Mercurial > repos > jpayne > seqsero_v2

annotate test-data/Seqsero_result_allele.tsv @ 16:3b6d5b60968f tip

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author estrain
date Wed, 01 Mar 2023 13:21:51 -0500
parents 87c7eebc6797
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jpayne@7 1 sample_name O_antigen_prediction H1_antigen_prediction H2_antigen_prediction predicted_antigenic_profile predicted_subspecies predicted_serotype note *
jpayne@1 2 forward_25k_1.fastq 13 g,s,t - 13:g,s,t:- I Okatie The serotype(s) is/are the only serotype(s) with the indicated antigenic profile currently recognized in the Kauffmann White Scheme. New serotypes can emerge and the possibility exists that this antigenic profile may emerge in a different subspecies. Identification of strains to the subspecies level should accompany serotype determination; the same antigenic profile in different subspecies is considered different serotypes.