Mercurial > repos > jpayne > snp_pipeline

comparison 6_merge_vcfs.xml @ 56:43d9920efbe1

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"planemo upload"
author jpayne
date Fri, 06 Nov 2020 10:05:08 -0500
parents 9b2dab492d50
children d3095ad12f24
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55:9b2dab492d50 56:43d9920efbe1
15 -n $vcf.element_identifier -f $vcf 15 -n $vcf.element_identifier -f $vcf
16 #end for 16 #end for
17 > ./file 17 > ./file
18 # need a comment here 18 # need a comment here
19 && cat ./file 19 && cat ./file
20 && cfsan_snp_pipeline merge_vcfs ./file -v 5 20 && cfsan_snp_pipeline merge_vcfs ./file
21 ]]></command> 21 ]]></command>
22 <inputs> 22 <inputs>
23 <param type="data_collection" format="vcf" collection_type="list" name="vcfs" label="List of VCFs" /> 23 <param type="data_collection" format="vcf" collection_type="list" name="vcfs" label="List of VCFs" />
24 </inputs> 24 </inputs>
25 <outputs> 25 <outputs>