Mercurial > repos > jpayne > snp_pipeline

view test-data/samples/sample4/metrics @ 42:11296a86e01b

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planemo upload commit 0399c6bd696435a7a99d8d8b4c237e5a78ee5856-dirty
author jpayne
date Thu, 08 Mar 2018 11:10:45 -0500
parents eefdd97a6749
children
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sample="sample4"
fastqFileList="sample4_1.fastq, sample4_2.fastq"
fastqFileSize=4783620
machine=
flowcell=
numberReads=20000
numberDupReads=109
percentReadsMapped=94.44
aveInsertSize=285.44
avePileupDepth=22.60
phase1Snps=37
phase1SnpsPreserved=28
snps=37
snpsPreserved=28
missingPos=0
missingPosPreserved=0
excludedSample=
excludedSamplePreserved=
errorList=""