Mercurial > repos > jpayne > snp_pipeline
directory /test-data/samples/sample3/ @ 0:eefdd97a6749
| name | size | permissions |
|---|---|---|
| [up] | drwxr-xr-x | |
 consensus.fasta
|
177 | -rw-r--r-- |
|
consensus.vcf
|
19464 | -rw-r--r-- |
|
consensus_preserved.fasta
|
148 | -rw-r--r-- |
|
consensus_preserved.vcf
|
16671 | -rw-r--r-- |
|
duplicate_reads_metrics.txt
|
2920 | -rw-r--r-- |
|
metrics
|
362 | -rw-r--r-- |
|
reads.all.pileup
|
4193444 | -rw-r--r-- |
|
reads.sam
|
7242946 | -rw-r--r-- |
|
reads.sorted.bam
|
2518787 | -rw-r--r-- |
|
reads.sorted.deduped.bam
|
2537579 | -rw-r--r-- |
|
reads.unsorted.bam
|
3037813 | -rw-r--r-- |
|
sample3_1.fastq
|
2389868 | -rw-r--r-- |
|
sample3_2.fastq
|
2385106 | -rw-r--r-- |
|
var.flt.vcf
|
8889 | -rw-r--r-- |
|
var.flt_preserved.vcf
|
8363 | -rw-r--r-- |
|
var.flt_removed.vcf
|
2682 | -rw-r--r-- |