Mercurial > repos > jpayne > snp_pipeline

comparison test-data/samples/sample2/metrics @ 0:eefdd97a6749

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planemo upload commit b'7f6183b769772449fbcee903686b8d5ec5b7439f\n'-dirty
author jpayne
date Wed, 24 Jan 2018 14:18:21 -0500
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-1:000000000000 0:eefdd97a6749
1 sample="sample2"
2 fastqFileList="sample2_1.fastq, sample2_2.fastq"
3 fastqFileSize=4813480
4 machine=
5 flowcell=
6 numberReads=20000
7 numberDupReads=98
8 percentReadsMapped=94.78
9 aveInsertSize=285.90
10 avePileupDepth=23.22
11 phase1Snps=44
12 phase1SnpsPreserved=41
13 snps=44
14 snpsPreserved=41
15 missingPos=0
16 missingPosPreserved=0
17 excludedSample=
18 excludedSamplePreserved=
19 errorList=""