Mercurial > repos > jpayne > snp_pipeline
directory /test-data/samples/sample1/ @ 59:49d672730d3e
| name | size | permissions |
|---|---|---|
| [up] | drwxr-xr-x | |
 consensus.fasta
|
177 | -rwxr-xr-x |
|
consensus.vcf
|
19468 | -rwxr-xr-x |
|
consensus_preserved.vcf
|
17904 | -rwxr-xr-x |
|
duplicate_reads_metrics.txt
|
2921 | -rwxr-xr-x |
|
metrics
|
362 | -rwxr-xr-x |
|
reads.sam
|
7285658 | -rwxr-xr-x |
|
reads.sorted.bam
|
2540773 | -rwxr-xr-x |
|
reads.sorted.deduped.bam
|
2561179 | -rwxr-xr-x |
|
reads.unsorted.bam
|
3069427 | -rwxr-xr-x |
|
sample1_1.fastq
|
2411686 | -rwxr-xr-x |
|
sample1_1.fastq.gz
|
1286749 | -rwxr-xr-x |
|
sample1_2.fastq
|
2407216 | -rwxr-xr-x |
|
sample1_2.fastq.gz
|
1283990 | -rwxr-xr-x |
|
var.flt.vcf
|
10308 | -rwxr-xr-x |
|
var.flt_preserved.vcf
|
8724 | -rwxr-xr-x |
|
var.flt_removed.vcf
|
4626 | -rwxr-xr-x |