Mercurial > repos > jpayne > seqsero_v2
view output/H_and_O_and_specific_genes.fasta.ann @ 4:b82e5f3c9187
planemo upload
author | jpayne |
---|---|
date | Thu, 18 Apr 2019 15:18:14 -0400 |
parents | fae43708974d |
children |
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1089753 753 11 0 O-1,3,19_not_in_3,10__130 (null) 0 130 0 0 O-11_wzy__1080 (null) 130 1080 0 0 O-11_wzy-new-from-CP019192__1080 (null) 1210 1080 0 0 O-13_wzx__1236 (null) 2290 1236 0 0 O-16_wzy__1233 (null) 3526 1233 0 0 O-17_wzx__1221 (null) 4759 1221 0 0 O-18_wzy__1323 (null) 5980 1323 0 0 O-21_wzy__1089 (null) 7303 1089 0 0 O-28_wzy__1317 (null) 8392 1317 0 0 O-28_wzy-another-lineage__1296 (null) 9709 1296 0 0 O-3,10_not_in_1,3,19__1519 (null) 11005 1519 0 0 O-3,10_wzx__1539 (null) 12524 1539 0 0 O-30_wzx__1392 (null) 14063 1392 0 0 O-35_wzy__1065 (null) 15455 1065 0 0 O-38_wzy__1083 (null) 16520 1083 0 0 O-39_wzy__1341 (null) 17603 1341 0 0 O-40_wzy__1368 (null) 18944 1368 0 0 O-40_wzy-from-blake-2014K-0489__1368 (null) 20312 1368 0 0 O-41_wzy__1221 (null) 21680 1221 0 0 O-42_wzy__1017 (null) 22901 1017 0 0 O-43_wzy__1344 (null) 23918 1344 0 0 O-44_wzy__1134 (null) 25262 1134 0 0 O-44_wzy2__1247 (null) 26396 1247 0 0 O-45_wzy__1164 (null) 27643 1164 0 0 O-47_wzy__1095 (null) 28807 1095 0 0 O-48_wzy__1194 (null) 29902 1194 0 0 O-48_wzy-from-blake-2014K-0232__1194 (null) 31096 1194 0 0 O-48_wzy-from-2013K-0909__1194 (null) 32290 1194 0 0 O-48_unknown-from-serveral-cdc-new-genomes__4477 (null) 33484 4477 0 0 O-4_wzx__1293 (null) 37961 1293 0 0 O-50_wzy__978 (null) 39254 978 0 0 O-51_wzy__1026 (null) 40232 1026 0 0 O-52_wzy__1065 (null) 41258 1065 0 0 O-53_wzy__1119 (null) 42323 1119 0 0 O-54_wbbF__1380 (null) 43442 1380 0 0 O-55_wzy__1128 (null) 44822 1128 0 0 O-56_wzy__1179 (null) 45950 1179 0 0 O-57_wzy__1038 (null) 47129 1038 0 0 O-58_wzy__1263 (null) 48167 1263 0 0 O-59_wzy__1236 (null) 49430 1236 0 0 O-6,14_wzy__1344 (null) 50666 1344 0 0 O-6,14_wzy-from-Stk2184__1344 (null) 52010 1344 0 0 O-60_wzy__1050 (null) 53354 1050 0 0 O-61_wzy__1326 (null) 54404 1326 0 0 O-62_wzy__1023 (null) 55730 1023 0 0 O-63_wzy__945 (null) 56753 945 0 0 O-65_wzy__1125 (null) 57698 1125 0 0 O-66_wzx__1257 (null) 58823 1257 0 0 O-67_wzt__741 (null) 60080 741 0 0 O-7_wzy__1080 (null) 60821 1080 0 0 O-8_wzy__1200 (null) 61901 1200 0 0 O-9,46,27_partial_wzy__1019 (null) 63101 1019 0 0 O-9,46_wbaV__1002 (null) 64120 1002 0 0 O-9,46_wzy__1191 (null) 65122 1191 0 0 sdf-I_AF370707__333 (null) 66313 333 0 0 fliC_z65_Salmonella.bongori_V.66:z65:-_AY353259_other.z65__1506 (null) 66646 1506 0 0 fliC_z81_Salmonella.bongori_66:z81:-_AY353260_other.z81__1485 (null) 68152 1485 0 0 fliC_z81_Salmonella.bongori_40:z81:-_AY353261_other.z81__1485 (null) 69637 1485 0 0 fliC_a_Salmonella.enterica_Paratyphi.A_AY353356_other.a__1488 (null) 71122 1488 0 0 fliC_a_Salmonella.enterica_Paratyphi.A_AY353357_other.a__1488 (null) 72610 1488 0 0 fliC_a_Salmonella.enterica_from-cdc-Stk2184_other.a__1488 (null) 74098 1488 0 0 fliC_b_Salmonella.enterica_Paratyphi.B_AY353358_b,d,j__1488 (null) 75586 1488 0 0 fliC_b_Salmonella.enterica_from-cdc_Stk1415_b,d,j__1488 (null) 77074 1488 0 0 fliC_b_Salmonella.enterica_Paratyphi.B_AY353359_b,d,j__1488 (null) 78562 1488 0 0 fliC_b_Salmonella.enterica_Niederoderwitz_AY353360_b,d,j__1488 (null) 80050 1488 0 0 fliC_b_Salmonella.enterica_I.6,7:b:z33_AY353361_b,d,j__1488 (null) 81538 1488 0 0 fliC_b_Salmonella.enterica_IIIb.6,14:b:e,n,x,z15_AY353362_b,d,j__1488 (null) 83026 1488 0 0 fliC_b_Salmonella.enterica_IIIa.47:b:-_AY353363_b,d,j__1488 (null) 84514 1488 0 0 fliC_b_Salmonella.enterica_Urbana_No-upload-yet_b,d,j__1488 (null) 86002 1488 0 0 fliC_c_Salmonella.enterica_Choleraesuis_AY353364_other.c__1506 (null) 87490 1506 0 0 fliC_c_Salmonella.enterica_Choleraesuis_AY353365_other.c__1506 (null) 88996 1506 0 0 fliC_c_Salmonella.enterica_IIIb.57:c:z:z60_AY353366_other.c__1506 (null) 90502 1506 0 0 fliC_c_Salmonella.enterica_Jericho_AY353367_other.c__1506 (null) 92008 1506 0 0 fliC_c_Salmonella.enterica_Goeteborg_AY353368_other.c__1506 (null) 93514 1506 0 0 fliC_c_Salmonella.enterica_IIIb.41:c:e,n,x,z15_AY353369_other.c__1506 (null) 95020 1506 0 0 fliC_c_Salmonella.enterica_IIIb.57:c:e,n,x,z15_AY353370_other.c__1506 (null) 96526 1506 0 0 fliC_d_Salmonella.enterica_Schwarzengrund_AY353371_b,d,j__1521 (null) 98032 1521 0 0 fliC_d_Salmonella.enterica_Virginia_AY353372_b,d,j__1521 (null) 99553 1521 0 0 fliC_d_Salmonella.enterica_Muenchen_AY353373_b,d,j__1521 (null) 101074 1521 0 0 fliC_d_Salmonella.enterica_Typhi_AY353374_b,d,j__1521 (null) 102595 1521 0 0 fliC_d_Salmonella.enterica_Typhi_AY353375_b,d,j__1521 (null) 104116 1521 0 0 fliC_d_Salmonella.enterica_Isangi_AY353376_b,d,j__1521 (null) 105637 1521 0 0 fliC_e,h_Salmonella.enterica_Saintpaul_AY353377_e__1509 (null) 107158 1509 0 0 fliC_e,h_Salmonella.enterica_Sandiego.var.d+_AY353378_e__1509 (null) 108667 1509 0 0 fliC_e,h_Salmonella.enterica_Newport_AY353379_e__1509 (null) 110176 1509 0 0 fliC_f,g_Salmonella.enterica_Derby_AY353380_g,m__1518 (null) 111685 1518 0 0 fliC_f,g_Salmonella.enterica_Derby_AY353381_g,m__1518 (null) 113203 1518 0 0 fliC_f,g,m,t_Salmonella.enterica_II.6,8:f,g,m,t:.e,n,x_AY353382_g,m__1518 (null) 114721 1518 0 0 fliC_f,g,s_Salmonella.enterica_Agona_AY353383_g,m__1518 (null) 116239 1518 0 0 fliC_f,g,s_Salmonella.enterica_Agona_AY353384_g,m__1518 (null) 117757 1518 0 0 fliC_f,g,s_Salmonella.enterica_DTU-genomes_unknown_g,m__1518 (null) 119275 1518 0 0 fliC_g,m_Salmonella.enterica_Enteritidis_AY353386_g,m__1518 (null) 120793 1518 0 0 fliC_g,m_Salmonella.enterica_Enteritidis_AY353387_g,m__1518 (null) 122311 1518 0 0 fliC_g,m_Salmonella.enterica_Enteritidis_AY353388_g,m__1518 (null) 123829 1518 0 0 fliC_g,m_Salmonella.enterica_Enteritidis_AY353389_g,m__1518 (null) 125347 1518 0 0 fliC_g,m,s_Salmonella.enterica_Montevideo_AY353391_g,m__1518 (null) 126865 1518 0 0 fliC_g,m,s_Salmonella.enterica_Montevideo_AY353392_g,m__1518 (null) 128383 1518 0 0 fliC_g,m,q_Salmonella.enterica_Blegdam_AY353393_g,m__1518 (null) 129901 1518 0 0 fliC_g,m,s_Salmonella.enterica_Amsterdam.var.O15+_AY353394_g,m__1518 (null) 131419 1518 0 0 fliC_g,m,s_Salmonella.enterica_Amsterdam_AY353395_g,m__1518 (null) 132937 1518 0 0 fliC_g,m,s,t_Salmonella.enterica_II.50:.g,m,s,t:1,5_AY353396_g,m__1515 (null) 134455 1515 0 0 fliC_g,m,s,t_Salmonella.enterica_II.43:g,m,s,t:z42_AY353397_g,m__1515 (null) 135970 1515 0 0 fliC_g,m_Salmonella.enterica_Enteritidis_AY353398_g,m__1518 (null) 137485 1518 0 0 fliC_g,p_Salmonella.enterica_Dublin_AY353399_g,m__1518 (null) 139003 1518 0 0 fliC_g,p_Salmonella.enterica_Dublin_AY353400_g,m__1518 (null) 140521 1518 0 0 fliC_g,p,s_Salmonella.enterica_Naestved_AY353401_g,m__1518 (null) 142039 1518 0 0 fliC_g,p,u_Salmonella.enterica_Rostock_AY353402_g,m__1518 (null) 143557 1518 0 0 fliC_g,q_Salmonella.enterica_Moscow_AY353403_g,m__1518 (null) 145075 1518 0 0 fliC_g,q_Salmonella.enterica_Moscow_AY353404_g,m__1518 (null) 146593 1518 0 0 fliC_g,s,t_Salmonella.enterica_Missouri_AY353405_g,m__1518 (null) 148111 1518 0 0 fliC_g,s,t_Salmonella.enterica_Senftenberg_AY353406_g,m__1518 (null) 149629 1518 0 0 fliC_g,t_Salmonella.enterica_Agodi_AY353407_g,m__1518 (null) 151147 1518 0 0 fliC_g,t_Salmonella.enterica_II.16:g,t:1,5_AY353408_g,m__1518 (null) 152665 1518 0 0 fliC_m,p,t,u_Salmonella.enterica_Haelsingborg_AY353409_g,m__1527 (null) 154183 1527 0 0 fliC_m,p,t,u_Salmonella.enterica_Haelsingborg_AY353410_g,m__1527 (null) 155710 1527 0 0 fliC_m,t_Salmonella.enterica_Oranienburg_AY353411_g,m__1527 (null) 157237 1527 0 0 fliC_m,t_Salmonella.enterica_Oranienburg_AY353412_g,m__1527 (null) 158764 1527 0 0 fliC_g,z51_Salmonella.enterica_Travis_AY353413_g,m__1515 (null) 160291 1515 0 0 fliC_g,z51_Salmonella.enterica_IIIa.45:g,z51:-_AY353414_g,m__1515 (null) 161806 1515 0 0 fliC_g,z62_Salmonella.enterica_II.9,46:g,z62:-_AY353415_g,m__1515 (null) 163321 1515 0 0 fliC_g,z62_Salmonella.enterica_II.50:g,z62:e,n,x_AY353416_g,m__1515 (null) 164836 1515 0 0 fliC_i_Salmonella.enterica_IIIb.61:i:z_AY353417_r,i__1488 (null) 166351 1488 0 0 fliC_i_Salmonella.enterica_Augustenborg_AY353418_r,i__1488 (null) 167839 1488 0 0 fliC_i_Salmonella.enterica_IIIb.48:i:z_AY353419_r,i__1488 (null) 169327 1488 0 0 fliC_i_Salmonella.enterica_Typhimurium_AY353420_r,i__1488 (null) 170815 1488 0 0 fliC_i_Salmonella.enterica_Bandia_AY353421_r,i__1488 (null) 172303 1488 0 0 fliC_i_Salmonella.enterica_Idikan_AY353422_r,i__1488 (null) 173791 1488 0 0 fliC_i_Salmonella.enterica_Typhimurium_AY353423_r,i__1488 (null) 175279 1488 0 0 fliC_i_Salmonella.enterica_Typhimurium_AY353424_r,i__1488 (null) 176767 1488 0 0 fliC_i_Salmonella.enterica_II.4,12,27:i:z35_AY353425_r,i__1488 (null) 178255 1488 0 0 fliC_i_Salmonella.enterica_Augustenborg_AY353426_r,i__1488 (null) 179743 1488 0 0 fliC_i_Salmonella.enterica_Kentucky_AY353427_r,i__1488 (null) 181231 1488 0 0 fliC_i_Salmonella.enterica_Lindenburg_AY353428_r,i__1488 (null) 182719 1488 0 0 fliC_i_Salmonella.enterica_Gloucester_AY353429_r,i__1488 (null) 184207 1488 0 0 fliC_i_Salmonella.enterica_Agama_AY353430_r,i__1488 (null) 185695 1488 0 0 fliC_i_Salmonella.enterica_IIIb.21:i:e,n,x,z15_AY353431_r,i__1488 (null) 187183 1488 0 0 fliC_i_Salmonella.enterica_IIIb.57:i:e,n,x,z15_AY353432_r,i__1488 (null) 188671 1488 0 0 fliC_j_Salmonella.enterica_Typhi.var.j+_AY353433_b,d,j__1260 (null) 190159 1260 0 0 fliC_j_Salmonella.enterica_Typhi.var.j+_AY353434_b,d,j__1260 (null) 191419 1260 0 0 fliC_k_Salmonella.enterica_IIIb.42:k:e,n,x,z15_AY353436_k,z__1488 (null) 192679 1488 0 0 fliC_k_Salmonella.enterica_IIIb.17:k:z_AY353437_k,z__1488 (null) 194167 1488 0 0 fliC_k_Salmonella.enterica_IIIb.65:k:z_AY353438_k,z__1485 (null) 195655 1485 0 0 fliC_k_Salmonella.enterica_IIIb.38:k:z35_AY353439_k,z__1485 (null) 197140 1485 0 0 fliC_k_Salmonella.enterica_IIIb.50:k:z53_AY353440_k,z__1488 (null) 198625 1488 1 0 fliC_k_Salmonella.enterica_Inverness_AY353441_k,z__1488 (null) 200113 1488 0 0 fliC_k_Salmonella.enterica_Blockley_AY353442_k,z__1488 (null) 201601 1488 0 0 fliC_l,v_Salmonella.enterica_Give_AY353443_l,v__1503 (null) 203089 1503 0 0 fliC_l,v_Salmonella.enterica_Brandenburg_AY353444_l,v__1503 (null) 204592 1503 0 0 fliC_l,v_Salmonella.enterica_IIIb.38:l,v:z54_AY353445_l,v__1503 (null) 206095 1503 0 0 fliC_l,w_Salmonella.enterica_Ayton_AY353446_l,v__1503 (null) 207598 1503 0 0 fliC_l,w_Salmonella.enterica_Glidji_AY353447_l,v__1503 (null) 209101 1503 0 0 fliC_l,z13_Salmonella.enterica_Kenya_AY353449_l,v__1503 (null) 210604 1503 0 0 fliC_l,z13_Salmonella.enterica_Westerstede_AY353450_l,v__1503 (null) 212107 1503 0 0 fliC_l,z13,z28_Salmonella.enterica_Connecticut_AY353452_l,v__1506 (null) 213610 1506 0 0 fliC_l,z13,z28_Salmonella.enterica_Fallowfield_AY353453_l,v__1506 (null) 215116 1506 0 0 fliC_l,z13,z28_Salmonella.enterica_from-CDC_2011K-0215_l,v__1506 (null) 216622 1506 0 0 fliC_l,z28_Salmonella.enterica_Javiana_AY353454_l,v__1506 (null) 218128 1506 0 0 fliC_l,z28_Salmonella.enterica_Javiana_AY353455_l,v__1506 (null) 219634 1506 0 0 fliC_r_Salmonella.enterica_Rubislaw_AY353458_r,i__1482 (null) 221140 1482 0 0 fliC_r_Salmonella.enterica_Heidelberg_AY353459_r,i__1482 (null) 222622 1482 0 0 fliC_r_Salmonella.enterica_IIIb.35:r:z61_AY353460_r,i__1482 (null) 224104 1482 0 0 fliC_r_Salmonella.enterica_IIIb.58:r:z53:z47_AY353461_r,i__1482 (null) 225586 1482 0 0 fliC_r_Salmonella.enterica_IIIb.38:r:e,n,x,z15_AY353462_r,i__1482 (null) 227068 1482 0 0 fliC_r,i_Salmonella.enterica_Bovismorbificans_AY353463_r,i__1476 (null) 228550 1476 0 0 fliC_r,i_Salmonella.enterica_Hidalgo_AY353464_r,i__1476 (null) 230026 1476 0 0 fliC_y_Salmonella.enterica_Giza_AY353465_other.y__1521 (null) 231502 1521 0 0 fliC_y_Salmonella.enterica_Freetown_AY353466_other.y__1521 (null) 233023 1521 0 0 fliC_z_Salmonella.enterica_Poona_AY353467_k,z__1500 (null) 234544 1500 0 0 fliC_z_Salmonella.enterica_Indiana_AY353468_k,z__1500 (null) 236044 1500 0 0 fliC_z_Salmonella.enterica_II.16:z:z42_AY353469_k,z__1500 (null) 237544 1500 0 0 fliC_z_Salmonella.enterica_II.40:z:z42_AY353470_k,z__1500 (null) 239044 1500 0 0 fliC_z10_Salmonella.enterica_Istanbul_AY353471_other.z10__1500 (null) 240544 1500 0 0 fliC_z10_Salmonella.enterica_Harrisonburg_AY353472_other.z10__1500 (null) 242044 1500 0 0 fliC_z10_Salmonella.enterica_IIIb.28:z10:z57_AY353473_other.z10__1500 (null) 243544 1500 0 0 fliC_z29_Salmonella.enterica_Tennessee_AY353474_other.z29__1518 (null) 245044 1518 0 0 fliC_z29_Salmonella.enterica_Cubana_AY353475_other.z29__1518 (null) 246562 1518 0 0 fliC_z29_Salmonella.enterica_Mundubbera_AY353476_other.z29__1518 (null) 248080 1518 0 0 fliC_z29_Salmonella.enterica_Mundubbera_AY353477_other.z29__1518 (null) 249598 1518 0 0 fliC_z29_Salmonella.enterica_IIIa.41:z29:-_AY353478_other.z29__1518 (null) 251116 1518 0 0 fliC_z29_Salmonella.enterica_IIIa.62:z29:-_AY353479_other.z29__1518 (null) 252634 1518 0 0 fliC_z35_Salmonella.enterica_Tema_AY353480_other.z35__1488 (null) 254152 1488 0 0 fliC_z35_Salmonella.enterica_Tienba_AY353481_other.z35__1488 (null) 255640 1488 0 0 fliC_z36_Salmonella.enterica_Potosi_AY353482_z36,z38__1266 (null) 257128 1266 0 0 fliC_z36_Salmonella.enterica_Weslaco_AY353483_z36,z38__1266 (null) 258394 1266 0 0 fliC_z36_Salmonella.enterica_IIIa.43:z36:-_AY353484_z36,z38__1266 (null) 259660 1266 0 0 fliC_z36,z38_Salmonella.enterica_IV.1,53:z36,z38:-_AY353485_z36,z38__1266 (null) 260926 1266 0 0 fliC_z36,z38_Salmonella.enterica_IV.43:z36,z38:-_AY353486_z36,z38__1266 (null) 262192 1266 0 0 fliC_z38_Salmonella.enterica_Fresno_AY353487_z36,z38__1266 (null) 263458 1266 0 0 fliC_z38_Salmonella.enterica_Lille_AY353488_z36,z38__1266 (null) 264724 1266 0 0 fliC_z39_Salmonella.enterica_Grancanaria_AY353489_other.z39__1500 (null) 265990 1500 0 0 fliC_z39_Salmonella.enterica_Grancanaria_AY353490_other.z39__1500 (null) 267490 1500 0 0 fliC_z39_Salmonella.enterica_IIIb.6,7:z39:1,2_AY353491_other.z39__1500 (null) 268990 1500 0 0 fliC_z4,z23_Salmonella.enterica_IV.1,40:z4,z23:-_AY353492_z4,z23__1269 (null) 270490 1269 0 0 fliC_z4,z23_Salmonella.enterica_Ajiobo_AY353493_z4,z23__1269 (null) 271759 1269 0 0 fliC_z4,z23_Salmonella.enterica_Ekotedo_AY353494_z4,z23__1269 (null) 273028 1269 0 0 fliC_z4,z23_Salmonella.enterica_IIIa.43:z4,z23:-_AY353495_z4,z23__1269 (null) 274297 1269 0 0 fliC_z4,z23_Salmonella.enterica_IIIa.40:z4,z23:-_AY353496_z4,z23__1242 (null) 275566 1242 0 0 fliC_z4,z23_Salmonella.enterica_IIIa.44:z4,z23:-_AY353497_z4,z23__1275 (null) 276808 1275 0 0 fliC_z4,z23_Salmonella.enterica_Gera_AY353498_z4,z23__1269 (null) 278083 1269 0 0 fliC_z4,z23_Salmonella.enterica_IV.38:z4,z23:-_AY353499_z4,z23__1269 (null) 279352 1269 0 0 fliC_z4,z23,z32_Salmonella.enterica_IIIa.13,23:z4,z23,z32:-_AY353500_z4,z23__1266 (null) 280621 1266 0 0 fliC_z4,z23,z32_Salmonella.enterica_IIIa.56:z4,z23,z32:-_AY353501_z4,z23__1266 (null) 281887 1266 0 0 fliC_z4,z23,z32_Salmonella.enterica_IIIa.44:z4,z23,z32:-_AY353502_z4,z23__1266 (null) 283153 1266 0 0 fliC_z4,z24_Salmonella.enterica_Romanby_AY353503_z4,z23__1281 (null) 284419 1281 0 0 fliC_z4,z24_Salmonella.enterica_II.1,9,12,46,27:z4,z24:1,5_AY353504_z4,z23__1281 (null) 285700 1281 0 0 fliC_z4,z24_Salmonella.enterica_IIIa.53:z4,z24:-_AY353505_z4,z23__1281 (null) 286981 1281 0 0 fliC_z4,z32_Salmonella.enterica_IV.44:z4z32:-_AY353506_z4,z23__1269 (null) 288262 1269 0 0 fliC_z4,z32_Salmonella.enterica_Tallahassee_AY353507_z4,z23__1269 (null) 289531 1269 0 0 fliC_z4,z32_Salmonella.enterica_IIIa.63:z4,z32:-_AY353508_z4,z23__1269 (null) 290800 1269 0 0 fliC_z4,z32_Salmonella.enterica_IIIa.41:z4,z32:-_AY353509_z4,z23__1266 (null) 292069 1266 0 0 fliC_z41_Salmonella.enterica_Ottawa_AY353510_k,z__1491 (null) 293335 1491 0 0 fliC_z41_Salmonella.enterica_Maska_AY353511_k,z__1491 (null) 294826 1491 0 0 fliC_z44_Salmonella.enterica_Quinhon_AY353513_k,z__1491 (null) 296317 1491 0 0 fliC_z47_Salmonella.enterica_IIIb.38:z47:z53_AY353514_l,v__1500 (null) 297808 1500 0 0 fliC_z52_Salmonella.enterica_IIIb.50:z52:z35_AY353516_l,v__1506 (null) 299308 1506 0 0 fliC_z52_Salmonella.enterica_IIIb.65:z52:z35_AY353517_l,v__1506 (null) 300814 1506 0 0 fliC_z6_Salmonella.enterica_II.48:e,n,x,z15:z6_AY353519_k,z__1503 (null) 302320 1503 0 0 fliC_z69_Salmonella.enterica_Pietersburg_AY353520_k,z__1503 (null) 303823 1503 0 0 fliC_f,g,t_Salmonella.enterica_Berta_AY353532_g,m__1527 (null) 305326 1527 0 0 fliC_f,g,t_Salmonella.enterica_Berta_AY353533_g,m__1527 (null) 306853 1527 0 0 fliC_f,g,t_Salmonella.enterica_II.17:f,g,t:e,n,x,z15_AY353534_g,m__1518 (null) 308380 1518 0 0 fliC_f,g,t_Salmonella.enterica_II.1,40:f,g,t:z42_AY353535_g,m__1518 (null) 309898 1518 0 0 fliC_g,m,t_Salmonella.enterica_II.28:g,m,t:e,n,x_AY353536_g,m__1515 (null) 311416 1515 0 0 fliC_g,m,t_Salmonella.enterica_II.6,8:g,m,t:1,7_AY353537_g,m__1515 (null) 312931 1515 0 0 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fljB_z_Salmonella.enterica_IIIb.61:i:z_AY353335_k,z__1500 (null) 883065 1500 0 0 fljB_z_Salmonella.enterica_IIIb.48:i:z_AY353336_k,z__1500 (null) 884565 1500 0 0 fljB_z_Salmonella.enterica_IIIb.50:k:z_AY353337_k,z__1500 (null) 886065 1500 0 0 fljB_z_Salmonella.enterica_IIIb.53:z:1,5,7_AY353338_k,z__1500 (null) 887565 1500 0 0 fljB_z_Salmonella.enterica_IIIb.48:z:1,5,7_AY353339_k,z__1500 (null) 889065 1500 0 0 fljB_z35_Salmonella.enterica_Tamilnadu_AY353340_other.z35__1488 (null) 890565 1488 0 0 fljB_z35_Salmonella.enterica_Kolar_AY353341_other.z35__1488 (null) 892053 1488 0 0 fljB_z35_Salmonella.enterica_III.b.65:z52:z35_AY353342_other.z35__1488 (null) 893541 1488 0 0 fljB_z35_Salmonella.enterica_IIIb.35:z52:z35_AY353343_other.z35__1488 (null) 895029 1488 0 0 fljB_z35_Salmonella.enterica_IIIb.38:z35:z52_AY353344_other.z35__1488 (null) 896517 1488 1 0 fljB_z39_Salmonella.enterica_II.43:d:z39_AY353345_other.z39__1500 (null) 898005 1500 0 0 fljB_z39_Salmonella.enterica_II.4,12:g,m,t:z39_AY353346_other.z39__1500 (null) 899505 1500 0 0 fljB_z39_Salmonella.enterica_II.52:z39:1,5,7_AY353347_other.z39__1500 (null) 901005 1500 0 0 fljB_z39_Salmonella.enterica_II.51:l,z28:z39_AY353348_other.z39__1500 (null) 902505 1500 0 0 fljB_z39_Salmonella.enterica_II.6,7:z39:1,5,7_AY353349_other.z39__1500 (null) 904005 1500 0 0 fljB_z39_Salmonella.enterica_IIIb.40:z39:1,6_AY353350_other.z39__1500 (null) 905505 1500 0 0 fljB_z6_Salmonella.enterica_Bere_AY353352_k,z__1503 (null) 907005 1503 0 0 fljB_z6_Salmonella.enterica_Weltevreden_AY353353_k,z__1503 (null) 908508 1503 0 0 fljB_1,6_Salmonella.enterica_Poona_AY353355_1__1521 (null) 910011 1521 0 0 fljB_1,6_Anatumstr_AOZZ01000116_1__1511 (null) 911532 1511 0 0 fljB_1,6_Anatumstr_APAA01000114_1__1511 (null) 913043 1511 0 0 fljB_1,5_Bareillystr_AOZP01000315_1__1511 (null) 914554 1511 0 0 fljB_e,n,z15_Braenderupstr_AOZM01000055_e__1496 (null) 916065 1496 0 0 fljB_e,n,x_Chesterstr_AOZI01000020_e__1496 (null) 917561 1496 0 0 fljB_1,7_Gaminarastr_AOZF01000073_1__1511 (null) 919057 1511 0 0 fljB_1,7_Givestr_AOZG01000012_1__1511 (null) 920568 1511 0 0 fljB_e,n,x_Hadarstr_ARYR01000012_e__1496 (null) 922079 1496 0 0 fljB_e,n,x_Hadarstr_AOZE01000017_e__1496 (null) 923575 1496 0 0 fljB_e,n,x_Hadarstr_ABFG01000005_e__1496 (null) 925071 1496 0 0 fljB_1,2_Heidelbergstr_AMMX01000009_1__1511 (null) 926567 1511 0 0 fljB_1,2_Heidelbergstr_AMBU01000011_1__1511 (null) 928078 1511 0 0 fljB_1,2_Heidelbergstr_AMBV01000028_1__1511 (null) 929589 1511 0 0 fljB_1,2_Heidelbergstr_AMBW01000031_1__1511 (null) 931100 1511 0 0 fljB_1,2_Heidelbergstr_AMBX01000038_1__1511 (null) 932611 1511 0 0 fljB_1,2_Heidelbergstr_AMLT01000029_1__1511 (null) 934122 1511 0 0 fljB_1,2_Heidelbergstr_ABEL01000015_1__1511 (null) 935633 1511 0 0 fljB_1,7_Indianastr_AOZC01000015_1__1511 (null) 937144 1511 0 0 fljB_1,5_Infantisstr_ASRF01000034_1__1511 (null) 938655 1511 0 0 fljB_1,5_Infantisstr_ATHK01000001_1__1511 (null) 940166 1511 0 0 fljB_1,5_Infantisstr_AFYI01000002_1__1511 (null) 941677 1511 0 0 fljB_1,6_Invernessstr_AOZD01000029_1__1511 (null) 943188 1511 0 0 fljB_z6_Kentuckystr_AYDR01000034_k,z__1493 (null) 944699 1493 0 0 fljB_z6_Kentuckystr_AUQF01000002_k,z__1493 (null) 946192 1493 0 0 fljB_z6_Kentuckystr_AUQJ01000001_k,z__1493 (null) 947685 1493 0 0 fljB_z6_Kentuckystr_AUQH01000001_k,z__1493 (null) 949178 1493 0 0 fljB_z6_Kentuckystr_AHUU01000123_k,z__1493 (null) 950671 1493 0 0 fljB_z6_Kentuckystr_AOYZ01000091_k,z__1493 (null) 952164 1493 0 0 fljB_z6_Kentuckystr_AOYY01000105_k,z__1493 (null) 953657 1493 0 0 fljB_z6_Kentuckystr_ABAK02000001_k,z__1493 (null) 955150 1493 0 0 fljB_z6_Kentuckystr_AUQI01000001_k,z__1493 (null) 956643 1493 0 0 fljB_1,2_Litchfieldstr_APAN01000023_1__1511 (null) 958136 1511 0 0 fljB_1,5_Manhattanstr_CBKW010000016_1__1511 (null) 959647 1511 0 0 fljB_e,n,z15_Mbandakastr_AMRS01000032_e__1496 (null) 961158 1496 0 0 fljB_e,n,x_Minnesotastr_AOYO01000082_e__1496 (null) 962654 1496 0 0 fljB_1,2_Muenchenstr_ARYX01000100_1__1511 (null) 964150 1511 0 0 fljB_1,2_Muenchenstr_ARYW01000037_1__1511 (null) 965661 1511 0 0 fljB_1,2_Muenchenstr_AOXN01000021_1__1511 (null) 967172 1511 0 0 fljB_1,2_Muenchenstr_AOYT01000042_1__1511 (null) 968683 1511 0 0 fljB_1,2_Newportstr_AUQQ01000002_1__1511 (null) 970194 1511 0 0 fljB_1,2_Newportstr_AUQP01000016_1__1511 (null) 971705 1511 0 0 fljB_1,2_Newportstr_AYDM01000071_1__1511 (null) 973216 1511 0 0 fljB_1,2_Newportstr_AHUB01000037_1__1511 (null) 974727 1511 0 0 fljB_1,2_Newportstr_AHTP01000026_1__1511 (null) 976238 1511 0 0 fljB_1,2_Newportstr_AHTQ01000031_1__1511 (null) 977749 1511 0 0 fljB_1,2_Newportstr_AHUE01000047_1__1511 (null) 979260 1511 0 0 fljB_1,2_Newportstr_AHUF01000051_1__1511 (null) 980771 1511 0 0 fljB_1,2_Newportstr_AHTR01000013_1__1511 (null) 982282 1511 0 0 fljB_1,2_Newportstr_AHUD01000057_1__1511 (null) 983793 1511 0 0 fljB_1,2_Newportstr_AHTV01000035_1__1511 (null) 985304 1511 0 0 fljB_1,2_Newportstr_AHTL01000056_1__1511 (null) 986815 1511 0 0 fljB_1,2_Newportstr_AHTT01000014_1__1511 (null) 988326 1511 0 0 fljB_1,2_Newportstr_AHUA01000025_1__1511 (null) 989837 1511 0 0 fljB_1,2_Newportstr_AHTW01000052_1__1511 (null) 991348 1511 0 0 fljB_1,2_Newportstr_AHTU01000008_1__1511 (null) 992859 1511 0 0 fljB_1,2_Newportstr_AHTM01000016_1__1511 (null) 994370 1511 0 0 fljB_1,2_Newportstr_AHTJ01000021_1__1511 (null) 995881 1511 0 0 fljB_1,2_Newportstr_AHTN01000022_1__1511 (null) 997392 1511 0 0 fljB_1,2_Newportstr_AHTK01000007_1__1511 (null) 998903 1511 0 0 fljB_1,2_Newportstr_AHUC01000029_1__1511 (null) 1000414 1511 0 0 fljB_1,2_Newportstr_AHTZ01000054_1__1511 (null) 1001925 1511 0 0 fljB_1,2_Newportstr_AHTY01000074_1__1511 (null) 1003436 1511 0 0 fljB_1,2_Newportstr_AOGH01000019_1__1511 (null) 1004947 1511 0 0 fljB_1,2_Newportstr_AJMO01000050_1__1511 (null) 1006458 1511 0 0 fljB_1,2_Newportstr_AYEB01000020_1__1511 (null) 1007969 1511 0 0 fljB_1,2_Newportstr_AYEA01000014_1__1511 (null) 1009480 1511 0 0 fljB_1,2_Newportstr_AYDZ01000021_1__1510 (null) 1010991 1510 0 0 fljB_1,2_Newportstr_AYDY01000005_1__1511 (null) 1012501 1511 0 0 fljB_1,2_Newportstr_ABEW01000002_1__1511 (null) 1014012 1511 0 0 fljB_1,2_Newportstr_AYEI01000024_1__1511 (null) 1015523 1511 0 0 fljB_1,2_Newportstr_AYEH01000009_1__1511 (null) 1017034 1511 0 0 fljB_1,2_Newportstr_AYEG01000094_1__1511 (null) 1018545 1511 0 0 fljB_1,2_Newportstr_AYED01000019_1__1511 (null) 1020056 1511 0 0 fljB_1,2_Newportstr_AYEC01000044_1__1511 (null) 1021567 1511 0 0 fljB_1,5_Panamastr_AOYJ01000008_1__1511 (null) 1023078 1511 0 0 fljB_1,7_Pomonastr_AHIA01000072_1__1511 (null) 1024589 1511 0 0 fljB_e,n,x_Rubislawstr_AOYA01000090_e__1496 (null) 1026100 1496 0 0 fljB_1,2_Saintpaulstr_AYDS01000021_1__1511 (null) 1027596 1511 0 0 fljB_1,2_Saintpaulstr_ABAM02000001_1__1511 (null) 1029107 1511 0 0 fljB_1,2_Saintpaulstr_AOXF01000050_1__1511 (null) 1030618 1511 0 0 fljB_z6_Sloterdijkstr_AOXT01000012_k,z__1493 (null) 1032129 1493 0 0 fljB_1,2_Stanleystr_ARYV01000056_1__1511 (null) 1033622 1511 0 0 fljB_1,2_Stanleystr_AOXV01000001_1__1511 (null) 1035133 1511 0 0 fljB_1,2_Typhimuriumstr_AUQT01000077_1__1511 (null) 1036644 1511 0 0 fljB_1,2_Typhimuriumstr_AUQU01000007_1__1511 (null) 1038155 1511 0 0 fljB_1,2_Typhimuriumstr_AUQV01000001_1__1511 (null) 1039666 1511 0 0 fljB_1,2_Typhimuriumstr_AOXC01000008_1__1511 (null) 1041177 1511 0 0 fljB_1,2_Typhimuriumstr_AHUV01000080_1__1511 (null) 1042688 1511 0 0 fljB_1,2_Typhimuriumstr_AUQM01000018_1__1511 (null) 1044199 1511 0 0 fljB_1,2_Typhimuriumstr_AUQO01000019_1__1511 (null) 1045710 1511 0 0 fljB_1,2_Typhimuriumstr_AUQN01000019_1__1511 (null) 1047221 1511 0 0 fljB_1,2_Typhimuriumstr_AUQL01000023_1__1511 (null) 1048732 1511 0 0 fljB_1,2_Typhimuriumstr_AHVA01000007_1__1511 (null) 1050243 1511 0 0 fljB_1,2_Typhimuriumstr_AHUZ01000007_1__1511 (null) 1051754 1511 0 0 fljB_1,2_Typhimuriumstr_AOXO01000107_1__1511 (null) 1053265 1511 0 0 fljB_1,2_Typhimuriumstr_AJTU01000003_1__1511 (null) 1054776 1511 0 0 fljB_1,2_Typhimuriumstr_AOXD01000102_1__1511 (null) 1056287 1511 0 0 fljB_1,2_Typhimuriumstr_AMEE02000100_1__1511 (null) 1057798 1511 0 0 fljB_1,2_Typhimuriumstr_ATWR01000017_1__1511 (null) 1059309 1511 0 0 fljB_1,2_Typhimuriumstr_AMDZ02000041_1__1511 (null) 1060820 1511 0 0 fljB_1,2_Typhimuriumstr_AMEA02000051_1__1511 (null) 1062331 1511 0 0 fljB_1,2_Typhimuriumstr_AERV01000016_1__1511 (null) 1063842 1511 0 0 fljB_z6_Weltevredenstr_ABFF01000037_k,z__1493 (null) 1065353 1493 0 0 fljB_z53_IIIb.60:(k):z53_HM142067_other.z53__1497 (null) 1066846 1497 0 0 oafA__1830 (null) 1068343 1830 0 0 oafA-O-4_full__332 (null) 1070173 332 0 0 oafA-O-4_5-__325 (null) 1070505 325 0 0 sdf_I_AF370707__333 (null) 1070830 333 0 0 tyr-O-2__608 (null) 1071163 31 0 0 tyr-O-9__609 (null) 1071194 32 0 0 gntR-family-regulatory-protein_dt-negative__291 (null) 1071226 291 0 0 gntR-family-regulatory-protein_dt-positive__291 (null) 1071517 291 0 0 O:23-gene1__1029 (null) 1071808 1029 0 0 O:22-gene1__1071 (null) 1072837 1071 0 0 O:23-gene2__1146 (null) 1073908 1146 0 0 O:22-gene2__1023 (null) 1075054 1023 0 0 O:23-gene3__454 (null) 1076077 454 0 0 O:22-gene3__411 (null) 1076531 411 0 0 fljB_1,5_Bareilly_CFSAN000189__1511 (null) 1076942 1511 0 0 fljB_1,5_Idikan_SRR1272896__1511 (null) 1078453 1511 0 0 fliC_f,g_Salmonella.enterica_Adelaide_SRR1068324__1518 (null) 1079964 1518 0 0 fliC_d_Salmonella.enterica_Livingstone_SRR1299429__1521 (null) 1081482 1521 0 0 fliC_l,v_from-Nchanga_SRR1153349__1503 (null) 1083003 1503 0 0 fliC_d_from-II-48:d:z6_SRR1168371__1521 (null) 1084506 1521 0 0 fljB_z6_from-II-48:d:z6_SRR1168371__1503 (null) 1086027 1503 0 0 O-41_wzy-from-Waycross-SRR1233896__1221 (null) 1087530 1221 0 0 O-9,46_wbaV-from-II-9,12:z29:1,5-SRR1346254__1002 (null) 1088751 1002 0