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changeset 1:fae43708974d

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planemo upload
author jpayne
date Fri, 09 Nov 2018 11:30:45 -0500
parents 4ff2aee11e5b
children 15572bf93a2a
files LICENSE README.md SalmID/LICENSE SalmID/README.md SalmID/SalmID.py SalmID/__pycache__/version.cpython-36.pyc SalmID/invA_mers_dict SalmID/rpoB_mers_dict SalmID/version.py SeqSero2.py SeqSero2/H_and_O_and_specific_genes.fasta SeqSero2/Initial_Conditions.py SeqSero2/Initial_Conditions.pyc SeqSero2/LICENSE SeqSero2/README.md SeqSero2/SeqSero2_package.py SeqSero2/SeqSero2_update_kmer_database.py SeqSero2/__pycache__/Initial_Conditions.cpython-36.pyc SeqSero2/antigens.pickle SeqSero2/deinterleave_fastq.sh SeqSero2/invA_mers_dict SeqSero2/special.pickle __init__.py database/H_and_O_and_specific_genes.fasta libs/Initial_Conditions.py libs/Initial_Conditions.pyc libs/mapping_and_assembly_hybrid.py output/2018_11_09_14_19_59_temp/.bin_reads/INFO_0 output/2018_11_09_14_19_59_temp/.bin_reads/merged_0_0.seq output/2018_11_09_14_19_59_temp/.bin_reads/merged_0_1.seq output/2018_11_09_14_19_59_temp/.bin_reads/paired_0_0.seq output/2018_11_09_14_19_59_temp/.bin_reads/paired_0_1.seq output/2018_11_09_14_19_59_temp/.bin_reads/single_0_0.seq output/2018_11_09_14_19_59_temp/.bin_reads/single_0_1.seq output/2018_11_09_14_19_59_temp/K127/configs/careful_mda_mode.info output/2018_11_09_14_19_59_temp/K127/configs/careful_mode.info output/2018_11_09_14_19_59_temp/K127/configs/config.info output/2018_11_09_14_19_59_temp/K127/configs/construction.info output/2018_11_09_14_19_59_temp/K127/configs/detail_info_printer.info output/2018_11_09_14_19_59_temp/K127/configs/diploid_mode.info output/2018_11_09_14_19_59_temp/K127/configs/distance_estimation.info output/2018_11_09_14_19_59_temp/K127/configs/large_genome_mode.info output/2018_11_09_14_19_59_temp/K127/configs/mda_mode.info output/2018_11_09_14_19_59_temp/K127/configs/meta_mode.info output/2018_11_09_14_19_59_temp/K127/configs/moleculo_mode.info output/2018_11_09_14_19_59_temp/K127/configs/pe_params.info output/2018_11_09_14_19_59_temp/K127/configs/plasmid_mode.info 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