGGTGCTAACGATGGTGAAACCATT</Hsp_hseq>
|
jpayne@1
|
37890 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| | ||| | ||||||| ||||||||||| || |||||||||||||||||||||||||||||||||||||| ||||| ||||||||||| ||||| | || |||||||| |||||||||||||||||||||||||||||||| || || |||||||||||||||||||| |||||||| ||||| |||||||||||||||||||||||||| || | |||||| | ||||||| |||||||| | || || || | |||||||||| |||||| || | | |||||| | |||||||| || || || ||||||||| || ||||| || ||||||||| | ||||||||| ||| ||||||||||| || ||||| |||||||| |||</Hsp_midline>
|
jpayne@1
|
37891 </Hsp>
|
jpayne@1
|
37892 <Hsp>
|
jpayne@1
|
37893 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
37894 <Hsp_bit-score>207.945</Hsp_bit-score>
|
jpayne@1
|
37895 <Hsp_score>112</Hsp_score>
|
jpayne@1
|
37896 <Hsp_evalue>2.07594e-55</Hsp_evalue>
|
jpayne@1
|
37897 <Hsp_query-from>1266</Hsp_query-from>
|
jpayne@1
|
37898 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
37899 <Hsp_hit-from>481</Hsp_hit-from>
|
jpayne@1
|
37900 <Hsp_hit-to>226</Hsp_hit-to>
|
jpayne@1
|
37901 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37902 <Hsp_hit-frame>-1</Hsp_hit-frame>
|
jpayne@1
|
37903 <Hsp_identity>208</Hsp_identity>
|
jpayne@1
|
37904 <Hsp_positive>208</Hsp_positive>
|
jpayne@1
|
37905 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
37906 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
37907 <Hsp_qseq>AATTGATGCTGCTTTGGCGCAGGTTGATGCGCTGCGTTCTGACCTGGGTGCGGTTCAGAACCGTTTCAACTCCGCTATCACCAACTTGGGCAATACCGTAAATAACCTGTCTTCTGCCCGTAGCCGTATCGAAGATTCCGACTACGCGACCGAAGTCTCCAACATGTCTCGCGCGCAGATTCTGCAGCAGGCCGGTACCTCCGTTCTGGCGCAGGCTAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_qseq>
|
jpayne@1
|
37908 <Hsp_hseq>AATTGATTCTGCATTGTCAAAAGTGGACGCAGTTCGTTCTTCTCTGGGGGCAATTCAAAACCGTTTTGATTCAGCCATTACCAACCTTGGCAATACGGTAACCAATCTGAACTCCGCCCGTAGCCGTATCGAAGATGCTGACTATGCAACGGAAGTTTCTAATATGTCTAAAGCGCAGATTCTGCAGCAGGCTGGTACTTCCGTTCTGGCGCAGGCGAACCAGGTTCCGCAAAACGTCCTCTCTTTACTGCGTTAA</Hsp_hseq>
|
jpayne@1
|
37909 <Hsp_midline>||||||| |||| ||| | | || || || | |||||| ||||| || |||| |||||||| | || || || |||||| | |||||||| |||| || ||| || ||||||||||||||||||||| | ||||| || || ||||| || || |||||| |||||||||||||||||||| ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
37910 </Hsp>
|
jpayne@1
|
37911 </Hit_hsps>
|
jpayne@1
|
37912 </Hit>
|
jpayne@1
|
37913 </Iteration_hits>
|
jpayne@1
|
37914 <Iteration_stat>
|
jpayne@1
|
37915 <Statistics>
|
jpayne@1
|
37916 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37917 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37918 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37919 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
37920 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37921 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37922 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37923 </Statistics>
|
jpayne@1
|
37924 </Iteration_stat>
|
jpayne@1
|
37925 </Iteration>
|
jpayne@1
|
37926 <Iteration>
|
jpayne@1
|
37927 <Iteration_iter-num>749</Iteration_iter-num>
|
jpayne@1
|
37928 <Iteration_query-ID>Query_749</Iteration_query-ID>
|
jpayne@1
|
37929 <Iteration_query-def>fliC_l,v_from-Nchanga_SRR1153349__1503</Iteration_query-def>
|
jpayne@1
|
37930 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
37931 <Iteration_hits>
|
jpayne@1
|
37932 <Hit>
|
jpayne@1
|
37933 <Hit_num>1</Hit_num>
|
jpayne@1
|
37934 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
37935 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
37936 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
37937 <Hit_len>1962</Hit_len>
|
jpayne@1
|
37938 <Hit_hsps>
|
jpayne@1
|
37939 <Hsp>
|
jpayne@1
|
37940 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
37941 <Hsp_bit-score>477.556</Hsp_bit-score>
|
jpayne@1
|
37942 <Hsp_score>258</Hsp_score>
|
jpayne@1
|
37943 <Hsp_evalue>1.41589e-136</Hsp_evalue>
|
jpayne@1
|
37944 <Hsp_query-from>1024</Hsp_query-from>
|
jpayne@1
|
37945 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
37946 <Hsp_hit-from>1264</Hsp_hit-from>
|
jpayne@1
|
37947 <Hsp_hit-to>1743</Hsp_hit-to>
|
jpayne@1
|
37948 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37949 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
37950 <Hsp_identity>407</Hsp_identity>
|
jpayne@1
|
37951 <Hsp_positive>407</Hsp_positive>
|
jpayne@1
|
37952 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
37953 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
37954 <Hsp_qseq>CAGATCGATATCGATGGTTTCACCGTCGTTGGCACCAACCTGGATGGTCAGGGTGTTGTCCTGCGCCAGGACTTTCACGCCGTTGAACTGAGTCTGGCCGGATACACGGTCGATTTCGTTCAGGCGCTGGGTG-ATTTCAGCCTGGATGGAGTCAAGGTCAGACTGGGAGTTGGTGCTGTTAGCAGACTGAACCGCCAGTTCACGCACACGCTGCAGGTTGTTGTTGATTTCGTTCAGCGCGCCTTCAGTGGTCTGCGCAATGGAGATACCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTGATGTTCGCGGTGAAACGGTTAGCAATTGCCTGACCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCGGAAGACAGACGCTCGATAGCGGTACCCAGAGCAGACTGGGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_qseq>
|
jpayne@1
|
37955 <Hsp_hseq>CAGATCGATGGTAATGGTTTCACCATCGTTAGCACCAACCTGGATTTTCATCTGGTTGTCCTGAGACAGGACTTTAACACCGTTAAATTGAGTCTGATTAGAAACGCGATCGATTTCTTCCAGACG-TTGCTGAATTTCATCCTGGATAGATTTCAGATCGGAATCAGAGTTAGTCCCGTTAGTGGCCTGAACAGACAACTCACGCACACGCTGCAGGTTGTTGTTAATTTCATTCAGCGCACCTTCAGTGGTCTGCGCAATAGAAATGCCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTGATATTAGAAGTGAAGCGGTTAGCAATCGCCTGGCCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAGGACAGACGCTCAATAGCGGAACTCAGTGAGGACTGAGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_hseq>
|
jpayne@1
|
37956 <Hsp_midline>||||||||| ||||||||||| ||||| |||||||||||||| ||| ||||||||| | ||||||||| || ||||| || |||||||| || || || |||||||| | ||| || | | || |||||| ||||||| || | || || || | ||||| || | ||||| | |||||| | || |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||| || || ||||||||||||||||||||||||||||||||||||||||| || | ||||| ||||||||||| ||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| || ||| | ||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
37957 </Hsp>
|
jpayne@1
|
37958 <Hsp>
|
jpayne@1
|
37959 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
37960 <Hsp_bit-score>235.645</Hsp_bit-score>
|
jpayne@1
|
37961 <Hsp_score>127</Hsp_score>
|
jpayne@1
|
37962 <Hsp_evalue>9.40868e-64</Hsp_evalue>
|
jpayne@1
|
37963 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
37964 <Hsp_query-to>256</Hsp_query-to>
|
jpayne@1
|
37965 <Hsp_hit-from>226</Hsp_hit-from>
|
jpayne@1
|
37966 <Hsp_hit-to>481</Hsp_hit-to>
|
jpayne@1
|
37967 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
37968 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
37969 <Hsp_identity>213</Hsp_identity>
|
jpayne@1
|
37970 <Hsp_positive>213</Hsp_positive>
|
jpayne@1
|
37971 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
37972 <Hsp_align-len>256</Hsp_align-len>
|
jpayne@1
|
37973 <Hsp_qseq>TTAACGCAGTAAAGAGAGGACGTTTTGCGGAACCTGGTTCGCCTGCGCCAGAACGGAAGTACCAGCCTGCTGCAGAATCTGCGCGCGAGACATGTTGGAGACTTCGGTCGCGTAGTCGGAATCTTCGATACGGCTACGGGCAGAAGACAGGTTATTTACGGTATTGCCCAGGTTGGTGATAGCGGAGTTGAAACGGTTCTGAACCGCACCCAGGTCAGAACGCAGCGCATCCACCTGCGCCAAAGCAGCATCAATT</Hsp_qseq>
|
jpayne@1
|
37974 <Hsp_hseq>TTAACGCAGTAAAGAGAGGACGTTTTGCGGAACCTGGTTCGCCTGCGCCAGAACGGAAGTACCAGCCTGCTGCAGAATCTGCGCTTTAGACATATTAGAAACTTCCGTTGCATAGTCAGCATCTTCGATACGGCTACGGGCGGAGTTCAGATTGGTTACCGTATTGCCAAGGTTGGTAATGGCTGAATCAAAACGGTTTTGAATTGCCCCCAGAGAAGAACGAACTGCGTCCACTTTTGACAATGCAGAATCAATT</Hsp_hseq>
|
jpayne@1
|
37975 <Hsp_midline>|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||| || || ||||| || || ||||| | ||||||||||||||||||||| || ||| || |||| |||||||| |||||||| || || || | |||||||| |||| || ||||| |||||| | || ||||| | | ||| |||| |||||||</Hsp_midline>
|
jpayne@1
|
37976 </Hsp>
|
jpayne@1
|
37977 </Hit_hsps>
|
jpayne@1
|
37978 </Hit>
|
jpayne@1
|
37979 </Iteration_hits>
|
jpayne@1
|
37980 <Iteration_stat>
|
jpayne@1
|
37981 <Statistics>
|
jpayne@1
|
37982 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
37983 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
37984 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
37985 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
37986 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
37987 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
37988 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
37989 </Statistics>
|
jpayne@1
|
37990 </Iteration_stat>
|
jpayne@1
|
37991 </Iteration>
|
jpayne@1
|
37992 <Iteration>
|
jpayne@1
|
37993 <Iteration_iter-num>750</Iteration_iter-num>
|
jpayne@1
|
37994 <Iteration_query-ID>Query_750</Iteration_query-ID>
|
jpayne@1
|
37995 <Iteration_query-def>fliC_d_from-II-48:d:z6_SRR1168371__1521</Iteration_query-def>
|
jpayne@1
|
37996 <Iteration_query-len>1521</Iteration_query-len>
|
jpayne@1
|
37997 <Iteration_hits>
|
jpayne@1
|
37998 <Hit>
|
jpayne@1
|
37999 <Hit_num>1</Hit_num>
|
jpayne@1
|
38000 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
38001 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
38002 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
38003 <Hit_len>1962</Hit_len>
|
jpayne@1
|
38004 <Hit_hsps>
|
jpayne@1
|
38005 <Hsp>
|
jpayne@1
|
38006 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
38007 <Hsp_bit-score>488.636</Hsp_bit-score>
|
jpayne@1
|
38008 <Hsp_score>264</Hsp_score>
|
jpayne@1
|
38009 <Hsp_evalue>6.62035e-140</Hsp_evalue>
|
jpayne@1
|
38010 <Hsp_query-from>1009</Hsp_query-from>
|
jpayne@1
|
38011 <Hsp_query-to>1521</Hsp_query-to>
|
jpayne@1
|
38012 <Hsp_hit-from>1231</Hsp_hit-from>
|
jpayne@1
|
38013 <Hsp_hit-to>1743</Hsp_hit-to>
|
jpayne@1
|
38014 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
38015 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
38016 <Hsp_identity>432</Hsp_identity>
|
jpayne@1
|
38017 <Hsp_positive>432</Hsp_positive>
|
jpayne@1
|
38018 <Hsp_gaps>4</Hsp_gaps>
|
jpayne@1
|
38019 <Hsp_align-len>515</Hsp_align-len>
|
jpayne@1
|
38020 <Hsp_qseq>ATCAAGTCCCAGCGTTTT-AGAGCTAATTTCTTTTAGATCAATATCAATAGTTTCACCATCGTTGGCGCCAACCTGGATGGTCAGGGTGTTGTCCTGCGCCAGAACTTTCACGCCGTTGAACTGAGTCTGGCCGGATACACGGTCGATTTCGTTCAGACGCTGGGTG-ATTTCAGCCTGGATGGAGTCAAGGTCAGACTGGGAGTTGGTACCGTTAGCAGACTGAACCGCCAGTTCACGCACACGCTGCAGGTTGTTGTTGATTTCGTTCAGCGCGCCTTCAGTGGTCTGCGCAATAGAAATACCGTCGTTAGCGTTACGGGAAGCCTGCGTCAGACCTTTAATGTTCGCGGTGAAACGGTTAGCAATCGCCTGACCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCGGAAGACAGACGCTCGATAGCGGTGCCCAGTGCGGACTGGGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_qseq>
|
jpayne@1
|
38021 <Hsp_hseq>ATCAAGGCCAAGGCTTTTCACATC-AATTTTTTGCAGATCGATGGTAATGGTTTCACCATCGTTAGCACCAACCTGGATTTTCATCTGGTTGTCCTGAGACAGGACTTTAACACCGTTAAATTGAGTCTGATTAGAAACGCGATCGATTTCTTCCAGACG-TTGCTGAATTTCATCCTGGATAGATTTCAGATCGGAATCAGAGTTAGTCCCGTTAGTGGCCTGAACAGACAACTCACGCACACGCTGCAGGTTGTTGTTAATTTCATTCAGCGCACCTTCAGTGGTCTGCGCAATAGAAATGCCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTGATATTAGAAGTGAAGCGGTTAGCAATCGCCTGGCCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAGGACAGACGCTCAATAGCGGAACTCAGTGAGGACTGAGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_hseq>
|
jpayne@1
|
38022 <Hsp_midline>|||||| || || |||| | | | ||||| || ||||| || ||| |||||||||||||| || ||||||||||| ||| ||||||||| | ||| ||||| || ||||| || |||||||| || || || |||||||| | |||||| | | || |||||| ||||||| || | || || || | ||||| || ||||||| | |||||| | || |||||||||||||||||||||||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||| ||||||||||| || || | ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| | ||||| |||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||</Hsp_midline>
|
jpayne@1
|
38023 </Hsp>
|
jpayne@1
|
38024 <Hsp>
|
jpayne@1
|
38025 <Hsp_num>2</Hsp_num>
|
jpayne@1
|
38026 <Hsp_bit-score>213.485</Hsp_bit-score>
|
jpayne@1
|
38027 <Hsp_score>115</Hsp_score>
|
jpayne@1
|
38028 <Hsp_evalue>4.46195e-57</Hsp_evalue>
|
jpayne@1
|
38029 <Hsp_query-from>1</Hsp_query-from>
|
jpayne@1
|
38030 <Hsp_query-to>214</Hsp_query-to>
|
jpayne@1
|
38031 <Hsp_hit-from>226</Hsp_hit-from>
|
jpayne@1
|
38032 <Hsp_hit-to>439</Hsp_hit-to>
|
jpayne@1
|
38033 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
38034 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
38035 <Hsp_identity>181</Hsp_identity>
|
jpayne@1
|
38036 <Hsp_positive>181</Hsp_positive>
|
jpayne@1
|
38037 <Hsp_gaps>0</Hsp_gaps>
|
jpayne@1
|
38038 <Hsp_align-len>214</Hsp_align-len>
|
jpayne@1
|
38039 <Hsp_qseq>TTAACGCAGTAAAGAGAGGACGTTTTGCGGAACCTGGTTAGCCTGCGCCAGAACGGAGGTACCGGCCTGCTGCAGAATCTGCGCGCGAGACATGTTGGAGACTTCGGTCGCGTAGTCGGAATCTTCGATACGGCTACGGGCAGAAGACAGGTTGTTTACAGTATTGCCCAGGTTGGTGATAGCGGAGTTGAAACGGTTCTGTACCGCACCCAGA</Hsp_qseq>
|
jpayne@1
|
38040 <Hsp_hseq>TTAACGCAGTAAAGAGAGGACGTTTTGCGGAACCTGGTTCGCCTGCGCCAGAACGGAAGTACCAGCCTGCTGCAGAATCTGCGCTTTAGACATATTAGAAACTTCCGTTGCATAGTCAGCATCTTCGATACGGCTACGGGCGGAGTTCAGATTGGTTACCGTATTGCCAAGGTTGGTAATGGCTGAATCAAAACGGTTTTGAATTGCCCCCAGA</Hsp_hseq>
|
jpayne@1
|
38041 <Hsp_midline>||||||||||||||||||||||||||||||||||||||| ||||||||||||||||| ||||| |||||||||||||||||||| |||||| || || ||||| || || ||||| | ||||||||||||||||||||| || ||| ||| |||| |||||||| |||||||| || || || | |||||||| || | || ||||||</Hsp_midline>
|
jpayne@1
|
38042 </Hsp>
|
jpayne@1
|
38043 </Hit_hsps>
|
jpayne@1
|
38044 </Hit>
|
jpayne@1
|
38045 </Iteration_hits>
|
jpayne@1
|
38046 <Iteration_stat>
|
jpayne@1
|
38047 <Statistics>
|
jpayne@1
|
38048 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
38049 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
38050 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
38051 <Statistics_eff-space>82208088</Statistics_eff-space>
|
jpayne@1
|
38052 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
38053 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
38054 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
38055 </Statistics>
|
jpayne@1
|
38056 </Iteration_stat>
|
jpayne@1
|
38057 </Iteration>
|
jpayne@1
|
38058 <Iteration>
|
jpayne@1
|
38059 <Iteration_iter-num>751</Iteration_iter-num>
|
jpayne@1
|
38060 <Iteration_query-ID>Query_751</Iteration_query-ID>
|
jpayne@1
|
38061 <Iteration_query-def>fljB_z6_from-II-48:d:z6_SRR1168371__1503</Iteration_query-def>
|
jpayne@1
|
38062 <Iteration_query-len>1503</Iteration_query-len>
|
jpayne@1
|
38063 <Iteration_hits>
|
jpayne@1
|
38064 <Hit>
|
jpayne@1
|
38065 <Hit_num>1</Hit_num>
|
jpayne@1
|
38066 <Hit_id>gnl|BL_ORD_ID|1</Hit_id>
|
jpayne@1
|
38067 <Hit_def>NODE_2_length_1962_cov_108.931880</Hit_def>
|
jpayne@1
|
38068 <Hit_accession>1</Hit_accession>
|
jpayne@1
|
38069 <Hit_len>1962</Hit_len>
|
jpayne@1
|
38070 <Hit_hsps>
|
jpayne@1
|
38071 <Hsp>
|
jpayne@1
|
38072 <Hsp_num>1</Hsp_num>
|
jpayne@1
|
38073 <Hsp_bit-score>444.316</Hsp_bit-score>
|
jpayne@1
|
38074 <Hsp_score>240</Hsp_score>
|
jpayne@1
|
38075 <Hsp_evalue>1.43607e-126</Hsp_evalue>
|
jpayne@1
|
38076 <Hsp_query-from>1024</Hsp_query-from>
|
jpayne@1
|
38077 <Hsp_query-to>1503</Hsp_query-to>
|
jpayne@1
|
38078 <Hsp_hit-from>1264</Hsp_hit-from>
|
jpayne@1
|
38079 <Hsp_hit-to>1743</Hsp_hit-to>
|
jpayne@1
|
38080 <Hsp_query-frame>1</Hsp_query-frame>
|
jpayne@1
|
38081 <Hsp_hit-frame>1</Hsp_hit-frame>
|
jpayne@1
|
38082 <Hsp_identity>401</Hsp_identity>
|
jpayne@1
|
38083 <Hsp_positive>401</Hsp_positive>
|
jpayne@1
|
38084 <Hsp_gaps>2</Hsp_gaps>
|
jpayne@1
|
38085 <Hsp_align-len>481</Hsp_align-len>
|
jpayne@1
|
38086 <Hsp_qseq>CAGATCGATATCGATAGTTTCACCGTCGTTCGCGCCAACCTGAATGGTCAGGGTGTTGTCCTGCGCCAGGACTTTCACGCCGTTGAACTGAGTCTGGCCGGATACACGGTCGATTTCGTTCAGACGCTGGGTG-ATTTCAGCCTGGATGGAGTCGAGGTCAGACTGGGAGTTGGTGCTGTTAGCAGACTGAACCGCCAGTTCACGCACACGCTGCAGGTTATTGTTGATTTCGTTCAGCGCGCCTTCAGTGGTCTGCGCAATAGAAATACCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGGCCTTTGATGTTCGCGGTGAAACGGTTAGCAATCGCCTGACCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCGGAAGACAGACGCTCGATAGCGGTGCCCAGTGCGGACTGGGATTTGTTCAGGTTATTCTGGGTCAGCAGCGACAGACTGTTAGTGTTGATTACTTGTGCCAT</Hsp_qseq>
|
jpayne@1
|
38087 <Hsp_hseq>CAGATCGATGGTAATGGTTTCACCATCGTTAGCACCAACCTGGATTTTCATCTGGTTGTCCTGAGACAGGACTTTAACACCGTTAAATTGAGTCTGATTAGAAACGCGATCGATTTCTTCCAGACG-TTGCTGAATTTCATCCTGGATAGATTTCAGATCGGAATCAGAGTTAGTCCCGTTAGTGGCCTGAACAGACAACTCACGCACACGCTGCAGGTTGTTGTTAATTTCATTCAGCGCACCTTCAGTGGTCTGCGCAATAGAAATGCCGTCGTTAGCGTTACGGGAAGCCTGAGTCAGACCTTTGATATTAGAAGTGAAGCGGTTAGCAATCGCCTGGCCTGCCGCATCGTCTTTCGCGCTGTTGATACGCAGACCAGAGGACAGACGCTCAATAGCGGAACTCAGTGAGGACTGAGATTTGTTCAGGTTATTCTGGGTCAACAGCGACAGGCTGTTTGTATTAATGACTTGTGCCAT</Hsp_hseq>
|
jpayne@1
|
38088 <Hsp_midline>||||||||| || |||||||| ||||| || |||||||| || ||| ||||||||| | ||||||||| || ||||| || |||||||| || || || |||||||| | |||||| | | || |||||| ||||||| || | || || || | ||||| || | ||||| | |||||| | || |||||||||||||||||||| ||||| ||||| |||||||| |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||| |||||||| || | ||||| ||||||||||||||||| |||||||||||||||||||||||||||||||||||||| || ||||||||||| ||||||| | ||||| |||||| ||||||||||||||||||||||||| ||||||||| ||||| || || || |||||||||||</Hsp_midline>
|
jpayne@1
|
38089 </Hsp>
|
jpayne@1
|
38090 </Hit_hsps>
|
jpayne@1
|
38091 </Hit>
|
jpayne@1
|
38092 </Iteration_hits>
|
jpayne@1
|
38093 <Iteration_stat>
|
jpayne@1
|
38094 <Statistics>
|
jpayne@1
|
38095 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
38096 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
38097 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
38098 <Statistics_eff-space>81223560</Statistics_eff-space>
|
jpayne@1
|
38099 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
38100 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
38101 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
38102 </Statistics>
|
jpayne@1
|
38103 </Iteration_stat>
|
jpayne@1
|
38104 </Iteration>
|
jpayne@1
|
38105 <Iteration>
|
jpayne@1
|
38106 <Iteration_iter-num>752</Iteration_iter-num>
|
jpayne@1
|
38107 <Iteration_query-ID>Query_752</Iteration_query-ID>
|
jpayne@1
|
38108 <Iteration_query-def>O-41_wzy-from-Waycross-SRR1233896__1221</Iteration_query-def>
|
jpayne@1
|
38109 <Iteration_query-len>1221</Iteration_query-len>
|
jpayne@1
|
38110 <Iteration_hits>
|
jpayne@1
|
38111 </Iteration_hits>
|
jpayne@1
|
38112 <Iteration_stat>
|
jpayne@1
|
38113 <Statistics>
|
jpayne@1
|
38114 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
38115 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
38116 <Statistics_hsp-len>18</Statistics_hsp-len>
|
jpayne@1
|
38117 <Statistics_eff-space>65799288</Statistics_eff-space>
|
jpayne@1
|
38118 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
38119 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
38120 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
38121 </Statistics>
|
jpayne@1
|
38122 </Iteration_stat>
|
jpayne@1
|
38123 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
38124 </Iteration>
|
jpayne@1
|
38125 <Iteration>
|
jpayne@1
|
38126 <Iteration_iter-num>753</Iteration_iter-num>
|
jpayne@1
|
38127 <Iteration_query-ID>Query_753</Iteration_query-ID>
|
jpayne@1
|
38128 <Iteration_query-def>O-9,46_wbaV-from-II-9,12:z29:1,5-SRR1346254__1002</Iteration_query-def>
|
jpayne@1
|
38129 <Iteration_query-len>1002</Iteration_query-len>
|
jpayne@1
|
38130 <Iteration_hits>
|
jpayne@1
|
38131 </Iteration_hits>
|
jpayne@1
|
38132 <Iteration_stat>
|
jpayne@1
|
38133 <Statistics>
|
jpayne@1
|
38134 <Statistics_db-num>113</Statistics_db-num>
|
jpayne@1
|
38135 <Statistics_db-len>56730</Statistics_db-len>
|
jpayne@1
|
38136 <Statistics_hsp-len>17</Statistics_hsp-len>
|
jpayne@1
|
38137 <Statistics_eff-space>53986865</Statistics_eff-space>
|
jpayne@1
|
38138 <Statistics_kappa>0.46</Statistics_kappa>
|
jpayne@1
|
38139 <Statistics_lambda>1.28</Statistics_lambda>
|
jpayne@1
|
38140 <Statistics_entropy>0.85</Statistics_entropy>
|
jpayne@1
|
38141 </Statistics>
|
jpayne@1
|
38142 </Iteration_stat>
|
jpayne@1
|
38143 <Iteration_message>No hits found</Iteration_message>
|
jpayne@1
|
38144 </Iteration>
|
jpayne@1
|
38145 </BlastOutput_iterations>
|
jpayne@1
|
38146 </BlastOutput>
|
jpayne@1
|
38147
|