Mercurial > repos > jpayne > snp_pipeline

view test-data/samples/sample3/metrics @ 28:1d77f9fb51f3

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planemo upload commit 7f6183b769772449fbcee903686b8d5ec5b7439f-dirty
author jpayne
date Wed, 31 Jan 2018 13:34:32 -0500
parents eefdd97a6749
children
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sample="sample3"
fastqFileList="sample3_1.fastq, sample3_2.fastq"
fastqFileSize=4774974
machine=
flowcell=
numberReads=20000
numberDupReads=118
percentReadsMapped=94.43
aveInsertSize=284.48
avePileupDepth=22.55
phase1Snps=38
phase1SnpsPreserved=35
snps=38
snpsPreserved=35
missingPos=0
missingPosPreserved=0
excludedSample=
excludedSamplePreserved=
errorList=""