Mercurial > repos > jpayne > snp_pipeline
directory /test-data/samples/sample2/ @ 43:62531f7399dc
| name | size | permissions |
|---|---|---|
| [up] | drwxr-xr-x | |
 consensus.fasta
|
177 | -rw-r--r-- |
|
consensus.vcf
|
19486 | -rw-r--r-- |
|
consensus_preserved.fasta
|
148 | -rw-r--r-- |
|
consensus_preserved.vcf
|
16703 | -rw-r--r-- |
|
duplicate_reads_metrics.txt
|
2923 | -rw-r--r-- |
|
metrics
|
361 | -rw-r--r-- |
|
reads.all.pileup
|
4259620 | -rw-r--r-- |
|
reads.sam
|
7285152 | -rw-r--r-- |
|
reads.sorted.bam
|
2546947 | -rw-r--r-- |
|
reads.sorted.deduped.bam
|
2566142 | -rw-r--r-- |
|
reads.unsorted.bam
|
3073100 | -rw-r--r-- |
|
sample2_1.fastq
|
2418454 | -rw-r--r-- |
|
sample2_2.fastq
|
2395026 | -rw-r--r-- |
|
var.flt.vcf
|
9976 | -rw-r--r-- |
|
var.flt_preserved.vcf
|
9454 | -rw-r--r-- |
|
var.flt_removed.vcf
|
2678 | -rw-r--r-- |