Mercurial > repos > jpayne > snp_pipeline

view test-data/samples/sample4/metrics @ 7:13539c458a6e

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planemo upload commit b'7f6183b769772449fbcee903686b8d5ec5b7439f\n'-dirty
author jpayne
date Mon, 29 Jan 2018 16:19:16 -0500
parents eefdd97a6749
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sample="sample4"
fastqFileList="sample4_1.fastq, sample4_2.fastq"
fastqFileSize=4783620
machine=
flowcell=
numberReads=20000
numberDupReads=109
percentReadsMapped=94.44
aveInsertSize=285.44
avePileupDepth=22.60
phase1Snps=37
phase1SnpsPreserved=28
snps=37
snpsPreserved=28
missingPos=0
missingPosPreserved=0
excludedSample=
excludedSamplePreserved=
errorList=""