Mercurial > repos > jpayne > snp_pipeline

view test-data/samples/sample2/metrics @ 3:5830791e73af

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planemo upload commit b'7f6183b769772449fbcee903686b8d5ec5b7439f\n'-dirty
author jpayne
date Wed, 24 Jan 2018 15:09:32 -0500
parents eefdd97a6749
children
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sample="sample2"
fastqFileList="sample2_1.fastq, sample2_2.fastq"
fastqFileSize=4813480
machine=
flowcell=
numberReads=20000
numberDupReads=98
percentReadsMapped=94.78
aveInsertSize=285.90
avePileupDepth=23.22
phase1Snps=44
phase1SnpsPreserved=41
snps=44
snpsPreserved=41
missingPos=0
missingPosPreserved=0
excludedSample=
excludedSamplePreserved=
errorList=""