Mercurial > repos > jpayne > seqsero_v2

diff test-data/Seqsero_result_allele.tsv @ 1:fae43708974d

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planemo upload
author jpayne
date Fri, 09 Nov 2018 11:30:45 -0500
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children 87c7eebc6797
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--- /dev/null	Thu Jan 01 00:00:00 1970 +0000
+++ b/test-data/Seqsero_result_allele.tsv	Fri Nov 09 11:30:45 2018 -0500
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+sample_name	O_antigen_prediction	H1_antigen_prediction	H2_antigen_prediction	predicted_antigenic_profile	predicted_subspecies	predicted_serotype	note
+forward_25k_1.fastq	13	g,s,t	-	13:g,s,t:-	I	Okatie	The serotype(s) is/are the only serotype(s) with the indicated antigenic profile currently recognized in the Kauffmann White Scheme.  New serotypes can emerge and the possibility exists that this antigenic profile may emerge in a different subspecies.  Identification of strains to the subspecies level should accompany serotype determination; the same antigenic profile in different subspecies is considered different serotypes.