Mercurial > repos > jpayne > snp_pipeline

annotate test-data/metrics.tsv @ 58:d53281e6edae

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author jpayne
date Mon, 17 Jun 2024 02:57:10 -0400
parents eefdd97a6749
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jpayne@0 1 Sample Fastq_Files Fastq_File_Size Machine Flowcell Number_of_Reads Duplicate_Reads Percent_of_Reads_Mapped Average_Insert_Size Average_Pileup_Depth Phase1_SNPs Phase1_Preserved_SNPs Phase2_SNPs Phase2_Preserved_SNPs Missing_SNP_Matrix_Positions Missing_Preserved_SNP_Matrix_Positions Excluded_Sample Excluded_Preserved_Sample Warnings_and_Errors
jpayne@0 2 "sample1" "sample1_1.fastq, sample1_2.fastq" 4818902 20000 110 94.55 286.84 23.22 46 32 46 32 0 0
jpayne@0 3 "sample2" "sample2_1.fastq, sample2_2.fastq" 4813480 20000 98 94.78 285.90 23.22 44 41 44 41 0 0
jpayne@0 4 "sample4" "sample4_1.fastq, sample4_2.fastq" 4783620 20000 109 94.44 285.44 22.60 37 28 37 28 0 0
jpayne@0 5 "sample3" "sample3_1.fastq, sample3_2.fastq" 4774974 20000 118 94.43 284.48 22.55 38 35 38 35 0 0