Mercurial > repos > jpayne > seqsero_v2

annotate output/H_and_O_and_specific_genes.fasta.ann @ 14:496f5f2b5e75

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author estrain
date Tue, 14 Feb 2023 12:11:27 -0500
parents fae43708974d
children
rev   line source
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jpayne@1 110 0 sdf-I_AF370707__333 (null)
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jpayne@1 329 228550 1476 0
jpayne@1 330 0 fliC_r,i_Salmonella.enterica_Hidalgo_AY353464_r,i__1476 (null)
jpayne@1 331 230026 1476 0
jpayne@1 332 0 fliC_y_Salmonella.enterica_Giza_AY353465_other.y__1521 (null)
jpayne@1 333 231502 1521 0
jpayne@1 334 0 fliC_y_Salmonella.enterica_Freetown_AY353466_other.y__1521 (null)
jpayne@1 335 233023 1521 0
jpayne@1 336 0 fliC_z_Salmonella.enterica_Poona_AY353467_k,z__1500 (null)
jpayne@1 337 234544 1500 0
jpayne@1 338 0 fliC_z_Salmonella.enterica_Indiana_AY353468_k,z__1500 (null)
jpayne@1 339 236044 1500 0
jpayne@1 340 0 fliC_z_Salmonella.enterica_II.16:z:z42_AY353469_k,z__1500 (null)
jpayne@1 341 237544 1500 0
jpayne@1 342 0 fliC_z_Salmonella.enterica_II.40:z:z42_AY353470_k,z__1500 (null)
jpayne@1 343 239044 1500 0
jpayne@1 344 0 fliC_z10_Salmonella.enterica_Istanbul_AY353471_other.z10__1500 (null)
jpayne@1 345 240544 1500 0
jpayne@1 346 0 fliC_z10_Salmonella.enterica_Harrisonburg_AY353472_other.z10__1500 (null)
jpayne@1 347 242044 1500 0
jpayne@1 348 0 fliC_z10_Salmonella.enterica_IIIb.28:z10:z57_AY353473_other.z10__1500 (null)
jpayne@1 349 243544 1500 0
jpayne@1 350 0 fliC_z29_Salmonella.enterica_Tennessee_AY353474_other.z29__1518 (null)
jpayne@1 351 245044 1518 0
jpayne@1 352 0 fliC_z29_Salmonella.enterica_Cubana_AY353475_other.z29__1518 (null)
jpayne@1 353 246562 1518 0
jpayne@1 354 0 fliC_z29_Salmonella.enterica_Mundubbera_AY353476_other.z29__1518 (null)
jpayne@1 355 248080 1518 0
jpayne@1 356 0 fliC_z29_Salmonella.enterica_Mundubbera_AY353477_other.z29__1518 (null)
jpayne@1 357 249598 1518 0
jpayne@1 358 0 fliC_z29_Salmonella.enterica_IIIa.41:z29:-_AY353478_other.z29__1518 (null)
jpayne@1 359 251116 1518 0
jpayne@1 360 0 fliC_z29_Salmonella.enterica_IIIa.62:z29:-_AY353479_other.z29__1518 (null)
jpayne@1 361 252634 1518 0
jpayne@1 362 0 fliC_z35_Salmonella.enterica_Tema_AY353480_other.z35__1488 (null)
jpayne@1 363 254152 1488 0
jpayne@1 364 0 fliC_z35_Salmonella.enterica_Tienba_AY353481_other.z35__1488 (null)
jpayne@1 365 255640 1488 0
jpayne@1 366 0 fliC_z36_Salmonella.enterica_Potosi_AY353482_z36,z38__1266 (null)
jpayne@1 367 257128 1266 0
jpayne@1 368 0 fliC_z36_Salmonella.enterica_Weslaco_AY353483_z36,z38__1266 (null)
jpayne@1 369 258394 1266 0
jpayne@1 370 0 fliC_z36_Salmonella.enterica_IIIa.43:z36:-_AY353484_z36,z38__1266 (null)
jpayne@1 371 259660 1266 0
jpayne@1 372 0 fliC_z36,z38_Salmonella.enterica_IV.1,53:z36,z38:-_AY353485_z36,z38__1266 (null)
jpayne@1 373 260926 1266 0
jpayne@1 374 0 fliC_z36,z38_Salmonella.enterica_IV.43:z36,z38:-_AY353486_z36,z38__1266 (null)
jpayne@1 375 262192 1266 0
jpayne@1 376 0 fliC_z38_Salmonella.enterica_Fresno_AY353487_z36,z38__1266 (null)
jpayne@1 377 263458 1266 0
jpayne@1 378 0 fliC_z38_Salmonella.enterica_Lille_AY353488_z36,z38__1266 (null)
jpayne@1 379 264724 1266 0
jpayne@1 380 0 fliC_z39_Salmonella.enterica_Grancanaria_AY353489_other.z39__1500 (null)
jpayne@1 381 265990 1500 0
jpayne@1 382 0 fliC_z39_Salmonella.enterica_Grancanaria_AY353490_other.z39__1500 (null)
jpayne@1 383 267490 1500 0
jpayne@1 384 0 fliC_z39_Salmonella.enterica_IIIb.6,7:z39:1,2_AY353491_other.z39__1500 (null)
jpayne@1 385 268990 1500 0
jpayne@1 386 0 fliC_z4,z23_Salmonella.enterica_IV.1,40:z4,z23:-_AY353492_z4,z23__1269 (null)
jpayne@1 387 270490 1269 0
jpayne@1 388 0 fliC_z4,z23_Salmonella.enterica_Ajiobo_AY353493_z4,z23__1269 (null)
jpayne@1 389 271759 1269 0
jpayne@1 390 0 fliC_z4,z23_Salmonella.enterica_Ekotedo_AY353494_z4,z23__1269 (null)
jpayne@1 391 273028 1269 0
jpayne@1 392 0 fliC_z4,z23_Salmonella.enterica_IIIa.43:z4,z23:-_AY353495_z4,z23__1269 (null)
jpayne@1 393 274297 1269 0
jpayne@1 394 0 fliC_z4,z23_Salmonella.enterica_IIIa.40:z4,z23:-_AY353496_z4,z23__1242 (null)
jpayne@1 395 275566 1242 0
jpayne@1 396 0 fliC_z4,z23_Salmonella.enterica_IIIa.44:z4,z23:-_AY353497_z4,z23__1275 (null)
jpayne@1 397 276808 1275 0
jpayne@1 398 0 fliC_z4,z23_Salmonella.enterica_Gera_AY353498_z4,z23__1269 (null)
jpayne@1 399 278083 1269 0
jpayne@1 400 0 fliC_z4,z23_Salmonella.enterica_IV.38:z4,z23:-_AY353499_z4,z23__1269 (null)
jpayne@1 401 279352 1269 0
jpayne@1 402 0 fliC_z4,z23,z32_Salmonella.enterica_IIIa.13,23:z4,z23,z32:-_AY353500_z4,z23__1266 (null)
jpayne@1 403 280621 1266 0
jpayne@1 404 0 fliC_z4,z23,z32_Salmonella.enterica_IIIa.56:z4,z23,z32:-_AY353501_z4,z23__1266 (null)
jpayne@1 405 281887 1266 0
jpayne@1 406 0 fliC_z4,z23,z32_Salmonella.enterica_IIIa.44:z4,z23,z32:-_AY353502_z4,z23__1266 (null)
jpayne@1 407 283153 1266 0
jpayne@1 408 0 fliC_z4,z24_Salmonella.enterica_Romanby_AY353503_z4,z23__1281 (null)
jpayne@1 409 284419 1281 0
jpayne@1 410 0 fliC_z4,z24_Salmonella.enterica_II.1,9,12,46,27:z4,z24:1,5_AY353504_z4,z23__1281 (null)
jpayne@1 411 285700 1281 0
jpayne@1 412 0 fliC_z4,z24_Salmonella.enterica_IIIa.53:z4,z24:-_AY353505_z4,z23__1281 (null)
jpayne@1 413 286981 1281 0
jpayne@1 414 0 fliC_z4,z32_Salmonella.enterica_IV.44:z4z32:-_AY353506_z4,z23__1269 (null)
jpayne@1 415 288262 1269 0
jpayne@1 416 0 fliC_z4,z32_Salmonella.enterica_Tallahassee_AY353507_z4,z23__1269 (null)
jpayne@1 417 289531 1269 0
jpayne@1 418 0 fliC_z4,z32_Salmonella.enterica_IIIa.63:z4,z32:-_AY353508_z4,z23__1269 (null)
jpayne@1 419 290800 1269 0
jpayne@1 420 0 fliC_z4,z32_Salmonella.enterica_IIIa.41:z4,z32:-_AY353509_z4,z23__1266 (null)
jpayne@1 421 292069 1266 0
jpayne@1 422 0 fliC_z41_Salmonella.enterica_Ottawa_AY353510_k,z__1491 (null)
jpayne@1 423 293335 1491 0
jpayne@1 424 0 fliC_z41_Salmonella.enterica_Maska_AY353511_k,z__1491 (null)
jpayne@1 425 294826 1491 0
jpayne@1 426 0 fliC_z44_Salmonella.enterica_Quinhon_AY353513_k,z__1491 (null)
jpayne@1 427 296317 1491 0
jpayne@1 428 0 fliC_z47_Salmonella.enterica_IIIb.38:z47:z53_AY353514_l,v__1500 (null)
jpayne@1 429 297808 1500 0
jpayne@1 430 0 fliC_z52_Salmonella.enterica_IIIb.50:z52:z35_AY353516_l,v__1506 (null)
jpayne@1 431 299308 1506 0
jpayne@1 432 0 fliC_z52_Salmonella.enterica_IIIb.65:z52:z35_AY353517_l,v__1506 (null)
jpayne@1 433 300814 1506 0
jpayne@1 434 0 fliC_z6_Salmonella.enterica_II.48:e,n,x,z15:z6_AY353519_k,z__1503 (null)
jpayne@1 435 302320 1503 0
jpayne@1 436 0 fliC_z69_Salmonella.enterica_Pietersburg_AY353520_k,z__1503 (null)
jpayne@1 437 303823 1503 0
jpayne@1 438 0 fliC_f,g,t_Salmonella.enterica_Berta_AY353532_g,m__1527 (null)
jpayne@1 439 305326 1527 0
jpayne@1 440 0 fliC_f,g,t_Salmonella.enterica_Berta_AY353533_g,m__1527 (null)
jpayne@1 441 306853 1527 0
jpayne@1 442 0 fliC_f,g,t_Salmonella.enterica_II.17:f,g,t:e,n,x,z15_AY353534_g,m__1518 (null)
jpayne@1 443 308380 1518 0
jpayne@1 444 0 fliC_f,g,t_Salmonella.enterica_II.1,40:f,g,t:z42_AY353535_g,m__1518 (null)
jpayne@1 445 309898 1518 0
jpayne@1 446 0 fliC_g,m,t_Salmonella.enterica_II.28:g,m,t:e,n,x_AY353536_g,m__1515 (null)
jpayne@1 447 311416 1515 0
jpayne@1 448 0 fliC_g,m,t_Salmonella.enterica_II.6,8:g,m,t:1,7_AY353537_g,m__1515 (null)
jpayne@1 449 312931 1515 0
jpayne@1 450 0 fliC_k_Salmonella.enterica_IIIb.50:k:z_AY353538_k,z__1488 (null)
jpayne@1 451 314446 1488 0
jpayne@1 452 0 fliC_k_Salmonella.enterica_IIIb.61:k:1,5_AY353539_k,z__1488 (null)
jpayne@1 453 315934 1488 4
jpayne@1 454 0 fliC_k_Salmonella.enterica_IIIb.38:k:z53_AY353540_k,z__1485 (null)
jpayne@1 455 317422 1485 0
jpayne@1 456 0 fliC_k_Salmonella.enterica_IIIb.16:k:e,n,x,z15_AY353541_k,z__1485 (null)
jpayne@1 457 318907 1485 0
jpayne@1 458 0 fliC_k_Salmonella.enterica_IIIb.42:k:z35_AY353542_k,z__1485 (null)
jpayne@1 459 320392 1485 0
jpayne@1 460 0 fliC_z4,z32_Salmonella.enterica_IIIa.18:z4,z32:-_AY353543_z4,z23__1269 (null)
jpayne@1 461 321877 1269 0
jpayne@1 462 0 fliC_z4,z23_Salmonella.enterica_I.8,20:z4,z23:-_AY353544_z4,z23__1269 (null)
jpayne@1 463 323146 1269 0
jpayne@1 464 0 fliC_z4,z23_Salmonella.enterica_IIIa.62:z4,z23:-_AY353545_z4,z23__1269 (null)
jpayne@1 465 324415 1269 0
jpayne@1 466 0 fliC_z4,z23_Salmonella.enterica_IIIa.18:z4,z23:-_AY353546_z4,z23__1269 (null)
jpayne@1 467 325684 1269 0
jpayne@1 468 0 fliC_z4,z23_Salmonella.enterica_IIIa.41:z4,z23:-_AY353547_z4,z23__1269 (null)
jpayne@1 469 326953 1269 0
jpayne@1 470 0 fliC_z4,z32_Salmonella.enterica_IV.48:z4,z32:-_AY353548_z4,z23__1269 (null)
jpayne@1 471 328222 1269 0
jpayne@1 472 0 fliC_z4,z23_Salmonella.enterica_I.47:z4,z23:-_AY353549_z4,z23__1269 (null)
jpayne@1 473 329491 1269 0
jpayne@1 474 0 fliC_z4,z32_16_z4,z32_--str_ANHR01000045_z4,z23__1257 (null)
jpayne@1 475 330760 1257 0
jpayne@1 476 0 fliC_i_4,[5],12_i_-str_ABAO01000026_r,i__1476 (null)
jpayne@1 477 332017 1476 0
jpayne@1 478 0 fliC_g,z51_50_g,z51_-str_AOXJ01000042_g,m__1503 (null)
jpayne@1 479 333493 1503 0
jpayne@1 480 0 fliC_z4,z24_Albanystr_AOZW01000055_z4,z23__1269 (null)
jpayne@1 481 334996 1269 0
jpayne@1 482 0 fliC_e,h_Anatumstr_AOZZ01000009_e__1497 (null)
jpayne@1 483 336265 1497 0
jpayne@1 484 0 fliC_e,h_Anatumstr_APAA01000233_e__1497 (null)
jpayne@1 485 337762 1497 0
jpayne@1 486 0 fliC_y_Bareillystr_ALPN01000010_other.y__1509 (null)
jpayne@1 487 339259 1509 0
jpayne@1 488 0 fliC_y_Bareillystr_AOZP01000027_other.y__1508 (null)
jpayne@1 489 340768 1508 0
jpayne@1 490 0 fliC_e,h_Braenderupstr_AOZM01000034_e__1497 (null)
jpayne@1 491 342276 1497 0
jpayne@1 492 0 fliC_z4,z23_Cerrostr_AYVH01000420_z4,z23__1257 (null)
jpayne@1 493 343773 1257 0
jpayne@1 494 0 fliC_z4,z23_Cerrostr_AOZJ01000077_z4,z23__1257 (null)
jpayne@1 495 345030 1257 0
jpayne@1 496 0 fliC_z4,z23_Cerrostr_AYVG01000027_z4,z23__1257 (null)
jpayne@1 497 346287 1257 0
jpayne@1 498 0 fliC_z4,z23_Cerrostr_AYVF01000022_z4,z23__1257 (null)
jpayne@1 499 347544 1257 0
jpayne@1 500 0 fliC_z4,z23_Cerrostr_AYVE01000024_z4,z23__1257 (null)
jpayne@1 501 348801 1257 0
jpayne@1 502 0 fliC_z4,z23_Cerrostr_AYVD01000023_z4,z23__1257 (null)
jpayne@1 503 350058 1257 0
jpayne@1 504 0 fliC_z4,z23_Cerrostr_AYVB01000023_z4,z23__1257 (null)
jpayne@1 505 351315 1257 0
jpayne@1 506 0 fliC_z4,z23_Cerrostr_AYVA01000024_z4,z23__1257 (null)
jpayne@1 507 352572 1257 0
jpayne@1 508 0 fliC_z4,z23_Cerrostr_AYUZ01000022_z4,z23__1257 (null)
jpayne@1 509 353829 1257 0
jpayne@1 510 0 fliC_z4,z23_Cerrostr_AYUY01000025_z4,z23__1257 (null)
jpayne@1 511 355086 1257 0
jpayne@1 512 0 fliC_z4,z23_Cerrostr_AYUX01000023_z4,z23__1257 (null)
jpayne@1 513 356343 1257 0
jpayne@1 514 0 fliC_z4,z23_Cerrostr_AYUW01000021_z4,z23__1257 (null)
jpayne@1 515 357600 1257 0
jpayne@1 516 0 fliC_z4,z23_Cerrostr_AYUV01000029_z4,z23__1257 (null)
jpayne@1 517 358857 1257 0
jpayne@1 518 0 fliC_z4,z23_Cerrostr_AYUU01000023_z4,z23__1257 (null)
jpayne@1 519 360114 1257 0
jpayne@1 520 0 fliC_z4,z23_Cerrostr_AYUT01000021_z4,z23__1257 (null)
jpayne@1 521 361371 1257 0
jpayne@1 522 0 fliC_z4,z23_Cerrostr_AYUS01000023_z4,z23__1257 (null)
jpayne@1 523 362628 1257 0
jpayne@1 524 0 fliC_z4,z23_Cerrostr_AYUR01000024_z4,z23__1257 (null)
jpayne@1 525 363885 1257 0
jpayne@1 526 0 fliC_e,h_Chesterstr_AOZI01000027_e__1497 (null)
jpayne@1 527 365142 1497 0
jpayne@1 528 0 fliC_f,g_Derbystr_AOZH01000145_g,m__1506 (null)
jpayne@1 529 366639 1506 0
jpayne@1 530 0 fliC_g,p_Dublinstr_ATFR01000073_g,m__1506 (null)
jpayne@1 531 368145 1506 0
jpayne@1 532 0 fliC_g,p_Dublinstr_AHUK01000006_g,m__1506 (null)
jpayne@1 533 369651 1506 0
jpayne@1 534 0 fliC_g,p_Dublinstr_AEUK01000013_g,m__1506 (null)
jpayne@1 535 371157 1506 0
jpayne@1 536 0 fliC_g,p_Dublinstr_AHUJ01000052_g,m__1506 (null)
jpayne@1 537 372663 1506 0
jpayne@1 538 0 fliC_g,p_Dublinstr_APMR01000022_g,m__1506 (null)
jpayne@1 539 374169 1506 0
jpayne@1 540 0 fliC_g,m_Enteritidisstr_AKFY01000033_g,m__1506 (null)
jpayne@1 541 375675 1506 0
jpayne@1 542 0 fliC_g,m_Enteritidisstr_AKFZ01000001_g,m__1506 (null)
jpayne@1 543 377181 1506 0
jpayne@1 544 0 fliC_g,m_Enteritidisstr_AKGA01000008_g,m__1506 (null)
jpayne@1 545 378687 1506 0
jpayne@1 546 0 fliC_g,m_Enteritidisstr_ATFS01000055_g,m__1506 (null)
jpayne@1 547 380193 1506 0
jpayne@1 548 0 fliC_g,m_Enteritidisstr_AHUQ01000034_g,m__1506 (null)
jpayne@1 549 381699 1506 0
jpayne@1 550 0 fliC_g,m_Enteritidisstr_ALGV01000126_g,m__1506 (null)
jpayne@1 551 383205 1506 0
jpayne@1 552 0 fliC_g,m_Enteritidisstr_ALHB01000088_g,m__1506 (null)
jpayne@1 553 384711 1506 0
jpayne@1 554 0 fliC_g,m_Enteritidisstr_AHUP01000090_g,m__1506 (null)
jpayne@1 555 386217 1506 0
jpayne@1 556 0 fliC_g,m_Enteritidisstr_AHUM01000184_g,m__1506 (null)
jpayne@1 557 387723 1506 0
jpayne@1 558 0 fliC_g,m_Enteritidisstr_ATFT01000006_g,m__1506 (null)
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jpayne@1 560 0 fliC_g,m_Enteritidisstr_ATFU01000045_g,m__1506 (null)
jpayne@1 561 390735 1506 0
jpayne@1 562 0 fliC_g,m_Enteritidisstr_ATFV01000087_g,m__1506 (null)
jpayne@1 563 392241 1506 0
jpayne@1 564 0 fliC_g,m_Enteritidisstr_AJVD01000007_g,m__1506 (null)
jpayne@1 565 393747 1506 0
jpayne@1 566 0 fliC_g,m_Enteritidisstr_ATFW01000015_g,m__1506 (null)
jpayne@1 567 395253 1506 0
jpayne@1 568 0 fliC_g,m_Enteritidisstr_ATFX01000074_g,m__1506 (null)
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jpayne@1 570 0 fliC_g,m_Enteritidisstr_ATFY01000066_g,m__1506 (null)
jpayne@1 571 398265 1506 0
jpayne@1 572 0 fliC_g,m_Enteritidisstr_ATFZ01000055_g,m__1506 (null)
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jpayne@1 574 0 fliC_g,m_Enteritidisstr_ATGA01000071_g,m__1506 (null)
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jpayne@1 576 0 fliC_g,m_Enteritidisstr_AKFX01000001_g,m__1506 (null)
jpayne@1 577 402783 1506 0
jpayne@1 578 0 fliC_g,m_Enteritidisstr_AKFW01000001_g,m__1506 (null)
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jpayne@1 580 0 fliC_g,m_Enteritidisstr_ALEX01000012_g,m__1506 (null)
jpayne@1 581 405795 1506 0
jpayne@1 582 0 fliC_g,m_Enteritidisstr_ALHD01000038_g,m__1507 (null)
jpayne@1 583 407301 1507 0
jpayne@1 584 0 fliC_g,m_Enteritidisstr_ALFD01000137_g,m__1506 (null)
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jpayne@1 586 0 fliC_g,m_Enteritidisstr_ALHX01000067_g,m__1506 (null)
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jpayne@1 588 0 fliC_g,m_Enteritidisstr_AHUO01000138_g,m__1506 (null)
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jpayne@1 590 0 fliC_g,m_Enteritidisstr_ALEN01000029_g,m__1506 (null)
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jpayne@1 594 0 fliC_g,m_Enteritidisstr_ALID01000034_g,m__1506 (null)
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jpayne@1 596 0 fliC_g,m_Enteritidisstr_ALHE01000053_g,m__1506 (null)
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jpayne@1 598 0 fliC_g,m_Enteritidisstr_ALHF01000001_g,m__1506 (null)
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jpayne@1 600 0 fliC_g,m_Enteritidisstr_ALHU01000052_g,m__1506 (null)
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jpayne@1 602 0 fliC_g,m_Enteritidisstr_ALHG01000036_g,m__1506 (null)
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jpayne@1 990 0 fliC_d_Stanleystr_ARYV01000046_b,d,j__1509 (null)
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jpayne@1 992 0 fliC_d_Stanleystr_AOXV01000153_b,d,j__1509 (null)
jpayne@1 993 714783 1509 0
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jpayne@1 1005 723453 1476 0
jpayne@1 1006 0 fliC_i_Typhimuriumstr_AOXC01000029_r,i__1476 (null)
jpayne@1 1007 724929 1476 0
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jpayne@1 1009 726405 1476 0
jpayne@1 1010 0 fliC_i_Typhimuriumstr_AUQM01000007_r,i__1476 (null)
jpayne@1 1011 727881 1476 0
jpayne@1 1012 0 fliC_i_Typhimuriumstr_AUQO01000013_r,i__1476 (null)
jpayne@1 1013 729357 1476 0
jpayne@1 1014 0 fliC_i_Typhimuriumstr_AUQN01000009_r,i__1476 (null)
jpayne@1 1015 730833 1476 0
jpayne@1 1016 0 fliC_i_Typhimuriumstr_AUQL01000008_r,i__1476 (null)
jpayne@1 1017 732309 1476 0
jpayne@1 1018 0 fliC_i_Typhimuriumstr_AHVA01000002_r,i__1476 (null)
jpayne@1 1019 733785 1476 0
jpayne@1 1020 0 fliC_i_Typhimuriumstr_AHUZ01000001_r,i__1476 (null)
jpayne@1 1021 735261 1476 0
jpayne@1 1022 0 fliC_i_Typhimuriumstr_AOXO01000030_r,i__1476 (null)
jpayne@1 1023 736737 1476 0
jpayne@1 1024 0 fliC_i_Typhimuriumstr_AJTU01000002_r,i__1476 (null)
jpayne@1 1025 738213 1476 0
jpayne@1 1026 0 fliC_i_Typhimuriumstr_AOXD01000106_r,i__1476 (null)
jpayne@1 1027 739689 1476 0
jpayne@1 1028 0 fliC_i_Typhimuriumstr_AMEE02000072_r,i__1476 (null)
jpayne@1 1029 741165 1476 0
jpayne@1 1030 0 fliC_i_Typhimuriumstr_ATWR01000101_r,i__1476 (null)
jpayne@1 1031 742641 1476 0
jpayne@1 1032 0 fliC_i_Typhimuriumstr_AMDZ02000002_r,i__1476 (null)
jpayne@1 1033 744117 1476 0
jpayne@1 1034 0 fliC_i_Typhimuriumstr_AMEA02000017_r,i__1476 (null)
jpayne@1 1035 745593 1476 0
jpayne@1 1036 0 fliC_i_Typhimuriumstr_AERV01000014_r,i__1476 (null)
jpayne@1 1037 747069 1476 0
jpayne@1 1038 0 fliC_d_Typhistr_AJGK01000049_b,d,j__1509 (null)
jpayne@1 1039 748545 1509 0
jpayne@1 1040 0 fliC_d_Typhistr_AKZO01000023_b,d,j__1509 (null)
jpayne@1 1041 750054 1509 0
jpayne@1 1042 0 fliC_d_Typhistr_AKIC01000186_b,d,j__1509 (null)
jpayne@1 1043 751563 1509 0
jpayne@1 1044 0 fliC_d_Typhistr_CAAR01000280_b,d,j__1509 (null)
jpayne@1 1045 753072 1509 0
jpayne@1 1046 0 fliC_d_Typhistr_CAAT01000104_b,d,j__1509 (null)
jpayne@1 1047 754581 1509 0
jpayne@1 1048 0 fliC_d_Typhistr_CAAZ01000150_b,d,j__1509 (null)
jpayne@1 1049 756090 1509 0
jpayne@1 1050 0 fliC_d_Typhistr_CAAW01000401_b,d,j__1509 (null)
jpayne@1 1051 757599 1509 0
jpayne@1 1052 0 fliC_d_Typhistr_CAAX01000878_b,d,j__1509 (null)
jpayne@1 1053 759108 1509 0
jpayne@1 1054 0 fliC_d_Typhistr_AJXA01000113_b,d,j__1509 (null)
jpayne@1 1055 760617 1509 0
jpayne@1 1056 0 fliC_d_Typhistr_JABZ01000017_b,d,j__1509 (null)
jpayne@1 1057 762126 1509 0
jpayne@1 1058 0 fliC_d_Typhistr_AJTD01000160_b,d,j__1509 (null)
jpayne@1 1059 763635 1509 0
jpayne@1 1060 0 fliC_d_Typhistr_AJTE01000190_b,d,j__1509 (null)
jpayne@1 1061 765144 1509 0
jpayne@1 1062 0 fliC_r_Virchowstr_ABFH02000002_r,i__1470 (null)
jpayne@1 1063 766653 1470 0
jpayne@1 1064 0 fliC_r_Weltevredenstr_ABFF01000030_r,i__1470 (null)
jpayne@1 1065 768123 1470 0
jpayne@1 1066 0 fljB_z35_Salmonella.enterica_IIIb.38:k:z35_AY353262_other.z35__1488 (null)
jpayne@1 1067 769593 1488 0
jpayne@1 1068 0 fljB_1,2_Salmonella.enterica_Typhimurium_AY353264_1__1521 (null)
jpayne@1 1069 771081 1521 0
jpayne@1 1070 0 fljB_1,2_Salmonella.enterica_Heidelberg_AY353265_1__1521 (null)
jpayne@1 1071 772602 1521 0
jpayne@1 1072 0 fljB_1,2_Salmonella.enterica_Derby_AY353266_1__1521 (null)
jpayne@1 1073 774123 1521 0
jpayne@1 1074 0 fljB_1,2_Salmonella.enterica_Stanley_AY353267_1__1521 (null)
jpayne@1 1075 775644 1521 0
jpayne@1 1076 0 fljB_1,2_Salmonella.enterica_Typhimurium_AY353268_1__1521 (null)
jpayne@1 1077 777165 1521 0
jpayne@1 1078 0 fljB_1,2_Salmonella.enterica_Muenchen_AY353269_1__1521 (null)
jpayne@1 1079 778686 1521 0
jpayne@1 1080 0 fljB_1,2_Salmonella.enterica_Litchfield_AY353271_1__1521 (null)
jpayne@1 1081 780207 1521 0
jpayne@1 1082 0 fljB_1,2_Salmonella.enterica_1,4,5,12:i:1,2,7_AY353272_1__1521 (null)
jpayne@1 1083 781728 1521 0
jpayne@1 1084 0 fljB_1,5,7_Salmonella.enterica_IIIb.6,7:l,v:1,5,7_AY353273_1__1521 (null)
jpayne@1 1085 783249 1521 0
jpayne@1 1086 0 fljB_1,5,7_Salmonella.enterica_IIIb.48:l,w:1,5,7:z50_AY353274_1__1521 (null)
jpayne@1 1087 784770 1521 0
jpayne@1 1088 0 fljB_1,5_from-Ibadan-micro-assembly_SRR1753831_1__1521 (null)
jpayne@1 1089 786291 1521 0
jpayne@1 1090 0 fljB_1,5_from-Infantis-micro-assembly_SRR1106258_1__1521 (null)
jpayne@1 1091 787812 1521 0
jpayne@1 1092 0 fljB_1,5_from-cdc_Stk2184_1__1521 (null)
jpayne@1 1093 789333 1521 0
jpayne@1 1094 0 fljB_1,2_from-Brazzaville_SRR2058145_1__1521 (null)
jpayne@1 1095 790854 1521 0
jpayne@1 1096 0 fljB_1,2,7_Salmonella.enterica_Kambole_AY353275_1__1521 (null)
jpayne@1 1097 792375 1521 0
jpayne@1 1098 0 fljB_1,2,7_Salmonella.enterica_Eingedi_AY353276_1__1521 (null)
jpayne@1 1099 793896 1521 0
jpayne@1 1100 0 fljB_1,2,7_Salmonella.enterica_Kambole_AY353277_1__1521 (null)
jpayne@1 1101 795417 1521 0
jpayne@1 1102 0 fljB_1,5_Salmonella.enterica_IIIb.61:k:1,5_AY353278_1__1521 (null)
jpayne@1 1103 796938 1521 0
jpayne@1 1104 0 fljB_1,5_Salmonella.enterica_61:l,v:1,5_AY353279_1__1521 (null)
jpayne@1 1105 798459 1521 0
jpayne@1 1106 0 fljB_1,5_Salmonella.enterica_Rough:r:1,5_AY353280_1__1521 (null)
jpayne@1 1107 799980 1521 0
jpayne@1 1108 0 fljB_1,5_Salmonella.enterica_Rough:r:1,5_AY353281_1__1521 (null)
jpayne@1 1109 801501 1521 0
jpayne@1 1110 0 fljB_1,5_Salmonella.enterica_Infantis_AY353282_1__1521 (null)
jpayne@1 1111 803022 1521 0
jpayne@1 1112 0 fljB_1,5_Salmonella.enterica_Bovismorbificans_AY353283_1__1521 (null)
jpayne@1 1113 804543 1521 0
jpayne@1 1114 0 fljB_1,5_Salmonella.enterica_I.43:e,h:1,5_AY353284_1__1521 (null)
jpayne@1 1115 806064 1521 0
jpayne@1 1116 0 fljB_1,5_Salmonella.enterica_Thompson_AY353285_1__1521 (null)
jpayne@1 1117 807585 1521 0
jpayne@1 1118 0 fljB_1,5_Salmonella.enterica_Thompson_AY353286_1__1521 (null)
jpayne@1 1119 809106 1521 0
jpayne@1 1120 0 fljB_1,5_Salmonella.enterica_Thompson_AY353287_1__1521 (null)
jpayne@1 1121 810627 1521 0
jpayne@1 1122 0 fljB_1,5_Muensterstr_AOYX01000059_1__1511 (null)
jpayne@1 1123 812148 1511 0
jpayne@1 1124 0 fljB_1,5_Muensterstr_AOYW01000030_1__1511 (null)
jpayne@1 1125 813659 1511 0
jpayne@1 1126 0 fljB_1,5_Choleraesuis_CP007639_1__1521 (null)
jpayne@1 1127 815170 1521 0
jpayne@1 1128 0 fljB_1,5_Javiana_SAMN02902435_1__1511 (null)
jpayne@1 1129 816691 1511 0
jpayne@1 1130 0 fljB_1,5_Muenster_DTU-unknown(tail&head may be fliC due to extract by mapping)_1__1521
jpayne@1 1131 818202 1521 0
jpayne@1 1132 0 fljB_1,5,7_Salmonella.enterica_Hisingen_AY353289_1__1521 (null)
jpayne@1 1133 819723 1521 0
jpayne@1 1134 0 fljB_1,5,7_Salmonella.enterica_IIIb.48:l,v:1,5,7_AY353290_1__1521 (null)
jpayne@1 1135 821244 1521 0
jpayne@1 1136 0 fljB_1,5,7_Salmonella.enterica_IIIb.47:r:1,5,7_AY353291_1__1521 (null)
jpayne@1 1137 822765 1521 0
jpayne@1 1138 0 fljB_1,6_Salmonella.enterica_Agama_AY353294_1__1521 (null)
jpayne@1 1139 824286 1521 0
jpayne@1 1140 0 fljB_1,6_Salmonella.enterica_Poona_AY353295_1__1521 (null)
jpayne@1 1141 825807 1521 0
jpayne@1 1142 0 fljB_1,7_Salmonella.enterica_Bredeney_AY353296_1__1521 (null)
jpayne@1 1143 827328 1521 0
jpayne@1 1144 0 fljB_1,7_Salmonella.enterica_Nola_AY353298_1__1521 (null)
jpayne@1 1145 828849 1521 0
jpayne@1 1146 0 fljB_1,7_Salmonella.enterica_Pomona_AY353299_1__1521 (null)
jpayne@1 1147 830370 1521 0
jpayne@1 1148 0 fljB_1,7_Salmonella.enterica_from-cdc_Stk1415_1__1521 (null)
jpayne@1 1149 831891 1521 0
jpayne@1 1150 0 fljB_1,7_Salmonella.enterica_Give_AY353300_1__1521 (null)
jpayne@1 1151 833412 1521 0
jpayne@1 1152 0 fljB_e,n,z15_Salmonella.enterica_Sandiego.var.d+_AY353303_e__1506 (null)
jpayne@1 1153 834933 1506 0
jpayne@1 1154 0 fljB_e,n,x_Salmonella.enterica_Singapore_AY353305_e__1506 (null)
jpayne@1 1155 836439 1506 0
jpayne@1 1156 0 fljB_e,n,x,z15_Salmonella.enterica_16:z10:e,n,x,z15_AY353306_e__1506 (null)
jpayne@1 1157 837945 1506 0
jpayne@1 1158 0 fljB_e,n,x_Salmonella.enterica_Chester_AY353307_e__1506 (null)
jpayne@1 1159 839451 1506 0
jpayne@1 1160 0 fljB_e,n,x_Salmonella.enterica_Bonn_AY353308_e__1506 (null)
jpayne@1 1161 840957 1506 0
jpayne@1 1162 0 fljB_e,n,x_Salmonella.enterica_from-CDC_Stk0811_e__1506 (null)
jpayne@1 1163 842463 1506 0
jpayne@1 1164 0 fljB_e,n,x,z15_Salmonella.enterica_IIIb.42:k:e,n,x,z15_AY353309_e__1506 (null)
jpayne@1 1165 843969 1506 0
jpayne@1 1166 0 fljB_e,n,x,z15_Salmonella.enterica_Verity_AY353311_e__1506 (null)
jpayne@1 1167 845475 1506 0
jpayne@1 1168 0 fljB_e,n,x,z15_Salmonella.enterica_IIIb.57:i:e,n,x,z15_AY353312_e__1506 (null)
jpayne@1 1169 846981 1506 0
jpayne@1 1170 0 fljB_e,n,x,z15_Salmonella.enterica_IIIb.47:i:e,n,x,z15_AY353313_e__1506 (null)
jpayne@1 1171 848487 1506 0
jpayne@1 1172 0 fljB_e,n,z15_from-Chailey_SRR1049702_e__1506 (null)
jpayne@1 1173 849993 1506 0
jpayne@1 1174 0 fljB_e,n,x_Salmonella.enterica_II.56:e,n,x:1,7_AY353314_e__1506 (null)
jpayne@1 1175 851499 1506 0
jpayne@1 1176 0 fljB_e,n,x_Salmonella.enterica_Tiergarten_AY353315_e__1506 (null)
jpayne@1 1177 853005 1506 0
jpayne@1 1178 0 fljB_e,n,x_Salmonella.enterica_II.9,46:e,n,x:1,5,7_AY353316_e__1506 (null)
jpayne@1 1179 854511 1506 0
jpayne@1 1180 0 fljB_e,n,x_Salmonella.enterica_Bessi_AY353317_e__1506 (null)
jpayne@1 1181 856017 1506 0
jpayne@1 1182 0 fljB_e,n,x_Salmonella.enterica_Tambacounda_AY353318_e__1506 (null)
jpayne@1 1183 857523 1506 0
jpayne@1 1184 0 fljB_e,n,x_Salmonella.enterica_Kokomlemle_AY353319_e__1506 (null)
jpayne@1 1185 859029 1506 0
jpayne@1 1186 0 fljB_e,n,x_Salmonella.enterica_II.9,12:lw:enx_AY353320_e__1506 (null)
jpayne@1 1187 860535 1506 0
jpayne@1 1188 0 fljB_e,n,x_Salmonella.enterica_Chester_AY353321_e__1506 (null)
jpayne@1 1189 862041 1506 0
jpayne@1 1190 0 fljB_e,n,x_Salmonella.enterica_Gatuni_AY353322_e__1506 (null)
jpayne@1 1191 863547 1506 0
jpayne@1 1192 0 fljB_e,n,z15_Salmonella.enterica_Brandenburg_AY353323_e__1506 (null)
jpayne@1 1193 865053 1506 0
jpayne@1 1194 0 fljB_e,n,z15_Salmonella.enterica_Braenderup_AY353324_e__1506 (null)
jpayne@1 1195 866559 1506 0
jpayne@1 1196 0 fljB_e,n,z15_Salmonella.enterica_Uno_AY353325_e__1506 (null)
jpayne@1 1197 868065 1506 0
jpayne@1 1198 0 fljB_e,n,z15_Salmonella.enterica_Sanktgeorg_AY353326_e__1506 (null)
jpayne@1 1199 869571 1506 0
jpayne@1 1200 0 fljB_k_Salmonella.enterica_II.52:c:k_AY353328_k,z__1488 (null)
jpayne@1 1201 871077 1488 0
jpayne@1 1202 0 fljB_k_Salmonella.enterica_II.13,23:k:z41_AY353329_k,z__1488 (null)
jpayne@1 1203 872565 1488 0
jpayne@1 1204 0 fljB_k_Salmonella.enterica_IIIb.52:c:k_AY353330_k,z__1488 (null)
jpayne@1 1205 874053 1488 0
jpayne@1 1206 0 fljB_l,w_Salmonella.enterica_Ohio_AY353331_l,v__1503 (null)
jpayne@1 1207 875541 1503 0
jpayne@1 1208 0 fljB_l,w_Salmonella.enterica_Gloucester_AY353332_l,v__1503 (null)
jpayne@1 1209 877044 1503 0
jpayne@1 1210 0 fljB_l,z13,z28_Salmonella.enterica_Poano_AY353333_l,v__1506 (null)
jpayne@1 1211 878547 1506 0
jpayne@1 1212 0 fljB_l,z13,z28_Salmonella.enterica_Lutetia_AY353334_l,v__1506 (null)
jpayne@1 1213 880053 1506 0
jpayne@1 1214 0 fliC_l,z13,z28_Salmonella.enterica_Hiduddify_DTU-unknown_l,v__1506 (null)
jpayne@1 1215 881559 1506 0
jpayne@1 1216 0 fljB_z_Salmonella.enterica_IIIb.61:i:z_AY353335_k,z__1500 (null)
jpayne@1 1217 883065 1500 0
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