Mercurial > repos > jpayne > snp_pipeline

diff 6_merge_vcfs.xml @ 61:2af5e948dd5c

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planemo upload
author jpayne
date Wed, 26 Jun 2024 00:58:54 -0400
parents 49d672730d3e
children d497922d6caa
line wrap: on
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--- a/6_merge_vcfs.xml	Mon Jun 24 05:10:35 2024 -0400
+++ b/6_merge_vcfs.xml	Wed Jun 26 00:58:54 2024 -0400
@@ -1,12 +1,12 @@
 <tool id="merge_vcfs" name="6. Merge VCFs" version="1.0.1" profile="16.10">
     <description>into a multi-sample VCF with consensus SNPs</description>
     <requirements>
-        <container type="docker">quay.io/biocontainers/mulled-v2-72d480da2f80e0804df2fc75273988c6dba1648d:f354c444b518b0ada8e031aa2984346e2f5d8837-0</container>
-        <!-- <requirement type="package" version="1.9">bcftools</requirement>
+        <!-- <container type="docker">quay.io/biocontainers/mulled-v2-72d480da2f80e0804df2fc75273988c6dba1648d:f354c444b518b0ada8e031aa2984346e2f5d8837-0</container> -->
+        <requirement type="package" version="1.9">bcftools</requirement>
         <requirement type="package" version="1.0.8">bzip2</requirement>
         <requirement type="package" version="2.2.1">snp-pipeline</requirement>
         <requirement type="package" version="0.2.6">tabix</requirement>
-        <requirement type="package" version="1.9">htslib</requirement> -->
+        <requirement type="package" version="1.9">htslib</requirement>
         <!-- <requirement type="package" version="3.6.8">python</requirement> -->
     </requirements>
     <command detect_errors="exit_code"><![CDATA[