Mercurial > repos > jpayne > snp_pipeline

view test-data/samples/sample3/metrics @ 59:49d672730d3e

Find changesets by keywords (author, files, the commit message), revision number or hash, or revset expression.
planemo upload
author jpayne
date Mon, 17 Jun 2024 23:57:13 -0400
parents eefdd97a6749
children
line wrap: on
line source
sample="sample3"
fastqFileList="sample3_1.fastq, sample3_2.fastq"
fastqFileSize=4774974
machine=
flowcell=
numberReads=20000
numberDupReads=118
percentReadsMapped=94.43
aveInsertSize=284.48
avePileupDepth=22.55
phase1Snps=38
phase1SnpsPreserved=35
snps=38
snpsPreserved=35
missingPos=0
missingPosPreserved=0
excludedSample=
excludedSamplePreserved=
errorList=""